CmoCh19G003530 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh19G003530
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr19: 3046402 .. 3048523 (-)
RNA-Seq ExpressionCmoCh19G003530
SyntenyCmoCh19G003530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGCCGGAACTGAAGCACATGCACTGGGTGATTCGGCTGCTAGAGCTCAAAGTTGAACCCATCTTAGGGTTTATTCGGGCTTCCCTTGGATTGAACTGCACCAAGCAGCATACAAGCCCGCCAGAATACTTCAGATTCCAATCAATGGTGTTTCTTTTTGTAGATTGATTCGTGTTTTTTTTTTTTTTTTTCTTGCTCGAGATTGTTACTCGTACAGTTATCGTGATTCGGTTCTGTTAATATGGTGCACTGAAGGCTGCGGAGTAGAAATCATCGGGTCCCATGGGAGGATGTTAAGCTTCACAATCTTGTACTCAATATCTCAATAGCTGAGCTTCAAAGGTATTACTTTCCACCTACCTCCACCTCATCCTTCTACTGATGTGCTCGTCCTGTTCGATTTGATTTTCATTGTCCTGTTCGATTTGATTTTCATTGTCTGCTAATCTCTAAATAATAGTTTTGAATGGATTGTATTTTGATTTTATTTTATTGACAGGCCGTAATTGTTTTGTTTGATTTCTTTCTATTAGAACGCGAAGATCCGTTTTTCGAGCTGATGGAATTGGTCGAATTCCAAAAATTCAAATCATGATTATTATAAATTCTTGATGTTTATTCGTTGTTAATGTTTTTTCTTTGCTTGAATCATTTTATCTAATTTTTTCATATTTTTACCTGTTTTCTTGTCCCATTCACTTACGGATTTTGGCAGGTTTTGGCTCTTAAATTGATCATATATCTCAAAAGAATGGTCTCCAAATATTCTACAAAGTTTTTGAATATTTGTGTCGCTTCATTCTGTAAATCTCAGCAAATGCAGAAAGCTGAAGATGTAATAATAGATGGCATAAGGTTAGGAGTTCTCCCGGATGTAGTGACTTACAATACATTGATTGATGGATATTGTCGATTTAGTGGCGTGGATACTGCTTATTCAGTTCTTTATAGAATGAGGGAAGCTGGTATAAGCCCAGATGTCATTACTTATAATTCTTTGATAGCTGGGGCATCCAGGAATCGCTCATTAGAACAGTCCCTTGATTTGTTCGAAGAAATGCTTCAATCGGGTATCACTCCTGATATATGGAGTTACAACACTTTGATGCACTGTTTATTCAGATTAGGAAAGCCAGATGAAGCCAATCGAATTTTCAAGGATATCATACTTAAGGGCCTCTCTCCTCATCCCGTTACATTTAATACTATGATTAACGGCCTTTGTAAATATGGGTATACAAGTAATGCCATTATGTTATTCAGAAATTTACAGCGTCACGGATTCGTTCCTCAATTAGTTACATATAATATTCTTATTAATGGTCTTTGCAAGGTGGGTAGGATGAGGGCTGCTAGGAGGATGCTCAATGAGGCCATGGATTCAGGTCTTGAGCCTAATGCTGTAACATACACTACATTGATGAAAAGCTGCTTTCGATGTAGGCAATATAAACATGGATTTGAGATTTTTTTTGAGATGAAAAACAGAGGATATGCGTTTGATGGATTTGCCTACTGCACAGTTATTGGTGCTTTTCTTAAGTTAGGTAGGTTTGAAGAAGCAAATGTTTGCATGGAACAAATGATAAAAAATGGTTTGGGATTTGATTTAGTTTTCTATAATACTTTTATTAATTTGTACTGTAAAGAAGGTAAGTTGGAGGCTGCATATAAGATGCTGGATGAGCTAGAGTCACAGGGACTAGAATACGATGACTACACACATTCTATAATAACTGATGGGTTGTGCAGGAATGGTAATATTGAGGGGGCCTGGCGACATTTGAACTACATGTATACAACAGGTTTTGTTTCAAACTCGGTAGCCTTAAATTGTCTAATTGAAAGGTTGGGTAAGGCTGGACAGATTGACCATGCGATGAAATTGTTTGAATCAATGGAAATAAGAGATTCGTTTGCCTATACATCCTTGGTGCACAATCTTTGCAAGGCAAGGAGGTTCCGTTGTGCGTCAAGGTTATTAATTTCGTGTATAAAAGGTGGCATGAAGGTTCTCAAGTCCACACGACGAACAGTTATTGATGGTCTTATTTCTTCAGGGTATACAAGTGAAGCAGGGAAGGTCAGATCAAAATTACGAATGGCTCGACTCTTTCACTGA

mRNA sequence

GGGCCGGAACTGAAGCACATGCACTGGGTGATTCGGCTGCTAGAGCTCAAAGTTGAACCCATCTTAGGGTTTATTCGGGCTTCCCTTGGATTGAACTGCACCAAGCAGCATACAAGCCCGCCAGAATACTTCAGATTCCAATCAATGGTTTTGGCTCTTAAATTGATCATATATCTCAAAAGAATGGTCTCCAAATATTCTACAAAGTTTTTGAATATTTGTGTCGCTTCATTCTGTAAATCTCAGCAAATGCAGAAAGCTGAAGATGTAATAATAGATGGCATAAGGTTAGGAGTTCTCCCGGATGTAGTGACTTACAATACATTGATTGATGGATATTGTCGATTTAGTGGCGTGGATACTGCTTATTCAGTTCTTTATAGAATGAGGGAAGCTGGTATAAGCCCAGATGTCATTACTTATAATTCTTTGATAGCTGGGGCATCCAGGAATCGCTCATTAGAACAGTCCCTTGATTTGTTCGAAGAAATGCTTCAATCGGGTATCACTCCTGATATATGGAGTTACAACACTTTGATGCACTGTTTATTCAGATTAGGAAAGCCAGATGAAGCCAATCGAATTTTCAAGGATATCATACTTAAGGGCCTCTCTCCTCATCCCGTTACATTTAATACTATGATTAACGGCCTTTGTAAATATGGGTATACAAGTAATGCCATTATGTTATTCAGAAATTTACAGCGTCACGGATTCGTTCCTCAATTAGTTACATATAATATTCTTATTAATGGTCTTTGCAAGGTGGGTAGGATGAGGGCTGCTAGGAGGATGCTCAATGAGGCCATGGATTCAGGTCTTGAGCCTAATGCTGTAACATACACTACATTGATGAAAAGCTGCTTTCGATGTAGGCAATATAAACATGGATTTGAGATTTTTTTTGAGATGAAAAACAGAGGATATGCGTTTGATGGATTTGCCTACTGCACAGTTATTGGTGCTTTTCTTAAGTTAGGTAGGTTTGAAGAAGCAAATGTTTGCATGGAACAAATGATAAAAAATGGTTTGGGATTTGATTTAGTTTTCTATAATACTTTTATTAATTTGTACTGTAAAGAAGGTAAGTTGGAGGCTGCATATAAGATGCTGGATGAGCTAGAGTCACAGGGACTAGAATACGATGACTACACACATTCTATAATAACTGATGGGTTGTGCAGGAATGGTAATATTGAGGGGGCCTGGCGACATTTGAACTACATGTATACAACAGGTTTTGTTTCAAACTCGGTAGCCTTAAATTGTCTAATTGAAAGGTTGGGTAAGGCTGGACAGATTGACCATGCGATGAAATTGTTTGAATCAATGGAAATAAGAGATTCGTTTGCCTATACATCCTTGGTGCACAATCTTTGCAAGGCAAGGAGGTTCCGTTGTGCGTCAAGGTTATTAATTTCGTGTATAAAAGGTGGCATGAAGGTTCTCAAGTCCACACGACGAACAGTTATTGATGGTCTTATTTCTTCAGGGTATACAAGTGAAGCAGGGAAGGTCAGATCAAAATTACGAATGGCTCGACTCTTTCACTGA

Coding sequence (CDS)

ATGCACTGGGTGATTCGGCTGCTAGAGCTCAAAGTTGAACCCATCTTAGGGTTTATTCGGGCTTCCCTTGGATTGAACTGCACCAAGCAGCATACAAGCCCGCCAGAATACTTCAGATTCCAATCAATGGTTTTGGCTCTTAAATTGATCATATATCTCAAAAGAATGGTCTCCAAATATTCTACAAAGTTTTTGAATATTTGTGTCGCTTCATTCTGTAAATCTCAGCAAATGCAGAAAGCTGAAGATGTAATAATAGATGGCATAAGGTTAGGAGTTCTCCCGGATGTAGTGACTTACAATACATTGATTGATGGATATTGTCGATTTAGTGGCGTGGATACTGCTTATTCAGTTCTTTATAGAATGAGGGAAGCTGGTATAAGCCCAGATGTCATTACTTATAATTCTTTGATAGCTGGGGCATCCAGGAATCGCTCATTAGAACAGTCCCTTGATTTGTTCGAAGAAATGCTTCAATCGGGTATCACTCCTGATATATGGAGTTACAACACTTTGATGCACTGTTTATTCAGATTAGGAAAGCCAGATGAAGCCAATCGAATTTTCAAGGATATCATACTTAAGGGCCTCTCTCCTCATCCCGTTACATTTAATACTATGATTAACGGCCTTTGTAAATATGGGTATACAAGTAATGCCATTATGTTATTCAGAAATTTACAGCGTCACGGATTCGTTCCTCAATTAGTTACATATAATATTCTTATTAATGGTCTTTGCAAGGTGGGTAGGATGAGGGCTGCTAGGAGGATGCTCAATGAGGCCATGGATTCAGGTCTTGAGCCTAATGCTGTAACATACACTACATTGATGAAAAGCTGCTTTCGATGTAGGCAATATAAACATGGATTTGAGATTTTTTTTGAGATGAAAAACAGAGGATATGCGTTTGATGGATTTGCCTACTGCACAGTTATTGGTGCTTTTCTTAAGTTAGGTAGGTTTGAAGAAGCAAATGTTTGCATGGAACAAATGATAAAAAATGGTTTGGGATTTGATTTAGTTTTCTATAATACTTTTATTAATTTGTACTGTAAAGAAGGTAAGTTGGAGGCTGCATATAAGATGCTGGATGAGCTAGAGTCACAGGGACTAGAATACGATGACTACACACATTCTATAATAACTGATGGGTTGTGCAGGAATGGTAATATTGAGGGGGCCTGGCGACATTTGAACTACATGTATACAACAGGTTTTGTTTCAAACTCGGTAGCCTTAAATTGTCTAATTGAAAGGTTGGGTAAGGCTGGACAGATTGACCATGCGATGAAATTGTTTGAATCAATGGAAATAAGAGATTCGTTTGCCTATACATCCTTGGTGCACAATCTTTGCAAGGCAAGGAGGTTCCGTTGTGCGTCAAGGTTATTAATTTCGTGTATAAAAGGTGGCATGAAGGTTCTCAAGTCCACACGACGAACAGTTATTGATGGTCTTATTTCTTCAGGGTATACAAGTGAAGCAGGGAAGGTCAGATCAAAATTACGAATGGCTCGACTCTTTCACTGA

Protein sequence

MHWVIRLLELKVEPILGFIRASLGLNCTKQHTSPPEYFRFQSMVLALKLIIYLKRMVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGVDTAYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMHCLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVPQLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHGFEIFFEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFYNTFINLYCKEGKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVALNCLIERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCKARRFRCASRLLISCIKGGMKVLKSTRRTVIDGLISSGYTSEAGKVRSKLRMARLFH
Homology
BLAST of CmoCh19G003530 vs. ExPASy Swiss-Prot
Match: P0C043 (Putative pentatricopeptide repeat-containing protein At4g17915 OS=Arabidopsis thaliana OX=3702 GN=At4g17915 PE=3 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 4.1e-135
Identity = 236/447 (52.80%), Postives = 316/447 (70.69%), Query Frame = 0

Query: 61  STKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGVDTAYSVL 120
           ST+ LNICV S CK ++++KAE +IIDGIRLGV PDVVTYNTLI GYCRF G++ AY+V 
Sbjct: 12  STRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVT 71

Query: 121 YRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMHCLFRL 180
            RMR+AGI PDV TYNSLIAGA+R   L+  L LF+EML+ GI PD+WSYNTLM C F+L
Sbjct: 72  RRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKL 131

Query: 181 GKPDEANRI-FKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVPQLVT 240
           GK +EA R+ +KD+ L GL+P P T+N +++ LCK GY  NA+ LF+ +Q   F P+L+T
Sbjct: 132 GKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSR-FKPELMT 191

Query: 241 YNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHGFEIFFEMK 300
           YNILINGLCK  R+  A+ ML E   SG  PNAVTYTT++K  F+ R+ + G ++F EMK
Sbjct: 192 YNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMK 251

Query: 301 NRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFYNTFINLYCKEGKLE 360
             GY +DG+AY  V+ A +K GR +EA   M+++++ G   D+V YNT +NLY K+G L+
Sbjct: 252 REGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLD 311

Query: 361 AAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVALNCLI 420
           A   +L E+E +G++ D+YTH+II +GL R G    A  H   M   G   N V  NCL+
Sbjct: 312 AVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLVTCNCLV 371

Query: 421 ERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCKARRFRCASRLLISCIKGGMKVLKS 480
           + L KAG +D AM+ FESME++D + YTS+VHNLCK  RF CAS+LL+SC   G+K+  S
Sbjct: 372 DGLCKAGHVDRAMRYFESMEVKDEYTYTSVVHNLCKDMRFVCASKLLLSCYNKGIKIPTS 431

Query: 481 TRRTVIDGLISSGYTSEAGKVRSKLRM 507
            RR V+ GL  SG   EA K ++++++
Sbjct: 432 ARRAVLSGLRMSGCYGEARKAKAEMKL 457

BLAST of CmoCh19G003530 vs. ExPASy Swiss-Prot
Match: Q56XR6 (Pentatricopeptide repeat-containing protein At5g46680 OS=Arabidopsis thaliana OX=3702 GN=At5g46680 PE=2 SV=2)

HSP 1 Score: 466.8 bits (1200), Expect = 3.0e-130
Identity = 235/449 (52.34%), Postives = 312/449 (69.49%), Query Frame = 0

Query: 61  STKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGVDTAYSVL 120
           STK LNI V S CK + +++AE ++IDGIRLGVLPDV+TYNTLI GY RF G+D AY+V 
Sbjct: 12  STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVT 71

Query: 121 YRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMHCLFRL 180
            RMREAGI PDV TYNSLI+GA++N  L + L LF+EML SG++PD+WSYNTLM C F+L
Sbjct: 72  RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131

Query: 181 GKPDEANRIF-KDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVPQLVT 240
           G+  EA +I  +DI L GL P   T+N +++ LCK G+T NAI LF++L+     P+L+T
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMT 191

Query: 241 YNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHGFEIFFEMK 300
           YNILINGLCK  R+ +   M+ E   SG  PNAVTYTT++K  F+ ++ + G ++F +MK
Sbjct: 192 YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 251

Query: 301 NRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGL-GFDLVFYNTFINLYCKEGKL 360
             GY FDGFA C V+ A +K GR EEA  CM +++++G    D+V YNT +NLY K+G L
Sbjct: 252 KEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL 311

Query: 361 EAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVALNCL 420
           +A   +L+E+E +GL+ DDYTH+II +GL   GN  GA +HL  +   G   + V  NCL
Sbjct: 312 DAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCL 371

Query: 421 IERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCKARRFRCASRLLISCIKGGMKVLK 480
           I+ L KAG +D AM+LF SME+RD F YTS+VHNLCK  R  CAS+LL+SC   GMK+  
Sbjct: 372 IDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPS 431

Query: 481 STRRTVIDGLISSGYTSEAGKVRSKLRMA 508
           S RR V+ G+  +     A K   K++ A
Sbjct: 432 SARRAVLSGIRETVSYQAARKTHIKIKAA 459

BLAST of CmoCh19G003530 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.1e-59
Identity = 133/444 (29.95%), Postives = 239/444 (53.83%), Query Frame = 0

Query: 69  VASFCKSQQMQKAEDV--IIDGIRLGVLPDVVTYNTLIDGYCRFSGVDTAYSVLYRMREA 128
           +  FC+  + +KA  +  I++G   G +PDV+TYN +I GYC+   ++ A SVL RM   
Sbjct: 144 IRGFCRLGKTRKAAKILEILEG--SGAVPDVITYNVMISGYCKAGEINNALSVLDRM--- 203

Query: 129 GISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMHCLFRLGKPDEA 188
            +SPDV+TYN+++     +  L+Q++++ + MLQ    PD+ +Y  L+    R      A
Sbjct: 204 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 263

Query: 189 NRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVPQLVTYNILING 248
            ++  ++  +G +P  VT+N ++NG+CK G    AI    ++   G  P ++T+NI++  
Sbjct: 264 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 323

Query: 249 LCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHG--FEIFFEMKNRGYA 308
           +C  GR   A ++L + +  G  P+ VT+  L+   F CR+   G   +I  +M   G  
Sbjct: 324 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN--FLCRKGLLGRAIDILEKMPQHGCQ 383

Query: 309 FDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFYNTFINLYCKEGKLEAAYKM 368
            +  +Y  ++  F K  + + A   +E+M+  G   D+V YNT +   CK+GK+E A ++
Sbjct: 384 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 443

Query: 369 LDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVALNCLIERLGK 428
           L++L S+G      T++ + DGL + G    A + L+ M       +++  + L+  L +
Sbjct: 444 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 503

Query: 429 AGQIDHAMKL---FESMEIR-DSFAYTSLVHNLCKARRFRCASRLLISCIKGGMKVLKST 488
            G++D A+K    FE M IR ++  + S++  LCK+R+   A   L+  I  G K  +++
Sbjct: 504 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 563

Query: 489 RRTVIDGLISSGYTSEAGKVRSKL 505
              +I+GL   G   EA ++ ++L
Sbjct: 564 YTILIEGLAYEGMAKEALELLNEL 580

BLAST of CmoCh19G003530 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.9e-58
Identity = 119/412 (28.88%), Postives = 214/412 (51.94%), Query Frame = 0

Query: 46  ALKLIIYLKRMVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLID 105
           A+ L+  +  M  K  T      +       +  +A  ++   ++ G  PD+VTY T+++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231

Query: 106 GYCRFSGVDTAYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITP 165
           G C+   +D A S+L +M +  I  DV+ YN++I G  + + ++ +L+LF EM   GI P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291

Query: 166 DIWSYNTLMHCLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLF 225
           D+++Y++L+ CL   G+  +A+R+  D+I + ++P+ VTF+ +I+   K G    A  L+
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351

Query: 226 RNLQRHGFVPQLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRC 285
             + +    P + TY+ LING C   R+  A+ M    +     PN VTY+TL+K   + 
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411

Query: 286 RQYKHGFEIFFEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFY 345
           ++ + G E+F EM  RG   +   Y T+I  F +    + A +  +QM+  G+  +++ Y
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471

Query: 346 NTFINLYCKEGKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYT 405
           N  ++  CK GKL  A  + + L+   +E D YT++I+ +G+C+ G +E  W     +  
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531

Query: 406 TGFVSNSVALNCLIERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCKAR 458
            G   N +A N +I    + G  + A  L + M+       +   + L +AR
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583

BLAST of CmoCh19G003530 vs. ExPASy Swiss-Prot
Match: Q9ZUA2 (Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana OX=3702 GN=At2g01740 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.4e-57
Identity = 145/465 (31.18%), Postives = 238/465 (51.18%), Query Frame = 0

Query: 44  VLALKLIIYL-KRMVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNT 103
           +L+LK + YL  R  + + + F N  V+  CK  Q++ AED++    R G  PDV++YN+
Sbjct: 38  ILSLKFLAYLVSRGYTPHRSSF-NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNS 97

Query: 104 LIDGYCRFSGVDTAYSVLYRMREAG---ISPDVITYNSLIAGASRNRSLEQSLDLFEEML 163
           LIDG+CR   + +A  VL  +R +      PD++++NSL  G S+ + L++       ML
Sbjct: 98  LIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML 157

Query: 164 QSGITPDIWSYNTLMHCLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTS 223
           +   +P++ +Y+T +    + G+   A + F  +    LSP+ VTF  +I+G CK G   
Sbjct: 158 KC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLE 217

Query: 224 NAIMLFRNLQRHGFVPQLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLM 283
            A+ L++ ++R      +VTY  LI+G CK G M+ A  M +  ++  +EPN++ YTT++
Sbjct: 218 VAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII 277

Query: 284 KSCFRCRQYKHGFEIFFEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLG 343
              F+     +  +   +M N+G   D  AY  +I      G+ +EA   +E M K+ L 
Sbjct: 278 DGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 337

Query: 344 FDLVFYNTFINLYCKEGKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRH 403
            D+V + T +N Y K G+++AA  M  +L  +G E D    S + DG+ +NG +     H
Sbjct: 338 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL-----H 397

Query: 404 LNYMYTTGFVSNSVALNCLIERLGKAGQIDHAMKLFESME----IRDSFAYTSLVHNLCK 463
              +Y     +N V    LI+ L K G      +LF  +     + D F YTS +  LCK
Sbjct: 398 EAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCK 457

Query: 464 ARRFRCASRLLISCIKGGMKVLKSTRRTVIDGLISSGYTSEAGKV 501
                 A +L    ++ G+ +      T+I GL S G   EA +V
Sbjct: 458 QGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQV 495

BLAST of CmoCh19G003530 vs. ExPASy TrEMBL
Match: A0A6J1EXR2 (putative pentatricopeptide repeat-containing protein At4g17915 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439553 PE=4 SV=1)

HSP 1 Score: 931.0 bits (2405), Expect = 2.1e-267
Identity = 456/456 (100.00%), Postives = 456/456 (100.00%), Query Frame = 0

Query: 56  MVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGVDT 115
           MVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGVDT
Sbjct: 1   MVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGVDT 60

Query: 116 AYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMH 175
           AYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMH
Sbjct: 61  AYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMH 120

Query: 176 CLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP 235
           CLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP
Sbjct: 121 CLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP 180

Query: 236 QLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHGFEIF 295
           QLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHGFEIF
Sbjct: 181 QLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHGFEIF 240

Query: 296 FEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFYNTFINLYCKE 355
           FEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFYNTFINLYCKE
Sbjct: 241 FEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFYNTFINLYCKE 300

Query: 356 GKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVAL 415
           GKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVAL
Sbjct: 301 GKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVAL 360

Query: 416 NCLIERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCKARRFRCASRLLISCIKGGMK 475
           NCLIERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCKARRFRCASRLLISCIKGGMK
Sbjct: 361 NCLIERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCKARRFRCASRLLISCIKGGMK 420

Query: 476 VLKSTRRTVIDGLISSGYTSEAGKVRSKLRMARLFH 512
           VLKSTRRTVIDGLISSGYTSEAGKVRSKLRMARLFH
Sbjct: 421 VLKSTRRTVIDGLISSGYTSEAGKVRSKLRMARLFH 456

BLAST of CmoCh19G003530 vs. ExPASy TrEMBL
Match: A0A6J1IFW8 (putative pentatricopeptide repeat-containing protein At4g17915 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472462 PE=4 SV=1)

HSP 1 Score: 891.7 bits (2303), Expect = 1.4e-255
Identity = 435/456 (95.39%), Postives = 444/456 (97.37%), Query Frame = 0

Query: 56  MVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGVDT 115
           MVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSG+D 
Sbjct: 1   MVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGMDA 60

Query: 116 AYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMH 175
           AYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMH
Sbjct: 61  AYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMH 120

Query: 176 CLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP 235
           CLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP
Sbjct: 121 CLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP 180

Query: 236 QLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHGFEIF 295
           QLVTYNILINGLCKVGRM+AA RMLNEAMDSGLEP AVTYTTLMKSCFRCRQYKHGFEIF
Sbjct: 181 QLVTYNILINGLCKVGRMKAAWRMLNEAMDSGLEPGAVTYTTLMKSCFRCRQYKHGFEIF 240

Query: 296 FEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFYNTFINLYCKE 355
           FEMKN+GYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMI+NGLG DLVFYNT INLYCKE
Sbjct: 241 FEMKNKGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIRNGLGIDLVFYNTLINLYCKE 300

Query: 356 GKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVAL 415
           GKLEAAYK+LDELES GLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGF SN VAL
Sbjct: 301 GKLEAAYKLLDELESLGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFTSNLVAL 360

Query: 416 NCLIERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCKARRFRCASRLLISCIKGGMK 475
           NCLI+RLGKAGQIDHAMKLFESMEIRDS  YTSLVHNLCKARRFRCAS+LLISCIKGGMK
Sbjct: 361 NCLIDRLGKAGQIDHAMKLFESMEIRDSITYTSLVHNLCKARRFRCASKLLISCIKGGMK 420

Query: 476 VLKSTRRTVIDGLISSGYTSEAGKVRSKLRMARLFH 512
           VLKST+RTVIDGL SSG+TSEA KVRSKLRMARLFH
Sbjct: 421 VLKSTQRTVIDGLRSSGFTSEARKVRSKLRMARLFH 456

BLAST of CmoCh19G003530 vs. ExPASy TrEMBL
Match: A0A6J1D2P0 (putative pentatricopeptide repeat-containing protein At4g17915 OS=Momordica charantia OX=3673 GN=LOC111016743 PE=4 SV=1)

HSP 1 Score: 828.9 bits (2140), Expect = 1.1e-236
Identity = 398/456 (87.28%), Postives = 431/456 (94.52%), Query Frame = 0

Query: 56  MVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGVDT 115
           MV K+STKFLNICVAS+CKS+QMQKAE VIIDGIRLGVLPDVVTYNTL+DGYCRF G+D 
Sbjct: 1   MVCKFSTKFLNICVASYCKSRQMQKAEAVIIDGIRLGVLPDVVTYNTLLDGYCRFIGMDA 60

Query: 116 AYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMH 175
           AYSV+YRMREAGISPDVITYNSLIAGA+RN SLEQSLDLFEEMLQSGITPDIWSYNTLMH
Sbjct: 61  AYSVIYRMREAGISPDVITYNSLIAGATRNCSLEQSLDLFEEMLQSGITPDIWSYNTLMH 120

Query: 176 CLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP 235
           C FRLGKPDEANR+FKDIILK LSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP
Sbjct: 121 CFFRLGKPDEANRVFKDIILKDLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP 180

Query: 236 QLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHGFEIF 295
           QLVTYNILINGLCKVGR++AARRMLNEA DSGLEP+A+TYTTLMKSC R RQYKHGFEIF
Sbjct: 181 QLVTYNILINGLCKVGRLKAARRMLNEARDSGLEPDAITYTTLMKSCLRSRQYKHGFEIF 240

Query: 296 FEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFYNTFINLYCKE 355
           FEMKN+GYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMI+N +G DLVFYNTFI+LYCKE
Sbjct: 241 FEMKNKGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIRNRMGIDLVFYNTFIHLYCKE 300

Query: 356 GKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVAL 415
           GKL+AAYK+LDE+ES+GLE+D+YTH+IITDGLCR GNI+GA RHLNYMYTTG  SN V L
Sbjct: 301 GKLDAAYKLLDEIESRGLEFDNYTHTIITDGLCRAGNIDGARRHLNYMYTTGLASNLVPL 360

Query: 416 NCLIERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCKARRFRCASRLLISCIKGGMK 475
           NCLI+RL KAGQIDHAMKLFESME RDSF YTSLVHNLCKARRFRCAS+LL+SCI+GGMK
Sbjct: 361 NCLIDRLCKAGQIDHAMKLFESMETRDSFTYTSLVHNLCKARRFRCASKLLLSCIRGGMK 420

Query: 476 VLKSTRRTVIDGLISSGYTSEAGKVRSKLRMARLFH 512
           VLKST+R VIDGL SSG+TSEA K++SKL +ARLFH
Sbjct: 421 VLKSTQRAVIDGLCSSGFTSEARKLKSKLHLARLFH 456

BLAST of CmoCh19G003530 vs. ExPASy TrEMBL
Match: A0A6J1EY55 (putative pentatricopeptide repeat-containing protein At4g17915 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439553 PE=4 SV=1)

HSP 1 Score: 825.5 bits (2131), Expect = 1.2e-235
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0

Query: 56  MVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGVDT 115
           MVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGVDT
Sbjct: 1   MVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGVDT 60

Query: 116 AYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMH 175
           AYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMH
Sbjct: 61  AYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMH 120

Query: 176 CLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP 235
           CLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP
Sbjct: 121 CLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP 180

Query: 236 QLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHGFEIF 295
           QLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHGFEIF
Sbjct: 181 QLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHGFEIF 240

Query: 296 FEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFYNTFINLYCKE 355
           FEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFYNTFINLYCKE
Sbjct: 241 FEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFYNTFINLYCKE 300

Query: 356 GKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVAL 415
           GKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVAL
Sbjct: 301 GKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVAL 360

Query: 416 NCLIERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCK 456
           NCLIERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCK
Sbjct: 361 NCLIERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCK 400

BLAST of CmoCh19G003530 vs. ExPASy TrEMBL
Match: A0A6J1ICF9 (putative pentatricopeptide repeat-containing protein At4g17915 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472462 PE=4 SV=1)

HSP 1 Score: 796.2 bits (2055), Expect = 8.1e-227
Identity = 384/400 (96.00%), Postives = 390/400 (97.50%), Query Frame = 0

Query: 56  MVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGVDT 115
           MVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSG+D 
Sbjct: 1   MVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGMDA 60

Query: 116 AYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMH 175
           AYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMH
Sbjct: 61  AYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMH 120

Query: 176 CLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP 235
           CLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP
Sbjct: 121 CLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVP 180

Query: 236 QLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHGFEIF 295
           QLVTYNILINGLCKVGRM+AA RMLNEAMDSGLEP AVTYTTLMKSCFRCRQYKHGFEIF
Sbjct: 181 QLVTYNILINGLCKVGRMKAAWRMLNEAMDSGLEPGAVTYTTLMKSCFRCRQYKHGFEIF 240

Query: 296 FEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFYNTFINLYCKE 355
           FEMKN+GYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMI+NGLG DLVFYNT INLYCKE
Sbjct: 241 FEMKNKGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIRNGLGIDLVFYNTLINLYCKE 300

Query: 356 GKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVAL 415
           GKLEAAYK+LDELES GLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGF SN VAL
Sbjct: 301 GKLEAAYKLLDELESLGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFTSNLVAL 360

Query: 416 NCLIERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCK 456
           NCLI+RLGKAGQIDHAMKLFESMEIRDS  YTSLVHNLCK
Sbjct: 361 NCLIDRLGKAGQIDHAMKLFESMEIRDSITYTSLVHNLCK 400

BLAST of CmoCh19G003530 vs. TAIR 10
Match: AT5G46680.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 466.8 bits (1200), Expect = 2.2e-131
Identity = 235/449 (52.34%), Postives = 312/449 (69.49%), Query Frame = 0

Query: 61  STKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGVDTAYSVL 120
           STK LNI V S CK + +++AE ++IDGIRLGVLPDV+TYNTLI GY RF G+D AY+V 
Sbjct: 12  STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVT 71

Query: 121 YRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMHCLFRL 180
            RMREAGI PDV TYNSLI+GA++N  L + L LF+EML SG++PD+WSYNTLM C F+L
Sbjct: 72  RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131

Query: 181 GKPDEANRIF-KDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVPQLVT 240
           G+  EA +I  +DI L GL P   T+N +++ LCK G+T NAI LF++L+     P+L+T
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMT 191

Query: 241 YNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHGFEIFFEMK 300
           YNILINGLCK  R+ +   M+ E   SG  PNAVTYTT++K  F+ ++ + G ++F +MK
Sbjct: 192 YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 251

Query: 301 NRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGL-GFDLVFYNTFINLYCKEGKL 360
             GY FDGFA C V+ A +K GR EEA  CM +++++G    D+V YNT +NLY K+G L
Sbjct: 252 KEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL 311

Query: 361 EAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVALNCL 420
           +A   +L+E+E +GL+ DDYTH+II +GL   GN  GA +HL  +   G   + V  NCL
Sbjct: 312 DAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCL 371

Query: 421 IERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCKARRFRCASRLLISCIKGGMKVLK 480
           I+ L KAG +D AM+LF SME+RD F YTS+VHNLCK  R  CAS+LL+SC   GMK+  
Sbjct: 372 IDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPS 431

Query: 481 STRRTVIDGLISSGYTSEAGKVRSKLRMA 508
           S RR V+ G+  +     A K   K++ A
Sbjct: 432 SARRAVLSGIRETVSYQAARKTHIKIKAA 459

BLAST of CmoCh19G003530 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 231.5 bits (589), Expect = 1.5e-60
Identity = 133/444 (29.95%), Postives = 239/444 (53.83%), Query Frame = 0

Query: 69  VASFCKSQQMQKAEDV--IIDGIRLGVLPDVVTYNTLIDGYCRFSGVDTAYSVLYRMREA 128
           +  FC+  + +KA  +  I++G   G +PDV+TYN +I GYC+   ++ A SVL RM   
Sbjct: 144 IRGFCRLGKTRKAAKILEILEG--SGAVPDVITYNVMISGYCKAGEINNALSVLDRM--- 203

Query: 129 GISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMHCLFRLGKPDEA 188
            +SPDV+TYN+++     +  L+Q++++ + MLQ    PD+ +Y  L+    R      A
Sbjct: 204 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 263

Query: 189 NRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVPQLVTYNILING 248
            ++  ++  +G +P  VT+N ++NG+CK G    AI    ++   G  P ++T+NI++  
Sbjct: 264 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 323

Query: 249 LCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRCRQYKHG--FEIFFEMKNRGYA 308
           +C  GR   A ++L + +  G  P+ VT+  L+   F CR+   G   +I  +M   G  
Sbjct: 324 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN--FLCRKGLLGRAIDILEKMPQHGCQ 383

Query: 309 FDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFYNTFINLYCKEGKLEAAYKM 368
            +  +Y  ++  F K  + + A   +E+M+  G   D+V YNT +   CK+GK+E A ++
Sbjct: 384 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 443

Query: 369 LDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFVSNSVALNCLIERLGK 428
           L++L S+G      T++ + DGL + G    A + L+ M       +++  + L+  L +
Sbjct: 444 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 503

Query: 429 AGQIDHAMKL---FESMEIR-DSFAYTSLVHNLCKARRFRCASRLLISCIKGGMKVLKST 488
            G++D A+K    FE M IR ++  + S++  LCK+R+   A   L+  I  G K  +++
Sbjct: 504 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 563

Query: 489 RRTVIDGLISSGYTSEAGKVRSKL 505
              +I+GL   G   EA ++ ++L
Sbjct: 564 YTILIEGLAYEGMAKEALELLNEL 580

BLAST of CmoCh19G003530 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 226.5 bits (576), Expect = 4.9e-59
Identity = 119/412 (28.88%), Postives = 214/412 (51.94%), Query Frame = 0

Query: 46  ALKLIIYLKRMVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNTLID 105
           A+ L+  +  M  K  T      +       +  +A  ++   ++ G  PD+VTY T+++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231

Query: 106 GYCRFSGVDTAYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQSLDLFEEMLQSGITP 165
           G C+   +D A S+L +M +  I  DV+ YN++I G  + + ++ +L+LF EM   GI P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291

Query: 166 DIWSYNTLMHCLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTSNAIMLF 225
           D+++Y++L+ CL   G+  +A+R+  D+I + ++P+ VTF+ +I+   K G    A  L+
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351

Query: 226 RNLQRHGFVPQLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLMKSCFRC 285
             + +    P + TY+ LING C   R+  A+ M    +     PN VTY+TL+K   + 
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411

Query: 286 RQYKHGFEIFFEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLGFDLVFY 345
           ++ + G E+F EM  RG   +   Y T+I  F +    + A +  +QM+  G+  +++ Y
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471

Query: 346 NTFINLYCKEGKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRHLNYMYT 405
           N  ++  CK GKL  A  + + L+   +E D YT++I+ +G+C+ G +E  W     +  
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531

Query: 406 TGFVSNSVALNCLIERLGKAGQIDHAMKLFESMEIRDSFAYTSLVHNLCKAR 458
            G   N +A N +I    + G  + A  L + M+       +   + L +AR
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583

BLAST of CmoCh19G003530 vs. TAIR 10
Match: AT1G63080.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 224.2 bits (570), Expect = 2.4e-58
Identity = 114/363 (31.40%), Postives = 200/363 (55.10%), Query Frame = 0

Query: 92  GVLPDVVTYNTLIDGYCRFSGVDTAYSVLYRMREAGISPDVITYNSLIAGASRNRSLEQS 151
           G  PD+VTY  +I+G C+    D A ++L +M +  I  DV+ Y+++I    + R ++ +
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259

Query: 152 LDLFEEMLQSGITPDIWSYNTLMHCLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMING 211
           L+LF EM   GI PD+++Y++L+ CL   G+  +A+R+  D++ + ++P+ VTFN++I+ 
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319

Query: 212 LCKYGYTSNAIMLFRNLQRHGFVPQLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPN 271
             K G    A  LF  + +    P +VTYN LING C   R+  A+++    +     P+
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379

Query: 272 AVTYTTLMKSCFRCRQYKHGFEIFFEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCME 331
            VTY TL+    + ++   G E+F +M  RG   +   Y T+I  F +    + A +  +
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439

Query: 332 QMIKNGLGFDLVFYNTFINLYCKEGKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNG 391
           QM+ +G+  +++ YNT ++  CK GKLE A  + + L+   +E D YT++I+++G+C+ G
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499

Query: 392 NIEGAWRHLNYMYTTGFVSNSVALNCLIERLGKAGQIDHAMKLFESME----IRDSFAYT 451
            +E  W     +   G   + +A N +I    K G  + A  LF  M+    + DS  Y 
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559

BLAST of CmoCh19G003530 vs. TAIR 10
Match: AT2G01740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 224.2 bits (570), Expect = 2.4e-58
Identity = 145/465 (31.18%), Postives = 238/465 (51.18%), Query Frame = 0

Query: 44  VLALKLIIYL-KRMVSKYSTKFLNICVASFCKSQQMQKAEDVIIDGIRLGVLPDVVTYNT 103
           +L+LK + YL  R  + + + F N  V+  CK  Q++ AED++    R G  PDV++YN+
Sbjct: 38  ILSLKFLAYLVSRGYTPHRSSF-NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNS 97

Query: 104 LIDGYCRFSGVDTAYSVLYRMREAG---ISPDVITYNSLIAGASRNRSLEQSLDLFEEML 163
           LIDG+CR   + +A  VL  +R +      PD++++NSL  G S+ + L++       ML
Sbjct: 98  LIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML 157

Query: 164 QSGITPDIWSYNTLMHCLFRLGKPDEANRIFKDIILKGLSPHPVTFNTMINGLCKYGYTS 223
           +   +P++ +Y+T +    + G+   A + F  +    LSP+ VTF  +I+G CK G   
Sbjct: 158 KC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLE 217

Query: 224 NAIMLFRNLQRHGFVPQLVTYNILINGLCKVGRMRAARRMLNEAMDSGLEPNAVTYTTLM 283
            A+ L++ ++R      +VTY  LI+G CK G M+ A  M +  ++  +EPN++ YTT++
Sbjct: 218 VAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII 277

Query: 284 KSCFRCRQYKHGFEIFFEMKNRGYAFDGFAYCTVIGAFLKLGRFEEANVCMEQMIKNGLG 343
              F+     +  +   +M N+G   D  AY  +I      G+ +EA   +E M K+ L 
Sbjct: 278 DGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 337

Query: 344 FDLVFYNTFINLYCKEGKLEAAYKMLDELESQGLEYDDYTHSIITDGLCRNGNIEGAWRH 403
            D+V + T +N Y K G+++AA  M  +L  +G E D    S + DG+ +NG +     H
Sbjct: 338 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL-----H 397

Query: 404 LNYMYTTGFVSNSVALNCLIERLGKAGQIDHAMKLFESME----IRDSFAYTSLVHNLCK 463
              +Y     +N V    LI+ L K G      +LF  +     + D F YTS +  LCK
Sbjct: 398 EAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCK 457

Query: 464 ARRFRCASRLLISCIKGGMKVLKSTRRTVIDGLISSGYTSEAGKV 501
                 A +L    ++ G+ +      T+I GL S G   EA +V
Sbjct: 458 QGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQV 495

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C0434.1e-13552.80Putative pentatricopeptide repeat-containing protein At4g17915 OS=Arabidopsis th... [more]
Q56XR63.0e-13052.34Pentatricopeptide repeat-containing protein At5g46680 OS=Arabidopsis thaliana OX... [more]
Q3EDF82.1e-5929.95Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9LQ166.9e-5828.88Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX... [more]
Q9ZUA23.4e-5731.18Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1EXR22.1e-267100.00putative pentatricopeptide repeat-containing protein At4g17915 isoform X1 OS=Cuc... [more]
A0A6J1IFW81.4e-25595.39putative pentatricopeptide repeat-containing protein At4g17915 isoform X1 OS=Cuc... [more]
A0A6J1D2P01.1e-23687.28putative pentatricopeptide repeat-containing protein At4g17915 OS=Momordica char... [more]
A0A6J1EY551.2e-235100.00putative pentatricopeptide repeat-containing protein At4g17915 isoform X2 OS=Cuc... [more]
A0A6J1ICF98.1e-22796.00putative pentatricopeptide repeat-containing protein At4g17915 isoform X2 OS=Cuc... [more]
Match NameE-valueIdentityDescription
AT5G46680.12.2e-13152.34Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G09900.11.5e-6029.95Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G62910.14.9e-5928.88Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G63080.12.4e-5831.40Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G01740.12.4e-5831.18Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 309..338
e-value: 4.2E-4
score: 20.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 235..283
e-value: 6.4E-15
score: 55.1
coord: 165..214
e-value: 2.9E-13
score: 49.8
coord: 341..389
e-value: 5.8E-14
score: 52.0
coord: 95..141
e-value: 5.0E-14
score: 52.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 238..272
e-value: 1.6E-10
score: 38.5
coord: 133..167
e-value: 4.2E-8
score: 30.9
coord: 378..411
e-value: 0.0022
score: 16.0
coord: 273..304
e-value: 9.4E-7
score: 26.6
coord: 98..132
e-value: 2.3E-8
score: 31.7
coord: 309..338
e-value: 2.3E-5
score: 22.2
coord: 414..439
e-value: 6.1E-5
score: 20.9
coord: 169..200
e-value: 3.9E-7
score: 27.8
coord: 203..235
e-value: 1.2E-7
score: 29.5
coord: 344..376
e-value: 1.2E-7
score: 29.4
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 407..439
e-value: 1.9E-5
score: 24.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 236..270
score: 12.386327
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 166..200
score: 12.101333
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 306..340
score: 9.514466
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 201..235
score: 11.706726
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 271..305
score: 10.64348
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 341..375
score: 11.454616
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 96..130
score: 13.08785
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 411..445
score: 9.20755
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 131..165
score: 12.879585
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 376..410
score: 9.13082
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 147..291
e-value: 2.9E-43
score: 150.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 391..507
e-value: 3.1E-17
score: 64.5
coord: 36..146
e-value: 1.0E-21
score: 79.1
coord: 299..390
e-value: 3.9E-21
score: 77.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 135..367
NoneNo IPR availablePANTHERPTHR47932:SF33OS02G0793200 PROTEINcoord: 55..510
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 55..510

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G003530.1CmoCh19G003530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding