CmoCh19G003480 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G003480
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	polygalacturonase-like
Location	Cmo_Chr19: 2907037 .. 2908864 (-)
RNA-Seq Expression	CmoCh19G003480
Synteny	CmoCh19G003480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTTCTTGGAACCTTACATGTTTTTCTTTCTCTTCTACTTCTGTTTTTTAACCATGCTTGGGCTGTTGGATTAACATTCAATATTGTTAATCTAGGAGCGAAGTCCGACGGAAAGATTGATGTCTCGCCTGTGCTTCAAACAGCATGGACTAAGGCCTGTGACTCATCTAAACCTACCACTATTTACGTTCCCAAGGGAATATTCTATGTTCGAAGTGTGAGCTTTAATGGACCTTGTAAAAACAATGCTATTACTCTTCTCATTGATGGAACTCTTGTGGCTTCTCCGAACATTCAAGTTCTAGCTAGAACTAAATCTTGGCTTGAGTTTAGTCACATAAATGGACTTTCCATTGTTGGCGGTGTTATTGATGGGCAAGGAACTGCCTTATGGGATTGTAAACGCTCAGGAAAGAGTTGCCCCAATGGAGCCCGGGTAAGCAAAATTTGAGTTGACTAGATAGAGAACAAAATTTGAAATTTTTTTCTTTAGCTAAAATTTGAAAGAAATTGGAACCCATTAGTTACTATATTAATTTAAATTTTCACTAATTCTTGTGTTTGATTATTTTGAATGGACAGAGTCTTCAAATCAACGATACAAAAAATGTAAACATCTGGAGTTTATCTTCAATTAACAGTCAAATGTTCAACATTGTGGTGCATGGGTGCCAAAATGTGCATATGACTGGAGTGAGTGTCTCGTCTGCAGGCGATAGTCCAAACACTGATGGCATCCACGTGCAACAATCATCAAATGTGACCATCCTCAACTCGAACATCGGCACTGGTGACGACTGCATCTCAATCGGTCCAGGGACTTCCAATTTGTGGATGGAAAATATTACATGTGGACCTGGACATGGAATCAGGTAACTAAAAATAGATGATGATAACATATTTTAAATTAATTAAATATACATGGTTTGAAAATTTTGTATTTTGTTTGAACTTGTTTGTAGCATTGGGAGTTTGGGGAAGGGAGCTGAGGAGGATGGAGTGCATAATGTTACAGTGATATCATCTACTTTCACAGGGACTCAGAATGGAGTAAGGATTAAGTCTTGGGGACGACCAAGCAATGGATTCGCTACAAAAGTTTATTTTCAGCGTATTATTATGGATAATGTGAAAAATCCAATAATAATTGATGAAAATTACTGTCCACATCACAAAAATTGTCCTGGTCAGGTATATTTCCTAATTAATTTAAATTTTATAAATAGAACTAAAATTTTCAATTTTATCAAGTAATTGATTTCTTTTATCTTTGGTGGGTTACCCTCTCATATCTTAAAACCGTGATATTAGATCAAGTTTTTATGATTTTAATTTTTAATTTACCCATAATATTTCTACCACGATCTTTCTATCATCTAGAATATCTAAGATTTTAAGTATAATTTCAAAATGATTGTATATATGTATATTATTTTATAATATAGTTTTTCTAAGGTTTTAATTTCAAAATTTATCATAGTTGAGATGAATTTAAAAATTTTTGGATGAGATTAACTCAATAAAACAAATTTACATGGTAAAAATGTTCTTGTTTATCAATTTTCATAGCATATTTTGATTATTCTTCTTTATCTCAGCAGGCTTCCGGAGTTAAAGTTAGCAACGTAACATACGAAGATATTACGGGAACTTCAGCCACTGAAATAGCAATCAATTTTGATTGTAGCCCAATAAATCATTGCACTGGATTAAATTTGAAAGACATAAAGCTAACTTACGAGAATCAAATCGCTCAAGCTTCATGTAAAAATGCGGAAGGAACTGCTTTTGGTGTGGTTGAACCTTCTAGTTGCTTAGCATAG

mRNA sequence

ATGGCTCTTCTTGGAACCTTACATGTTTTTCTTTCTCTTCTACTTCTGTTTTTTAACCATGCTTGGGCTGTTGGATTAACATTCAATATTGTTAATCTAGGAGCGAAGTCCGACGGAAAGATTGATGTCTCGCCTGTGCTTCAAACAGCATGGACTAAGGCCTGTGACTCATCTAAACCTACCACTATTTACGTTCCCAAGGGAATATTCTATGTTCGAAGTGTGAGCTTTAATGGACCTTGTAAAAACAATGCTATTACTCTTCTCATTGATGGAACTCTTGTGGCTTCTCCGAACATTCAAGTTCTAGCTAGAACTAAATCTTGGCTTGAGTTTAGTCACATAAATGGACTTTCCATTGTTGGCGGTGTTATTGATGGGCAAGGAACTGCCTTATGGGATTGTAAACGCTCAGGAAAGAGTTGCCCCAATGGAGCCCGGAGTCTTCAAATCAACGATACAAAAAATGTAAACATCTGGAGTTTATCTTCAATTAACAGTCAAATGTTCAACATTGTGGTGCATGGGTGCCAAAATGTGCATATGACTGGAGTGAGTGTCTCGTCTGCAGGCGATAGTCCAAACACTGATGGCATCCACGTGCAACAATCATCAAATGTGACCATCCTCAACTCGAACATCGGCACTGGTGACGACTGCATCTCAATCGGTCCAGGGACTTCCAATTTGTGGATGGAAAATATTACATGTGGACCTGGACATGGAATCAGCATTGGGAGTTTGGGGAAGGGAGCTGAGGAGGATGGAGTGCATAATGTTACAGTGATATCATCTACTTTCACAGGGACTCAGAATGGAGCTTCCGGAGTTAAAGTTAGCAACGTAACATACGAAGATATTACGGGAACTTCAGCCACTGAAATAGCAATCAATTTTGATTGTAGCCCAATAAATCATTGCACTGGATTAAATTTGAAAGACATAAAGCTAACTTACGAGAATCAAATCGCTCAAGCTTCATGTAAAAATGCGGAAGGAACTGCTTTTGGTGTGGTTGAACCTTCTAGTTGCTTAGCATAG

Coding sequence (CDS)

ATGGCTCTTCTTGGAACCTTACATGTTTTTCTTTCTCTTCTACTTCTGTTTTTTAACCATGCTTGGGCTGTTGGATTAACATTCAATATTGTTAATCTAGGAGCGAAGTCCGACGGAAAGATTGATGTCTCGCCTGTGCTTCAAACAGCATGGACTAAGGCCTGTGACTCATCTAAACCTACCACTATTTACGTTCCCAAGGGAATATTCTATGTTCGAAGTGTGAGCTTTAATGGACCTTGTAAAAACAATGCTATTACTCTTCTCATTGATGGAACTCTTGTGGCTTCTCCGAACATTCAAGTTCTAGCTAGAACTAAATCTTGGCTTGAGTTTAGTCACATAAATGGACTTTCCATTGTTGGCGGTGTTATTGATGGGCAAGGAACTGCCTTATGGGATTGTAAACGCTCAGGAAAGAGTTGCCCCAATGGAGCCCGGAGTCTTCAAATCAACGATACAAAAAATGTAAACATCTGGAGTTTATCTTCAATTAACAGTCAAATGTTCAACATTGTGGTGCATGGGTGCCAAAATGTGCATATGACTGGAGTGAGTGTCTCGTCTGCAGGCGATAGTCCAAACACTGATGGCATCCACGTGCAACAATCATCAAATGTGACCATCCTCAACTCGAACATCGGCACTGGTGACGACTGCATCTCAATCGGTCCAGGGACTTCCAATTTGTGGATGGAAAATATTACATGTGGACCTGGACATGGAATCAGCATTGGGAGTTTGGGGAAGGGAGCTGAGGAGGATGGAGTGCATAATGTTACAGTGATATCATCTACTTTCACAGGGACTCAGAATGGAGCTTCCGGAGTTAAAGTTAGCAACGTAACATACGAAGATATTACGGGAACTTCAGCCACTGAAATAGCAATCAATTTTGATTGTAGCCCAATAAATCATTGCACTGGATTAAATTTGAAAGACATAAAGCTAACTTACGAGAATCAAATCGCTCAAGCTTCATGTAAAAATGCGGAAGGAACTGCTTTTGGTGTGGTTGAACCTTCTAGTTGCTTAGCATAG

Protein sequence

MALLGTLHVFLSLLLLFFNHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKPTTIYVPKGIFYVRSVSFNGPCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSIVGGVIDGQGTALWDCKRSGKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNVHMTGVSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPGHGISIGSLGKGAEEDGVHNVTVISSTFTGTQNGASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLKDIKLTYENQIAQASCKNAEGTAFGVVEPSSCLA

Homology

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BLAST of CmoCh19G003480 vs. ExPASy Swiss-Prot
Match: P48979 (Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 3.8e-108
Identity = 203/384 (52.86%), Postives = 259/384 (67.45%), Query Frame = 0


Query: 11  LSLLLLF-FNHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKPTTIYVPKGI 70
           LSL+ +F  N A A  LT+N+ +LGAK+DGK D +    +AW KAC S  P  IYVP G 
Sbjct: 10  LSLIFVFMINSAIASPLTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGT 69

Query: 71  FYVRSVSFNGPCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSIVGGVIDGQG 130
           F++R V F+GPCKNNAIT  I GTLVA  + +V+    +W+ F H+NG++I GG++DGQG
Sbjct: 70  FFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQG 129

Query: 131 TALWDCKR-SGKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNVHMTGVSVS 190
           TALW CK   G+SCP+GA +L  +D+ N+ +  L+S+NSQMF+IV++  QNV M GV VS
Sbjct: 130 TALWACKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVS 189

Query: 191 SAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPGHGISIGSL 250
            +G+SPNTDGIHVQ SS VTILNS I TGDDC+SIGPGTSNLW+E + CGPGHGISIGSL
Sbjct: 190 RSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSL 249

Query: 251 GKGAEEDGVHNVTVISSTFTGTQNG----------------------------------- 310
           GK  EE GV NVTV + TF+GTQNG                                   
Sbjct: 250 GKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQ 309

Query: 311 ------------ASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLKDIKLTYEN 346
                        SGV++S+VTYEDI GTSATE+A+ FDCSP + C  + L+D+KLTY+N
Sbjct: 310 HYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTYKN 369

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BLAST of CmoCh19G003480 vs. ExPASy Swiss-Prot
Match: O22818 (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 6.7e-81
Identity = 171/387 (44.19%), Postives = 231/387 (59.69%), Query Frame = 0


Query: 11  LSLLLLFF----NHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKPTTIYVP 70
           L+L++L F    + A  +  T N+++ GAK DG  D +     AW  AC S+ PTTI VP
Sbjct: 12  LALIILDFTLISSLAHPIPSTLNVLSYGAKPDGSKDSTKAFLAAWDVACASANPTTIIVP 71

Query: 71  KGIFYVRSVSFNG-PCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSIVGGVI 130
           KG F V ++ F+G  CK   I++ I G++VA  + +++A +K W+ F  +  +SI GG++
Sbjct: 72  KGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGIL 131

Query: 131 DGQGTALWDCKRS-GKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNVHMTG 190
           D QGT+LW CK + G +CP GA+SL  + + N+ I  L+SINSQ F+IV+    NV++ G
Sbjct: 132 DAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDG 191

Query: 191 VSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPGHGIS 250
           V VS+  +SPNTDGIHV+ S +V I NS IGTGDDCISIGPG++N++++ I CGPGHGIS
Sbjct: 192 VKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGIS 251

Query: 251 IGSLGKGAEEDGVHNVTVISSTFTGTQNGA------------------------------ 310
           IGSLG+  EE GV NVTV +  F GT NG                               
Sbjct: 252 IGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPI 311

Query: 311 ----------------SGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLKDIKLT 346
                           SGVKVSNV YEDI GTS TE+A+  DCS    CTG+ + D+ L 
Sbjct: 312 IIDQHYCLHKPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLV 371

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BLAST of CmoCh19G003480 vs. ExPASy Swiss-Prot
Match: P35339 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.7e-58
Identity = 135/373 (36.19%), Postives = 203/373 (54.42%), Query Frame = 0


Query: 25  GLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKPTTIYVPKGIFYVRSVSFNGPCKNN 84
           G +F+I  LGA  +GK D +  +Q AW  AC  +   TI +PKG F V  ++F GPCK +
Sbjct: 38  GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGD 97

Query: 85  AITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSIVG-GVIDGQGTALWDCKRSGK--S 144
            +T+ ++G L+A+ ++       +W+E   ++ L I G G +DGQG A+W      K   
Sbjct: 98  -VTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYD 157

Query: 145 CPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNVHMTGVSVSSAGDSPNTDGIHV 204
           C     SL ++   N  +  ++ +NS+ F++ ++ C+++ +  V+V++ GDSPNTDGIH+
Sbjct: 158 CKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHM 217

Query: 205 QQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPGHGISIGSLGKGAEEDGVHNVT 264
             SS VTI N+ IG GDDCISIGPGTS + +  +TCGPGHGISIGSLG+  +E  V ++ 
Sbjct: 218 GDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDIN 277

Query: 265 V----ISSTFTG--------------------------------------------TQNG 324
           V    +  T  G                                            T NG
Sbjct: 278 VKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANG 337

Query: 325 ASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLKDIKLTYE--NQIAQASCKNA 345
           AS V V +VT+++ITGTS+T  A+N  C+    CTG+ + D+ + Y   N    A CKNA
Sbjct: 338 ASKVTVKDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNA 397

[Close]

BLAST of CmoCh19G003480 vs. ExPASy Swiss-Prot
Match: P35338 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.4e-57
Identity = 134/373 (35.92%), Postives = 200/373 (53.62%), Query Frame = 0


Query: 25  GLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKPTTIYVPKGIFYVRSVSFNGPCKNN 84
           G +F+I  LGA  +GK D +  +Q AW  AC  +   TI +PKG F V  ++F GPCK +
Sbjct: 38  GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGD 97

Query: 85  AITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSIVG-GVIDGQGTALWDCKRSGK--S 144
            +T+ +DG L+A+ ++       +W+E   ++ L I G G +DGQG A+W      K   
Sbjct: 98  -VTIQVDGNLLATTDLSQYKEHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYD 157

Query: 145 CPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNVHMTGVSVSSAGDSPNTDGIHV 204
           C     SL ++   N  +  ++ +NS+ F++ ++ C+N+ +  V+V++ GDSPNTDGIH+
Sbjct: 158 CKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHM 217

Query: 205 QQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPGHGISIGSLGKGAEEDGVHNVT 264
             SS +TI N+ IG GDDCISIGPGTS + +  +TCGPGHGISIGSLG+  +E  V ++ 
Sbjct: 218 GDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDIN 277

Query: 265 V----ISSTFTG--------------------------------------------TQNG 324
           V    +  T  G                                            T NG
Sbjct: 278 VKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANG 337

Query: 325 ASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLKDIKLTYE--NQIAQASCKNA 345
           AS V V +VT+++ITGTS+T  AI+  C+    CTG  + D+ + Y   N    A C NA
Sbjct: 338 ASKVTVKDVTFKNITGTSSTPEAISLLCTAKVPCTGATMDDVNVEYSGTNNKTMAICTNA 397

[Close]

BLAST of CmoCh19G003480 vs. ExPASy Swiss-Prot
Match: P26216 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 6.8e-57
Identity = 132/373 (35.39%), Postives = 201/373 (53.89%), Query Frame = 0


Query: 25  GLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKPTTIYVPKGIFYVRSVSFNGPCKNN 84
           G +F+I  LGA  +GK D +  +Q AW  AC  +   TI +PKG F V  ++F GPCK +
Sbjct: 38  GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGD 97

Query: 85  AITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSIVG-GVIDGQGTALWDCKRSGK--S 144
            +T+ +DG L+A+ ++       +W+E   ++ L I G G +DGQG A+W      K   
Sbjct: 98  -VTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYD 157

Query: 145 CPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNVHMTGVSVSSAGDSPNTDGIHV 204
           C     SL ++   N  +  ++ +NS+ F++ ++ C+++ +  V+V++ GDSPNTDGIH+
Sbjct: 158 CKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHM 217

Query: 205 QQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPGHGISIGSLGKGAEEDGVHNVT 264
             SS +TI N+ IG GDDCISIGPGTS + +  +TCGPGHGISIGSLG+  +E  V ++ 
Sbjct: 218 GDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDIN 277

Query: 265 V----ISSTFTG--------------------------------------------TQNG 324
           V    +  T  G                                            T NG
Sbjct: 278 VKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANG 337

Query: 325 ASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLKDIKLTYE--NQIAQASCKNA 345
           AS V V +VT+++ITGTS+T  A++  C+    CTG+ + D+ + Y   N    A C NA
Sbjct: 338 ASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNA 397

[Close]

BLAST of CmoCh19G003480 vs. ExPASy TrEMBL
Match: A0A6J1F386 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111439563 PE=3 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 1.6e-189
Identity = 346/393 (88.04%), Postives = 346/393 (88.04%), Query Frame = 0


Query: 1   MALLGTLHVFLSLLLLFFNHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKP 60
           MALLGTLHVFLSLLLLFFNHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKP
Sbjct: 1   MALLGTLHVFLSLLLLFFNHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKP 60

Query: 61  TTIYVPKGIFYVRSVSFNGPCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSI 120
           TTIYVPKGIFYVRSVSFNGPCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSI
Sbjct: 61  TTIYVPKGIFYVRSVSFNGPCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSI 120

Query: 121 VGGVIDGQGTALWDCKRSGKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNV 180
           VGGVIDGQGTALWDCKRSGKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNV
Sbjct: 121 VGGVIDGQGTALWDCKRSGKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNV 180

Query: 181 HMTGVSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPG 240
           HMTGVSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPG
Sbjct: 181 HMTGVSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPG 240

Query: 241 HGISIGSLGKGAEEDGVHNVTVISSTFTGTQNG--------------------------- 300
           HGISIGSLGKGAEEDGVHNVTVISSTFTGTQNG                           
Sbjct: 241 HGISIGSLGKGAEEDGVHNVTVISSTFTGTQNGVRIKSWGRPSNGFATKVYFQRIIMDNV 300

Query: 301 --------------------ASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLK 347
                               ASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLK
Sbjct: 301 KNPIIIDENYCPHHKNCPGQASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLK 360

[Close]

BLAST of CmoCh19G003480 vs. ExPASy TrEMBL
Match: A0A6J1IDZ8 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111474610 PE=3 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.4e-174
Identity = 326/393 (82.95%), Postives = 332/393 (84.48%), Query Frame = 0


Query: 1   MALLGTLHVFLSLLLLFFNHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKP 60
           MALL +LHVFLSLLLLFFNHA AVGLTFNIV+LGAKSDGKIDVS VLQ AW KACDSSKP
Sbjct: 1   MALLRSLHVFLSLLLLFFNHALAVGLTFNIVSLGAKSDGKIDVSSVLQIAWAKACDSSKP 60

Query: 61  TTIYVPKGIFYVRSVSFNGPCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSI 120
           TTIYVPKGIFYVRSVSFNGPCKNNAITLLIDGTLVAS NIQVLARTK WLEF+HINGLSI
Sbjct: 61  TTIYVPKGIFYVRSVSFNGPCKNNAITLLIDGTLVASSNIQVLARTKFWLEFNHINGLSI 120

Query: 121 VGGVIDGQGTALWDCKRSGKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNV 180
           VGGVIDGQGTALWDCKRSGKSCPNGARSLQINDTKNVNIW LSSINSQMFNIVV GCQNV
Sbjct: 121 VGGVIDGQGTALWDCKRSGKSCPNGARSLQINDTKNVNIWGLSSINSQMFNIVVDGCQNV 180

Query: 181 HMTGVSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPG 240
           HMTGVSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLW+ENITCGPG
Sbjct: 181 HMTGVSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWIENITCGPG 240

Query: 241 HGISIGSLGKGAEEDGVHNVTVISSTFTGTQNG--------------------------- 300
           HGISIGSLGK AEEDGVHNVTVISSTFTGTQNG                           
Sbjct: 241 HGISIGSLGKRAEEDGVHNVTVISSTFTGTQNGVRIKSWGRPSNGFATKVHFQRIIMDNV 300

Query: 301 --------------------ASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLK 347
                               ASGVKVS+VTYEDI GTSATEIAINFDCSPINHCT L+LK
Sbjct: 301 KNPIIIDENYCPHHKNCPGQASGVKVSDVTYEDIKGTSATEIAINFDCSPINHCTRLSLK 360

[Close]

BLAST of CmoCh19G003480 vs. ExPASy TrEMBL
Match: A0A6J1IEE8 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111472461 PE=3 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 3.1e-174
Identity = 325/395 (82.28%), Postives = 331/395 (83.80%), Query Frame = 0


Query: 1   MALLGTLHVFLSLLLLFFNHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKP 60
           MALL +LHVFLSLLLLFFNHA AVG TFNIV+LGAKSDGKIDVS VLQTAW KACDSSKP
Sbjct: 1   MALLRSLHVFLSLLLLFFNHALAVGFTFNIVSLGAKSDGKIDVSSVLQTAWAKACDSSKP 60

Query: 61  TTIYVPKGIFYVRSVSFNGPCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSI 120
           TTIYVPKGIFYVRSVSFNGPCKNNAITLLIDGTLVAS NIQVLARTK WLEF+HINGLSI
Sbjct: 61  TTIYVPKGIFYVRSVSFNGPCKNNAITLLIDGTLVASSNIQVLARTKFWLEFNHINGLSI 120

Query: 121 VGGVIDGQGTALWDCKRSGKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNV 180
           VGGVIDGQGTALWDCKRSGKSCPNGARSLQINDTKNVNIW LSSINSQMFNIVV GCQNV
Sbjct: 121 VGGVIDGQGTALWDCKRSGKSCPNGARSLQINDTKNVNIWGLSSINSQMFNIVVDGCQNV 180

Query: 181 HMTGVSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPG 240
           HMTGVSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPG
Sbjct: 181 HMTGVSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPG 240

Query: 241 HGISIGSLGKGAEEDGVHNVTVISSTFTGTQNG--------------------------- 300
           HGISIGSLGK  EEDGVHNVTVISSTFTGTQNG                           
Sbjct: 241 HGISIGSLGKRTEEDGVHNVTVISSTFTGTQNGNGVRIKSWGRPSNGFATKVHFQRIIMD 300

Query: 301 ----------------------ASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLN 347
                                 ASGVKVS+VTYEDI GTSATEIAINFDCSPINHCT L+
Sbjct: 301 NVKNPIIIDENYCPHHKNCPGQASGVKVSDVTYEDIKGTSATEIAINFDCSPINHCTRLS 360

[Close]

BLAST of CmoCh19G003480 vs. ExPASy TrEMBL
Match: A0A6J1I843 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111471802 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.9e-150
Identity = 284/392 (72.45%), Postives = 302/392 (77.04%), Query Frame = 0


Query: 2   ALLGTLHVFLSLLLLFFNHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKPT 61
           ALL T HVFLSL LLFFNHA A  LTFNI++LGAK DGK D S VLQ  W KACDSS P 
Sbjct: 14  ALLVTFHVFLSLQLLFFNHALAAELTFNIISLGAKPDGKTDASSVLQMTWAKACDSSTPA 73

Query: 62  TIYVPKGIFYVRSVSFNGPCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSIV 121
           TIYVP GIFYVRSVSFNGPCKNN IT+LIDGTLVAS +IQVLA+TKSW+EFSHI+GLSI 
Sbjct: 74  TIYVPDGIFYVRSVSFNGPCKNNVITVLIDGTLVASSDIQVLAKTKSWIEFSHIDGLSIT 133

Query: 122 GGVIDGQGTALWDCKRSGKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNVH 181
           GG IDGQGTALW+CK SGKSCP GA SLQIND +NVNI  LSSINSQ FNIVVHGCQNVH
Sbjct: 134 GGTIDGQGTALWNCKHSGKSCPVGATSLQINDAQNVNINGLSSINSQKFNIVVHGCQNVH 193

Query: 182 MTGVSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPGH 241
           MT V+VS+A DSPNTDGIHVQQSS+VTILNS+I  GDDCISI PGTSNLWME+ITCGPGH
Sbjct: 194 MTRVNVSAADDSPNTDGIHVQQSSDVTILNSSISNGDDCISISPGTSNLWMESITCGPGH 253

Query: 242 GISIGSLGKGAEEDGVHNVTVISSTFTGTQNG---------------------------- 301
           GISIGSLG  AEEDGVHNVT+  STFTGTQNG                            
Sbjct: 254 GISIGSLGIKAEEDGVHNVTLTLSTFTGTQNGVRIKSWGRPSRGFATKVYFQHIIMDNVK 313

Query: 302 -------------------ASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLKD 347
                              ASGVKVS VTYEDI GTSATEIAINFDCSPINHCTGL++KD
Sbjct: 314 NPIIIDQNYCPHETDCPGQASGVKVSEVTYEDIKGTSATEIAINFDCSPINHCTGLSMKD 373

[Close]

BLAST of CmoCh19G003480 vs. ExPASy TrEMBL
Match: A0A6J1ICG2 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111471804 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.9e-150
Identity = 284/392 (72.45%), Postives = 302/392 (77.04%), Query Frame = 0


Query: 2   ALLGTLHVFLSLLLLFFNHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKPT 61
           ALL T HVFLSL LLFFNHA A  LTFNI++LGAK DGK D S VLQ  W KACDSS P 
Sbjct: 14  ALLVTFHVFLSLQLLFFNHALAAELTFNIISLGAKPDGKTDASSVLQMTWAKACDSSTPA 73

Query: 62  TIYVPKGIFYVRSVSFNGPCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSIV 121
           TIYVP GIFYVRSVSFNGPCKNN IT+LIDGTLVAS +IQVLA+TKSW+EFSHI+GLSI 
Sbjct: 74  TIYVPDGIFYVRSVSFNGPCKNNVITVLIDGTLVASSDIQVLAKTKSWIEFSHIDGLSIT 133

Query: 122 GGVIDGQGTALWDCKRSGKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNVH 181
           GG IDGQGTALW+CK SGKSCP GA SLQIND +NVNI  LSSINSQ FNIVVHGCQNVH
Sbjct: 134 GGTIDGQGTALWNCKHSGKSCPVGATSLQINDAQNVNINGLSSINSQKFNIVVHGCQNVH 193

Query: 182 MTGVSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPGH 241
           MT V+VS+A DSPNTDGIHVQQSS+VTILNS+I  GDDCISI PGTSNLWME+ITCGPGH
Sbjct: 194 MTRVNVSAADDSPNTDGIHVQQSSDVTILNSSISNGDDCISISPGTSNLWMESITCGPGH 253

Query: 242 GISIGSLGKGAEEDGVHNVTVISSTFTGTQNG---------------------------- 301
           GISIGSLG  AEEDGVHNVT+  STFTGTQNG                            
Sbjct: 254 GISIGSLGIKAEEDGVHNVTLTLSTFTGTQNGVRIKSWGRPSRGFATKVYFQHIIMDNVK 313

Query: 302 -------------------ASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLKD 347
                              ASGVKVS VTYEDI GTSATEIAINFDCSPINHCTGL++KD
Sbjct: 314 NPIIIDQNYCPHETDCPGQASGVKVSEVTYEDIKGTSATEIAINFDCSPINHCTGLSMKD 373

[Close]

BLAST of CmoCh19G003480 vs. TAIR 10
Match: AT3G59850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 350.1 bits (897), Expect = 2.0e-96
Identity = 179/388 (46.13%), Postives = 244/388 (62.89%), Query Frame = 0


Query: 7   LHVFLSLLLLF-FNHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKPTTIYV 66
           +H  L ++LLF  + + +   T+NI++ GAK DGK D +      W KAC S KP TI V
Sbjct: 1   MHSSLLIVLLFLLSVSSSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILV 60

Query: 67  PKGIFYVRSVSFNG-PCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSIVGGV 126
           PKG F +RS+ F+G  CK  ++T  I GTLVA  + +V+ +   W+ F H++G+S+ GGV
Sbjct: 61  PKGRFLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGV 120

Query: 127 IDGQGTALWDCKRSGKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNVHMTG 186
           +D QG +LW CK+SGK+CP+GA S+    ++NV I  L+S+NSQMF++ ++GC NV + G
Sbjct: 121 LDAQGASLWSCKKSGKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDG 180

Query: 187 VSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPGHGIS 246
           V VS+ G+SPNTDGIHVQ SS V+ILNS I TGDDC+SIGPGT+ LW+EN+ CGPGHGIS
Sbjct: 181 VKVSADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGIS 240

Query: 247 IGSLGKGAEEDGVHNVTVISSTFTGTQNG------------------------------- 306
           IGSLGK + E GV N+TV ++TFTGT+NG                               
Sbjct: 241 IGSLGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPI 300

Query: 307 ----------------ASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLKDIKL 346
                            SG+K+S+V + DI GTSATE+ +  DCS    CTG+ ++D+KL
Sbjct: 301 VIDQNYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKL 360

[Close]

BLAST of CmoCh19G003480 vs. TAIR 10
Match: AT2G43870.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 345.1 bits (884), Expect = 6.4e-95
Identity = 174/382 (45.55%), Postives = 241/382 (63.09%), Query Frame = 0


Query: 11  LSLLLLFFNHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKPTTIYVPKGIF 70
           L +L +FF  +     ++N+++ GAK DGK D +      W  AC SS+P TI VPKG F
Sbjct: 4   LLVLFVFFFISSCSAQSYNVLSFGAKPDGKTDATKAFMAVWQTACASSRPVTIVVPKGRF 63

Query: 71  YVRSVSFNG-PCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSIVGGVIDGQG 130
            +RSV+F+G  CK   +T  IDGTLVA  + +V+     W+ F H++G+++ GGV+D +G
Sbjct: 64  LLRSVTFDGSKCKPKPVTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGGVLDARG 123

Query: 131 TALWDCKRSGKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNVHMTGVSVSS 190
            +LWDCK+SGK+CP+GA ++    + NV +  L+S+NSQMF++V++GC NV + GV V +
Sbjct: 124 ASLWDCKKSGKNCPSGATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVKVLA 183

Query: 191 AGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPGHGISIGSLG 250
           AG+SPNTDGIHVQ SS+V+I N+ I TGDDC+SIGPGT+ LW+EN+ CGPGHGISIGSLG
Sbjct: 184 AGNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLG 243

Query: 251 KGAEEDGVHNVTVISSTFTGTQNG------------------------------------ 310
           K + E GV NVTV + TFTGT NG                                    
Sbjct: 244 KDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIIIDQN 303

Query: 311 ----------ASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLKDIKLTYENQI 346
                      SG+K+S+V + DI GTSATE+ +  DCS    CTG+ L+D+KLTY+N+ 
Sbjct: 304 YCPDHDCPRQVSGIKISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVKLTYQNKP 363

[Close]

BLAST of CmoCh19G003480 vs. TAIR 10
Match: AT2G43860.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 302.4 bits (773), Expect = 4.8e-82
Identity = 171/387 (44.19%), Postives = 231/387 (59.69%), Query Frame = 0


Query: 11  LSLLLLFF----NHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKPTTIYVP 70
           L+L++L F    + A  +  T N+++ GAK DG  D +     AW  AC S+ PTTI VP
Sbjct: 12  LALIILDFTLISSLAHPIPSTLNVLSYGAKPDGSKDSTKAFLAAWDVACASANPTTIIVP 71

Query: 71  KGIFYVRSVSFNG-PCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSIVGGVI 130
           KG F V ++ F+G  CK   I++ I G++VA  + +++A +K W+ F  +  +SI GG++
Sbjct: 72  KGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGIL 131

Query: 131 DGQGTALWDCKRS-GKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNVHMTG 190
           D QGT+LW CK + G +CP GA+SL  + + N+ I  L+SINSQ F+IV+    NV++ G
Sbjct: 132 DAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDG 191

Query: 191 VSVSSAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPGHGIS 250
           V VS+  +SPNTDGIHV+ S +V I NS IGTGDDCISIGPG++N++++ I CGPGHGIS
Sbjct: 192 VKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGIS 251

Query: 251 IGSLGKGAEEDGVHNVTVISSTFTGTQNGA------------------------------ 310
           IGSLG+  EE GV NVTV +  F GT NG                               
Sbjct: 252 IGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPI 311

Query: 311 ----------------SGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLKDIKLT 346
                           SGVKVSNV YEDI GTS TE+A+  DCS    CTG+ + D+ L 
Sbjct: 312 IIDQHYCLHKPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLV 371

[Close]

BLAST of CmoCh19G003480 vs. TAIR 10
Match: AT2G43880.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 301.6 bits (771), Expect = 8.1e-82
Identity = 161/384 (41.93%), Postives = 215/384 (55.99%), Query Frame = 0


Query: 9   VFLSLLLLFFNHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKPTTIYVPKG 68
           +F S+ + F   +     +FN+   GA+ DG+ D +    TAW+ AC S     +YVP+G
Sbjct: 12  IFFSINIFFLIKSSHAMPSFNVQRYGARGDGRADATKSFLTAWSLACGSRARAMVYVPRG 71

Query: 69  IFYVRSVSFNGPCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSIVGGVIDGQ 128
            + V+++ F GPCK N IT   DGTLVA  N   +  +  W+ F+ +N +S+ GG ID +
Sbjct: 72  TYLVKNLVFWGPCK-NIITFKNDGTLVAPANYWDIGNSGYWILFAKVNRISVYGGTIDAR 131

Query: 129 GTALWDCKRSGKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNVHMTGVSVS 188
           G   W C++ G  CP GARS+  +   NV +  LSS NSQ  ++ VH   NV +  V + 
Sbjct: 132 GAGYWSCRKKGSHCPQGARSISFSWCNNVLLSGLSSFNSQNMHVTVHHSSNVRIENVRIR 191

Query: 189 SAGDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPGHGISIGSL 248
           +   SPNTDGIHVQ SS VTI    I TGDDCI++  G+ N+W+E + CGPGHGISIGSL
Sbjct: 192 APSGSPNTDGIHVQSSSGVTISGGTIATGDDCIALSQGSRNIWIERVNCGPGHGISIGSL 251

Query: 249 GKGAEEDGVHNVTVISSTFTGTQNG----------------------------------- 308
           G  A E+GV NVTV SS FT TQNG                                   
Sbjct: 252 GDYANEEGVQNVTVTSSVFTKTQNGVRIKTWARPSRGFVNNVVFRNLIMNNVENPVIIDQ 311

Query: 309 ------------ASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLKDIKLTYEN 346
                       +SGVK+S VT+ +I GTS T IA+  DCS  NHCTGL L+DIKLTY  
Sbjct: 312 NYCPNGKGCPRQSSGVKISGVTFANIKGTSTTPIAMKLDCSGSNHCTGLRLQDIKLTYMR 371

[Close]

BLAST of CmoCh19G003480 vs. TAIR 10
Match: AT1G05660.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 293.1 bits (749), Expect = 2.9e-79
Identity = 156/383 (40.73%), Postives = 220/383 (57.44%), Query Frame = 0


Query: 11  LSLLLLFFNHAWAVGLTFNIVNLGAKSDGKIDVSPVLQTAWTKACDSSKPTTIYVPKGIF 70
           L  LL F + + +    FN+V+ GAK DG  D +     AW  AC S+   T+ VPKG F
Sbjct: 11  LFTLLTFIDVSISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPKGTF 70

Query: 71  YVRSVSFNGPCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSIVGGVIDGQGT 130
            ++ ++F GPCK+  IT  + GT++A  + +    +  W+ F+ +N  S+VGG  D +  
Sbjct: 71  LLKVITFGGPCKSK-ITFQVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVGGTFDARAN 130

Query: 131 ALWDCKRSGKSCPNGARSLQINDTKNVNIWSLSSINSQMFNIVVHGCQNVHMTGVSVSSA 190
             W C++SG++CP G RS+  N  K+V I  + S+NSQ+ ++ ++GC NV +  V + + 
Sbjct: 131 GFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNVKLVAP 190

Query: 191 GDSPNTDGIHVQQSSNVTILNSNIGTGDDCISIGPGTSNLWMENITCGPGHGISIGSLGK 250
           G+SPNTDG HVQ S+ VT   S + TGDDC++IGPGT NL +  + CGPGHG+SIGSL K
Sbjct: 191 GNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVSIGSLAK 250

Query: 251 GAEEDGVHNVTVISSTFTGTQNGA------------------------------------ 310
             +EDGV NVTV SS FTG+QNG                                     
Sbjct: 251 ELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPIIIDQNY 310

Query: 311 -----------SGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLNLKDIKLTY-ENQ 346
                      SGVK+S VTY++I GTSAT+ A+   CS  + CTG+ L+DIKLTY +  
Sbjct: 311 CPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYNKGT 370

The following BLAST results are available for this feature:

BLAST of CmoCh19G003480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P48979	3.8e-108	52.86	Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1	[more]
O22818	6.7e-81	44.19	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g4386...	[more]
P35339	2.7e-58	36.19	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1	[more]
P35338	1.4e-57	35.92	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1	[more]
P26216	6.8e-57	35.39	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1	[more]

BLAST of CmoCh19G003480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F386	1.6e-189	88.04	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111439563 PE=3 SV=1	[more]
A0A6J1IDZ8	1.4e-174	82.95	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111474610 PE=3 SV=1	[more]
A0A6J1IEE8	3.1e-174	82.28	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111472461 PE=3 SV=1	[more]
A0A6J1I843	1.9e-150	72.45	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111471802 PE=3 SV=1	[more]
A0A6J1ICG2	1.9e-150	72.45	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111471804 PE=3 SV=1	[more]

BLAST of CmoCh19G003480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59850.1	2.0e-96	46.13	Pectin lyase-like superfamily protein	[more]
AT2G43870.1	6.4e-95	45.55	Pectin lyase-like superfamily protein	[more]
AT2G43860.1	4.8e-82	44.19	Pectin lyase-like superfamily protein	[more]
AT2G43880.1	8.1e-82	41.93	Pectin lyase-like superfamily protein	[more]
AT1G05660.1	2.9e-79	40.73	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 204..225 e-value: 630.0 score: 8.6 coord: 257..281 e-value: 230.0 score: 10.5 coord: 227..247 e-value: 5700.0 score: 1.8 coord: 177..203 e-value: 44.0 score: 13.0
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 21..344 e-value: 5.4E-85 score: 287.8
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 275..332 e-value: 1.7E-9 score: 37.2 coord: 55..273 e-value: 7.6E-55 score: 186.2
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 234..247
None	No IPR available	PANTHER	PTHR31375:SF219	PUTATIVE-RELATED	coord: 6..273
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 274..344 coord: 6..273
None	No IPR available	PANTHER	PTHR31375:SF219	PUTATIVE-RELATED	coord: 274..344
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 11..345

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G003480.1	CmoCh19G003480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006820	anion transport
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004650	polygalacturonase activity