CmoCh19G003430 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTACTCATGTGCCATCATTAAGGTTCGCATAACCAACTTTTATTTAGTAAAAATTTGATAATCTATATGATGATTTGCATTGTTTTCTTAACAAAGAGGGAAGATGAAGACTTGAGGATTGCACAATTGATGAAAATCTCTATTCTTATTGAAAAGGTGATTATTATATTAAATTGGTAATTTATAATTGGCAGCGAGATGATAGAAGCAGTTGGCACGAATTCATAGAAGATTTCTTTGGTTGTTGTGAATCAGTGTTAGAGGAAAATGGTCTTCTTGTTCGGGGTTCAATTAATTTTTTTTTTTTTAACTTTTTAGTGATAATTAATTTTTTTAATTACTCTTTATTTATTATTATTATTATTATTATTATTTTGCATTAGTTCATATTAGTGCCAGACGAGGAGCATCGGCTAAGTTCTGGTTTTATAAAAGAATATATATTTCCAGGAGAGTGCGTACCGTTATTAAGTAGAATAACAACGGCCATGGCTAGTGCATCAAGGCTTTGGTAAATAATTCATTTATGTTCTTCATTTTCAACCATAATTTTAACAATTAATAATGAAAAAAATCCTTTGGGTACCATGTGGAGCACTTGGAAAATATTGGAATTCATTACTATCAAACATTGAGATGTTGGAGAAAGAATTTCTTGAACAATTAACGGTAAGAAACCAAACCATTATTATAATAAATGGTTTTGAATTCCAATCTAATTCATATTTTGTTTCAGCAAAATACTTGAACTCGTGTTCGATCAAGGTTTCATACGAACTTGGGAATACTATTTTGATTACTGTGCTGCTGGGTTTAAATCACAAACCCTTGAAGATTATCAGGTAATCATATTTTTACGTAAGATATGAAATTAATGTTAAGAATTGTAACCGCCTTAGTTTTCTAGAGATCTAAAGTCGCTACAGTATGTACGACATAACTTTTCATGCATAAATATTTACCAACATTTTCATAAAACAATTTCATAAACTTAGAAATATTAGATAAAAGAAAATAGATATTAAAAGTGACAATGTCCTATTGTAACCTAAGGTCTAAGAATTTAAATACAACTGTTATATGCATGTGTCATAATCTTTACTTGCAATATCCTCGTCAGCTATACATGAATCGGAAATTTTATATATATATCAGACTAAATATGTAATTGAAATATTTAAATTAAAATTATATAATGGCAGATTGTGTTTTCCAGGGAGGGTAATGCGGCATTCAACAACTTTGAAGAATCCATATGAAGAAATAGCTTCAGTATTCAACAACAACTTTGAAGAATTGCCTTTCACCATATTGAATTTCTTTCTTTGA ATGATGTACTCATGTGCCATCATTAAGAGGGAAGATGAAGACTTGAGGATTGCACAATTGATGAAAATCTCTATTCTTATTGAAAAGCGAGATGATAGAAGCAGTTGGCACGAATTCATAGAAGATTTCTTTGGTTGTTGTGAATCAGTGTTAGAGGAAAATGGTCTTCTTTTCATATTAGTGCCAGACGAGGAGCATCGGCTAAGTTCTGGTTTTATAAAAGAATATATATTTCCAGGAGAGTGCGTACCGTTATTAAGTAGAATAACAACGGCCATGGCTACAAAATACTTGAACTCGTGTTCGATCAAGGTTTCATACGAACTTGGGAATACTATTTTGATTACTGTGCTGCTGGGGAGGGTAATGCGGCATTCAACAACTTTGAAGAATCCATATGAAGAAATAGCTTCAGTATTCAACAACAACTTTGAAGAATTGCCTTTCACCATATTGAATTTCTTTCTTTGA ATGATGTACTCATGTGCCATCATTAAGAGGGAAGATGAAGACTTGAGGATTGCACAATTGATGAAAATCTCTATTCTTATTGAAAAGCGAGATGATAGAAGCAGTTGGCACGAATTCATAGAAGATTTCTTTGGTTGTTGTGAATCAGTGTTAGAGGAAAATGGTCTTCTTTTCATATTAGTGCCAGACGAGGAGCATCGGCTAAGTTCTGGTTTTATAAAAGAATATATATTTCCAGGAGAGTGCGTACCGTTATTAAGTAGAATAACAACGGCCATGGCTACAAAATACTTGAACTCGTGTTCGATCAAGGTTTCATACGAACTTGGGAATACTATTTTGATTACTGTGCTGCTGGGGAGGGTAATGCGGCATTCAACAACTTTGAAGAATCCATATGAAGAAATAGCTTCAGTATTCAACAACAACTTTGAAGAATTGCCTTTCACCATATTGAATTTCTTTCTTTGA MMYSCAIIKREDEDLRIAQLMKISILIEKRDDRSSWHEFIEDFFGCCESVLEENGLLFILVPDEEHRLSSGFIKEYIFPGECVPLLSRITTAMATKYLNSCSIKVSYELGNTILITVLLGRVMRHSTTLKNPYEEIASVFNNNFEELPFTILNFFL Homology
BLAST of CmoCh19G003430 vs. ExPASy TrEMBL
Match: A0A6J1EXS1 (uncharacterized protein LOC111439562 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439562 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 4.0e-20 Identity = 92/277 (33.21%), Postives = 114/277 (41.16%), Query Frame = 0
BLAST of CmoCh19G003430 vs. ExPASy TrEMBL
Match: A0A6J1IB60 (uncharacterized protein LOC111473008 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473008 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 2.0e-19 Identity = 75/180 (41.67%), Postives = 83/180 (46.11%), Query Frame = 0
BLAST of CmoCh19G003430 vs. ExPASy TrEMBL
Match: A0A6J1ICH0 (uncharacterized protein LOC111472470 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472470 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 2.0e-19 Identity = 75/180 (41.67%), Postives = 83/180 (46.11%), Query Frame = 0
BLAST of CmoCh19G003430 vs. ExPASy TrEMBL
Match: A0A6J1IB85 (LOW QUALITY PROTEIN: uncharacterized protein LOC111473548 OS=Cucurbita maxima OX=3661 GN=LOC111473548 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 3.4e-19 Identity = 75/180 (41.67%), Postives = 83/180 (46.11%), Query Frame = 0
BLAST of CmoCh19G003430 vs. ExPASy TrEMBL
Match: A0A5D3BBE9 (Cyclopropane-fatty-acyl-phospholipid synthase-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00150 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 4.9e-18 Identity = 70/179 (39.11%), Postives = 80/179 (44.69%), Query Frame = 0
BLAST of CmoCh19G003430 vs. TAIR 10
Match: AT3G23530.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 78.6 bits (192), Expect = 5.0e-15 Identity = 60/180 (33.33%), Postives = 77/180 (42.78%), Query Frame = 0
BLAST of CmoCh19G003430 vs. TAIR 10
Match: AT3G23470.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 77.0 bits (188), Expect = 1.5e-14 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 0
HSP 2 Score: 40.8 bits (94), Expect = 1.2e-03 Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 0
BLAST of CmoCh19G003430 vs. TAIR 10
Match: AT3G23510.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 74.3 bits (181), Expect = 9.5e-14 Identity = 58/180 (32.22%), Postives = 76/180 (42.22%), Query Frame = 0
BLAST of CmoCh19G003430 vs. TAIR 10
Match: AT3G23480.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 71.6 bits (174), Expect = 6.2e-13 Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 0
HSP 2 Score: 40.0 bits (92), Expect = 2.0e-03 Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of CmoCh19G003430 vs. TAIR 10
Match: AT3G23480.2 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 71.6 bits (174), Expect = 6.2e-13 Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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