CmoCh19G003300 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G003300
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Transmembrane emp24 domain-containing protein
Location	Cmo_Chr19: 2716980 .. 2720556 (+)
RNA-Seq Expression	CmoCh19G003300
Synteny	CmoCh19G003300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTGAAAAAACCAAATCCAAACAGCGCGAAAGCTCTAAAAAACCAACGCCAACCGCATCCAAAGCCATTAAAGCTCCAACGCCGAGCCTACCATTTACATCCAAACCCGTTTTACTCTTCTTTCATTTCAACGTTTCTCTTCTCTCTCTAGTTTTCTACTATTCAACGGAGAGAGAGAGGGCGTCTCATCTCGTTTTTTAGCACCCAGAATCGGAGAACACAGCAATGGAACCCCGGAAGATGATTCTCCCGTGTTTGCTGTTGATTTTGACCTTCTTGGCGACGGATCTTGTGCGTCCTACTTATGCTATTTGGCTTAACATTCCTTCTACCGGAACCAAGTGCGTCTCTGAGGAAATCCAGAGCAACGTCGTTGTTATGGCTGATTATGTTGTAATCTCTGAGAATTACACCCATACGCCCACCATTTCCGTCAAGGTGAGCCCTCGATCGGTCAACGCTAGGATTTTTCTAGGGTTTTTTATTTTGTTCCTGCTGGTTTTCGGGCTGATTGAATATAGAATCCTATGAAATGTTTTTACCGGTAGTTCTGATTCATTATCTTTGACGGATTGAATTCTGATTCATTATTCTGTGAGGACATTTTTCATGTGTGTTTTAGTTTTGTATTATCCTCGAATATGACGGAGAAAGAATGTTATTGTGTTCCACATCCATATATAATTATTAGTAGACAGACTGGTTATTGGTGAAGGACACTGGGATTATATGAACGGTGGTAGGCTCATTATTACCTGTTGGGTTCTCTTGCCCAAGCCACATATTGTTCTCTTTGAGTTTTTCCTTCCGAATTTTTCCTCAAGGTTTTAAAATGCGTCCACTAGGGAGAGGTTTCCACACCCTTATAAGGAATGGTTTGTTCCCCTCACCAACAAATATGGGATCTCACAATCCACTCCCCTTAGGGACAGTCTTAAAATGCGTCCACTACCTTCTAAGGAATGTTTCGTTCCCCTCTCCTCCAACCCATGTGATATCTCACAATCCACCCCTTGACCAGCGTCTTAAAATGCGTCCACTAGACATTAGTTTCCACACCCTTATAAGGAATGTTTTGTTCCCCTCTCCAACGGACGTGGGATCTCACAATCCAACCCCCAGGAGTCCAACGTCCTTGTTGGCATTACTGCTCGGTGTTTGGTTTTGATACCCCTTGGTGGCTGTTACATGTGATATATTTGATTTCATTCAGGGGGCTTTTACCTTAACCCCTTGGGGGCTGTTACATGTGATATATTTGATTTCATTCAGGGGGCTTTTACCTTAATCCCTTGGGCTTTTGTAGAGTTTGGTTTTAAAGTCGATTTCCATGCAATTCGTTTTTTAGTCTCTTCAAATTATAAGAACCTCCAGATTTTTTTTCTTCATTAGTTGCCAATTCTATCTATCTTAAGCGAATGTGAAGAAAATATCCAAAAACTTGCCTATGTCTTGATATATGTCTTTGTATCTTTGGCTTATTATTCAATCTGTAATTTGTTTTCCCTCAGGTAACATCACCATACGGTAACAACCTCCACTATAAGGAGAATCAAACGAGTGGGCAATTTGCATTCACCACAGCGGAGGCTGGCAACCATCTGGCATGCTTTTGGATTGATGGCCATAATCAGGGTGGTGCTGATGCTAGCTTAAATCTCGAATGGAGAACTGGAATTTCAGCTAAGGATTGGGAGTCAGTTGCAAAAAAGGAAAAAATTGAGGTGTGTTTTCTCCTTAAGCTGATTCATACACTTCCAAGATATGTTTCACATTGAGTTTCCTCTTGTTCCTAATCCTCGTCGAATAGAAGAAAAAAAACGAAAAAGTAGAAGAAATTTGAGCTTTGTTTTCTTCTTAATCCTCTTGTTTCTTCTTAAAATGCCAAGATTTTTGCATATCTATCTACTATCTAAACTTTATTCGAAACCTATCATCAGTATTGTGGCTCCTAAAAGCCAAAGACGAAAGGAAAACTTTTAACTTTCTTGGGACACTTGTGCTTCAAAATTATGCTAGTCGAATGCCGAGATTAAGACTGTGAACCTGCTCTTTATGCAGCTCAGCTATGGTATTTTATTGAAATTGATAGGCTAAGGGCTCTTAAAATGGGAAAATAACAAGAATTCTTTGTTGACCATTTGGTCAATCGTGTAGAATGAGTTCAATAACTGTAGAAAACATCAAATGTATGAATTAAAGCTAGCAAATCTTTGGTTGAGGCCTTACTCTTCCTCTTATTATAATGGGTATATATATAATTTCATTCATCAATGAAATGCTTGGTACCTCCTTGATTAAGTTTTTTCCCTCCTCACCTTCTCATTTTCTGTAGTCATATTTTGACTTGTCTAATTTTAGTATACCCGTTTTGGTTGCTTGGTATTAAACAAAGAGGGAGTTTAGGGCTCTCTTGTGAGCATGAACCAGAAAGATAGAAATTACAAGCCAAATACAATAATGAGAGAATGGAGGGAAAGAGTTGGGGTAAATGTTAGGATCACACAACAACGCACACATTCGATCTAGACAAACACAAAAAATCGGAGAGAGAAAATGCAAAGAGGAATATTAGCTAAAAGTTTATATAGATGACTTTAGGTATATACAGCAGATTAAAGAGAATGTAGATCCTACATCTTCAAAGGAGGATTGACTAGGGGTATAGATATGGTTTCCGTTTACTATGTATAGTTTTAAAAAAGCACTTCAATATATATATATATATATATAGTTTTAGTGCACTTCTATATACTTCAAAAAATATATATATATATATAGTTTTAGTTTATTATATATAGCTTTAACAGATATAACCACATAAATATCTACTTATATATTTCTTCTACATTTGTATTATAAATAGTTGTTTACATGTTTACTATGTTCGATATATAGTTTTACCATCCGTAGCCATTTGAATGGTTGAACCCGTCAAAAATATAGTTTTACTATCTGTAACTTATGAAAAATGTATAGTTTTACTATCTGTAACCATTTACATTGAATAAGCTGAGAATTAGATGGAGACCCGTGGTTGAACACCATGAAAAATAGAGACTGAAGTCTAAGAGAGAGCATGCTAGAATTAACCTTGAAGTTATTTCCAAATTGCTAACTTTCAGGGTGTTGAGCTGGAGCTCCGGAAACTTGAAGGGTTGGTAGAGGCCATTCATGGGAATCTTCTGTATCTGAAGCGCAGGTAATCTATCTATGTGCCAAAACTCTTCAACTTCTATACAAAATATTTTGTGGATGAATGAGTTAAGTAATGATTTGGGAATGTGTGTGTATATATATATATGAACTACAGGGAAGCAGATATGAGGATAGTAAGTGAAAAGACAAATGGAAGAGTGGCGTGGTTTAGCATAATGTCCTTAGGTGTATGTATTTTGGCTTCCGCACTTCAACTCTGGTACTTGAAGCGCTTCTTCCAGAAAAAGAAGCTCATCTAAAATAGTGTTCTTCTCTACCTTTGTGACTTTTTTTTTCTTACACCAAAAAGGCATGATACTAGCTTGTAAACTATGAACCTCTCTAATAAAATTTATCACAGGAATGTTTTATCATGG

mRNA sequence

GAATTGAAAAAACCAAATCCAAACAGCGCGAAAGCTCTAAAAAACCAACGCCAACCGCATCCAAAGCCATTAAAGCTCCAACGCCGAGCCTACCATTTACATCCAAACCCGTTTTACTCTTCTTTCATTTCAACGTTTCTCTTCTCTCTCTAGTTTTCTACTATTCAACGGAGAGAGAGAGGGCGTCTCATCTCGTTTTTTAGCACCCAGAATCGGAGAACACAGCAATGGAACCCCGGAAGATGATTCTCCCGTGTTTGCTGTTGATTTTGACCTTCTTGGCGACGGATCTTGTGCGTCCTACTTATGCTATTTGGCTTAACATTCCTTCTACCGGAACCAAGTGCGTCTCTGAGGAAATCCAGAGCAACGTCGTTGTTATGGCTGATTATGTTGTAATCTCTGAGAATTACACCCATACGCCCACCATTTCCGTCAAGGTAACATCACCATACGGTAACAACCTCCACTATAAGGAGAATCAAACGAGTGGGCAATTTGCATTCACCACAGCGGAGGCTGGCAACCATCTGGCATGCTTTTGGATTGATGGCCATAATCAGGGTGGTGCTGATGCTAGCTTAAATCTCGAATGGAGAACTGGAATTTCAGCTAAGGATTGGGAGTCAGTTGCAAAAAAGGAAAAAATTGAGGGTGTTGAGCTGGAGCTCCGGAAACTTGAAGGGTTGGTAGAGGCCATTCATGGGAATCTTCTGTATCTGAAGCGCAGGGAAGCAGATATGAGGATAGTAAGTGAAAAGACAAATGGAAGAGTGGCGTGGTTTAGCATAATGTCCTTAGGTGTATGTATTTTGGCTTCCGCACTTCAACTCTGGTACTTGAAGCGCTTCTTCCAGAAAAAGAAGCTCATCTAAAATAGTGTTCTTCTCTACCTTTGTGACTTTTTTTTTCTTACACCAAAAAGGCATGATACTAGCTTGTAAACTATGAACCTCTCTAATAAAATTTATCACAGGAATGTTTTATCATGG

Coding sequence (CDS)

ATGGAACCCCGGAAGATGATTCTCCCGTGTTTGCTGTTGATTTTGACCTTCTTGGCGACGGATCTTGTGCGTCCTACTTATGCTATTTGGCTTAACATTCCTTCTACCGGAACCAAGTGCGTCTCTGAGGAAATCCAGAGCAACGTCGTTGTTATGGCTGATTATGTTGTAATCTCTGAGAATTACACCCATACGCCCACCATTTCCGTCAAGGTAACATCACCATACGGTAACAACCTCCACTATAAGGAGAATCAAACGAGTGGGCAATTTGCATTCACCACAGCGGAGGCTGGCAACCATCTGGCATGCTTTTGGATTGATGGCCATAATCAGGGTGGTGCTGATGCTAGCTTAAATCTCGAATGGAGAACTGGAATTTCAGCTAAGGATTGGGAGTCAGTTGCAAAAAAGGAAAAAATTGAGGGTGTTGAGCTGGAGCTCCGGAAACTTGAAGGGTTGGTAGAGGCCATTCATGGGAATCTTCTGTATCTGAAGCGCAGGGAAGCAGATATGAGGATAGTAAGTGAAAAGACAAATGGAAGAGTGGCGTGGTTTAGCATAATGTCCTTAGGTGTATGTATTTTGGCTTCCGCACTTCAACTCTGGTACTTGAAGCGCTTCTTCCAGAAAAAGAAGCTCATCTAA

Protein sequence

MEPRKMILPCLLLILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISENYTHTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLNLEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTNGRVAWFSIMSLGVCILASALQLWYLKRFFQKKKLI

Homology

[Close]

BLAST of CmoCh19G003300 vs. ExPASy Swiss-Prot
Match: Q6IDL4 (Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana OX=3702 GN=At1g09580 PE=1 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 9.0e-76
Identity = 138/202 (68.32%), Postives = 167/202 (82.67%), Query Frame = 0


Query: 14  ILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISENYTHTPTISVKVT 73
           +L FL   ++    A+WL++P TGTKCVSEEIQSNVVV+ADY++ISE++   PTISVKVT
Sbjct: 16  LLLFLVPVMIPVGEAVWLDVPPTGTKCVSEEIQSNVVVLADYLIISEDHEVMPTISVKVT 75

Query: 74  SPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLNLEWRTGISAKDWE 133
           SPYGNNLH  EN T GQFAFTT E+GN+LACFW D  + G  + S+N++WRTGI+AKDW 
Sbjct: 76  SPYGNNLHNMENVTHGQFAFTTQESGNYLACFWADEKSHGNKNVSINIDWRTGIAAKDWA 135

Query: 134 SVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTNGRVAWFSIMSLGV 193
           S+AKKEKIEGVELE+RKLEG VEAIH N+LYL+ READMR +SEKTN RVAW+SIMSLGV
Sbjct: 136 SIAKKEKIEGVELEIRKLEGAVEAIHENILYLRNREADMRTMSEKTNSRVAWYSIMSLGV 195

Query: 194 CILASALQLWYLKRFFQKKKLI 216
           CI  S  Q+ YLK++F+KKKLI
Sbjct: 196 CIAVSGFQVLYLKQYFEKKKLI 217

[Close]

BLAST of CmoCh19G003300 vs. ExPASy Swiss-Prot
Match: Q9FVU0 (Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana OX=3702 GN=CYB PE=1 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 7.9e-72
Identity = 133/212 (62.74%), Postives = 173/212 (81.60%), Query Frame = 0


Query: 4   RKMILPCLLLILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISENYT 63
           +K ++P  +L L+ L   L     A+WL +P TG+KCVSEEIQSNV+V+ADY+VISE ++
Sbjct: 2   KKKMIPTTIL-LSALIFSLSPICEAVWLTVPHTGSKCVSEEIQSNVIVLADYLVISEEHS 61

Query: 64  HTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLNLEW 123
             PT+SVKVT+PYG  LH++EN T+GQFAFTT E+G +LACF  D  + G  D S+N++W
Sbjct: 62  IFPTVSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKSHGNKDFSINIDW 121

Query: 124 RTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTNGRV 183
           +TGI+AKDW+S+A+KEKIEGVELE +KLEG VEAIH NL+YL+ REA+MRIVSEKTN RV
Sbjct: 122 KTGIAAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSRV 181

Query: 184 AWFSIMSLGVCILASALQLWYLKRFFQKKKLI 216
           AW+SIMSLG+CI+ S LQ+ YLK++F+KKKLI
Sbjct: 182 AWYSIMSLGICIVVSGLQILYLKQYFEKKKLI 212

[Close]

BLAST of CmoCh19G003300 vs. ExPASy Swiss-Prot
Match: Q8RWM6 (Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana OX=3702 GN=At1g21900 PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 4.9e-66
Identity = 135/207 (65.22%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 11  LLLILTFLATDLVRPTYAIWLNIPST-GTKCVSEEIQSNVVVMADYVVISE-NYTHTPTI 70
           L ++L FL    V    AIWL IP+T GTKCVSEEIQSNVVV+ADY V+ E N  +TP +
Sbjct: 13  LTVVLFFLT---VNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHNPENTPAV 72

Query: 71  SVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLNLEWRTGIS 130
           S KVTSPYGNNLH++EN T GQFAFTT EAGN+LACFWID  +      +L ++W+ GI+
Sbjct: 73  SSKVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWIDSSHHLANPITLGVDWKMGIA 132

Query: 131 AKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTNGRVAWFSI 190
           AKDW+SVAKKEKIEGVEL+LR+LEGLV +I  NL Y+K REA+MR VSE TN RVAWFSI
Sbjct: 133 AKDWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRVAWFSI 192

Query: 191 MSLGVCILASALQLWYLKRFFQKKKLI 216
           MSLGVC++    Q+ YLKR+F KKKLI
Sbjct: 193 MSLGVCVVVVGSQILYLKRYFHKKKLI 216

[Close]

BLAST of CmoCh19G003300 vs. ExPASy Swiss-Prot
Match: F4J4Y0 (Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana OX=3702 GN=At3g10780 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-47
Identity = 109/215 (50.70%), Postives = 142/215 (66.05%), Query Frame = 0


Query: 7   ILPCLLLILTFLA--TDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISENYTH 66
           I P L + L +LA    L     AIWL +P +G +CV EEIQ+NVVV+ DY+ I + +T 
Sbjct: 3   ISPVLFIGLIYLAGGGSLFPGVEAIWLTVPESGERCVYEEIQANVVVVLDYICIDDAFTQ 62

Query: 67  T-PTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWI---DGHNQGGADASLN 126
             PT+ V+VTSPYG  L+   N T GQ AFTT+E+G  LAC  +     H+   +   ++
Sbjct: 63  LGPTLDVRVTSPYGKELYKIANVTHGQAAFTTSESGTFLACLAMHHDQSHHSVNSSVIVS 122

Query: 127 LEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTN 186
           L+W+ GI AKDW+SVAKKEKIEGVELE+R+      AI  N+LYL+ REA MR ++EKTN
Sbjct: 123 LDWKMGIRAKDWDSVAKKEKIEGVELEIRRSTEYASAIRANILYLRIREAYMREINEKTN 182

Query: 187 GRVAWFSIMSLGVCILASALQLWYLKRFFQKKKLI 216
            RV    +MSLGV I+ S  Q+ YLKR+F KKKLI
Sbjct: 183 TRVNQLGLMSLGVAIVVSISQVLYLKRYFLKKKLI 217

[Close]

BLAST of CmoCh19G003300 vs. ExPASy Swiss-Prot
Match: Q9LQY3 (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana OX=3702 GN=At1g26690 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.7e-37
Identity = 82/209 (39.23%), Postives = 133/209 (63.64%), Query Frame = 0


Query: 11  LLLILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISENYTH----TP 70
           L  IL FLA    + + ++   + S  TKC+SE+I+SN + +  Y V++ N  H    + 
Sbjct: 8   LCTILLFLAIS-SQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTVVNPNEAHPSPQSH 67

Query: 71  TISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLNLEWRTG 130
            IS++VTS YGN  H+ E+  SGQFAFT  E+G+++AC+    H +     S++ +WRTG
Sbjct: 68  KISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVDH-KPEVTLSIDFDWRTG 127

Query: 131 ISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTNGRVAWF 190
           + +K W SVAKK ++E +E ++++L   V +IH  + YL+ RE +M+ ++  TN ++AW 
Sbjct: 128 VQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKMAWL 187

Query: 191 SIMSLGVCILASALQLWYLKRFFQKKKLI 216
           S +SL VC+  + +Q  +LK FF+KKK+I
Sbjct: 188 SFLSLFVCLGVAGMQFVHLKTFFEKKKVI 214

[Close]

BLAST of CmoCh19G003300 vs. ExPASy TrEMBL
Match: A0A6J1HGJ9 (transmembrane emp24 domain-containing protein p24delta3-like OS=Cucurbita moschata OX=3662 GN=LOC111464101 PE=3 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.4e-116
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MEPRKMILPCLLLILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISE 60
           MEPRKMILPCLLLILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISE
Sbjct: 1   MEPRKMILPCLLLILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISE 60

Query: 61  NYTHTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLN 120
           NYTHTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLN
Sbjct: 61  NYTHTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLN 120

Query: 121 LEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTN 180
           LEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTN
Sbjct: 121 LEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTN 180

Query: 181 GRVAWFSIMSLGVCILASALQLWYLKRFFQKKKLI 216
           GRVAWFSIMSLGVCILASALQLWYLKRFFQKKKLI
Sbjct: 181 GRVAWFSIMSLGVCILASALQLWYLKRFFQKKKLI 215

[Close]

BLAST of CmoCh19G003300 vs. ExPASy TrEMBL
Match: A0A6J1HR23 (transmembrane emp24 domain-containing protein p24delta3-like OS=Cucurbita maxima OX=3661 GN=LOC111467003 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.7e-114
Identity = 211/215 (98.14%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MEPRKMILPCLLLILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISE 60
           MEPRKMILPCLLL+LTFLATDLVRPT+AIWLNIPSTGTKCVSEEIQSNVVVMADYVVISE
Sbjct: 1   MEPRKMILPCLLLVLTFLATDLVRPTHAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISE 60

Query: 61  NYTHTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLN 120
           NYTHTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGG DASLN
Sbjct: 61  NYTHTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGGDASLN 120

Query: 121 LEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTN 180
           LEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTN
Sbjct: 121 LEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTN 180

Query: 181 GRVAWFSIMSLGVCILASALQLWYLKRFFQKKKLI 216
           GRVAWFSIMSLGVCILASALQLWYL RFFQKKKLI
Sbjct: 181 GRVAWFSIMSLGVCILASALQLWYLTRFFQKKKLI 215

[Close]

BLAST of CmoCh19G003300 vs. ExPASy TrEMBL
Match: A0A6J1JR63 (transmembrane emp24 domain-containing protein p24delta4-like OS=Cucurbita maxima OX=3661 GN=LOC111486723 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.4e-101
Identity = 185/215 (86.05%), Postives = 203/215 (94.42%), Query Frame = 0


Query: 1   MEPRKMILPCLLLILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISE 60
           ME R+MILP LLLIL+FLA DLVRPT+AIW N+PSTGTKCVSEEI +NVVV+ADYVVISE
Sbjct: 1   MEQRRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISE 60

Query: 61  NYTHTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLN 120
           NYTH PT+SVKVTSPYGNNL++KENQT+GQFAFTTAEAGNHLACFWIDGH++ G D SL+
Sbjct: 61  NYTHAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLS 120

Query: 121 LEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTN 180
           LEWRTGI+AKDWESVA+KEKIEGVELELRKLEG+VEAIH N+LYLK REA+MRIVSEKTN
Sbjct: 121 LEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTN 180

Query: 181 GRVAWFSIMSLGVCILASALQLWYLKRFFQKKKLI 216
           GRVAWFSIMSLGVCILAS LQLWYLKRFFQKKKLI
Sbjct: 181 GRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 215

[Close]

BLAST of CmoCh19G003300 vs. ExPASy TrEMBL
Match: A0A6J1EQ97 (transmembrane emp24 domain-containing protein p24delta4-like OS=Cucurbita moschata OX=3662 GN=LOC111434689 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.4e-101
Identity = 185/215 (86.05%), Postives = 203/215 (94.42%), Query Frame = 0


Query: 1   MEPRKMILPCLLLILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISE 60
           ME R+MILP LLLIL+FLA DLVRPT+AIW N+PSTGTKCVSEEI +NVVV+ADYVVISE
Sbjct: 1   MERRRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISE 60

Query: 61  NYTHTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLN 120
           NYTH PT+SVKVTSPYGNNL++KENQT+GQFAFTTAEAGNHLACFWIDGH++ G D SL+
Sbjct: 61  NYTHAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLS 120

Query: 121 LEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTN 180
           LEWRTGI+AKDWESVA+KEKIEGVELELRKLEG+VEAIH N+LYLK REA+MRIVSEKTN
Sbjct: 121 LEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTN 180

Query: 181 GRVAWFSIMSLGVCILASALQLWYLKRFFQKKKLI 216
           GRVAWFSIMSLGVCILAS LQLWYLKRFFQKKKLI
Sbjct: 181 GRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 215

[Close]

BLAST of CmoCh19G003300 vs. ExPASy TrEMBL
Match: A0A5D3CTD0 (Transmembrane emp24 domain-containing protein p24delta3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00250 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.4e-100
Identity = 184/215 (85.58%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MEPRKMILPCLLLILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISE 60
           ME  +MILP  LLI TFL TDL+RPT+AIWLN+PSTGTKCVSEEI SNVVV+ADYVVISE
Sbjct: 1   MEHWRMILPSFLLIFTFLVTDLLRPTHAIWLNLPSTGTKCVSEEIHSNVVVLADYVVISE 60

Query: 61  NYTHTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLN 120
           NYTHTPT+SVKVTSPYGNNLH KENQT+GQFAFTTAEAGNHLACFW+DGH+QGG + SLN
Sbjct: 61  NYTHTPTVSVKVTSPYGNNLHQKENQTTGQFAFTTAEAGNHLACFWVDGHHQGGGEVSLN 120

Query: 121 LEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTN 180
           L+WRTGISAKDW+SVAKKEKIEGV+LEL KLEG V+AIH NL+YLK READMRIVSEKTN
Sbjct: 121 LDWRTGISAKDWDSVAKKEKIEGVQLELLKLEGAVQAIHENLIYLKNREADMRIVSEKTN 180

Query: 181 GRVAWFSIMSLGVCILASALQLWYLKRFFQKKKLI 216
           GRVAWFSIMSLGVCI ASALQLWYLKRFF KKKLI
Sbjct: 181 GRVAWFSIMSLGVCIFASALQLWYLKRFFHKKKLI 215

[Close]

BLAST of CmoCh19G003300 vs. TAIR 10
Match: AT1G09580.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 284.6 bits (727), Expect = 6.4e-77
Identity = 138/202 (68.32%), Postives = 167/202 (82.67%), Query Frame = 0


Query: 14  ILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISENYTHTPTISVKVT 73
           +L FL   ++    A+WL++P TGTKCVSEEIQSNVVV+ADY++ISE++   PTISVKVT
Sbjct: 16  LLLFLVPVMIPVGEAVWLDVPPTGTKCVSEEIQSNVVVLADYLIISEDHEVMPTISVKVT 75

Query: 74  SPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLNLEWRTGISAKDWE 133
           SPYGNNLH  EN T GQFAFTT E+GN+LACFW D  + G  + S+N++WRTGI+AKDW 
Sbjct: 76  SPYGNNLHNMENVTHGQFAFTTQESGNYLACFWADEKSHGNKNVSINIDWRTGIAAKDWA 135

Query: 134 SVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTNGRVAWFSIMSLGV 193
           S+AKKEKIEGVELE+RKLEG VEAIH N+LYL+ READMR +SEKTN RVAW+SIMSLGV
Sbjct: 136 SIAKKEKIEGVELEIRKLEGAVEAIHENILYLRNREADMRTMSEKTNSRVAWYSIMSLGV 195

Query: 194 CILASALQLWYLKRFFQKKKLI 216
           CI  S  Q+ YLK++F+KKKLI
Sbjct: 196 CIAVSGFQVLYLKQYFEKKKLI 217

[Close]

BLAST of CmoCh19G003300 vs. TAIR 10
Match: AT1G57620.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 271.6 bits (693), Expect = 5.6e-73
Identity = 133/212 (62.74%), Postives = 173/212 (81.60%), Query Frame = 0


Query: 4   RKMILPCLLLILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISENYT 63
           +K ++P  +L L+ L   L     A+WL +P TG+KCVSEEIQSNV+V+ADY+VISE ++
Sbjct: 2   KKKMIPTTIL-LSALIFSLSPICEAVWLTVPHTGSKCVSEEIQSNVIVLADYLVISEEHS 61

Query: 64  HTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLNLEW 123
             PT+SVKVT+PYG  LH++EN T+GQFAFTT E+G +LACF  D  + G  D S+N++W
Sbjct: 62  IFPTVSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKSHGNKDFSINIDW 121

Query: 124 RTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTNGRV 183
           +TGI+AKDW+S+A+KEKIEGVELE +KLEG VEAIH NL+YL+ REA+MRIVSEKTN RV
Sbjct: 122 KTGIAAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSRV 181

Query: 184 AWFSIMSLGVCILASALQLWYLKRFFQKKKLI 216
           AW+SIMSLG+CI+ S LQ+ YLK++F+KKKLI
Sbjct: 182 AWYSIMSLGICIVVSGLQILYLKQYFEKKKLI 212

[Close]

BLAST of CmoCh19G003300 vs. TAIR 10
Match: AT1G21900.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 252.3 bits (643), Expect = 3.5e-67
Identity = 135/207 (65.22%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 11  LLLILTFLATDLVRPTYAIWLNIPST-GTKCVSEEIQSNVVVMADYVVISE-NYTHTPTI 70
           L ++L FL    V    AIWL IP+T GTKCVSEEIQSNVVV+ADY V+ E N  +TP +
Sbjct: 13  LTVVLFFLT---VNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHNPENTPAV 72

Query: 71  SVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLNLEWRTGIS 130
           S KVTSPYGNNLH++EN T GQFAFTT EAGN+LACFWID  +      +L ++W+ GI+
Sbjct: 73  SSKVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWIDSSHHLANPITLGVDWKMGIA 132

Query: 131 AKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTNGRVAWFSI 190
           AKDW+SVAKKEKIEGVEL+LR+LEGLV +I  NL Y+K REA+MR VSE TN RVAWFSI
Sbjct: 133 AKDWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRVAWFSI 192

Query: 191 MSLGVCILASALQLWYLKRFFQKKKLI 216
           MSLGVC++    Q+ YLKR+F KKKLI
Sbjct: 193 MSLGVCVVVVGSQILYLKRYFHKKKLI 216

[Close]

BLAST of CmoCh19G003300 vs. TAIR 10
Match: AT3G10780.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 190.7 bits (483), Expect = 1.3e-48
Identity = 109/215 (50.70%), Postives = 142/215 (66.05%), Query Frame = 0


Query: 7   ILPCLLLILTFLA--TDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISENYTH 66
           I P L + L +LA    L     AIWL +P +G +CV EEIQ+NVVV+ DY+ I + +T 
Sbjct: 3   ISPVLFIGLIYLAGGGSLFPGVEAIWLTVPESGERCVYEEIQANVVVVLDYICIDDAFTQ 62

Query: 67  T-PTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWI---DGHNQGGADASLN 126
             PT+ V+VTSPYG  L+   N T GQ AFTT+E+G  LAC  +     H+   +   ++
Sbjct: 63  LGPTLDVRVTSPYGKELYKIANVTHGQAAFTTSESGTFLACLAMHHDQSHHSVNSSVIVS 122

Query: 127 LEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTN 186
           L+W+ GI AKDW+SVAKKEKIEGVELE+R+      AI  N+LYL+ REA MR ++EKTN
Sbjct: 123 LDWKMGIRAKDWDSVAKKEKIEGVELEIRRSTEYASAIRANILYLRIREAYMREINEKTN 182

Query: 187 GRVAWFSIMSLGVCILASALQLWYLKRFFQKKKLI 216
            RV    +MSLGV I+ S  Q+ YLKR+F KKKLI
Sbjct: 183 TRVNQLGLMSLGVAIVVSISQVLYLKRYFLKKKLI 217

[Close]

BLAST of CmoCh19G003300 vs. TAIR 10
Match: AT1G26690.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 156.4 bits (394), Expect = 2.6e-38
Identity = 82/209 (39.23%), Postives = 133/209 (63.64%), Query Frame = 0


Query: 11  LLLILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISENYTH----TP 70
           L  IL FLA    + + ++   + S  TKC+SE+I+SN + +  Y V++ N  H    + 
Sbjct: 8   LCTILLFLAIS-SQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTVVNPNEAHPSPQSH 67

Query: 71  TISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLNLEWRTG 130
            IS++VTS YGN  H+ E+  SGQFAFT  E+G+++AC+    H +     S++ +WRTG
Sbjct: 68  KISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVDH-KPEVTLSIDFDWRTG 127

Query: 131 ISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTNGRVAWF 190
           + +K W SVAKK ++E +E ++++L   V +IH  + YL+ RE +M+ ++  TN ++AW 
Sbjct: 128 VQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKMAWL 187

Query: 191 SIMSLGVCILASALQLWYLKRFFQKKKLI 216
           S +SL VC+  + +Q  +LK FF+KKK+I
Sbjct: 188 SFLSLFVCLGVAGMQFVHLKTFFEKKKVI 214

The following BLAST results are available for this feature:

BLAST of CmoCh19G003300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IDL4	9.0e-76	68.32	Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana ...	[more]
Q9FVU0	7.9e-72	62.74	Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana ...	[more]
Q8RWM6	4.9e-66	65.22	Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana ...	[more]
F4J4Y0	1.8e-47	50.70	Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana ...	[more]
Q9LQY3	3.7e-37	39.23	Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana ...	[more]

BLAST of CmoCh19G003300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGJ9	2.4e-116	100.00	transmembrane emp24 domain-containing protein p24delta3-like OS=Cucurbita moscha...	[more]
A0A6J1HR23	1.7e-114	98.14	transmembrane emp24 domain-containing protein p24delta3-like OS=Cucurbita maxima...	[more]
A0A6J1JR63	6.4e-101	86.05	transmembrane emp24 domain-containing protein p24delta4-like OS=Cucurbita maxima...	[more]
A0A6J1EQ97	8.4e-101	86.05	transmembrane emp24 domain-containing protein p24delta4-like OS=Cucurbita moscha...	[more]
A0A5D3CTD0	2.4e-100	85.58	Transmembrane emp24 domain-containing protein p24delta3-like OS=Cucumis melo var...	[more]

BLAST of CmoCh19G003300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09580.1	6.4e-77	68.32	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G57620.1	5.6e-73	62.74	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G21900.1	3.5e-67	65.22	emp24/gp25L/p24 family/GOLD family protein	[more]
AT3G10780.1	1.3e-48	50.70	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G26690.1	2.6e-38	39.23	emp24/gp25L/p24 family/GOLD family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009038	GOLD domain	SMART	SM01190	EMP24_GP25L_2	coord: 28..210 e-value: 3.9E-57 score: 205.8
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 30..210 e-value: 9.9E-48 score: 162.5
IPR009038	GOLD domain	PROSITE	PS50866	GOLD	coord: 38..150 score: 14.098095
IPR015720	Transmembrane emp24 domain-containing protein	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 7..215
None	No IPR available	PANTHER	PTHR22811:SF127	EMP24/GP25L/P24 FAMILY PROTEIN	coord: 7..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G003300.1	CmoCh19G003300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030134	COPII-coated ER to Golgi transport vesicle
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane