CmoCh19G002520 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTGCCTATCATGCCAAGCCCTTCCAAGGACCCAATCTGATAGGGAGGATGAAGCTCAAGAGACCTCTTCTAGCGTACGCCAATCGTGTTGCCTACACATATCACGGCGGTGGTCGACCGAGCTGACACCTCGGTCCTATGAGTCGATCAAATCCAACAACAATATTGCCTCATCTTTGCACCAGAAGGCCAAGAATCGTCGTATTCAGAGCGATTGTGGCTGGAAAGAACCGAGGTTGATTCGGTGCTCTGGGATGAGAAGGAATTGGAGCTTTGAGGAGTTGGGGTTGAGAGATCAAAAGAAAGGGAGGTTCCATTGA ATGAATTGCCTATCATGCCAAGCCCTTCCAAGGACCCAATCTGATAGGGAGGATGAAGCTCAAGAGACCTCTTCTAGCGTACGCCAATCGTGTTGCCTACACATATCACGGCGGTGGTCGACCGAGCTGACACCTCGGTCCTATGAGTCGATCAAATCCAACAACAATATTGCCTCATCTTTGCACCAGAAGGCCAAGAATCGTCGTATTCAGAGCGATTGTGGCTGGAAAGAACCGAGGTTGATTCGGTGCTCTGGGATGAGAAGGAATTGGAGCTTTGAGGAGTTGGGGTTGAGAGATCAAAAGAAAGGGAGGTTCCATTGA ATGAATTGCCTATCATGCCAAGCCCTTCCAAGGACCCAATCTGATAGGGAGGATGAAGCTCAAGAGACCTCTTCTAGCGTACGCCAATCGTGTTGCCTACACATATCACGGCGGTGGTCGACCGAGCTGACACCTCGGTCCTATGAGTCGATCAAATCCAACAACAATATTGCCTCATCTTTGCACCAGAAGGCCAAGAATCGTCGTATTCAGAGCGATTGTGGCTGGAAAGAACCGAGGTTGATTCGGTGCTCTGGGATGAGAAGGAATTGGAGCTTTGAGGAGTTGGGGTTGAGAGATCAAAAGAAAGGGAGGTTCCATTGA MNCLSCQALPRTQSDREDEAQETSSSVRQSCCLHISRRWSTELTPRSYESIKSNNNIASSLHQKAKNRRIQSDCGWKEPRLIRCSGMRRNWSFEELGLRDQKKGRFH Homology
BLAST of CmoCh19G002520 vs. ExPASy TrEMBL
Match: A0A0A0LEC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902280 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 3.5e-31 Identity = 70/111 (63.06%), Postives = 92/111 (82.88%), Query Frame = 0
BLAST of CmoCh19G002520 vs. ExPASy TrEMBL
Match: A0A5A7T546 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001040 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 5.8e-26 Identity = 71/111 (63.96%), Postives = 87/111 (78.38%), Query Frame = 0
BLAST of CmoCh19G002520 vs. ExPASy TrEMBL
Match: A0A5D3E5T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004480 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 5.8e-26 Identity = 71/111 (63.96%), Postives = 87/111 (78.38%), Query Frame = 0
BLAST of CmoCh19G002520 vs. ExPASy TrEMBL
Match: A0A1S3CRL3 (uncharacterized protein LOC103503546 OS=Cucumis melo OX=3656 GN=LOC103503546 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 5.8e-26 Identity = 71/111 (63.96%), Postives = 87/111 (78.38%), Query Frame = 0
BLAST of CmoCh19G002520 vs. ExPASy TrEMBL
Match: A0A6J1DZN2 (uncharacterized protein LOC111026067 OS=Momordica charantia OX=3673 GN=LOC111026067 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 7.8e-23 Identity = 70/125 (56.00%), Postives = 84/125 (67.20%), Query Frame = 0
BLAST of CmoCh19G002520 vs. TAIR 10
Match: AT5G46770.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 63.9 bits (154), Expect = 8.8e-11 Identity = 43/127 (33.86%), Postives = 73/127 (57.48%), Query Frame = 0
BLAST of CmoCh19G002520 vs. TAIR 10
Match: AT2G35215.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46770.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 2.7e-04 Identity = 31/96 (32.29%), Postives = 48/96 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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