CmoCh19G002240 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G002240
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	DEAD-box ATP-dependent RNA helicase 5-like
Location	Cmo_Chr19: 1500574 .. 1513299 (+)
RNA-Seq Expression	CmoCh19G002240
Synteny	CmoCh19G002240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCCATTTCATTTCTGCTTTCGATTCTTTATGGATATTTTTTCTTTACATCAGAAATCTCCGGCGATCAGGAAATTTAGAACAACAAGTGATTGGAAAGCAGCCTAAGAAGCTCAGACTATTACGATCGATAAACACAAAGCTTGAATTGAAAGCCAAATCCAGAAATCGGCCGGCGACTGAGAAACGCCTCTCGCGACGCCCTAACTTCAGGCTTTTGCGGCCTCCACCGGCGCCTTGGCCCTGCTGGCGGAAATCTGCTCGTACAGATCTCTGATCTTCAATCCGACGATGGTTTGGAAGAAGCCTGTGCCATTGTTGCTTCCAGGGAACTCCGAGTGCTTCAGCATCTGTTGAGTCACTTCGCCGTAGAATTTTGTCGACAAGTTGCTTAGATGGCTTTCCACATAGATCAGTTCGTCCAGTCTGTCGAACTGCCCGTCCATTTCCAGTACGGATACCTGAAATTCGCCATTCAGACATTTCATCAAACACTTGGTATGCCTCAATTTCGCTTTTCTAGTTTTTAATTTAATAATTTTATGTTCAATTTTGGTTAGTGATTTGAACTTTTAACAATTCAACTAAACGGCAAAATCATTCTTAATGTTCACAATGATCTTAAGATAGGGTGGGATTGGATTGTGAACCATATTCTTGGATTGGTCAGGTTAACCCGACTAAAAAAAGTTCCAACCCTAGAAACAAAATTTTCAAAGATTCAACCGAACCCAAGAGGAAAAAGAAATATAACTCAATTCAGGATTGTGTTCGGTAGTCTAAGTTGTTTGGGTCATTGGGTCATGTGAACACCTGTAGTGAATACATGTCAACTATTTGGACACTTTGACATGTAATGAAAGTGTTTAACACTAGTTGTACAAAGTCCATATTAGATATTGTCCTCTGCAACCGACGTGGGATCTCACAATCCACCCCCTTAGGAGCCCAGCGTCTTCACTGGCACACCATCTAGTGTTTGACTGATACTATTTGTAACAGCCCATGCCTACCCCTAGCAGATATTGTTCGCTTTAGCCAGTTACTTATCATTGTCAGCCTTACAGTTTTAAAACATGTCTACTAGGGAGAGGTTTTCAACCGACATGGGATCTCACAAATAATGATATACATTTTAATGAACGTGTTCTTCCTTTGTACGTGCCTAAATTTGTAAAAGAAAGACTATCACTATGTCCATGTCTTGTTGATTTATATCTCATATCTATATCCCTGATCTTATAAATTCTAAAGTTTCAAAAAAGTGTCCAAAAGTTAGTCGAACACGATCTTAAGAACTTCACGAACGGTTTTGAAAATCTTTTCCAAGATAAAAACAAGAAACAAGAAACGAAAACATCCCGAACGAGTTGTAGTGATTACCTCATGGCCATAGTAAGATTCAGGGCCATAGGAGAACTTGATGCCAGGGTAAGAACAAGTGAGCTTTCTTCCACAAGGTATCCATGAAACTGTGGAGCCTTCATCAAACAAATAAACTGGGTTAAAAAACTCAACCCCTTCCTTCATTATCAGCCTAACTCTCAGAACTTTCCCTTCATTATCATCTGGAATCAGATTTGTTGGTAGCACTTCTATCACTGCATCTGCATACTGCTTCTGTGGGTCTGCAAATTCATATAAACATCACTCCTTATTATGAATTTTGATTTAAGATATATTTGTGGCATATATTTTGTTCTATAACTGTAATTAGTTAAAGAATATATTTTATATACCTGTAATTGTAACTGCCTAAGTCACCGCTAGGAGATATTGTCTTTTTTGGGCTTTCATTTATGCGTTTTTCCCAAGGTTTTAAAATGCGTCTACTATGGAGAGAGTCTAGCCCTACTTCGACCAGTGTCTTGCACCGTCCGGTAACCTGGCTCTAATACCATTTGTAACAGCCCAATCTCACCGCTAGCAGATATTGTCCTCTTTGAACTTTCCCTCAAGGTTTTAAAACGCGTCTACTATGGAGAGAGTCTATCTCTACTCCTACCAGTGTCTCACACTGTCTGGTAACCTGGCTCTGATACCGTTTGTAACAGCCCAAGCCTACCGCTAGCAGATATTGTCCTCTTTGAACTTTCCCTTCTGGGCTTTCCCTCAAGGTTTTAAAACGCGTCTACTATGGAGAGAGTCTAGCCCTACTCCGACCAGTGTCTCACACTGTCCGATAACCTGGCTCTGGTACTATTTGTAACAACTCAAGTCCACCGCTAGCAGATATTGTCCTTTTTGGGCTTCAAGGTTTTAAAACACGTTTGCTAGTAAGAGGTTTCCACACCTTTATAAGGAAAGCTTCGTTCCCCTCTCCGACCGATGTGGGATTGTAATCGGTTAGTATTTTTTTTCCTCTTATTTTTAGGTAGTATATTTTCTCGGAATTGGTTGGTAGTATATTTTTTGGTAGCTTGTATCCTATTTAAACACTGTGAACATTAATGAAGATCGTAACTTCGATCCCACTTTTGTTTCTCATTCTTAACACTCTTTTACGTATTTATAGCCATAAACAACACTTGATACTACAAAAGTGCCTTAAAATCTCACCGATATAGGCATCAAAGTCGGGTTTTCGAGCTTCGATACTCGCTTTGATGCTCTCGAGGCTGTGTCCTCTCTCAGCCATGTCCCTCTGTAAAAGTATTTGATTCAGTTAGGTTGTGAACAAATAGAATTAAGCAAAAAGAGATACTCATTTAGAGTAGGAACCTGAATTTTCCAAGCAAATTTAACTTCATTGCTGATATCCAAGTAGATACTGAAGTCCAGCAGGTCTCTTACTCTTGAATCATACCTATTAGGGGAAAAGGGAAAGATTAGGCCTTGTTCTTAAAAGACACCAAAAGACACCAAAATACACAGAGATATAGACACTTACATGGGGTGTAAGCCTTCAATGACAAGGATTTTAGGCGGCTTAATGAGCTCAGGAGGGTCAAGAAGGCCACTGACATGATTATAAATGGGCTTATCAACAGGGACACCATTTTTAAGAGCCTTAACTTGTTCATACATGAGGTCAAAATCATTGGCTTTTGGATCAAGCGCTGTGACTCCCTTTTCTTTTCTTCCTGTTCTGTCTAATGAGTGGTAGTCATCTAAGCATATCACGGTGGTTGTGTCACTGATGAGTGTGTTTGAGTCTGGATTGCCGCCCTTTGGTGGCTCAGCTGCCCCTCCAAAAACGCTCGTTAGCCTCCTCATGAATGTGCTTTTCCCACACCCTGAGTCAGCTGCTAGACCGATCACCACGGTCTGCTGGCCACCAGCTGAGCAGGTTATGACACAGGCGGTGTTGCTCAAGCTGCTGTGTCTCTCCCTTTTGCTGCTCCCCCACCTCTTTCCACTCAAGAAAACCAGCTGCTGCGGCGGCTGGTGGCTCTTCTGGTGGAAGCCCAGGAAGGATGAGTTTAATGTACAGACAGCCATTCTTTTGTTTTCCTTTGCTTTTCAGTTGTTGAGGTAGTAAGGAAGAAGAATTTGGTGTATGATTTCTTCTTCTTCCTTATCTTCTGAAATGAGGGGTGGGTTTTGGCACTTTTCTTATATGTTTTTCAAGGCTTAATTTGGAGCACAGATTGAAATAGGAGGCTGAGAATGGAGAAGAGAGAAAGGAGATTTAAACGAGCCACGAATTATCTGTATGGAAGTGTTTCATTCTTTTTATTCCCGAGAGAAGTAAGAACTGGTTACTGACTGGCGTAGTACTTTTTTAGTGGCTACAAACTTCAAAGAGGTTTACTTATCCGCTTAATGCAACTGGAATCGACCCGTGGAGCGTATTGGAAAACGAGTAGGAGATCTATCAGAGCGGTGCGTGTGTAGGCACGTATTGTTCGTTTTTTTATAAATATTTTGTTTTTAGTTAAGAAGAAAAGGGATATTTCCATTTGCATATTGGAAGAGAAGAGAAGGGAAGGAAGGACAGTGGAATTGTTGATGAGGAAGCTGTGATGTTGGTGAAGAAAAGAGGGATGGAAGAATGACAAGGAGGAGATTTGGATATGGGGTGACACGTGGCAGAAGGAGACTGGCTGGTTCAGGATTGGGTGTGGAAGGTGAGGTGAGGAATGGAGGAGAGATGGAGAGAATACAATGGCTTTCCCCATCAAATTCAATTCATTTTCAATCTTTTGGACTTTATAGAGATAACTTCGTTTGGTTGAGTGTTAAAACTTATCATACCCAAAAAGTACTATAATATTTTACGGGTCGTAACACATCGGTCGGTTACTGTTATAATAGACGTATATTATCTCGAGCATGTAAGACCCTCTTGCAAGTCGTGATATTTGAACTCTAAATCTAACTAAAGTAATATATTCACAAGTGAGTATGATAACCACCGAACCAAAAGTACTTATTCTTGAATTAATAGGGCATGTGTCTTTATAACTCTTCGTGACTCTGTGTTGATTGTAAATCAGGGAGGATGAGGACGGGAAGTTTGAACGTACAACTCACCATTGGAGACATCGATATCAAGATTATCCTCACGGTTCAACGGGTTCTTGTGTTTTGTCCTCACTCAAATGCTTCCTTGAAAATTTTCTAGAAGTTCAACCAACGTAGTATTGCTCTAAACCAAGCACGCTTAGAGTTTCGGTTAGAAATCAGGACCCTCCACAATGGTATGATATTATCCACTTTGTGGCTTTGCGTTTGGTTTCCCCAAAAGGTCTCATACCAATAGAGATATATTCCTTATAACTCCGTGATAATTCTCTTAATCAGTCAATGTGGGACTCCCTCCCAACACTCCTCCTCTCGAACAAAGTACATCATAGCGTCTCCTTTGAGGCCTATGGAGCCCTTGAACAGTCTCCCTTTAATCGATGTTCAACTTCTTCTCTAGAGCCTTCGAACAAAGGGTGAACAAGAGTCGTTTGACACTCACCCTTTGTTTGACTCTTGAGTCGTTTGACCACACATTTGAGACTTACAACACCCTTTGTTCAACACTTTAGGATTTTATTGATATAACTAAGTTAAGGGTATGACTCTGATATCATATAGGAATCACAGGCCTCTACAATAATAGGATATTGTCCCCGAGTATAAGCTCTCATGACTTTACTTTTGATTTCCCGAAAGATCCCCACAACGTATTAGTAATTGTTTTATAGGTTTCTTAATTATTAGTAAGCTAAAAAAATCTCCAAAAATTTAAAGGAAGTGATTTTTAAGTATTTTTACTATTTATAAAAAATAATATATTTTATTTTTATTTGTCTCTAACTATTTTTTTATGTAGTTTTGAGCTTGAAGTTAGTTACCATTTGGTTCTACTTCTTATGATTTTACATTTTTACTCTTAGAATTTTTACTAATATTCAAATTAAGTCATTCGTGTCAATTTTATAGGGATTATGGTAAAAAAAATAAAAATAATAAAATAAAATAAATTCGTTCGTCAATATTAAAATTAATTAAAATTTTCACATCATAATTATTATATATTAATTAAGTAAAATTTTATCAATTTTTTCTTTTCTAATACAATATTTAATTATTTTTCGTTCAAAGATTCCGTTGCTCGATATAAAGTTACTTTTGTTGTTAAAAGTTGTCATATAATTAGAGATGTTCATATGATCGAAAGATCTAAATAAAATAAAATATAATGATAGTTATTATAATATTTTAAAAATAAACATCAGTCATAAAAATACTTTTAATTAAATCAAACTCTTTTTTTTTATTAATGTGTAAACAAATATTTTAAAAATCATATTTAAATATTTTTACAAAAATAATGATAATGATAATTAAATTATTTTTTCACTATATGGCAATAGTTTTAAAAATAGTGAATAAAATATAAGGGATAATAAGAAATCAATTAAAAAATCACTTACAAATAAATAATTTAATTTCTAAGATCACCATTTTTAATATATATATATATTTTTTAAATTATTCTTTTCGAAAAAATATTTTAGTAGACTATTCTCGTTTTTAATAAAATTTCTACTAAAAATATAAAATATCATAATAAATCAAATAAATTAAAATATCAAAATTCATTTTTCGAAGATATATATTTTTAATGCTCGTAAAATTTACCATATGGTTGCATATAAGTTATTTAATTGAGAATTATTTTTTTAAATGTAACAAAATCGTTTTACAGTAAGAATAAAATAAATTAAAAATTAAAGTATCTCTACAAAAATACCATATACTATATTATATATTATTATAAATATTCAAAAGTCAAAAAGTCAAAACCCTAAAAATCCTCAGATTTCTCCCTCAAACAATTAGCTTCTCGTTCGCTGATTCTCTTCGACTCCACCTGAGCCGAGTTCTACCAGACGCTGCCATGGTTGGGAAGCTCAGAGAGGACGCTACCGTCAGCGAACCAGTGGCCCAAGAAGCTTTCGAGAAATGCGATACAAAAGCCGAGAAGAAGAAGAAGAAGAAGAAGAACAGAGACAAAGACTCTGGTTGTCAAGAGGAAAATGAAGTTAGTCCCAAGAGGAAGTTACAGGAAGGAACTGATTCAGAGATTCACAAGAAGAAGAAAAAGCACAAGAAATCGAAGGACGAAAACGTAAGCATCAATACCTCTGACGAGAAAGAAGAGGCGAAGGTAGACGAAAATTCTACAGATGGATCCGTGGTGGTCACTGGTAAAGGTGTGAAGGAGGCAGGGTTTGTTCCGCTTAAGTCGTTTGTCGAAGCGGGACTTCCAGATGCAGTATTGGAGTGCTGTCGAACTTTCAAAAGCCCATCCCCTATTCAGTCCCACGCTTGGCCGTTCTTGTTGCATGGTCGAGACTTCATTGGAATCGCCGCAACAGGATCAGGTAATTTGTGGATTTGGCTGTCGAACATAATGTATATTGTGAAGCAGTGGATGATCTTTTAGTTATATGTGGTTTCAGGCAAGACTCTGGCGTTTGGGGTACCTGGTATAATGCATGTGTTGAACAAGAGGAAGGGCAAGATGCCGAAGGGTCGGAGTCCTCTCTGCTTAGTTCTATCACCTACGAGGGAATTAGCTCAACAGGTATGTGCTTACGAATTGGAAGTCACTTGGATTGAATATTGTGCTGCTGATAGTTTGCATCTAACCTTCTATGTCAAATTACACATTTCTGATAGCTTACGAATTGGAAGTCAATTGGATTGAAAATCACACATTTCTGTTCTATCTTCTATCTAAGAATAAATTGACTCAAGGGAAGTACAGGAAAAGGGTTTATAAAATATGGATGTCATACGGGGCTTTTAGGGTTAGGTTAGTCTCCTATTAGGTTTGAGAAGGAAAACTAGCTAATAACCTCTGAATAATGGGAAATTAGACAAGGTTTTATGACGTGAATGCTGACATGTAAACCTTGGTAGGGGTCGACTCGGATAGGAACCTCTTGGAACGCTATTCGCTTTATTATGGGGACGGGTCTGAACATTGTTAAGTTACTGCATCTCGAGATTAATTGCATTTGCAAAGTTAAATTGAATATCTAAGCCTTGTAATTATCATCGGATGTTATCAGTTTTATGAGTTGTAATAGTATTGGAATGGAGCAGCCAATGTCCATGAGAATTGAGATCACTGTAAATGTGTTCTGGCTGCAATGTTAGTATCATCTTATGTTGATCTTGTTGTTTTACCATTATTTCATTTCCTTCAATGAAAGTTCGCTTTCTTATTAAATAAATCTTGTTGTTTTACCATTTCAATTTGCGATTAATTATAGGCTTCATTTACTATGGCAGATTTCAAGTGTACTGCAAAATGCCGGAGAACCTTGTGGTGTGACGTCTACTTGTTTGTATGGTGGAGTCTCCAAAGGCAGCCAAATATCTTCTCTTAAATCTGGTGTTGTATGTTGTTTCTGCCTCCTTTTTGTGATTTGTGACTTTTTTCTTGATGTTGTAGATATCAATCAAGTTGGGAATTTCACTCGTTACTTTACTGAGTTTTTTTCTTGTTTCACATTTTGGATGATAATACGGTACCATTTACTTTATAATTTATAGGAAACACGCACACTCATGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCCCCTCCCATGTTGGTTAATATAAGTCTTTGTTTCTTTTCATTTTTTGAAATAAGTCTTTGTTTCTTTTCATTTTTTTTTCAAAAAATGAAAAGAAACTGCACACAGTCTCTACGCCCTGAAAATCACACATTTATGATCTTACACTCAGGACATTGTGATTGGAACTCCTGGACGGTTAAAGGATTTGATGGAAATGGAGGTCTGCAGACTCTCAGAAGTGTCCTTTGTGGTATGTGACTAATCTTTCGTACCATTCATATGAGAACCTGTATTTTCTTAATCTTAGCTGATAAATGGTCACTTTGAGTTAAATCTATTGATGTCTATCTCTTTTTTGGGCTTTATGTTTCTCTATTTGCCATTTTGTGCGTTTATGTAGGGTGCAAGGTGTTCATGTAGAAAAAATATGCATTACAGCATGGAATTAACATAGTTGTGTCATTAAATATTGAAGTATTGAAGCACGGGGTAGGATTGCTAATCAGCCATGATGCATCTATATGGGAATCTGTGAACTATAATATCCTATACTATAGAAGTTGAAAATATCATCTGATCCAATTCAGAGCATTCCTCAGTGGAGGTTTGGTTGAATGTTAGGATTTATGCCTCTTTGGGACTCAGAATTTTAATGAGTTTTGTTCTTAACCTCTGGTCTTGTTATTGCCCTTTTTACTTATACTCTTTCAATTTCTATCCATGAAAGCTGAAAAAACTTTTAGTAAAAAGAGCTATAAAAATTTCAAACCCTGTGTTGCATAAACCCACTCGCGTTGATTACAATTTGGGTGTGCTTTTTTAAAATAAAAAAAATTAAAAAAAAAAGAATGAAAAAATCAAGGGTGCACCTTAAGGACATTGAGCAGCTATGAACAGTGCGCATGCAATTTTTAATTAATTAATTTTTATTATTTTACAAAATGACTTTGAAAGAGAATACTGATTAGTGATAATATGTTTTGTTAGGTCCATCCTATTATCTTGCTGTTGGTTCGATGATAATTCTTTTACCCATTCTGTTATGTAAGCCTATTAATAAGACAGCTTAACTTCTTGTAGGTCCTTGATGAAGCAGATCGAATGTTGGACATGGGATTTGAACCAGAAGTGCGCTTTATATTAAGCCAGACTTGTAAAGGTTGAGATATTTGGTCTTCATTTGCACTGTCTTTGTTTTACTTTTTGCTCAATCATTCTCTCACATTTCTTAATGACTGTTATATCTTAAGTTTGCCTCTACAAGACTGAAAATTTTGTGGTGCTATGCCCTCATATTAAACTCATTCTTTTGCAGAACGCCAGATGGTTATGTTTAGCGCTACATGGCCTCTACAAGTTAATCAATTGGCTCAAGAATTCATGGATCCTGATCCAGTAAAGGTGTGCACATTTTGAAAGTACTCAATTATATCCTAATTTTTTATTCTTTAACTTTTTAAGGAGTAAGCATTTTATGACAGGTTGTTGTAGGTTCAGAGGATTTGGCTGCCAATCATGATGTCATGCAAATAGTTGAGGTATATCTGTCGTATCCAGATGAGATTTGGGCATCTAAATTAAGATAAATAGAGTTAATAATCGTTAATCATTGACATGGATAGGTTTTGGATGATCGATCACGTGATAATCGTTTAGTGGCTCTGCTTGAAAAATACCATAAATCTCAAAGGTATTTACTCCTTTTAAGAATATGAAATTATTCTAATTAATGATTTGTTATTCTATTACATTGGTTCGTGTTAGACATTTGTATTTGTTGTTTAATCTCACTGTTAGACAGTTTTTCATGGGAGGAGGGTGAGTGGCTAGGGATTGTAAAATCGTAAAAACAATAAACGAGGGAATCTTTCAACCCAATAGTAAACAAGCACTCTGAAGTGGGGAGATATTTTATTTTCAAACACCCAATTATTTGATTCCCTTTTAACGTCCTATGGTGGGATATCATTATACATGAGCATTGGAGAATAATTGTTTGGCATTAATGAGTTATTTTCTTTTCAGGAACAGAGTATTAGTTTTTGTCTTGTACAAGAATGAAGCTTCACGAGTTGAAAACATGCTTCAGAGAAGGTAATAATTATTTTACATCGTAGTATGTTGGGATCAACAATTTTGGCTCTTCTCTAGATTCAGGACATTAATTTTACTTTTTAATGGATGATCTCTCTCTTTCTGCCTGTTATTATTCTCTAGGGGATGGAAGGCTGTTTCTATACACGGTGATAAAGCACAAACTGAACGCACAAAAGCACTGTCATTATTTAAAAGCGGAAGCTCTCCATTAATGGTATGCATTTGCAAATAGTTGTTCCTTCTGCTGTTTCTTGCTATTTTGATATTGTCACAAGGCTCTTAAATTTGATCTCATCATGGTTCACTTTTTTTGAGATTTTTTTTTTGGCTCTTGGCTTTTGGTATACATTTATATGAATTAACCTTCTTGATAACTCAGCCCAATGATCCAAGATTTCAATAAGAGCCCTTGAATTAAAGAAATCAACACCTCCTTATACCTTCTTGATAAGACCATCCTAATCCTTAGCCCAATGATCCAAGATTTTATTGAAGCAAGAGCCCTTGAATTAAGGAAATCAACACCTCTTTATACATGATTCGGATCAACCAAGAGATAAGGTTAGAATTAGATTATCTCTTAAGATCAAAGATCTAGAAAAGATTTGGAACCTTGTTCTAAATTGAGTCACTCCACCATCTTAACTTAATAAAGGCTTAAAAATGACAAAAATGATACTTAAATTTCGAGATATGAAAGTCTCAATTTGAGAGCTAAATTTCACTCATAAAAAATCTGTCTTTTATCGGTATTTATAATCTCTCCACAAAAAAAAAAAAAAAAAACTTTTAACTCTTCAAATGCCCACTAAAAACGTTAGAGACCATAATTAACTCCCATTCCCAAAAAAGTTATAGCCACTTTGATAATTAACTTTCCCCTTTCCCAATTCCAAGAAATTATAAAATTAAAATAATAAAATTTTCTAATGCAATTTATAGCAACTTCATGTAAATACTCAATCGAATCAACTTGTAACACGTGAAATAATGGTTGAACCAAGCCTATCCAATTTTGTAGAGGCAGAATGAATGCTCGTTGAATCTTCTTGGCCTTGGAGATCGTGTAATAGGTCTATTTTGATATCTTGCAACACATTATGCTCAGCCGCAAAAAAAAAAAAGATTGAAAATGTAAAAGCCAAATGGTTAAGTACCCGTTGTTTGTAATTTATAGTGTGACAGTAGAAGTATATTTTTCATGCTACACTGCTTTCTGTTGTAGGAATATTCAATGCCTCTACAAATATAAATTTCATTTTTATTTTAATAGTTATTTATGGGTTGCTAAAATGTATATTTTCTTGTAATTATAGATAGCTACTGATGTAGCCGCTCGAGGTTTGGATATTCCGGATGTAGAAGTAGTAATAAACTATAGCTTTCCTCTCACAACGGAAGATTATGTCCATAGAATTGGGAGGACTGGACGGGCTGGTAAAAAGGGTGTTGCTCACACATTCTTCATGCAACAAAACAAGGTTATCTTGGCTATATATATATATATATATTACGCCCCTTTTTAAATCGAATAAAATAATTTGATCTATTGAATTCCTTTAACCTTTTTTGCCATTCTTTTAGGGACTTGCTGGGGAGCTGGTAAATGTTCTCCGTGAAGCTAAGCAAGTTGTACCTGATGCACTTCTGAAATTCGGTACTCATGTGAAGAAAAAGGTACATTATTCTTGTCTGTGAACTCAAATCAAGTATCCTGTTCATGGTTTTTGTTGTGTTAAACTAATTTTTTTTTTTTATGTACTTTGGATAGTCTAAATTGAGTCCTCTTTAACTTCGATATTTTTTATAATTCAGTTGAAAAGTAAATAGTTTTATTGAACATAAATTTTGATATTGTATACCTCTTAATTTCTAACGGACTTATTATACATAAAATTTTAAGTTAGAAAGATTTATTAGATACTTTTGACACGAAATTTGTAATTTAACCCTTCTTTTTTCGTTAATATGGGGTTGATTGTTGGAGTAGGTAGATCTTTTTTGTAAGATTTGTATGTTAAAATGTGTCACTTTCTGCTCATGGTTGCATTTTTCAAATGATTTTGATATCGGCAACTGTTCGCTTTAGTGATTTTCTAAACATGTGGAGCGGCATGTTCTCTCATATGTATGTATGTATATCTATATATCTATATGTATCTATGTATCCATATATATATATATACATGCATACATACATACATATATATATAGTAACGATAAGCTTGTACAGAACATTAATTAATGGAGATGTTAATGCTTCACTGCAGGAATCCAAGCTCTATGGAGCGCACTTCAAGGAAATTACGGCAGATGCCCCCAAGTCCACTAAGATTACATTCGATGATTCCGACGATGAAGACTGATTAGCAAAATAGCTTTTGTTTTTGTTTGTTTTTTTTCTTAAATTTATAATTGAAAAGTATGCATTTTCTATTTAATTACAAAAATTTTGATATTGTGAGCTTCATTAATGTATTGAGTAATGAGGTTCGGAAGAAAATAGTGATGAATGATTAATGCAATTCTATGCCATTTCAGTTTTGGGGAATATGTTGATCAACTAAAATGCAATAA

mRNA sequence

ATTTCCATTTCATTTCTGCTTTCGATTCTTTATGGATATTTTTTCTTTACATCAGAAATCTCCGGCGATCAGGAAATTTAGAACAACAAGTGATTGGAAAGCAGCCTAAGAAGCTCAGACTATTACGATCGATAAACACAAAGCTTGAATTGAAAGCCAAATCCAGAAATCGGCCGGCGACTGAGAAACGCCTCTCGCGACGCCCTAACTTCAGGCTTTTGCGGCCTCCACCGGCGCCTTGGCCCTGCTGGCGGAAATCTGCTCGTACAGATCTCTGATCTTCAATCCGACGATGGTTTGGAAGAAGCCTGTGCCATTGTTGCTTCCAGGGAACTCCGAGTGCTTCAGCATCTGTTGAGTCACTTCGCCGTAGAATTTTGTCGACAAGTTGCTTAGATGGCTTTCCACATAGATCAGTTCGTCCAGTCTGTCGAACTGCCCGTCCATTTCCAGTACGGATACCTGAAATTCGCCATTCAGACATTTCATCAAACACTTGGTATGCCTCAATTTCGCTTTTCTAGTTTTTAATTTAATAATTTTATGTTCAATTTTGGTTAGTGATTTGAACTTTTAACAATTCAACTAAACGGCAAAATCATTCTTAATGTTCACAATGATCTTAAGATAGGGTGGGATTGGATTGTGAACCATATTCTTGGATTGGTCAGGTTAACCCGACTAAAAAAAGTTCCAACCCTAGAAACAAAATTTTCAAAGATTCAACCGAACCCAAGAGGAAAAAGAAATATAACTCAATTCAGGATTGTGTTCGGTAGTCTAAGTTGTTTGGGTCATTGGGTCATGTGAACACCTGTAGTGAATACATGTCAACTATTTGGACACTTTGACATGTAATGAAAGTGTTTAACACTAGTTGTACAAAGTCCATATTAGATATTGTCCTCTGCAACCGACGTGGGATCTCACAATCCACCCCCTTAGGAGCCCAGCGTCTTCACTGGCACACCATCTAGTGTTTGACTGATACTATTTGTAACAGCCCATGCCTACCCCTAGCAGATATTGTTCGCTTTAGCCAGTTACTTATCATTGTCAGCCTTACAGTTTTAAAACATGTCTACTAGGGAGAGGTTTTCAACCGACATGGGATCTCACAAATAATGATATACATTTTAATGAACGTGTTCTTCCTTTGTACGTGCCTAAATTTGTAAAAGAAAGACTATCACTATGTCCATGTCTTGTTGATTTATATCTCATATCTATATCCCTGATCTTATAAATTCTAAAGTTTCAAAAAAGTGTCCAAAAGTTAGTCGAACACGATCTTAAGAACTTCACGAACGGTTTTGAAAATCTTTTCCAAGATAAAAACAAGAAACAAGAAACGAAAACATCCCGAACGAGTTGTAGTGATTACCTCATGGCCATAGTAAGATTCAGGGCCATAGGAGAACTTGATGCCAGGGTAAGAACAAGTGAGCTTTCTTCCACAAGGTATCCATGAAACTGTGGAGCCTTCATCAAACAAATAAACTGGGTTAAAAAACTCAACCCCTTCCTTCATTATCAGCCTAACTCTCAGAACTTTCCCTTCATTATCATCTGGAATCAGATTTGTTGGTAGCACTTCTATCACTGCATCTGCATACTGCTTCTGTGGGTCTGCAAATTCATATAAACATCACTCCTTATTATGAATTTTGATTTAAGATATATTTGTGGCATATATTTTGTTCTATAACTGTAATTAGTTAAAGAATATATTTTATATACCTGTAATTGTAACTGCCTAAGTCACCGCTAGGAGATATTGTCTTTTTTGGGCTTTCATTTATGCGTTTTTCCCAAGGTTTTAAAATGCGTCTACTATGGAGAGAGTCTAGCCCTACTTCGACCAGTGTCTTGCACCGTCCGGTAACCTGGCTCTAATACCATTTGTAACAGCCCAATCTCACCGCTAGCAGATATTGTCCTCTTTGAACTTTCCCTCAAGGTTTTAAAACGCGTCTACTATGGAGAGAGTCTATCTCTACTCCTACCAGTGTCTCACACTGTCTGGTAACCTGGCTCTGATACCGTTTGTAACAGCCCAAGCCTACCGCTAGCAGATATTGTCCTCTTTGAACTTTCCCTTCTGGGCTTTCCCTCAAGGTTTTAAAACGCGTCTACTATGGAGAGAGTCTAGCCCTACTCCGACCAGTGTCTCACACTGTCCGATAACCTGGCTCTGGTACTATTTGTAACAACTCAAGTCCACCGCTAGCAGATATTGTCCTTTTTGGGCTTCAAGGTTTTAAAACACGTTTGCTAGTAAGAGGTTTCCACACCTTTATAAGGAAAGCTTCGTTCCCCTCTCCGACCGATGTGGGATTGTAATCGATTTCTCCCTCAAACAATTAGCTTCTCGTTCGCTGATTCTCTTCGACTCCACCTGAGCCGAGTTCTACCAGACGCTGCCATGGTTGGGAAGCTCAGAGAGGACGCTACCGTCAGCGAACCAGTGGCCCAAGAAGCTTTCGAGAAATGCGATACAAAAGCCGAGAAGAAGAAGAAGAAGAAGAAGAACAGAGACAAAGACTCTGGTTGTCAAGAGGAAAATGAAGTTAGTCCCAAGAGGAAGTTACAGGAAGGAACTGATTCAGAGATTCACAAGAAGAAGAAAAAGCACAAGAAATCGAAGGACGAAAACGTAAGCATCAATACCTCTGACGAGAAAGAAGAGGCGAAGGTAGACGAAAATTCTACAGATGGATCCGTGGTGGTCACTGGTAAAGGTGTGAAGGAGGCAGGGTTTGTTCCGCTTAAGTCGTTTGTCGAAGCGGGACTTCCAGATGCAGTATTGGAGTGCTGTCGAACTTTCAAAAGCCCATCCCCTATTCAGTCCCACGCTTGGCCGTTCTTGTTGCATGGTCGAGACTTCATTGGAATCGCCGCAACAGGATCAGGCAAGACTCTGGCGTTTGGGGTACCTGGTATAATGCATGTGTTGAACAAGAGGAAGGGCAAGATGCCGAAGGGTCGGAGTCCTCTCTGCTTAGTTCTATCACCTACGAGGGAATTAGCTCAACAGATTTCAAGTGTACTGCAAAATGCCGGAGAACCTTGTGGTGTGACGTCTACTTGTTTGTATGGTGGAGTCTCCAAAGGCAGCCAAATATCTTCTCTTAAATCTGGTGTTGACATTGTGATTGGAACTCCTGGACGGTTAAAGGATTTGATGGAAATGGAGGTCTGCAGACTCTCAGAAGTGTCCTTTGTGGTCCTTGATGAAGCAGATCGAATGTTGGACATGGGATTTGAACCAGAAGTGCGCTTTATATTAAGCCAGACTTGTAAAGAACGCCAGATGGTTATGTTTAGCGCTACATGGCCTCTACAAGTTAATCAATTGGCTCAAGAATTCATGGATCCTGATCCAGTAAAGGTTGTTGTAGGTTCAGAGGATTTGGCTGCCAATCATGATGTCATGCAAATAGTTGAGGTTTTGGATGATCGATCACGTGATAATCGTTTAGTGGCTCTGCTTGAAAAATACCATAAATCTCAAAGGAACAGAGTATTAGTTTTTGTCTTGTACAAGAATGAAGCTTCACGAGTTGAAAACATGCTTCAGAGAAGGGGATGGAAGGCTGTTTCTATACACGGTGATAAAGCACAAACTGAACGCACAAAAGCACTGTCATTATTTAAAAGCGGAAGCTCTCCATTAATGATAGCTACTGATGTAGCCGCTCGAGGTTTGGATATTCCGGATGTAGAAGTAGTAATAAACTATAGCTTTCCTCTCACAACGGAAGATTATGTCCATAGAATTGGGAGGACTGGACGGGCTGGTAAAAAGGGTGTTGCTCACACATTCTTCATGCAACAAAACAAGGGACTTGCTGGGGAGCTGGTAAATGTTCTCCGTGAAGCTAAGCAAGTTGTACCTGATGCACTTCTGAAATTCGGTACTCATGTGAAGAAAAAGGAATCCAAGCTCTATGGAGCGCACTTCAAGGAAATTACGGCAGATGCCCCCAAGTCCACTAAGATTACATTCGATGATTCCGACGATGAAGACTGATTAGCAAAATAGCTTTTGTTTTTGTTTGTTTTTTTTCTTAAATTTATAATTGAAAAGTATGCATTTTCTATTTAATTACAAAAATTTTGATATTGTGAGCTTCATTAATGTATTGAGTAATGAGGTTCGGAAGAAAATAGTGATGAATGATTAATGCAATTCTATGCCATTTCAGTTTTGGGGAATATGTTGATCAACTAAAATGCAATAA

Coding sequence (CDS)

ATGTGGGATTGTAATCGATTTCTCCCTCAAACAATTAGCTTCTCGTTCGCTGATTCTCTTCGACTCCACCTGAGCCGAGTTCTACCAGACGCTGCCATGGTTGGGAAGCTCAGAGAGGACGCTACCGTCAGCGAACCAGTGGCCCAAGAAGCTTTCGAGAAATGCGATACAAAAGCCGAGAAGAAGAAGAAGAAGAAGAAGAACAGAGACAAAGACTCTGGTTGTCAAGAGGAAAATGAAGTTAGTCCCAAGAGGAAGTTACAGGAAGGAACTGATTCAGAGATTCACAAGAAGAAGAAAAAGCACAAGAAATCGAAGGACGAAAACGTAAGCATCAATACCTCTGACGAGAAAGAAGAGGCGAAGGTAGACGAAAATTCTACAGATGGATCCGTGGTGGTCACTGGTAAAGGTGTGAAGGAGGCAGGGTTTGTTCCGCTTAAGTCGTTTGTCGAAGCGGGACTTCCAGATGCAGTATTGGAGTGCTGTCGAACTTTCAAAAGCCCATCCCCTATTCAGTCCCACGCTTGGCCGTTCTTGTTGCATGGTCGAGACTTCATTGGAATCGCCGCAACAGGATCAGGCAAGACTCTGGCGTTTGGGGTACCTGGTATAATGCATGTGTTGAACAAGAGGAAGGGCAAGATGCCGAAGGGTCGGAGTCCTCTCTGCTTAGTTCTATCACCTACGAGGGAATTAGCTCAACAGATTTCAAGTGTACTGCAAAATGCCGGAGAACCTTGTGGTGTGACGTCTACTTGTTTGTATGGTGGAGTCTCCAAAGGCAGCCAAATATCTTCTCTTAAATCTGGTGTTGACATTGTGATTGGAACTCCTGGACGGTTAAAGGATTTGATGGAAATGGAGGTCTGCAGACTCTCAGAAGTGTCCTTTGTGGTCCTTGATGAAGCAGATCGAATGTTGGACATGGGATTTGAACCAGAAGTGCGCTTTATATTAAGCCAGACTTGTAAAGAACGCCAGATGGTTATGTTTAGCGCTACATGGCCTCTACAAGTTAATCAATTGGCTCAAGAATTCATGGATCCTGATCCAGTAAAGGTTGTTGTAGGTTCAGAGGATTTGGCTGCCAATCATGATGTCATGCAAATAGTTGAGGTTTTGGATGATCGATCACGTGATAATCGTTTAGTGGCTCTGCTTGAAAAATACCATAAATCTCAAAGGAACAGAGTATTAGTTTTTGTCTTGTACAAGAATGAAGCTTCACGAGTTGAAAACATGCTTCAGAGAAGGGGATGGAAGGCTGTTTCTATACACGGTGATAAAGCACAAACTGAACGCACAAAAGCACTGTCATTATTTAAAAGCGGAAGCTCTCCATTAATGATAGCTACTGATGTAGCCGCTCGAGGTTTGGATATTCCGGATGTAGAAGTAGTAATAAACTATAGCTTTCCTCTCACAACGGAAGATTATGTCCATAGAATTGGGAGGACTGGACGGGCTGGTAAAAAGGGTGTTGCTCACACATTCTTCATGCAACAAAACAAGGGACTTGCTGGGGAGCTGGTAAATGTTCTCCGTGAAGCTAAGCAAGTTGTACCTGATGCACTTCTGAAATTCGGTACTCATGTGAAGAAAAAGGAATCCAAGCTCTATGGAGCGCACTTCAAGGAAATTACGGCAGATGCCCCCAAGTCCACTAAGATTACATTCGATGATTCCGACGATGAAGACTGA

Protein sequence

MWDCNRFLPQTISFSFADSLRLHLSRVLPDAAMVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTDSEIHKKKKKHKKSKDENVSINTSDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYHKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFDDSDDED

Homology

[Close]

BLAST of CmoCh19G002240 vs. ExPASy Swiss-Prot
Match: Q9C551 (DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana OX=3702 GN=RH5 PE=1 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 1.3e-195
Identity = 368/539 (68.27%), Postives = 434/539 (80.52%), Query Frame = 0


Query: 33  MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 92
           M G+ +E     EP+A E+      K +KK KK K+ +++   +E  +       +E ++
Sbjct: 1   MAGQKQELPVSGEPLAVES--PMTNKKKKKSKKNKHTEENHEVEEVPQEVTNGVEEELSN 60

Query: 93  SEIHKKKKKHKKSKDENVSINTSDEKEEAK--VDENSTDGSVVVTGKGVKEAGFVPLKSF 152
            E  KK+K+ +K  ++N   +  ++K EA+   +  S    VVVTGKGV+EA +  LK+F
Sbjct: 61  KEKKKKRKREEKESEKNKKKDVPEKKLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTF 120

Query: 153 VEAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVL- 212
            E+ LP+ VL+CC+TF+ PSPIQSH WPFLL GRD IGIA TGSGKTLAFG+P IMHVL 
Sbjct: 121 AESNLPENVLDCCKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLK 180

Query: 213 -NKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSL 272
            NK+ G   K  +P CLVLSPTRELA QIS VL+ AGEPCG+ S C+YGG SKG QIS++
Sbjct: 181 KNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAI 240

Query: 273 KSGVDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQ 332
           +SGVDIVIGTPGRL+DL+E  V RLS+VSFVVLDEADRMLDMGFE  VRFILS T K RQ
Sbjct: 241 RSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQ 300

Query: 333 MVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALL 392
           MVMFSATWPL V++LAQEFMDP+P+KV++GS DLAANHDVMQI+EVLD+R+RD RL+ALL
Sbjct: 301 MVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALL 360

Query: 393 EKYHKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSP 452
           EKYHKSQ+NRVLVF LYK EA R+E  LQ+RGWKAVSIHG+KAQ+ERT++LSLFK GS P
Sbjct: 361 EKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCP 420

Query: 453 LMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLA 512
           L++ATDVAARGLDIPDVEVVINY+FPLTTEDYVHRIGRTGRAGKKGVAHTFF   NKGLA
Sbjct: 421 LLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLA 480

Query: 513 GELVNVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFDDSDDED 568
           GELVNVLREA QVVP  LLKFGTHVKKKESKLYGAHFKEI ADAPK+TKITFD+SDDED
Sbjct: 481 GELVNVLREAGQVVPADLLKFGTHVKKKESKLYGAHFKEIAADAPKATKITFDNSDDED 537

[Close]

BLAST of CmoCh19G002240 vs. ExPASy Swiss-Prot
Match: Q6YS30 (DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0301200 PE=2 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 1.6e-193
Identity = 363/511 (71.04%), Postives = 407/511 (79.65%), Query Frame = 0


Query: 56  DTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTDSEIHKKKKKHKKSKDENVSINTS 115
           D   + KK+KK  +DK    + E EV         +  E  K  KK +   D        
Sbjct: 12  DVSRKSKKEKKSKKDKKRKLEAEAEVVVVEAAAATSTDEATKSSKKKRAKGD-------L 71

Query: 116 DEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLECCRTFKSPSPIQSH 175
            + EEA   EN     V VTGKG  +A + PL SF    LP  VL+CC+ F+ PSPIQ++
Sbjct: 72  GQGEEA---ENGGGKVVAVTGKGSADAKYAPLSSFAATALPPQVLDCCKGFERPSPIQAY 131

Query: 176 AWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQ 235
           AWP+LL GRDFIGIAATGSGKT+AFGVP +MHV  K   K  K   P  LVLSPTRELAQ
Sbjct: 132 AWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQ 191

Query: 236 QISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLKDLMEMEVCRLSE 295
           QI+ VL  AG PCG++S CLYGG SKG QIS+LKSGVDIVIGTPGR+KDL+EM +CRL++
Sbjct: 192 QIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLND 251

Query: 296 VSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMFSATWPLQVNQLAQEFMDPDPVKV 355
           VSFVVLDEADRMLDMGFEPEVR ILSQT   RQ VMFSATWP  V+QLAQEFMDP+P+KV
Sbjct: 252 VSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVHQLAQEFMDPNPIKV 311

Query: 356 VVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYHKSQRNRVLVFVLYKNEASRVENM 415
           V+GSEDLAANHDVMQIVEVLDDRSRD+RLVALL+KYHK+QRNRVLVFVLYK EA+RVE M
Sbjct: 312 VIGSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQRNRVLVFVLYKREATRVETM 371

Query: 416 LQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGLDIPDVEVVINYSFPL 475
           LQRRGW AVS+HGDKAQ +RTKALSLFK GS PLMIATDVA+RGLDIPDVEVVINYS+PL
Sbjct: 372 LQRRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIPDVEVVINYSYPL 431

Query: 476 TTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVVPDALLKFGTHVKK 535
           TTEDYVHRIGRTGRAGKKGVAHTFF Q+NKGLAGELVNVLREA QVVP AL KFGTHVKK
Sbjct: 432 TTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREAGQVVPPALTKFGTHVKK 491

Query: 536 KESKLYGAHFKEITADAPKSTKITFDDSDDE 567
           KES++YG+HFKEI ADAPKSTKITF DSD++
Sbjct: 492 KESQIYGSHFKEIKADAPKSTKITFGDSDED 512

[Close]

BLAST of CmoCh19G002240 vs. ExPASy Swiss-Prot
Match: A5E1W4 (ATP-dependent RNA helicase DBP3 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP3 PE=3 SV=2)

HSP 1 Score: 394.8 bits (1013), Expect = 1.6e-108
Identity = 233/515 (45.24%), Postives = 333/515 (64.66%), Query Frame = 0


Query: 49  QEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTDSEIHKKKKKHKKSKDE 108
           QE  EK D K +K KK+KK++ +    +E+N+ S + + ++ + S +        +S   
Sbjct: 30  QEKKEKKDKKEKKDKKEKKDKKEKKDKKEKNKESKEAEARDDSGSNVQASSSSSTESTSY 89

Query: 109 N-VSINTSDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLECCRTFK 168
             V  +   +  +++VD+  TD  V V  +  +   + P+ SF +  L   V      F 
Sbjct: 90  GYVQSSKVKDVPQSEVDKFLTDNEVTV--EDPQHLHYRPILSFDQIKLQKDVSSKLTKFP 149

Query: 169 SPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVL 228
            P+PIQS +WPFLL G+D +G+A TGSGKT AFGVP I +++  +     K  S LC  +
Sbjct: 150 KPTPIQSVSWPFLLDGKDVVGVAETGSGKTFAFGVPAINNIITSKN----KDLSVLC--I 209

Query: 229 SPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLKDLME 288
           SPTRELA QI   L++      V+   +YGGVSK  QI  +++G ++V+ TPGRL DL+ 
Sbjct: 210 SPTRELALQIYDNLEDLTRGTDVSCVAIYGGVSKDDQIKKIRNGANVVVATPGRLVDLIN 269

Query: 289 MEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQT-CKERQMVMFSATWPLQVNQLAQE 348
                LS ++++VLDEADRML+ GFE +++ I+  T  + RQ +MF+ATWP +V +LA  
Sbjct: 270 DGAVDLSSINYLVLDEADRMLEKGFEEDIKLIIGSTPAQGRQTLMFTATWPKEVRELANN 329

Query: 349 FMDPDPVKVVVGSED-LAANHDVMQIVEVLDDR-SRDNRLVALLEKYHKSQR--NRVLVF 408
           FM+  PVKV +G  D L+AN  + QIVEVLDD+  ++ +L+ LL+KY  +    N++LVF
Sbjct: 330 FMN-QPVKVTIGDRDELSANKRITQIVEVLDDKFQKEKKLINLLQKYQNTGNGDNKILVF 389

Query: 409 VLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGLDI 468
            LYK EASR+E++L R  +K  +IHGD +Q +RT+AL  FKSG   L++ATDVAARGLDI
Sbjct: 390 ALYKKEASRIESLLHRNKFKVAAIHGDLSQQQRTQALQSFKSGECNLLLATDVAARGLDI 449

Query: 469 PDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVV 528
           P+V+ VIN +FPLT EDYVHR+GRTGRAG+ G+AHTFF +  K L+G L N+LR A Q V
Sbjct: 450 PNVKYVINLTFPLTIEDYVHRLGRTGRAGQTGIAHTFFTEDEKHLSGALCNILRGANQPV 509

Query: 529 PDALLKFGTHVKKKESKLYGAHFKEITADAPKSTK 558
           P+ALLK+G H KKK   +YGA +K++  D P  +K
Sbjct: 510 PEALLKYGGHTKKKTHSVYGAFYKDV--DMPIDSK 533

[Close]

BLAST of CmoCh19G002240 vs. ExPASy Swiss-Prot
Match: A5DAC8 (ATP-dependent RNA helicase DBP3 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP3 PE=3 SV=2)

HSP 1 Score: 394.4 bits (1012), Expect = 2.1e-108
Identity = 238/517 (46.03%), Postives = 324/517 (62.67%), Query Frame = 0


Query: 53  EKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTDSEIHKKKKKHKKSKDENVSI 112
           EK + K +K+KK+KK + +    +E+ E   K + +E  + +  K+K +  +  D  VS 
Sbjct: 27  EKKEKKEKKEKKEKKEKKEKKEKKEKKEKKEKNEKKEKKEKKAKKEKTEETEETDSTVST 86

Query: 113 NTSDEK-----------EEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLE 172
            +S               ++++DE      V V  +   + GF P+ SF    L   +  
Sbjct: 87  VSSSSSGYTQAAELTALPQSEIDEFLQTNEVTV--EDPHKLGFRPILSFDHVQLQSKIAP 146

Query: 173 CCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRS 232
               F  P+PIQS +WP+LL+G D +G+A TGSGKT AFGVP I +++   K    KG  
Sbjct: 147 IVTKFPKPTPIQSASWPYLLNGDDVVGVAETGSGKTFAFGVPAINNIITDNK----KGLR 206

Query: 233 PLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGR 292
            LC  +SPTRELA QI   L    + CG+T   +YGGV K  QI ++K+   +V+ TPGR
Sbjct: 207 VLC--ISPTRELALQIYDNLTMLTKNCGLTCVAIYGGVPKDQQIKAVKT-ASVVVATPGR 266

Query: 293 LKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMFSATWPLQVN 352
           L DL+      LS + ++VLDEADRML+ GFE +++ I+  T K+RQ +MF+ATWP +V 
Sbjct: 267 LVDLLNDGAVDLSTIDYLVLDEADRMLEKGFEEDIKNIIGCTNKQRQTLMFTATWPKEVR 326

Query: 353 QLAQEFMDPDPVKVVVGSED-LAANHDVMQIVEVLDDRSRDNRLVALLEKYHKSQRNRVL 412
           +LA  FM+   VKV +G+ D LAAN  + Q VEV+D R ++ RL+ LL +Y   Q  ++L
Sbjct: 327 ELAATFMN-KAVKVSIGNRDELAANKRITQTVEVMDPRDKERRLLQLLRQYGSDQ--KIL 386

Query: 413 VFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGL 472
           VF LYK EA+RVE ML+R G+   +IHGD +Q +RT AL  FK G S L++ATDVAARGL
Sbjct: 387 VFALYKKEATRVEAMLRRSGFNVAAIHGDLSQQQRTSALDSFKRGDSNLLLATDVAARGL 446

Query: 473 DIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQ 532
           DIP+V+VVIN +FPLT EDYVHRIGRTGRAG+ G+AHT F +  K L+G L+NVLR A Q
Sbjct: 447 DIPNVKVVINLTFPLTVEDYVHRIGRTGRAGQTGIAHTLFTEHEKHLSGALMNVLRGAGQ 506

Query: 533 VVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTK 558
            VPD LLKFG H KKK    YGA FK++  D  K+ K
Sbjct: 507 PVPDELLKFGGHTKKKSHSAYGAFFKDV--DMTKTAK 529

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BLAST of CmoCh19G002240 vs. ExPASy Swiss-Prot
Match: Q6CT46 (ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP3 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 2.8e-108
Identity = 240/510 (47.06%), Postives = 323/510 (63.33%), Query Frame = 0


Query: 56  DTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTDSEIHKKKKKHKKSKDENVSINTS 115
           + K++KK KK K   KD   +++ +   ++K          KK+KK KKS+ E+ + + S
Sbjct: 17  ELKSKKKLKKDKKDKKDKKDKKDKKDKKEKK---------EKKEKKDKKSETESFAASAS 76

Query: 116 DEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLECCRTFKSPSPIQSH 175
               +  + EN       VT      +  VP   F +    D + +    F  P+PIQ+ 
Sbjct: 77  QSDIDEFLKENE------VTVSDPSGSNIVPYLDFSQVSFIDQIQKEISKFPKPTPIQAV 136

Query: 176 AWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQ 235
           +WP+LL G+D IGIA TGSGKT AFGVP I +++        K  S   LV+SPTRELA 
Sbjct: 137 SWPYLLAGKDVIGIAETGSGKTFAFGVPAINNIVTSG----DKSSSVKVLVISPTRELAS 196

Query: 236 QISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLKDLMEMEVCRLSE 295
           QI   L    + CG+ S C+YGGV K  Q   L+    +V+ TPGRL DL+E     LS 
Sbjct: 197 QIYDNLIVLTDACGLRSCCVYGGVPKDQQREDLRRS-QVVVATPGRLLDLIEEGSVDLSH 256

Query: 296 VSFVVLDEADRMLDMGFEPEVRFILSQT-CKERQMVMFSATWPLQVNQLAQEFMDPDPVK 355
           V+++VLDEADRML+ GFE +++ I+ QT    RQ +MF+ATWP +V +LA  FM  +PVK
Sbjct: 257 VNYLVLDEADRMLEKGFEEDIKKIIRQTRSTSRQTLMFTATWPKEVRELASSFMS-EPVK 316

Query: 356 VVVGSED-LAANHDVMQIVEVLDDRSRDNRLVALLEKYHK--SQRNRVLVFVLYKNEASR 415
           V +G+ D L+AN  + QIVEV+D   ++ +L+ LL+KYH   ++ ++VL+F LYK EASR
Sbjct: 317 VSIGNRDELSANKRITQIVEVVDPFRKEKKLLELLKKYHSGPTKNDKVLIFALYKKEASR 376

Query: 416 VENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGLDIPDVEVVINY 475
           VE  L+  G+   +IHGD +Q +RT+AL+ FK+G   L++ATDVAARGLDIP+V+ VIN 
Sbjct: 377 VERNLKYNGYDVAAIHGDLSQQQRTQALNEFKAGKCNLLLATDVAARGLDIPNVKTVINL 436

Query: 476 SFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVVPDALLKFGT 535
           +FPLT EDYVHRIGRTGRAG+ G AHT F +Q K LAG LVNVL  A Q VP+ L KFGT
Sbjct: 437 TFPLTVEDYVHRIGRTGRAGQYGTAHTLFTEQEKHLAGALVNVLNGAGQPVPEELKKFGT 496

Query: 536 HVKKKESKLYGAHFKEITADAPKSTKITFD 562
           H KKKE   YGA FK++   + K  KITFD
Sbjct: 497 HTKKKEHSAYGAFFKDVDL-SKKPKKITFD 504

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BLAST of CmoCh19G002240 vs. ExPASy TrEMBL
Match: A0A6J1HLR1 (DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita moschata OX=3662 GN=LOC111464108 PE=3 SV=1)

HSP 1 Score: 1030.0 bits (2662), Expect = 3.7e-297
Identity = 535/535 (100.00%), Postives = 535/535 (100.00%), Query Frame = 0


Query: 33  MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 92
           MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD
Sbjct: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60

Query: 93  SEIHKKKKKHKKSKDENVSINTSDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVE 152
           SEIHKKKKKHKKSKDENVSINTSDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVE
Sbjct: 61  SEIHKKKKKHKKSKDENVSINTSDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVE 120

Query: 153 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 212
           AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR
Sbjct: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180

Query: 213 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 272
           KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV
Sbjct: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240

Query: 273 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 332
           DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF
Sbjct: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300

Query: 333 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 392
           SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH
Sbjct: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360

Query: 393 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 452
           KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA
Sbjct: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420

Query: 453 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 512
           TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV
Sbjct: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480

Query: 513 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFDDSDDED 568
           NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFDDSDDED
Sbjct: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFDDSDDED 535

[Close]

BLAST of CmoCh19G002240 vs. ExPASy TrEMBL
Match: A0A6J1HUH8 (DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita maxima OX=3661 GN=LOC111466827 PE=3 SV=1)

HSP 1 Score: 1004.6 bits (2596), Expect = 1.7e-289
Identity = 525/536 (97.95%), Postives = 530/536 (98.88%), Query Frame = 0


Query: 33  MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKK-KKNRDKDSGCQEENEVSPKRKLQEGT 92
           MVGKLREDATVSEPVAQ AFEKCDT+AEKKKKK KKNRDKDSGCQEENEVSPKRK+QEGT
Sbjct: 1   MVGKLREDATVSEPVAQ-AFEKCDTRAEKKKKKRKKNRDKDSGCQEENEVSPKRKVQEGT 60

Query: 93  DSEIHKKKKKHKKSKDENVSINTSDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFV 152
           DSE HKKKKKHKKSKDENVSIN SDEK+E KVDENSTDGSVVVTGKGVKEAGFVPLKSFV
Sbjct: 61  DSEHHKKKKKHKKSKDENVSINASDEKQEPKVDENSTDGSVVVTGKGVKEAGFVPLKSFV 120

Query: 153 EAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNK 212
           EAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNK
Sbjct: 121 EAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNK 180

Query: 213 RKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSG 272
           RKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQIS LKSG
Sbjct: 181 RKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSG 240

Query: 273 VDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVM 332
           VDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVM
Sbjct: 241 VDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVM 300

Query: 333 FSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKY 392
           FSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKY
Sbjct: 301 FSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKY 360

Query: 393 HKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMI 452
           HKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMI
Sbjct: 361 HKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMI 420

Query: 453 ATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGEL 512
           ATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGEL
Sbjct: 421 ATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGEL 480

Query: 513 VNVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFDDSDDED 568
           VNVLREAKQVVPDAL+KFGTHVKKKESKLYGAHFKEITADAPKSTKITF+DSDDED
Sbjct: 481 VNVLREAKQVVPDALIKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDDED 535

[Close]

BLAST of CmoCh19G002240 vs. ExPASy TrEMBL
Match: A0A6J1K5T0 (LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita maxima OX=3661 GN=LOC111491423 PE=3 SV=1)

HSP 1 Score: 946.4 bits (2445), Expect = 5.4e-272
Identity = 494/540 (91.48%), Postives = 513/540 (95.00%), Query Frame = 0


Query: 28  LPDAAMVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKL 87
           LPD A VGKL+E +TVSEPVAQE F K DTK EKKKKKKK RD++SGCQE++EVS ++ +
Sbjct: 4   LPDTATVGKLKEGSTVSEPVAQEVFVKPDTKTEKKKKKKK-RDRESGCQEKDEVSHEKNV 63

Query: 88  QEGTDSEIHKKKKKHKKSKDENVSINTSDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPL 147
            EGTDSE+HKKKKKHKKSKDEN+SI TSDEKE  KV+ENSTDGSVVVTGKGVKE  F PL
Sbjct: 64  LEGTDSELHKKKKKHKKSKDENISITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPL 123

Query: 148 KSFVEAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMH 207
           KSF EAGLPD VLECCRTFK+PSPIQSHAWPFLLHG+DFIGIAA GSGKTLAFGVPGIMH
Sbjct: 124 KSFAEAGLPDEVLECCRTFKTPSPIQSHAWPFLLHGQDFIGIAAAGSGKTLAFGVPGIMH 183

Query: 208 VLNKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISS 267
           VLNKRKGKMPKGRSP CLVLSPTRELAQQISSVLQNA EPCGVTSTCLYGGVSKGSQIS 
Sbjct: 184 VLNKRKGKMPKGRSPFCLVLSPTRELAQQISSVLQNAXEPCGVTSTCLYGGVSKGSQISC 243

Query: 268 LKSGVDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKER 327
           LKSGVDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVR ILSQTC ER
Sbjct: 244 LKSGVDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTER 303

Query: 328 QMVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVAL 387
           QMVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDR+RD+RLVAL
Sbjct: 304 QMVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVAL 363

Query: 388 LEKYHKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSS 447
           LEKYHKSQRNRVLVFVLYKNEA+RVE MLQRRGWKAVSIHGDKAQTERTKALSLFKSGS 
Sbjct: 364 LEKYHKSQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSY 423

Query: 448 PLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGL 507
           PLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQ+KGL
Sbjct: 424 PLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQSKGL 483

Query: 508 AGELVNVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFDDSDDED 567
           AGELVNVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITF+DSDDED
Sbjct: 484 AGELVNVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDDED 542

[Close]

BLAST of CmoCh19G002240 vs. ExPASy TrEMBL
Match: A0A5A7VL81 (DEAD-box ATP-dependent RNA helicase 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00600 PE=3 SV=1)

HSP 1 Score: 941.8 bits (2433), Expect = 1.3e-270
Identity = 494/534 (92.51%), Postives = 510/534 (95.51%), Query Frame = 0


Query: 33  MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 92
           MVGKL+ED+T+SE +AQ+ FEK D+KAEKKKKKKK RD DS C EENEVSPK KLQEGTD
Sbjct: 1   MVGKLKEDSTISEQLAQKPFEKPDSKAEKKKKKKK-RDGDSVCLEENEVSPKTKLQEGTD 60

Query: 93  SEIHKKKKKHKKSKDENVSINTSDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVE 152
           SE+HKKKKKHKKSKD ++ I TSDEK+EAKVDENSTDGSVVVTGK VKEA FVPLKSFVE
Sbjct: 61  SELHKKKKKHKKSKDVSLDIKTSDEKDEAKVDENSTDGSVVVTGKDVKEAKFVPLKSFVE 120

Query: 153 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 212
           AGLPD VLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVL KR
Sbjct: 121 AGLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLKKR 180

Query: 213 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 272
           KGKMPKGRSPLCLVLSPTRELAQQISSVL+NAG+PCGV STCLYGGVSKGSQIS LKSGV
Sbjct: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLENAGKPCGVMSTCLYGGVSKGSQISCLKSGV 240

Query: 273 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 332
           DIVIGTPGRLKDLMEMEVCRL+EVSFVVLDEADRMLDMGFEPEVR ILSQTC ERQMVMF
Sbjct: 241 DIVIGTPGRLKDLMEMEVCRLAEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMF 300

Query: 333 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 392
           SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDR RD+RL ALLEKYH
Sbjct: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRLRDDRLGALLEKYH 360

Query: 393 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 452
           KSQRNRVLVFVLYKNEA+RVE MLQRRGWKAVSIHGDKAQTERTKALSLFKSGS PLMIA
Sbjct: 361 KSQRNRVLVFVLYKNEAARVERMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMIA 420

Query: 453 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 512
           TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV
Sbjct: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480

Query: 513 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFDDSDDE 567
           NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKS KITF+DSDDE
Sbjct: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSKKITFNDSDDE 533

[Close]

BLAST of CmoCh19G002240 vs. ExPASy TrEMBL
Match: A0A1S3CNI1 (DEAD-box ATP-dependent RNA helicase 5 OS=Cucumis melo OX=3656 GN=LOC103502795 PE=3 SV=1)

HSP 1 Score: 941.8 bits (2433), Expect = 1.3e-270
Identity = 494/534 (92.51%), Postives = 510/534 (95.51%), Query Frame = 0


Query: 33  MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 92
           MVGKL+ED+T+SE +AQ+ FEK D+KAEKKKKKKK RD DS C EENEVSPK KLQEGTD
Sbjct: 1   MVGKLKEDSTISEQLAQKPFEKPDSKAEKKKKKKK-RDGDSVCLEENEVSPKTKLQEGTD 60

Query: 93  SEIHKKKKKHKKSKDENVSINTSDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVE 152
           SE+HKKKKKHKKSKD ++ I TSDEK+EAKVDENSTDGSVVVTGK VKEA FVPLKSFVE
Sbjct: 61  SELHKKKKKHKKSKDVSLDIKTSDEKDEAKVDENSTDGSVVVTGKDVKEAKFVPLKSFVE 120

Query: 153 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 212
           AGLPD VLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVL KR
Sbjct: 121 AGLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLKKR 180

Query: 213 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 272
           KGKMPKGRSPLCLVLSPTRELAQQISSVL+NAG+PCGV STCLYGGVSKGSQIS LKSGV
Sbjct: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLENAGKPCGVMSTCLYGGVSKGSQISCLKSGV 240

Query: 273 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 332
           DIVIGTPGRLKDLMEMEVCRL+EVSFVVLDEADRMLDMGFEPEVR ILSQTC ERQMVMF
Sbjct: 241 DIVIGTPGRLKDLMEMEVCRLAEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMF 300

Query: 333 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 392
           SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDR RD+RL ALLEKYH
Sbjct: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRLRDDRLGALLEKYH 360

Query: 393 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 452
           KSQRNRVLVFVLYKNEA+RVE MLQRRGWKAVSIHGDKAQTERTKALSLFKSGS PLMIA
Sbjct: 361 KSQRNRVLVFVLYKNEAARVERMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMIA 420

Query: 453 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 512
           TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV
Sbjct: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480

Query: 513 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFDDSDDE 567
           NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKS KITF+DSDDE
Sbjct: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSKKITFNDSDDE 533

[Close]

BLAST of CmoCh19G002240 vs. TAIR 10
Match: AT1G31970.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 684.1 bits (1764), Expect = 9.5e-197
Identity = 368/539 (68.27%), Postives = 434/539 (80.52%), Query Frame = 0


Query: 33  MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 92
           M G+ +E     EP+A E+      K +KK KK K+ +++   +E  +       +E ++
Sbjct: 1   MAGQKQELPVSGEPLAVES--PMTNKKKKKSKKNKHTEENHEVEEVPQEVTNGVEEELSN 60

Query: 93  SEIHKKKKKHKKSKDENVSINTSDEKEEAK--VDENSTDGSVVVTGKGVKEAGFVPLKSF 152
            E  KK+K+ +K  ++N   +  ++K EA+   +  S    VVVTGKGV+EA +  LK+F
Sbjct: 61  KEKKKKRKREEKESEKNKKKDVPEKKLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTF 120

Query: 153 VEAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVL- 212
            E+ LP+ VL+CC+TF+ PSPIQSH WPFLL GRD IGIA TGSGKTLAFG+P IMHVL 
Sbjct: 121 AESNLPENVLDCCKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLK 180

Query: 213 -NKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSL 272
            NK+ G   K  +P CLVLSPTRELA QIS VL+ AGEPCG+ S C+YGG SKG QIS++
Sbjct: 181 KNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAI 240

Query: 273 KSGVDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQ 332
           +SGVDIVIGTPGRL+DL+E  V RLS+VSFVVLDEADRMLDMGFE  VRFILS T K RQ
Sbjct: 241 RSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQ 300

Query: 333 MVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALL 392
           MVMFSATWPL V++LAQEFMDP+P+KV++GS DLAANHDVMQI+EVLD+R+RD RL+ALL
Sbjct: 301 MVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALL 360

Query: 393 EKYHKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSP 452
           EKYHKSQ+NRVLVF LYK EA R+E  LQ+RGWKAVSIHG+KAQ+ERT++LSLFK GS P
Sbjct: 361 EKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCP 420

Query: 453 LMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLA 512
           L++ATDVAARGLDIPDVEVVINY+FPLTTEDYVHRIGRTGRAGKKGVAHTFF   NKGLA
Sbjct: 421 LLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLA 480

Query: 513 GELVNVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFDDSDDED 568
           GELVNVLREA QVVP  LLKFGTHVKKKESKLYGAHFKEI ADAPK+TKITFD+SDDED
Sbjct: 481 GELVNVLREAGQVVPADLLKFGTHVKKKESKLYGAHFKEIAADAPKATKITFDNSDDED 537

[Close]

BLAST of CmoCh19G002240 vs. TAIR 10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 372.1 bits (954), Expect = 8.0e-103
Identity = 203/413 (49.15%), Postives = 269/413 (65.13%), Query Frame = 0


Query: 120 EAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLECCRT--FKSPSPIQSHAW 179
           + +V+E      + V GK + +    P+KSF + G PD VLE  +   F  P+PIQS  W
Sbjct: 75  DTEVEEYRKLREITVEGKDIPK----PVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGW 134

Query: 180 PFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQQI 239
           P  + GRD IGIA TGSGKTL++ +P I+HV    +  +  G  P+ LVL+PTRELA QI
Sbjct: 135 PMAMKGRDLIGIAETGSGKTLSYLLPAIVHV--NAQPMLAHGDGPIVLVLAPTRELAVQI 194

Query: 240 SSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLKDLMEMEVCRLSEVS 299
                  G    + +TC+YGGV KG Q+  L+ GV+IVI TPGRL D+ME     L  V+
Sbjct: 195 QQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVT 254

Query: 300 FVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMFSATWPLQVNQLAQEFMDPDPVKVVV 359
           ++VLDEADRMLDMGF+P++R I+S    +RQ + +SATWP +V QL+++F+  +P KV++
Sbjct: 255 YLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFL-YNPYKVII 314

Query: 360 GSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYHKSQRNRVLVFVLYKNEASRVENMLQ 419
           GS DL AN  + QIV+V+ +  + N+LV LLE       +R+LVF+  K    ++   L+
Sbjct: 315 GSSDLKANRAIRQIVDVISESQKYNKLVKLLEDI--MDGSRILVFLDTKKGCDQITRQLR 374

Query: 420 RRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGLDIPDVEVVINYSFPLTT 479
             GW A+SIHGDK+Q ER   LS F+SG SP+M ATDVAARGLD+ DV+ VINY FP + 
Sbjct: 375 MDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSL 434

Query: 480 EDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVVPDALLKFG 531
           EDYVHRIGRTGRAG KG A+TFF   N   A EL N+L+EA Q V   L   G
Sbjct: 435 EDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSPELASMG 478

[Close]

BLAST of CmoCh19G002240 vs. TAIR 10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 372.1 bits (954), Expect = 8.0e-103
Identity = 202/423 (47.75%), Postives = 275/423 (65.01%), Query Frame = 0


Query: 106 KDENVSINTSDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLECCRT 165
           K+  V   T     E  V    T+  + V G+ V +    P+K F +A  PD +LE    
Sbjct: 127 KNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPK----PMKMFQDANFPDNILEAIAK 186

Query: 166 --FKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPL 225
             F  P+PIQ+  WP  L GRD IGIA TGSGKTLA+ +P ++HV    + ++ +   P+
Sbjct: 187 LGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHV--SAQPRLGQDDGPI 246

Query: 226 CLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLK 285
            L+L+PTRELA QI    +  G   GV STC+YGG  KG QI  L+ GV+IVI TPGRL 
Sbjct: 247 VLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLI 306

Query: 286 DLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMFSATWPLQVNQL 345
           D++E +   L  V+++VLDEADRMLDMGFEP++R I+SQ   +RQ +++SATWP +V  L
Sbjct: 307 DMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETL 366

Query: 346 AQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYHKSQRNRVLVFV 405
           A++F+  DP K ++GS DL AN  + Q++E++    + NRL+ LL++      +++L+FV
Sbjct: 367 ARQFL-RDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQL--MDGSKILIFV 426

Query: 406 LYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGLDIP 465
             K    +V   L+  GW A++IHGDK Q+ER + L+ FKSG SP+M ATDVAARGLD+ 
Sbjct: 427 ETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVK 486

Query: 466 DVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVVP 525
           D++ V+NY FP T EDY+HRIGRTGRAG KG+A TFF   N   A ELV +L+EA QVVP
Sbjct: 487 DIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVP 540

Query: 526 DAL 527
             L
Sbjct: 547 PTL 540

[Close]

BLAST of CmoCh19G002240 vs. TAIR 10
Match: AT5G14610.2 (DEAD box RNA helicase family protein )

HSP 1 Score: 323.6 bits (828), Expect = 3.3e-88
Identity = 171/389 (43.96%), Postives = 249/389 (64.01%), Query Frame = 0


Query: 146 PLKSFVEAGLPDAVLE--CCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVP 205
           PL SF   GLP+ +L       F +PSPIQ+ +WP  +  RD + IA TGSGKTL + +P
Sbjct: 159 PLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP 218

Query: 206 GIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGS 265
           G MH+   ++        P  LVLSPTRELA QI       G+   ++  CLYGG  KG 
Sbjct: 219 GFMHL---QRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGP 278

Query: 266 QISSLKSGVDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQT 325
           Q+  ++ GVDIV+ TPGRL D++EM+   L +VS++VLDEADRMLDMGFEP++R I+++ 
Sbjct: 279 QLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEV 338

Query: 326 CKERQMVMFSATWPLQVNQLAQEFMDPDPVKVVVGS-EDLAANHDVMQIVEVLDDRSRDN 385
             +RQ +M++ATWP +V ++A + +  +P +V +G+ ++L AN  + Q +EVL    + +
Sbjct: 339 PTKRQTLMYTATWPKEVRKIAADLL-VNPAQVNIGNVDELVANKSITQTIEVLAPMEKHS 398

Query: 386 RLVALLEKYHKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLF 445
           RL  +L    +   +++++F   K    ++   L R  + A +IHGDK+Q ER   L+ F
Sbjct: 399 RLEQILRS--QEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQF 458

Query: 446 KSGSSPLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQ 505
           +SG +P+++ATDVAARGLD+ D+ VV+NY FP   EDYVHRIGRTGRAG  G+A+TFF  
Sbjct: 459 RSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGD 518

Query: 506 QNKGLAGELVNVLREAKQVVPDALLKFGT 532
           Q+   A +L+ +L  A Q VP  + +  T
Sbjct: 519 QDAKHASDLIKILEGANQKVPPQVREMAT 540

[Close]

BLAST of CmoCh19G002240 vs. TAIR 10
Match: AT3G06480.1 (DEAD box RNA helicase family protein )

HSP 1 Score: 314.7 bits (805), Expect = 1.5e-85
Identity = 176/395 (44.56%), Postives = 242/395 (61.27%), Query Frame = 0


Query: 132 VVVTGKGVKEAGFVPLKSFVEAGLPDAVLE--CCRTFKSPSPIQSHAWPFLLHGRDFIGI 191
           V  TG+ +      P  +F  +GLP  +L       F SP+PIQ+  WP  L  RD + I
Sbjct: 423 VTTTGENIP----APYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAI 482

Query: 192 AATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCG 251
           A TGSGKTL + +P  + + + R         P  L+L+PTRELA QI       G    
Sbjct: 483 AKTGSGKTLGYLIPAFILLRHCRNDSR---NGPTVLILAPTRELATQIQDEALRFGRSSR 542

Query: 252 VTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLD 311
           ++ TCLYGG  KG Q+  L+ G DIV+ TPGRL D++EM++    +VS +VLDEADRMLD
Sbjct: 543 ISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLD 602

Query: 312 MGFEPEVRFILSQTCKERQMVMFSATWPLQVNQLAQEFMDPDPVKVVVGS-EDLAANHDV 371
           MGFEP++R I+++    RQ +M++ATWP +V ++A + +  +PV+V +G  ++LAAN  +
Sbjct: 603 MGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLL-VNPVQVNIGRVDELAANKAI 662

Query: 372 MQIVEVLDDRSRDNRLVALLEKYHKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHG 431
            Q VEV+    ++ RL  +L    +   ++V++F   K     +   + R  + AV IHG
Sbjct: 663 TQYVEVVPQMEKERRLEQILRSQERG--SKVIIFCSTKRLCDHLARSVGRH-FGAVVIHG 722

Query: 432 DKAQTERTKALSLFKSGSSPLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTG 491
           DK Q ER   L+ F+SG S ++IATDVAARGLDI D+ VVINY FP   EDYVHRIGRTG
Sbjct: 723 DKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTG 782

Query: 492 RAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVVP 524
           RAG  GVA TFF +Q+   A +L+ VL  A Q VP
Sbjct: 783 RAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVP 806

The following BLAST results are available for this feature:

BLAST of CmoCh19G002240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C551	1.3e-195	68.27	DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana OX=3702 GN=RH5 PE=...	[more]
Q6YS30	1.6e-193	71.04	DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
A5E1W4	1.6e-108	45.24	ATP-dependent RNA helicase DBP3 OS=Lodderomyces elongisporus (strain ATCC 11503 ...	[more]
A5DAC8	2.1e-108	46.03	ATP-dependent RNA helicase DBP3 OS=Meyerozyma guilliermondii (strain ATCC 6260 /...	[more]
Q6CT46	2.8e-108	47.06	ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS ...	[more]

BLAST of CmoCh19G002240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLR1	3.7e-297	100.00	DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HUH8	1.7e-289	97.95	DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1K5T0	5.4e-272	91.48	LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita max...	[more]
A0A5A7VL81	1.3e-270	92.51	DEAD-box ATP-dependent RNA helicase 5 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CNI1	1.3e-270	92.51	DEAD-box ATP-dependent RNA helicase 5 OS=Cucumis melo OX=3656 GN=LOC103502795 PE...	[more]

BLAST of CmoCh19G002240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31970.1	9.5e-197	68.27	DEA(D/H)-box RNA helicase family protein	[more]
AT1G55150.1	8.0e-103	49.15	DEA(D/H)-box RNA helicase family protein	[more]
AT5G63120.2	8.0e-103	47.75	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G14610.2	3.3e-88	43.96	DEAD box RNA helicase family protein	[more]
AT3G06480.1	1.5e-85	44.56	DEAD box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 165..371 e-value: 8.2E-62 score: 221.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 177..354 score: 30.880259
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 410..491 e-value: 1.4E-32 score: 124.2
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 382..491 e-value: 6.9E-29 score: 100.4
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 383..530 score: 22.150768
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 358..533 e-value: 6.8E-54 score: 183.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 88..357 e-value: 4.2E-76 score: 257.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 221..504
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 171..341 e-value: 3.0E-47 score: 160.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..131
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 34..553
None	No IPR available	PANTHER	PTHR47958:SF82	BNAA08G07020D PROTEIN	coord: 34..553
None	No IPR available	CDD	cd00268	DEADc	coord: 166..355 e-value: 1.2013E-94 score: 285.49
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 368..500 e-value: 6.65393E-57 score: 185.018
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 300..308
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 148..174 score: 8.506117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G002240.1	CmoCh19G002240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding