CmoCh19G001780 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G001780
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Cyclin-dependent kinase inhibitor
Location	Cmo_Chr19: 1163899 .. 1166521 (-)
RNA-Seq Expression	CmoCh19G001780
Synteny	CmoCh19G001780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAGTACATGAAGAAATCCAAGCTTACTGGCGACATTGCTCTCATGGAAGTCTCAATGCTGTCTTCTCAGGGACTCCGTCCTAGAGCGGCTAAAATCCTTGCCTTACAGCGCCTCAACAAGTCCTCCTCTCAATCTGTCGCTGCTTCCAGTCCTACGCCGCTTTCTTCTTCTTCTTCTTCCTATTTGCATCTTCGGAGACGCCGGCTTGAGAACGGCGAGTGTTGCAGAGCTCGCTTAACTCCTGAATGTTCCTCGACTGGTTCACGCTTGATGCGGGATTCGGCGAATTCGGAGAAGAGTGGAAATGTTTCGGATGTCGAAGACTGTCGGGAATTTGGAGGTGAAAATTGGTATGGTTTCTAGAACTTTTCTGGAAGTATTGTTATTTTTGTTCAATTTTAGCTCAGTGTTCTTTGATTTATTGGCTGCTATTTTATTGTCGTTTTCGTCCATATTTCGTTTTGCTCTGTTAAAATGGTTGTCTCTAGTTCATCGGTTTCACTGATTTCCCCTTTTTTGATCATATTATATGTATGTCTTCGGAATTTTGTTTGCTCATAGGGTTGATGTATCGATTTCTAGTCAAATGGATGGGCTCACTCTGCGAACATGTGCTATCGTTTGACTATTACTATGTTCGTACTGGGTTTTCCCCCTTTTATTGACTTTGCTTTCCACTTCACATCCTGTAGTTCTATTGTTTCTATCTGTGGCTGTGGTGCATCTTTCGTGAAAGGCTAGTTAAGCTGATAAGATGTGACTTTAGGAGTACTTCTTTAGTATATGCATCTCTTTTATGTCTGGCCCAACTGCCCCCATGTAGCTTTTAAGCATCGCAGGTTTTATTTTCCAATATATGACAAAATTTCTTAATTTTTCTCTGCTACCAAGAATATGTTATAGACTTAAATTGTTGAATTTTTGTTGCTACATCAGCTTTTGGCATGAAAACTTTGGATAATGTGTCGGAAATGGCCGAAATAGCTCAATTGGTAGAGTAGAGGACTGAAAATTCTCGTGTCACCAGTTCAAATCTGGTATTAAAATAAGGATAATGTGTCGAAAATGACCAGGATAGCTCAGTTGGTATGAAAATCCTGTCACCCGGTTTAAATCTGGTATTAAAAGAAGGATAATGTGTCAGAAATGGTCGGAATAGTTCAATTGGTAGAATAGAGGACTGAAAATTCTCACGTCACCAGTTCAAATCTGGTATTAAAATAAGAATAATGTATCGAAAATAGCCAGGATAATATGTTAAAAATGACCGAAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCATCCATTCGATCAAAGTTTTACTTGCATTAATTTGATTGAAATAGTTATTGCCTGCAGCATATGTCGTTTTCTTGGGGCTGAGCCTAGTTTGGTACTTGAAACGTGTAGGTAACAAGAAGTTATATTTTATAAAATCTATTTTGTGCCATATTTTGTACTAATAGCCAAATTTGAGCTTGTCCCATTAGACTTGGCATATTCCTTCCAAGAGATTCGATGCCGTGCAGTGTGTACATGAAAAGTAAACGCTACTTGGAAAAAGAAGGGATAGTAAATTTAATTAATGTATTCTTAAGGGCAAGCTTTTGAACTAGTTAGTCGAGTCGATCAAGCATAAACAGATATTTTTTTTCTAAAACTAGTCGGAACCTCAGTATTCTATAACTCTTCGGAGGTTTACAAATTTTCACTAAGTGATTCAAGCACTGTTGTGTAGGGGAACTGCAGAAAAAATACACGGCAGCATGGCTAAGGATTCAAGCACCAACGAAACACCTCTTTCAACAAGGACGGAGATGAATTCATGTTCAACCAAATCAAGAGGACAGATGGAATTGCTTAAAAGTTTCCCTACAGCAAATGATATAGAGGAGTTCTTCGCACAGGAAGAACTATGGCAACAAAGAACATTTATTCAAAAGTAGGTGAAATAATTTATCTTTATGATACGTGCTTTGATTAGAAAATCATTATCAAGATTATGTTTAGATAGTGTTGCTAGAGCCAACTCTATGAACGAACTATAGCAGCAGTGAGCTCAAGAGCGAACTGATTGAGTTGATCGAGTTGATCGTTAATTTTTGTGTAGGATATGCTTTTCTGTCTGTCATGTCGATCACCTTACATGTGTGTGGATCTTTGCAGGTATAACTTCGACTTCGCAAGTGATATGCCCCTCCCAGGACGATACGAATGGGTGCAAGTGGCTCCTTAAGTAGCTATGATCTCAAATATCTCTATCGAGCTCGCGTTGGGGATCCCGAGATGGGTCGAAGACAGGCATTGAGCTCACCATAGTACCACAAAGTTAGGACATCTCATACTAACCGGCTTTTAATCCATCTTTAGTTGGAGACATTTGGGGAAATGGGTAGTATATATGCATTTGTAATACTTATTATGTTAGCCGCTTGTGCGGTCTATATGTGGTTAGTTTGTCTTGGAAAGTAGTAAAATAGTGTACGTACTTTCTCACTGTTCATAGTTCCGTTTGTAATCGCAGCACCAAATGAAGAATATTAGCATCCTAAAACGAGCATCGAGTGGCAGTTAGTTTCGGGAGCCAACATCATCAAATTTAGG

mRNA sequence

ATGGGAAAGTACATGAAGAAATCCAAGCTTACTGGCGACATTGCTCTCATGGAAGTCTCAATGCTGTCTTCTCAGGGACTCCGTCCTAGAGCGGCTAAAATCCTTGCCTTACAGCGCCTCAACAAGTCCTCCTCTCAATCTGTCGCTGCTTCCAGTCCTACGCCGCTTTCTTCTTCTTCTTCTTCCTATTTGCATCTTCGGAGACGCCGGCTTGAGAACGGCGAGTGTTGCAGAGCTCGCTTAACTCCTGAATGTTCCTCGACTGGTTCACGCTTGATGCGGGATTCGGCGAATTCGGAGAAGAGTGGAAATGTTTCGGATGTCGAAGACTGTCGGGAATTTGGAGCACTGTTGTGTAGGGGAACTGCAGAAAAAATACACGGCAGCATGGCTAAGGATTCAAGCACCAACGAAACACCTCTTTCAACAAGGACGGAGATGAATTCATGTTCAACCAAATCAAGAGGACAGATGGAATTGCTTAAAAGTTTCCCTACAGCAAATGATATAGAGGAGTTCTTCGCACAGGAAGAACTATGGCAACAAAGAACATTTATTCAAAAGTATAACTTCGACTTCGCAAGTGATATGCCCCTCCCAGGACGATACGAATGGGTGCAAGTGGCTCCTTAAGTAGCTATGATCTCAAATATCTCTATCGAGCTCGCGTTGGGGATCCCGAGATGGGTCGAAGACAGGCATTGAGCTCACCATAGTACCACAAAGTTAGGACATCTCATACTAACCGGCTTTTAATCCATCTTTAGTTGGAGACATTTGGGGAAATGGGTAGTATATATGCATTTGTAATACTTATTATGTTAGCCGCTTGTGCGGTCTATATGTGGTTAGTTTGTCTTGGAAAGTAGTAAAATAGTGTACGTACTTTCTCACTGTTCATAGTTCCGTTTGTAATCGCAGCACCAAATGAAGAATATTAGCATCCTAAAACGAGCATCGAGTGGCAGTTAGTTTCGGGAGCCAACATCATCAAATTTAGG

Coding sequence (CDS)

ATGGGAAAGTACATGAAGAAATCCAAGCTTACTGGCGACATTGCTCTCATGGAAGTCTCAATGCTGTCTTCTCAGGGACTCCGTCCTAGAGCGGCTAAAATCCTTGCCTTACAGCGCCTCAACAAGTCCTCCTCTCAATCTGTCGCTGCTTCCAGTCCTACGCCGCTTTCTTCTTCTTCTTCTTCCTATTTGCATCTTCGGAGACGCCGGCTTGAGAACGGCGAGTGTTGCAGAGCTCGCTTAACTCCTGAATGTTCCTCGACTGGTTCACGCTTGATGCGGGATTCGGCGAATTCGGAGAAGAGTGGAAATGTTTCGGATGTCGAAGACTGTCGGGAATTTGGAGCACTGTTGTGTAGGGGAACTGCAGAAAAAATACACGGCAGCATGGCTAAGGATTCAAGCACCAACGAAACACCTCTTTCAACAAGGACGGAGATGAATTCATGTTCAACCAAATCAAGAGGACAGATGGAATTGCTTAAAAGTTTCCCTACAGCAAATGATATAGAGGAGTTCTTCGCACAGGAAGAACTATGGCAACAAAGAACATTTATTCAAAAGTATAACTTCGACTTCGCAAGTGATATGCCCCTCCCAGGACGATACGAATGGGTGCAAGTGGCTCCTTAA

Protein sequence

MGKYMKKSKLTGDIALMEVSMLSSQGLRPRAAKILALQRLNKSSSQSVAASSPTPLSSSSSSYLHLRRRRLENGECCRARLTPECSSTGSRLMRDSANSEKSGNVSDVEDCREFGALLCRGTAEKIHGSMAKDSSTNETPLSTRTEMNSCSTKSRGQMELLKSFPTANDIEEFFAQEELWQQRTFIQKYNFDFASDMPLPGRYEWVQVAP

Homology

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BLAST of CmoCh19G001780 vs. ExPASy Swiss-Prot
Match: Q9FKB5 (Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=KRP3 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-27
Identity = 93/229 (40.61%), Postives = 122/229 (53.28%), Query Frame = 0


Query: 1   MGKYMKKSKLTGDIALMEVSMLS--SQGLRPRAAKILALQRLNKSSSQSVAASSPTPLSS 60
           MGKYMKKSK+TGDI++MEVS  +  S G+R RAAK LAL+RLN S++ S        L +
Sbjct: 1   MGKYMKKSKITGDISVMEVSKATAPSPGVRTRAAKTLALKRLNSSAADSA-------LPN 60

Query: 61  SSSSYLHLRRRRLENGECCRARLTPE------CSSTGSRLMRDSANSEKSGNVSDVEDCR 120
            SS YL LR RRLE          P          +GSR   DS NS      S+ ++C 
Sbjct: 61  DSSCYLQLRSRRLEKPSSLIEPKQPPRVHRSGIKESGSRSRVDSVNSVPVAQSSNEDECF 120

Query: 121 EFGALLCRGTAEKIHGSMAKDSSTNETPLSTRTEMN-----SCSTKS--RGQMELLKS-- 180
           +    +     E   G  ++ S+   TP +   +M        ST+S  R   E  +   
Sbjct: 121 DNFVSVQVSCGENSLGFESRHSTRESTPCNFVEDMEIMVTPGSSTRSMCRATKEYTREQD 180

Query: 181 --FPTANDIEEFFAQEELWQQRTFIQKYNFDFASDMPLPGRYEWVQVAP 211
              PT +++EEFFA  E  QQR F++KYNFD  +D+PL GRYEWVQV P
Sbjct: 181 NVIPTTSEMEEFFAYAEQQQQRLFMEKYNFDIVNDIPLSGRYEWVQVKP 222

[Close]

BLAST of CmoCh19G001780 vs. ExPASy Swiss-Prot
Match: Q9LRY0 (Cyclin-dependent kinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=KRP5 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.8e-18
Identity = 71/216 (32.87%), Postives = 102/216 (47.22%), Query Frame = 0


Query: 1   MGKYMKKSKLTGDIALMEVSMLSSQGLRPR--AAKILALQRLNKSSSQSVAASSPTPLSS 60
           MGKY+KKSK+ G +++ + S   + G R R  AAK LAL RL   S +           +
Sbjct: 1   MGKYIKKSKVAGAVSVKDKSHPPALGFRTRAAAAKNLALHRLRSHSDE-----------A 60

Query: 61  SSSSYLHLRRRRLENGECCRARLTPECSSTGSRLMRDSANSEKSGNVSDVEDCREFGALL 120
            S +YL LR RRL                    L+ ++   +K   +  V  C+      
Sbjct: 61  DSFNYLQLRSRRL----------------VKLPLLTNTRKQQKQQLIPSVNQCQTKNPRA 120

Query: 121 CRGTAEKIHGSMAKDSSTNETPLSTRTEMN----SCSTKSRGQMELLKSFPTANDIEEFF 180
             G A+K+      + +  +    +R++ N        +S  +  +  S    ++IE+FF
Sbjct: 121 SSGPAKKLEPDTTTEEACGDNERISRSDCNFGDKGFDLESENRSMISDSKSIQSEIEDFF 180

Query: 181 AQEELWQQRTFIQKYNFDFASDMPLPGRYEWVQVAP 211
           A  E  QQR FIQKYNFD  SD PLPGRYEWV+V P
Sbjct: 181 ASAEQQQQRFFIQKYNFDIVSDNPLPGRYEWVKVMP 189

[Close]

BLAST of CmoCh19G001780 vs. ExPASy Swiss-Prot
Match: Q283L0 (Cyclin-dependent kinase inhibitor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=KRP5 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.1e-15
Identity = 72/226 (31.86%), Postives = 110/226 (48.67%), Query Frame = 0


Query: 1   MGKYMKKSKLTGDIALMEVSMLSSQGLRPRAAKILALQRLNKSSS-QSVAASSPTPLSSS 60
           MGKYM+K K++G++A+MEV   +  G+R R ++ LALQR   S          P   + +
Sbjct: 1   MGKYMRKGKVSGEVAVMEVGG-ALLGVRTR-SRTLALQRTTSSQKPPEKGEGDPGAGAGA 60

Query: 61  SSSYLHLRRRRLEN--------GECCRARLTPECSSTGSRLMRDSANSEK---------S 120
            + YL LR RRLE          E   AR     ++   R+      +E+          
Sbjct: 61  GAEYLELRSRRLEKPPPHTPPAKEKETARRASAAAAAAVRMPAAPQAAEEFEAEVEVSFG 120

Query: 121 GNVSDVEDCREFGALLCRGTAEKIHGSMAKDSSTNETPLSTRTEMNSCSTKSRGQMELLK 180
            NV D++     G  + R T E    S+ + S    TP ST     S S++ R +  + +
Sbjct: 121 DNVLDLD-----GDAMERSTRETTPCSLIRSSEMISTPGSTTKTNTSISSRRRMETSVCR 180

Query: 181 SFPTANDIEEFFAQEELWQQRTFIQKYNFDFASDMPLPGRYEWVQV 209
             P++ ++EEFFA  E  Q + F ++YNF   +D PLPGRYEW ++
Sbjct: 181 YVPSSLEMEEFFAAAEQQQHQAFRERYNFCPVNDCPLPGRYEWTRL 219

[Close]

BLAST of CmoCh19G001780 vs. ExPASy Swiss-Prot
Match: Q7XDH8 (Cyclin-dependent kinase inhibitor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=KRP4 PE=2 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 5.2e-12
Identity = 71/217 (32.72%), Postives = 101/217 (46.54%), Query Frame = 0


Query: 1   MGKYMKKSK--LTGDIALMEVSMLSSQ--GLRPRAAKILALQRLNKSSSQSVAASSPTPL 60
           MGKYM+K+K  ++G++    V  L++   G+R R A+ LALQ+                 
Sbjct: 1   MGKYMRKAKVVVSGEVVAAAVMELAAAPLGVRTR-ARSLALQK----------------- 60

Query: 61  SSSSSSYLHLRRRRLEN-----GECCRARLTPECSSTGSRLMRDSANSEKSGNVSDVEDC 120
                 YL LR RRLE          R R T   ++T      +SA +E S    +V + 
Sbjct: 61  -RQGGEYLELRSRRLEKLPPPPPPPPRRRAT-AAAATADATAAESAEAEVSFGGENVLEL 120

Query: 121 REFGALLCRGTAEKIHGSMAKDSSTNETPLSTRTEMNSCSTKSRGQMELLKSFPTANDIE 180
                 + R T E    S+ +D  T  TP ST    +S S             P + ++E
Sbjct: 121 E----AMERNTRETTPCSLIRDPDTISTPGSTTRRSHSSSHCKVQTPVRHNIIPASAELE 180

Query: 181 EFFAQEELWQQRTFIQKYNFDFASDMPLPGRYEWVQV 209
            FFA EE  Q++ FI KYNFD  +D PLPGR+EWV++
Sbjct: 181 AFFAAEEQRQRQAFIDKYNFDPVNDCPLPGRFEWVKL 193

[Close]

BLAST of CmoCh19G001780 vs. ExPASy Swiss-Prot
Match: Q94CL9 (Cyclin-dependent kinase inhibitor 7 OS=Arabidopsis thaliana OX=3702 GN=KRP7 PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07
Identity = 47/181 (25.97%), Postives = 84/181 (46.41%), Query Frame = 0


Query: 37  LQRLNKSSSQSVAASSPTPLSSSSSSYLHLRRRRLENGECCRARLTPECSSTGSRLMRDS 96
           ++R+       V  S    LSSSSSS   L     ++G  C   L+ E     S  +   
Sbjct: 17  IKRMRLDDDDDVLRSPTRTLSSSSSS--SLAYSVSDSGGFCSVALSEEEDDHLSSSISSG 76

Query: 97  ANSEKSGNVSDVEDCREFGALLCRGT--AEKIHGSMAKDSSTNETPLSTRTEMNSCSTKS 156
            +S ++  ++      +  A     T  +  +  +  K   ++   L    EM+S +T+ 
Sbjct: 77  CSSSETNEIATRLPFSDLEAHEISETEISTLLTNNFRKQGISSSENLGETAEMDSATTEM 136

Query: 157 RGQMEL-----LKSFPTANDIEEFFAQEELWQQRTFIQKYNFDFASDMPLPGRYEWVQVA 211
           R Q +      ++  PT  ++++FF+  E ++Q+ F +KYN+D  +D PL GRY+WV + 
Sbjct: 137 RDQRKTEKKKKMEKSPTQAELDDFFSAAERYEQKRFTEKYNYDIVNDTPLEGRYQWVSLK 195

[Close]

BLAST of CmoCh19G001780 vs. ExPASy TrEMBL
Match: A0A6J1HFT8 (Cyclin-dependent kinase inhibitor OS=Cucurbita moschata OX=3662 GN=LOC111463919 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.6e-104
Identity = 205/210 (97.62%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MGKYMKKSKLTGDIALMEVSMLSSQGLRPRAAKILALQRLNKSSSQSVAASSPTPLSSSS 60
           MGKYMKKSKLTGDIALMEVSMLSSQGLRPRAAKILALQRLNKSSSQSVAASSPTPLSSSS
Sbjct: 1   MGKYMKKSKLTGDIALMEVSMLSSQGLRPRAAKILALQRLNKSSSQSVAASSPTPLSSSS 60

Query: 61  SSYLHLRRRRLENGECCRARLTPECSSTGSRLMRDSANSEKSGNVSDVEDCREFGALLCR 120
           SSYLHLRRRRLENGECCRARLTPECSSTGSRLMRDSANSEKSGNVSDVEDCREFG     
Sbjct: 61  SSYLHLRRRRLENGECCRARLTPECSSTGSRLMRDSANSEKSGNVSDVEDCREFGGENW- 120

Query: 121 GTAEKIHGSMAKDSSTNETPLSTRTEMNSCSTKSRGQMELLKSFPTANDIEEFFAQEELW 180
           GTAEKIHGSMAKDSSTNETPLSTRTEMNSCSTKSRGQMELLKSFPTANDIEEFFAQEELW
Sbjct: 121 GTAEKIHGSMAKDSSTNETPLSTRTEMNSCSTKSRGQMELLKSFPTANDIEEFFAQEELW 180

Query: 181 QQRTFIQKYNFDFASDMPLPGRYEWVQVAP 211
           QQRTFIQKYNFDFASDMPLPGRYEWVQVAP
Sbjct: 181 QQRTFIQKYNFDFASDMPLPGRYEWVQVAP 209

[Close]

BLAST of CmoCh19G001780 vs. ExPASy TrEMBL
Match: A0A6J1HUS7 (Cyclin-dependent kinase inhibitor OS=Cucurbita maxima OX=3661 GN=LOC111466887 PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.0e-95
Identity = 191/210 (90.95%), Postives = 194/210 (92.38%), Query Frame = 0


Query: 1   MGKYMKKSKLTGDIALMEVSMLSSQGLRPRAAKILALQRLNKSSSQSVAASSPTPLSSSS 60
           MGKYMKKS+LTGDIALMEVSMLSSQGL PRAAK LALQRLN SS QS AAS PTPL  SS
Sbjct: 1   MGKYMKKSELTGDIALMEVSMLSSQGLCPRAAKTLALQRLNNSSPQSAAASGPTPL--SS 60

Query: 61  SSYLHLRRRRLENGECCRARLTPECSSTGSRLMRDSANSEKSGNVSDVEDCREFGALLCR 120
           SSYLHLRRRRL+NGECCRARLTPECSS GSRLMRDSANSEKSGNVSDVEDCREFG     
Sbjct: 61  SSYLHLRRRRLDNGECCRARLTPECSSIGSRLMRDSANSEKSGNVSDVEDCREFGGENW- 120

Query: 121 GTAEKIHGSMAKDSSTNETPLSTRTEMNSCSTKSRGQMELLKSFPTANDIEEFFAQEELW 180
           GTAE IHGSMA+DSSTNETPLSTRTEMNSCSTKSRGQMELLKSFPTANDIEEFFAQEELW
Sbjct: 121 GTAENIHGSMARDSSTNETPLSTRTEMNSCSTKSRGQMELLKSFPTANDIEEFFAQEELW 180

Query: 181 QQRTFIQKYNFDFASDMPLPGRYEWVQVAP 211
           QQRTFIQKYNFDFA DMPLPGRYEWVQVAP
Sbjct: 181 QQRTFIQKYNFDFARDMPLPGRYEWVQVAP 207

[Close]

BLAST of CmoCh19G001780 vs. ExPASy TrEMBL
Match: A0A6J1K6K7 (cyclin-dependent kinase inhibitor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111491134 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 3.5e-59
Identity = 151/238 (63.45%), Postives = 162/238 (68.07%), Query Frame = 0


Query: 1   MGKYMKKSKLTGDIALMEVSMLSSQGLRPRAAKILALQRLNKSSSQSVAASSPTPLSSSS 60
           MGKYMKKSKLTG IA+MEVS  SS GLR RAAK  ALQRLNKS SQS A SSP   ++SS
Sbjct: 1   MGKYMKKSKLTGGIAVMEVSPQSSPGLRTRAAKTRALQRLNKSFSQSAAVSSPR-AAASS 60

Query: 61  SSYLHLRRRRLE-------------NGECCRARLTPECSSTGSRLMRDSAN--SEK---- 120
           SSYL LR RRLE             +GECC   L+ ECSST  RL RD A+  SEK    
Sbjct: 61  SSYLQLRNRRLEKPPVFRQLYKAQQDGECCEDGLSRECSSTDYRLKRDLADSGSEKRKLL 120

Query: 121 ----SGNVSDVED-----CREFGALLCRGTAEKIHGSMAKDSSTNETPLSTRTEMNSCST 180
               SGN  D ED     C  FG    RGTAEKI  S+ +D STNET  STRTE NS +T
Sbjct: 121 VETGSGNARDFEDYFGENCLNFGG-ENRGTAEKIRSSLVRDLSTNETSYSTRTETNSHTT 180

Query: 181 KSRGQMELLKSFPTANDIEEFFAQEELWQQRTFIQKYNFDFASDMPLPGRYEWVQVAP 211
            S  +MELLKS PTANDIEEFFAQEELW Q TFIQKYNFDFAS+MPL GRYEWVQV P
Sbjct: 181 NSGVEMELLKSTPTANDIEEFFAQEELWHQTTFIQKYNFDFASEMPLQGRYEWVQVVP 236

[Close]

BLAST of CmoCh19G001780 vs. ExPASy TrEMBL
Match: A0A6J1ETD6 (cyclin-dependent kinase inhibitor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111437387 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 7.8e-59
Identity = 149/238 (62.61%), Postives = 162/238 (68.07%), Query Frame = 0


Query: 1   MGKYMKKSKLTGDIALMEVSMLSSQGLRPRAAKILALQRLNKSSSQSVAASSPTPLSSSS 60
           MGKYMKKSKLTG IA+MEVS  SS GLR RAAK  ALQRLNKS SQS A SSP   ++SS
Sbjct: 1   MGKYMKKSKLTGGIAVMEVSPQSSPGLRTRAAKTRALQRLNKSFSQSAAVSSPR-AAASS 60

Query: 61  SSYLHLRRRRLE-------------NGECCRARLTPECSSTGSRLMRDSAN--SEK---- 120
           SSYL LR RRLE             +GECC   L+ ECSS  SRL RD A+  SEK    
Sbjct: 61  SSYLQLRNRRLEKPPVFRQLHKAQQDGECCEDGLSRECSSNDSRLKRDLADSGSEKRKLR 120

Query: 121 ----SGNVSDVED-----CREFGALLCRGTAEKIHGSMAKDSSTNETPLSTRTEMNSCST 180
               SGN  D ED     C +FG    RGTAEKIH S+ +D  TN+T  STR E NS +T
Sbjct: 121 VETGSGNARDFEDYFGENCPDFGG-DNRGTAEKIHSSLVRDLRTNKTSYSTRMETNSHTT 180

Query: 181 KSRGQMELLKSFPTANDIEEFFAQEELWQQRTFIQKYNFDFASDMPLPGRYEWVQVAP 211
            S  +MELLKS PTANDIEEFFAQEELW Q TFIQKYNFDFAS+MPL GRYEWVQV P
Sbjct: 181 NSGVEMELLKSIPTANDIEEFFAQEELWHQTTFIQKYNFDFASEMPLQGRYEWVQVVP 236

[Close]

BLAST of CmoCh19G001780 vs. ExPASy TrEMBL
Match: A0A5D3DZV8 (Cyclin-dependent kinase inhibitor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold880G00070 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.0e-50
Identity = 136/222 (61.26%), Postives = 152/222 (68.47%), Query Frame = 0


Query: 1   MGKYMKKSKLTGDIALMEVSMLSSQGLRPRAAKILALQRLNKSSSQSVAASSPTPLSSSS 60
           MGKY KKSKLT    LME+S  SS  LR RAAK LALQRLNKSS  S ++      SSSS
Sbjct: 1   MGKYFKKSKLT----LMELSPHSSPPLRTRAAKTLALQRLNKSSLSSSSS------SSSS 60

Query: 61  SSYLHLRRRRLE-----------NGECCRARLTPECSSTGSRLMRDSANSEKSGNVSDVE 120
           SSYL LR RRL+           + +CCRARL+ + SS    L   S    ++GNV DVE
Sbjct: 61  SSYLKLRSRRLQKPPILRQKPHTDDDCCRARLSLQSSSEKRNL---SLGQSQTGNVWDVE 120

Query: 121 DC-REFGALLCRGTAEKIHGSMAKDSSTNETPLSTRTEMNSCSTKSRGQMELLKSFPTAN 180
           DC REFG     GTA KIH S+A+DSSTNET  STR E    STKS  +MELLKSFPTA+
Sbjct: 121 DCFREFGGDNW-GTAGKIHSSVARDSSTNETSHSTRMETILSSTKSSVEMELLKSFPTAS 180

Query: 181 DIEEFFAQEELWQQRTFIQKYNFDFASDMPLPGRYEWVQVAP 211
           DIEEFFA EELW QRTF+QKYNFD ASDMPL GRYEWV+V P
Sbjct: 181 DIEEFFAHEELWHQRTFVQKYNFDIASDMPLQGRYEWVKVVP 208

[Close]

BLAST of CmoCh19G001780 vs. TAIR 10
Match: AT5G48820.1 (inhibitor/interactor with cyclin-dependent kinase )

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-28
Identity = 93/229 (40.61%), Postives = 122/229 (53.28%), Query Frame = 0


Query: 1   MGKYMKKSKLTGDIALMEVSMLS--SQGLRPRAAKILALQRLNKSSSQSVAASSPTPLSS 60
           MGKYMKKSK+TGDI++MEVS  +  S G+R RAAK LAL+RLN S++ S        L +
Sbjct: 1   MGKYMKKSKITGDISVMEVSKATAPSPGVRTRAAKTLALKRLNSSAADSA-------LPN 60

Query: 61  SSSSYLHLRRRRLENGECCRARLTPE------CSSTGSRLMRDSANSEKSGNVSDVEDCR 120
            SS YL LR RRLE          P          +GSR   DS NS      S+ ++C 
Sbjct: 61  DSSCYLQLRSRRLEKPSSLIEPKQPPRVHRSGIKESGSRSRVDSVNSVPVAQSSNEDECF 120

Query: 121 EFGALLCRGTAEKIHGSMAKDSSTNETPLSTRTEMN-----SCSTKS--RGQMELLKS-- 180
           +    +     E   G  ++ S+   TP +   +M        ST+S  R   E  +   
Sbjct: 121 DNFVSVQVSCGENSLGFESRHSTRESTPCNFVEDMEIMVTPGSSTRSMCRATKEYTREQD 180

Query: 181 --FPTANDIEEFFAQEELWQQRTFIQKYNFDFASDMPLPGRYEWVQVAP 211
              PT +++EEFFA  E  QQR F++KYNFD  +D+PL GRYEWVQV P
Sbjct: 181 NVIPTTSEMEEFFAYAEQQQQRLFMEKYNFDIVNDIPLSGRYEWVQVKP 222

[Close]

BLAST of CmoCh19G001780 vs. TAIR 10
Match: AT5G48820.2 (inhibitor/interactor with cyclin-dependent kinase )

HSP 1 Score: 118.2 bits (295), Expect = 7.7e-27
Identity = 94/251 (37.45%), Postives = 119/251 (47.41%), Query Frame = 0


Query: 1   MGKYMKKSKLTGDIALMEVSMLS--SQGLRPRAAKILALQRLNKSSSQSVAASSPTPLSS 60
           MGKYMKKSK+TGDI++MEVS  +  S G+R RAAK LAL+RLN S++ S        L +
Sbjct: 1   MGKYMKKSKITGDISVMEVSKATAPSPGVRTRAAKTLALKRLNSSAADSA-------LPN 60

Query: 61  SSSSYLHLRRRRLENGECCRARLTPE------CSSTGSRLMRDSANSEKSGNVSDVEDCR 120
            SS YL LR RRLE          P          +GSR   DS NS      S+ ++C 
Sbjct: 61  DSSCYLQLRSRRLEKPSSLIEPKQPPRVHRSGIKESGSRSRVDSVNSVPVAQSSNEDECF 120

Query: 121 E---------------------------------FGALLCRGTAEKIHGSMAKDSSTNET 180
           +                                 F  L+C  T E    +  +D     T
Sbjct: 121 DNFVSVQVSCGENSLGFESRHRFVVFFFFFLFFMFPLLVC--TRESTPCNFVEDMEIMVT 180

Query: 181 PLSTRTEMNSCSTKSRGQMELLKSFPTANDIEEFFAQEELWQQRTFIQKYNFDFASDMPL 211
           P S+   M  C        E     PT +++EEFFA  E  QQR F++KYNFD  +D+PL
Sbjct: 181 PGSSTRSM--CRATKEYTREQDNVIPTTSEMEEFFAYAEQQQQRLFMEKYNFDIVNDIPL 240

[Close]

BLAST of CmoCh19G001780 vs. TAIR 10
Match: AT3G24810.1 (Cyclin-dependent kinase inhibitor family protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.7e-19
Identity = 71/216 (32.87%), Postives = 102/216 (47.22%), Query Frame = 0


Query: 1   MGKYMKKSKLTGDIALMEVSMLSSQGLRPR--AAKILALQRLNKSSSQSVAASSPTPLSS 60
           MGKY+KKSK+ G +++ + S   + G R R  AAK LAL RL   S +           +
Sbjct: 1   MGKYIKKSKVAGAVSVKDKSHPPALGFRTRAAAAKNLALHRLRSHSDE-----------A 60

Query: 61  SSSSYLHLRRRRLENGECCRARLTPECSSTGSRLMRDSANSEKSGNVSDVEDCREFGALL 120
            S +YL LR RRL                    L+ ++   +K   +  V  C+      
Sbjct: 61  DSFNYLQLRSRRL----------------VKLPLLTNTRKQQKQQLIPSVNQCQTKNPRA 120

Query: 121 CRGTAEKIHGSMAKDSSTNETPLSTRTEMN----SCSTKSRGQMELLKSFPTANDIEEFF 180
             G A+K+      + +  +    +R++ N        +S  +  +  S    ++IE+FF
Sbjct: 121 SSGPAKKLEPDTTTEEACGDNERISRSDCNFGDKGFDLESENRSMISDSKSIQSEIEDFF 180

Query: 181 AQEELWQQRTFIQKYNFDFASDMPLPGRYEWVQVAP 211
           A  E  QQR FIQKYNFD  SD PLPGRYEWV+V P
Sbjct: 181 ASAEQQQQRFFIQKYNFDIVSDNPLPGRYEWVKVMP 189

[Close]

BLAST of CmoCh19G001780 vs. TAIR 10
Match: AT1G49620.1 (Cyclin-dependent kinase inhibitor family protein )

HSP 1 Score: 58.5 bits (140), Expect = 7.3e-09
Identity = 47/181 (25.97%), Postives = 84/181 (46.41%), Query Frame = 0


Query: 37  LQRLNKSSSQSVAASSPTPLSSSSSSYLHLRRRRLENGECCRARLTPECSSTGSRLMRDS 96
           ++R+       V  S    LSSSSSS   L     ++G  C   L+ E     S  +   
Sbjct: 17  IKRMRLDDDDDVLRSPTRTLSSSSSS--SLAYSVSDSGGFCSVALSEEEDDHLSSSISSG 76

Query: 97  ANSEKSGNVSDVEDCREFGALLCRGT--AEKIHGSMAKDSSTNETPLSTRTEMNSCSTKS 156
            +S ++  ++      +  A     T  +  +  +  K   ++   L    EM+S +T+ 
Sbjct: 77  CSSSETNEIATRLPFSDLEAHEISETEISTLLTNNFRKQGISSSENLGETAEMDSATTEM 136

Query: 157 RGQMEL-----LKSFPTANDIEEFFAQEELWQQRTFIQKYNFDFASDMPLPGRYEWVQVA 211
           R Q +      ++  PT  ++++FF+  E ++Q+ F +KYN+D  +D PL GRY+WV + 
Sbjct: 137 RDQRKTEKKKKMEKSPTQAELDDFFSAAERYEQKRFTEKYNYDIVNDTPLEGRYQWVSLK 195

[Close]

BLAST of CmoCh19G001780 vs. TAIR 10
Match: AT2G32710.2 (Cyclin-dependent kinase inhibitor family protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08
Identity = 78/256 (30.47%), Postives = 110/256 (42.97%), Query Frame = 0


Query: 14  IALMEV---SMLSSQGLRPRAAKILALQR------LNKSSSQS---VAASSPTPLS---- 73
           IALM+V   S  SS G+  R AK LALQ+      L K SS S     ++SP P S    
Sbjct: 31  IALMDVVSPSSSSSLGVLTR-AKSLALQQQQQRCLLQKPSSPSSLPPTSASPNPPSKQKM 90

Query: 74  -------SSSSSYLHLRRRRLE------------------NGECCRARLTPEC---SSTG 133
                  +   SYL LR RRL+                    E C     P     S  G
Sbjct: 91  KKKQQQMNDCGSYLQLRSRRLQKKPPIVVIRSTKRRKQQRRNETCGRNPNPRSNLDSIRG 150

Query: 134 SRLMRDSAN-----SEKSGNVSDVEDCREFGALLC--------RGTAEKIHGSMAKDSST 193
                DS +      +    +S++     FG            R T E    S+ +    
Sbjct: 151 DGSRSDSVSESVVFGKDKDLISEINKDPTFGQNFFDLEEEHTQRTTRESTPCSLIRRPEI 210

Query: 194 NETPLSTRTEMNSCSTKSRGQMELL----KSFPTANDIEEFFAQEELWQQRTFIQKYNFD 209
             TP S+ T++N C ++S  + + L    +  PT  +++EFF+  E  QQ+ FI+KYNFD
Sbjct: 211 MTTPGSS-TKLNICVSESNQREDSLSRSHRRRPTTPEMDEFFSGAEEEQQKQFIEKYNFD 270

The following BLAST results are available for this feature:

BLAST of CmoCh19G001780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKB5	1.5e-27	40.61	Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=KRP3 PE=1...	[more]
Q9LRY0	3.8e-18	32.87	Cyclin-dependent kinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=KRP5 PE=1...	[more]
Q283L0	5.1e-15	31.86	Cyclin-dependent kinase inhibitor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q7XDH8	5.2e-12	32.72	Cyclin-dependent kinase inhibitor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q94CL9	1.0e-07	25.97	Cyclin-dependent kinase inhibitor 7 OS=Arabidopsis thaliana OX=3702 GN=KRP7 PE=1...	[more]

BLAST of CmoCh19G001780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFT8	1.6e-104	97.62	Cyclin-dependent kinase inhibitor OS=Cucurbita moschata OX=3662 GN=LOC111463919 ...	[more]
A0A6J1HUS7	1.0e-95	90.95	Cyclin-dependent kinase inhibitor OS=Cucurbita maxima OX=3661 GN=LOC111466887 PE...	[more]
A0A6J1K6K7	3.5e-59	63.45	cyclin-dependent kinase inhibitor 3-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1ETD6	7.8e-59	62.61	cyclin-dependent kinase inhibitor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5D3DZV8	1.0e-50	61.26	Cyclin-dependent kinase inhibitor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of CmoCh19G001780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48820.1	1.1e-28	40.61	inhibitor/interactor with cyclin-dependent kinase	[more]
AT5G48820.2	7.7e-27	37.45	inhibitor/interactor with cyclin-dependent kinase	[more]
AT3G24810.1	2.7e-19	32.87	Cyclin-dependent kinase inhibitor family protein	[more]
AT1G49620.1	7.3e-09	25.97	Cyclin-dependent kinase inhibitor family protein	[more]
AT2G32710.2	1.6e-08	30.47	Cyclin-dependent kinase inhibitor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044898	Cyclin-dependent kinase inhibitor domain superfamily	GENE3D	4.10.365.10	p27	coord: 157..210 e-value: 6.5E-9 score: 37.5
IPR044275	Cyclin-dependent kinase inhibitor, plant	PIRSF	PIRSF017811	CKI_KRP_plant	coord: 1..210 e-value: 3.2E-34 score: 117.0
IPR044275	Cyclin-dependent kinase inhibitor, plant	PANTHER	PTHR46776	CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED	coord: 1..208
IPR003175	Cyclin-dependent kinase inhibitor domain	PFAM	PF02234	CDI	coord: 165..208 e-value: 4.4E-17 score: 62.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..64
None	No IPR available	PANTHER	PTHR46776:SF10	CYCLIN-DEPENDENT KINASE INHIBITOR	coord: 1..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G001780.1	CmoCh19G001780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0051726	regulation of cell cycle
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity