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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. AGATGAAAACGAGTGGCCCCAAAAGTGGAAGTCAACCATTTGTAGGAGTCACCGAGTTGGACTAAAATTGGGGTTTTGTTATTAATTTCTGCACTCACACCAATGCCATACAGGTAAGCCCAGTTGAATGTCACTCTGCAACTCTCACACTTTCCTACTCCTTTTCTAAAATGCTCAACTTCCTCAACCGGAGCCTCCGCCGCCTCTGCTCCCGTCTCCGATGGCCTCGTGCCCGGCGGGTCAGACCTAGGGTAGTCGTCATCAAGAAATTTGGAAAAACCACCTCCAAACCTCACGCCGATCCCCACAATACCCTCGACTCCTTCGTTAATGCCTCCTTGGCGTCGCCTGTGCATCCCAAACCTCAATTTCACGGTCGTAATACTCAGAGACCTGTGCGGATTGCGACATTTAATGCCGCCTCCTTCTCCATGGCACCTGCTGTTCCGTACGCTGAAAAATCTAATTCCTCTGCCAAATTCCGACGGAGTTTGGATTCCAGTTTACGGACAAAATCCGTAAATGATCGCCCCAAAAGCATTTTGAAACAGTCTCCACTGCATCCGAATTCCGTGAATGGAGTTGTTGCTAATCATAACCTCCACACCCAACCGAAGTTCGTGAAACCCAAGCCGCGGGTTTCGATCAACCTGCCTGATAACGAGATATCCTTACTCAGAAATCGACAGGCGAGCTTTTCTGAGTACGAAATGGAGAAGGAGGATCCGTCCTCTTCAGGTAACGATGGGAATGGGATGCGGATCGCTAAGAGTCGGCCTCCACTGAGATCGATTGTAAGCATGCCTTTGGAGCGCGAAAAAGGGGAGAGTTACAGATGCAGTAGGACGGTTGTGGAGGTGCTTAGGGAGTTGGATGCTGACATATTGGCATTGCAAGATGTGAAGGCGGTGGAAGAGAAAGGCATGAGACCGCTCTCGGATTTGGCAGATGCTTTGGGAATGAAGTACGTTTTTGCAGAGAGCTGGGCGCCGGAGTATGGAAATGCGGTCCTGTCGAGATGGCCCATCAAACGCTGGAAAGTCGAGAAGATTTTCGACCACACCGATTTCAGGTTAGCAGCTGTACACCACACTCAATAGTATTACACTATTATTAAACTGAAGCAAACCTTTTAGATTAATTTGTGTGTTCTTGCTCTGCTCCTCATTTCATAAACATGCTTTTGATTGATGACACTAGTAGAGTAGATGGAGTCAAGGCGATTGACTGCTTTTGTTTTCCTTTTAAACAATGAATTCAGCAAAAACTAAGCTAAAAACTTAACTTATGGTCAACGTTAGATCTGTGATAGAAGGCAGAGGTCGAAGATTATTGAGAAGGAGTCCCACGTTGTCTAATTTAGAGAATGATTATGGGTTTATAGGTAAGGAATACATCTCCATTGGTATGAGGCGGCCTTTTGGGGAATCCCAAAGCAAAGCCATGAGAACTTATGCTCAAAGTAGACAATATCATACGATTGTGGAGAGTCGTTATTACCAACTAGAAACTTATGAAAAGTAGTAAATAGTTGATAAACTCTGTGAGAATGATAGAATTGGTTATTGGGTTGGGCGGTGGCAGGAATGTGTTAAAAGCGACCATTGATGTGGGAGAAGTAGGAGAGGTAAATGTGCAGTGTACCCATTTGGATCATCTGGACGAGAATTGGAGGATGAAACAGATAAAATCCATAATCCGATCGACCAACGACGAACCCCATATCTTATTAGGAGGCCTTAATTCTCTGGATCCCACGGATTACTCGCAGCAACGGTGGACGGACATCGTGAAGGTATCAATGTTTATTTTGAACTTTGTTTAGCTTAGTTGAGTTTTGTTTATGGCATGCATCCCATGTTGGTTGGTTGGTTGGTTGATTGATTGATTCTTCAGTATTACGAAGAGATAGGAAAGCCAACTCCGGAAGCTAAAGTGATTAAGTTCTTAAAGAGCGGTATGCACTATAGGGATGCAAAGGAGTTTGGAGGAGAATGCGAATCAGTGGTGATGATCGCCAAAGGCCAAAGTATGAAACTGAGTGATGAATATGAAAAAAAAAGATAGGACAATGAGAATGAAAGGTTTTTACTAATGGAATGTATGGCATTGGTTGGCAATGGCAGGTGTTCAAGGGACGTGCAAGTACGGGACACGAGTCGACTACATATTGGCCTCTCCCGATGCAGATTACGAGTTTGTTAAAGGATCCTACTCTGTCCTTTCCTCAAAAGGAACCTCCGATCATCACATTGTCAAGGTTGATTTCCTCAAACCTCCTCATTCTCGAGGTTGATTTCTTCAAACCTCCTCCTCGGCCTCGGCCTCGGCCCCAAACCCGTTCGCATTCCCTTTCCCCTTGGAAGAGATGGACACGAAACAACGATCAACACGCCCACACCCTTTGTCTCCTTTAATTTCTCAAACCTTTTCACTTATATTTACACACTCATTTGTATTACATTTAGGAATGGAACTCATTCCTTTTGTTCTATGCCGTATGTAACCAAAGAACCCATGTACACCTTAATTTCAAACAAAAGTATTAGACACAAAAACTTCAAAACTAAAATGAGATTTGAAGGAAGCTGATGTATTTACCAACACACAAGCTACAGTTACTACTGGAACTGCCTGGATTTCTAGTTAAAGTTCTAATGAAAGCTCTAAGTATATCGTTGTCATCAACAATCTACAGAATTACAGAAGAATAGTGTTG mRNA sequence AGATGAAAACGAGTGGCCCCAAAAGTGGAAGTCAACCATTTGTAGGAGTCACCGAGTTGGACTAAAATTGGGGTTTTGTTATTAATTTCTGCACTCACACCAATGCCATACAGGTAAGCCCAGTTGAATGTCACTCTGCAACTCTCACACTTTCCTACTCCTTTTCTAAAATGCTCAACTTCCTCAACCGGAGCCTCCGCCGCCTCTGCTCCCGTCTCCGATGGCCTCGTGCCCGGCGGGTCAGACCTAGGGTAGTCGTCATCAAGAAATTTGGAAAAACCACCTCCAAACCTCACGCCGATCCCCACAATACCCTCGACTCCTTCGTTAATGCCTCCTTGGCGTCGCCTGTGCATCCCAAACCTCAATTTCACGGTCGTAATACTCAGAGACCTGTGCGGATTGCGACATTTAATGCCGCCTCCTTCTCCATGGCACCTGCTGTTCCGTACGCTGAAAAATCTAATTCCTCTGCCAAATTCCGACGGAGTTTGGATTCCAGTTTACGGACAAAATCCGTAAATGATCGCCCCAAAAGCATTTTGAAACAGTCTCCACTGCATCCGAATTCCGTGAATGGAGTTGTTGCTAATCATAACCTCCACACCCAACCGAAGTTCGTGAAACCCAAGCCGCGGGTTTCGATCAACCTGCCTGATAACGAGATATCCTTACTCAGAAATCGACAGGCGAGCTTTTCTGAGTACGAAATGGAGAAGGAGGATCCGTCCTCTTCAGGTAACGATGGGAATGGGATGCGGATCGCTAAGAGTCGGCCTCCACTGAGATCGATTGTAAGCATGCCTTTGGAGCGCGAAAAAGGGGAGAGTTACAGATGCAGTAGGACGGTTGTGGAGGTGCTTAGGGAGTTGGATGCTGACATATTGGCATTGCAAGATGTGAAGGCGGTGGAAGAGAAAGGCATGAGACCGCTCTCGGATTTGGCAGATGCTTTGGGAATGAAGTACGTTTTTGCAGAGAGCTGGGCGCCGGAGTATGGAAATGCGGTCCTGTCGAGATGGCCCATCAAACGCTGGAAAGTCGAGAAGATTTTCGACCACACCGATTTCAGGAATGTGTTAAAAGCGACCATTGATGTGGGAGAAGTAGGAGAGGTAAATGTGCAGTGTACCCATTTGGATCATCTGGACGAGAATTGGAGGATGAAACAGATAAAATCCATAATCCGATCGACCAACGACGAACCCCATATCTTATTAGGAGGCCTTAATTCTCTGGATCCCACGGATTACTCGCAGCAACGGTGGACGGACATCGTGAAGTATTACGAAGAGATAGGAAAGCCAACTCCGGAAGCTAAAGTGATTAAGTTCTTAAAGAGCGGTATGCACTATAGGGATGCAAAGGAGTTTGGAGGAGAATGCGAATCAGTGGTGATGATCGCCAAAGGCCAAAGTGTTCAAGGGACGTGCAAGTACGGGACACGAGTCGACTACATATTGGCCTCTCCCGATGCAGATTACGAGTTTGTTAAAGGATCCTACTCTGTCCTTTCCTCAAAAGGAACCTCCGATCATCACATTGTCAAGGTTGATTTCCTCAAACCTCCTCATTCTCGAGGTTGATTTCTTCAAACCTCCTCCTCGGCCTCGGCCTCGGCCCCAAACCCGTTCGCATTCCCTTTCCCCTTGGAAGAGATGGACACGAAACAACGATCAACACGCCCACACCCTTTGTCTCCTTTAATTTCTCAAACCTTTTCACTTATATTTACACACTCATTTGTATTACATTTAGGAATGGAACTCATTCCTTTTGTTCTATGCCGTATGTAACCAAAGAACCCATGTACACCTTAATTTCAAACAAAAGTATTAGACACAAAAACTTCAAAACTAAAATGAGATTTGAAGGAAGCTGATGTATTTACCAACACACAAGCTACAGTTACTACTGGAACTGCCTGGATTTCTAGTTAAAGTTCTAATGAAAGCTCTAAGTATATCGTTGTCATCAACAATCTACAGAATTACAGAAGAATAGTGTTG Coding sequence (CDS) ATGCTCAACTTCCTCAACCGGAGCCTCCGCCGCCTCTGCTCCCGTCTCCGATGGCCTCGTGCCCGGCGGGTCAGACCTAGGGTAGTCGTCATCAAGAAATTTGGAAAAACCACCTCCAAACCTCACGCCGATCCCCACAATACCCTCGACTCCTTCGTTAATGCCTCCTTGGCGTCGCCTGTGCATCCCAAACCTCAATTTCACGGTCGTAATACTCAGAGACCTGTGCGGATTGCGACATTTAATGCCGCCTCCTTCTCCATGGCACCTGCTGTTCCGTACGCTGAAAAATCTAATTCCTCTGCCAAATTCCGACGGAGTTTGGATTCCAGTTTACGGACAAAATCCGTAAATGATCGCCCCAAAAGCATTTTGAAACAGTCTCCACTGCATCCGAATTCCGTGAATGGAGTTGTTGCTAATCATAACCTCCACACCCAACCGAAGTTCGTGAAACCCAAGCCGCGGGTTTCGATCAACCTGCCTGATAACGAGATATCCTTACTCAGAAATCGACAGGCGAGCTTTTCTGAGTACGAAATGGAGAAGGAGGATCCGTCCTCTTCAGGTAACGATGGGAATGGGATGCGGATCGCTAAGAGTCGGCCTCCACTGAGATCGATTGTAAGCATGCCTTTGGAGCGCGAAAAAGGGGAGAGTTACAGATGCAGTAGGACGGTTGTGGAGGTGCTTAGGGAGTTGGATGCTGACATATTGGCATTGCAAGATGTGAAGGCGGTGGAAGAGAAAGGCATGAGACCGCTCTCGGATTTGGCAGATGCTTTGGGAATGAAGTACGTTTTTGCAGAGAGCTGGGCGCCGGAGTATGGAAATGCGGTCCTGTCGAGATGGCCCATCAAACGCTGGAAAGTCGAGAAGATTTTCGACCACACCGATTTCAGGAATGTGTTAAAAGCGACCATTGATGTGGGAGAAGTAGGAGAGGTAAATGTGCAGTGTACCCATTTGGATCATCTGGACGAGAATTGGAGGATGAAACAGATAAAATCCATAATCCGATCGACCAACGACGAACCCCATATCTTATTAGGAGGCCTTAATTCTCTGGATCCCACGGATTACTCGCAGCAACGGTGGACGGACATCGTGAAGTATTACGAAGAGATAGGAAAGCCAACTCCGGAAGCTAAAGTGATTAAGTTCTTAAAGAGCGGTATGCACTATAGGGATGCAAAGGAGTTTGGAGGAGAATGCGAATCAGTGGTGATGATCGCCAAAGGCCAAAGTGTTCAAGGGACGTGCAAGTACGGGACACGAGTCGACTACATATTGGCCTCTCCCGATGCAGATTACGAGTTTGTTAAAGGATCCTACTCTGTCCTTTCCTCAAAAGGAACCTCCGATCATCACATTGTCAAGGTTGATTTCCTCAAACCTCCTCATTCTCGAGGTTGA Protein sequence MLNFLNRSLRRLCSRLRWPRARRVRPRVVVIKKFGKTTSKPHADPHNTLDSFVNASLASPVHPKPQFHGRNTQRPVRIATFNAASFSMAPAVPYAEKSNSSAKFRRSLDSSLRTKSVNDRPKSILKQSPLHPNSVNGVVANHNLHTQPKFVKPKPRVSINLPDNEISLLRNRQASFSEYEMEKEDPSSSGNDGNGMRIAKSRPPLRSIVSMPLEREKGESYRCSRTVVEVLRELDADILALQDVKAVEEKGMRPLSDLADALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDHTDFRNVLKATIDVGEVGEVNVQCTHLDHLDENWRMKQIKSIIRSTNDEPHILLGGLNSLDPTDYSQQRWTDIVKYYEEIGKPTPEAKVIKFLKSGMHYRDAKEFGGECESVVMIAKGQSVQGTCKYGTRVDYILASPDADYEFVKGSYSVLSSKGTSDHHIVKVDFLKPPHSRG
Homology
BLAST of CmoCh19G000050 vs. ExPASy TrEMBL
Match: A0A6J1HGD4 (uncharacterized protein LOC111464053 OS=Cucurbita moschata OX=3662 GN=LOC111464053 PE=4 SV=1) HSP 1 Score: 948.7 bits (2451), Expect = 9.0e-273 Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 0
Query: 1 MLNFLNRSLRRLCSRLRWPRARRVRPRVVVIKKFGKTTSKPHADPHNTLDSFVNASLASP 60
MLNFLNRSLRRLCSRLRWPRARRVRPRVVVIKKFGKTTSKPHADPHNTLDSFVNASLASP
Sbjct: 1 MLNFLNRSLRRLCSRLRWPRARRVRPRVVVIKKFGKTTSKPHADPHNTLDSFVNASLASP 60
Query: 61 VHPKPQFHGRNTQRPVRIATFNAASFSMAPAVPYAEKSNSSAKFRRSLDSSLRTKSVNDR 120
VHPKPQFHGRNTQRPVRIATFNAASFSMAPAVPYAEKSNSSAKFRRSLDSSLRTKSVNDR
Sbjct: 61 VHPKPQFHGRNTQRPVRIATFNAASFSMAPAVPYAEKSNSSAKFRRSLDSSLRTKSVNDR 120
Query: 121 PKSILKQSPLHPNSVNGVVANHNLHTQPKFVKPKPRVSINLPDNEISLLRNRQASFSEYE 180
PKSILKQSPLHPNSVNGVVANHNLHTQPKFVKPKPRVSINLPDNEISLLRNRQASFSEYE
Sbjct: 121 PKSILKQSPLHPNSVNGVVANHNLHTQPKFVKPKPRVSINLPDNEISLLRNRQASFSEYE 180
Query: 181 MEKEDPSSSGNDGNGMRIAKSRPPLRSIVSMPLEREKGESYRCSRTVVEVLRELDADILA 240
MEKEDPSSSGNDGNGMRIAKSRPPLRSIVSMPLEREKGESYRCSRTVVEVLRELDADILA
Sbjct: 181 MEKEDPSSSGNDGNGMRIAKSRPPLRSIVSMPLEREKGESYRCSRTVVEVLRELDADILA 240
Query: 241 LQDVKAVEEKGMRPLSDLADALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDHTDF 300
LQDVKAVEEKGMRPLSDLADALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDHTDF
Sbjct: 241 LQDVKAVEEKGMRPLSDLADALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDHTDF 300
Query: 301 RNVLKATIDVGEVGEVNVQCTHLDHLDENWRMKQIKSIIRSTNDEPHILLGGLNSLDPTD 360
RNVLKATIDVGEVGEVNVQCTHLDHLDENWRMKQIKSIIRSTNDEPHILLGGLNSLDPTD
Sbjct: 301 RNVLKATIDVGEVGEVNVQCTHLDHLDENWRMKQIKSIIRSTNDEPHILLGGLNSLDPTD 360
Query: 361 YSQQRWTDIVKYYEEIGKPTPEAKVIKFLKSGMHYRDAKEFGGECESVVMIAKGQSVQGT 420
YSQQRWTDIVKYYEEIGKPTPEAKVIKFLKSGMHYRDAKEFGGECESVVMIAKGQSVQGT
Sbjct: 361 YSQQRWTDIVKYYEEIGKPTPEAKVIKFLKSGMHYRDAKEFGGECESVVMIAKGQSVQGT 420
Query: 421 CKYGTRVDYILASPDADYEFVKGSYSVLSSKGTSDHHIVKVDFLKPPHSRG 472
CKYGTRVDYILASPDADYEFVKGSYSVLSSKGTSDHHIVKVDFLKPPHSRG
Sbjct: 421 CKYGTRVDYILASPDADYEFVKGSYSVLSSKGTSDHHIVKVDFLKPPHSRG 471
BLAST of CmoCh19G000050 vs. ExPASy TrEMBL
Match: A0A6J1HR38 (uncharacterized protein LOC111467014 OS=Cucurbita maxima OX=3661 GN=LOC111467014 PE=4 SV=1) HSP 1 Score: 921.4 bits (2380), Expect = 1.5e-264 Identity = 457/471 (97.03%), Postives = 463/471 (98.30%), Query Frame = 0
Query: 1 MLNFLNRSLRRLCSRLRWPRARRVRPRVVVIKKFGKTTSKPHADPHNTLDSFVNASLASP 60
ML FLNRSLRRLC+RLRWPRARRVRPRVVVIKKFGKTTSKPHADPHNTLDSFVN SLASP
Sbjct: 23 MLKFLNRSLRRLCTRLRWPRARRVRPRVVVIKKFGKTTSKPHADPHNTLDSFVNGSLASP 82
Query: 61 VHPKPQFHGRNTQRPVRIATFNAASFSMAPAVPYAEKSNSSAKFRRSLDSSLRTKSVNDR 120
VHPKPQF G N RPVRIATFNAASFSMAPAVPYAEKSNSSAKFRRSLDSSLRTKSVNDR
Sbjct: 83 VHPKPQFCGLNAHRPVRIATFNAASFSMAPAVPYAEKSNSSAKFRRSLDSSLRTKSVNDR 142
Query: 121 PKSILKQSPLHPNSVNGVVANHNLHTQPKFVKPKPRVSINLPDNEISLLRNRQASFSEYE 180
PKSILKQSPLHPN+VNGVVANHNLHTQPKFVKPKPRVSINLPDNEISLLRNRQASFSEYE
Sbjct: 143 PKSILKQSPLHPNTVNGVVANHNLHTQPKFVKPKPRVSINLPDNEISLLRNRQASFSEYE 202
Query: 181 MEKEDPSSSGNDGNGMRIAKSRPPLRSIVSMPLEREKGESYRCSRTVVEVLRELDADILA 240
MEKEDPSSSGNDGNGMRIAKSRPPLRSIVSMP EREKGESYRC+RTVVEVLRELDADILA
Sbjct: 203 MEKEDPSSSGNDGNGMRIAKSRPPLRSIVSMPSEREKGESYRCNRTVVEVLRELDADILA 262
Query: 241 LQDVKAVEEKGMRPLSDLADALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDHTDF 300
LQDVKAVEEKGMRPLSDLADALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDHTDF
Sbjct: 263 LQDVKAVEEKGMRPLSDLADALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDHTDF 322
Query: 301 RNVLKATIDVGEVGEVNVQCTHLDHLDENWRMKQIKSIIRSTNDEPHILLGGLNSLDPTD 360
RNVLKATIDVGEVGEVNVQCTHLDHLDENWRMKQIKSIIRSTNDEPHILLGGLNSLDPTD
Sbjct: 323 RNVLKATIDVGEVGEVNVQCTHLDHLDENWRMKQIKSIIRSTNDEPHILLGGLNSLDPTD 382
Query: 361 YSQQRWTDIVKYYEEIGKPTPEAKVIKFLKSGMHYRDAKEFGGECESVVMIAKGQSVQGT 420
YSQQRWTDIVKYYEEIGKPTPEAKVIKFLKS MHYRDAKEFGGECESVVMIAKGQSVQGT
Sbjct: 383 YSQQRWTDIVKYYEEIGKPTPEAKVIKFLKSSMHYRDAKEFGGECESVVMIAKGQSVQGT 442
Query: 421 CKYGTRVDYILASPDADYEFVKGSYSVLSSKGTSDHHIVKVDFLKPPHSRG 472
CKYGTRVDYILASPDADY+FV+GSYSVLSSKGTSDHHIVKVDFLKPPHS+G
Sbjct: 443 CKYGTRVDYILASPDADYKFVEGSYSVLSSKGTSDHHIVKVDFLKPPHSQG 493
BLAST of CmoCh19G000050 vs. ExPASy TrEMBL
Match: A0A5A7UUR9 (DNAse I-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00650 PE=4 SV=1) HSP 1 Score: 743.8 bits (1919), Expect = 4.4e-211 Identity = 393/469 (83.80%), Postives = 411/469 (87.63%), Query Frame = 0
Query: 1 MLNFLNRSLRRLCSRLRWPRARRVRPRVVVIKKFGKTTS-KPHADPHNTLDSFVNASLAS 60
ML FLNR LRRLCSRLRWPR RR+RPRV+VIKKFGKTTS + ++ P T+DSFVNAS S
Sbjct: 1 MLKFLNRKLRRLCSRLRWPRRRRIRPRVLVIKKFGKTTSYETNSHPEKTIDSFVNASSPS 60
Query: 61 PVHPKPQFHGRNTQRPVRIATFNAASFSMAPAVPYAEKSNSSAKFRRSLDSSLRTKSVND 120
VHP QF+ NTQRP+RIATFNAASFSMAPAVP EKSNSSAKFRRSLDS+ RTKSVND
Sbjct: 61 AVHPNSQFYLLNTQRPIRIATFNAASFSMAPAVP--EKSNSSAKFRRSLDSNSRTKSVND 120
Query: 121 RPKSILKQSPLHPNSVNGVVANHNLHTQPKFVKPKPRVSINLPDNEISLLRNRQASFSEY 180
RPKSILKQSPLH NS+N VA K KPRVSINLPDNEISLLRNRQA SEY
Sbjct: 121 RPKSILKQSPLHTNSINSGVA-----------KTKPRVSINLPDNEISLLRNRQA--SEY 180
Query: 181 EMEKEDPSSSGNDGNGMRIAKSRPPLRSIVSMPLEREKGESYRCSRTVVEVLRELDADIL 240
EME E+ SSSGND GM IAKS PLR VSMP ER SYRCSRTVVEVLR+LDADIL
Sbjct: 181 EME-ENLSSSGNDRRGMGIAKSGTPLRWTVSMPSER---GSYRCSRTVVEVLRDLDADIL 240
Query: 241 ALQDVKAVEEKGMRPLSDLADALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDHTD 300
ALQDVKA EEK MRPLSDLA+ALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFD TD
Sbjct: 241 ALQDVKAEEEKQMRPLSDLAEALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDDTD 300
Query: 301 FRNVLKATIDVGEVGEVNVQCTHLDHLDENWRMKQIKSIIRSTNDEPHILLGGLNSLDPT 360
FRNVLKATIDV EVGEVNVQCTHLDHLDENWRMKQIKSIIRS N+EPHILLGGLNSLDPT
Sbjct: 301 FRNVLKATIDVEEVGEVNVQCTHLDHLDENWRMKQIKSIIRSNNNEPHILLGGLNSLDPT 360
Query: 361 DYSQQRWTDIVKYYEEIGKPTPEAKVIKFLKSGMHYRDAKEFGGECESVVMIAKGQSVQG 420
DYSQQRWTDIVKYYEEIGKPTPEAKV KFLKS M YRDAKE+GGECESVVMIAKGQSVQG
Sbjct: 361 DYSQQRWTDIVKYYEEIGKPTPEAKVTKFLKSNMQYRDAKEYGGECESVVMIAKGQSVQG 420
Query: 421 TCKYGTRVDYILASPDADYEFVKGSYSVLSSKGTSDHHIVKVDFLKPPH 469
TCKYGTRVDYILASPDA+YEFV+GSYSV+SSKGTSDHHIVKVDFLK PH
Sbjct: 421 TCKYGTRVDYILASPDANYEFVQGSYSVISSKGTSDHHIVKVDFLKLPH 450
BLAST of CmoCh19G000050 vs. ExPASy TrEMBL
Match: A0A1S3BLG5 (uncharacterized protein LOC103491341 OS=Cucumis melo OX=3656 GN=LOC103491341 PE=4 SV=1) HSP 1 Score: 743.8 bits (1919), Expect = 4.4e-211 Identity = 393/469 (83.80%), Postives = 411/469 (87.63%), Query Frame = 0
Query: 1 MLNFLNRSLRRLCSRLRWPRARRVRPRVVVIKKFGKTTS-KPHADPHNTLDSFVNASLAS 60
ML FLNR LRRLCSRLRWPR RR+RPRV+VIKKFGKTTS + ++ P T+DSFVNAS S
Sbjct: 1 MLKFLNRKLRRLCSRLRWPRRRRIRPRVLVIKKFGKTTSYETNSHPEKTIDSFVNASSPS 60
Query: 61 PVHPKPQFHGRNTQRPVRIATFNAASFSMAPAVPYAEKSNSSAKFRRSLDSSLRTKSVND 120
VHP QF+ NTQRP+RIATFNAASFSMAPAVP EKSNSSAKFRRSLDS+ RTKSVND
Sbjct: 61 AVHPNSQFYLLNTQRPIRIATFNAASFSMAPAVP--EKSNSSAKFRRSLDSNSRTKSVND 120
Query: 121 RPKSILKQSPLHPNSVNGVVANHNLHTQPKFVKPKPRVSINLPDNEISLLRNRQASFSEY 180
RPKSILKQSPLH NS+N VA K KPRVSINLPDNEISLLRNRQA SEY
Sbjct: 121 RPKSILKQSPLHTNSINSGVA-----------KTKPRVSINLPDNEISLLRNRQA--SEY 180
Query: 181 EMEKEDPSSSGNDGNGMRIAKSRPPLRSIVSMPLEREKGESYRCSRTVVEVLRELDADIL 240
EME E+ SSSGND GM IAKS PLR VSMP ER SYRCSRTVVEVLR+LDADIL
Sbjct: 181 EME-ENLSSSGNDRRGMGIAKSGTPLRWTVSMPSER---GSYRCSRTVVEVLRDLDADIL 240
Query: 241 ALQDVKAVEEKGMRPLSDLADALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDHTD 300
ALQDVKA EEK MRPLSDLA+ALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFD TD
Sbjct: 241 ALQDVKAEEEKQMRPLSDLAEALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDDTD 300
Query: 301 FRNVLKATIDVGEVGEVNVQCTHLDHLDENWRMKQIKSIIRSTNDEPHILLGGLNSLDPT 360
FRNVLKATIDV EVGEVNVQCTHLDHLDENWRMKQIKSIIRS N+EPHILLGGLNSLDPT
Sbjct: 301 FRNVLKATIDVEEVGEVNVQCTHLDHLDENWRMKQIKSIIRSNNNEPHILLGGLNSLDPT 360
Query: 361 DYSQQRWTDIVKYYEEIGKPTPEAKVIKFLKSGMHYRDAKEFGGECESVVMIAKGQSVQG 420
DYSQQRWTDIVKYYEEIGKPTPEAKV KFLKS M YRDAKE+GGECESVVMIAKGQSVQG
Sbjct: 361 DYSQQRWTDIVKYYEEIGKPTPEAKVTKFLKSNMQYRDAKEYGGECESVVMIAKGQSVQG 420
Query: 421 TCKYGTRVDYILASPDADYEFVKGSYSVLSSKGTSDHHIVKVDFLKPPH 469
TCKYGTRVDYILASPDA+YEFV+GSYSV+SSKGTSDHHIVKVDFLK PH
Sbjct: 421 TCKYGTRVDYILASPDANYEFVQGSYSVISSKGTSDHHIVKVDFLKLPH 450
BLAST of CmoCh19G000050 vs. ExPASy TrEMBL
Match: A0A0A0KDU0 (Endo/exonuclease/phosphatase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G409370 PE=4 SV=1) HSP 1 Score: 739.2 bits (1907), Expect = 1.1e-209 Identity = 390/469 (83.16%), Postives = 408/469 (86.99%), Query Frame = 0
Query: 1 MLNFLNRSLRRLCSRLRWPRARRVRPRVVVIKKFGKTTSKPHADPHNTLDSFVN-ASLAS 60
ML FLNR LRRLCSRLRWPR R +RPRV++IKKFGKTTS+ + P T+DSFVN AS S
Sbjct: 1 MLKFLNRKLRRLCSRLRWPRRRTIRPRVLIIKKFGKTTSQTTSHPDKTIDSFVNIASSPS 60
Query: 61 PVHPKPQFHGRNTQRPVRIATFNAASFSMAPAVPYAEKSNSSAKFRRSLDSSLRTKSVND 120
VHP QFH TQRP+RIATFNAASFSMAPAVP EKSNSSAKFRRSLDS+ RTKSVND
Sbjct: 61 AVHPNSQFHLLTTQRPIRIATFNAASFSMAPAVP--EKSNSSAKFRRSLDSNSRTKSVND 120
Query: 121 RPKSILKQSPLHPNSVNGVVANHNLHTQPKFVKPKPRVSINLPDNEISLLRNRQASFSEY 180
RPKSILKQSPLH NS+N VA + KPRVSINLPDNEISLLRNRQA SEY
Sbjct: 121 RPKSILKQSPLHTNSINNGVA-----------RTKPRVSINLPDNEISLLRNRQA--SEY 180
Query: 181 EMEKEDPSSSGNDGNGMRIAKSRPPLRSIVSMPLEREKGESYRCSRTVVEVLRELDADIL 240
EME E+ SSSGND GMRIAKS PLR VSMP ER +YRCSRTVVEVLRELDADIL
Sbjct: 181 EME-ENLSSSGNDRKGMRIAKSGTPLRWTVSMPSER---GTYRCSRTVVEVLRELDADIL 240
Query: 241 ALQDVKAVEEKGMRPLSDLADALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDHTD 300
ALQDVKA EEK MRPLSDLA+ALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFD TD
Sbjct: 241 ALQDVKAEEEKQMRPLSDLAEALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDDTD 300
Query: 301 FRNVLKATIDVGEVGEVNVQCTHLDHLDENWRMKQIKSIIRSTNDEPHILLGGLNSLDPT 360
FRNVLKATIDV EVGEVNVQCTHLDHLDENWRMKQIKSIIRS N+EPHILLGGLNSLDPT
Sbjct: 301 FRNVLKATIDVEEVGEVNVQCTHLDHLDENWRMKQIKSIIRSNNNEPHILLGGLNSLDPT 360
Query: 361 DYSQQRWTDIVKYYEEIGKPTPEAKVIKFLKSGMHYRDAKEFGGECESVVMIAKGQSVQG 420
DYSQQRW DIVKYYEEIGKPTPEAKV KFLKS M YRDAKEFGGECESVVMIAKGQSVQG
Sbjct: 361 DYSQQRWMDIVKYYEEIGKPTPEAKVTKFLKSNMQYRDAKEFGGECESVVMIAKGQSVQG 420
Query: 421 TCKYGTRVDYILASPDADYEFVKGSYSVLSSKGTSDHHIVKVDFLKPPH 469
TCKYGTRVDYI+ASPDA+YEFV+GSYSV+SSKGTSDHHIVKVDFLK PH
Sbjct: 421 TCKYGTRVDYIMASPDANYEFVQGSYSVISSKGTSDHHIVKVDFLKLPH 450
BLAST of CmoCh19G000050 vs. TAIR 10
Match: AT3G21530.1 (DNAse I-like superfamily protein ) HSP 1 Score: 432.2 bits (1110), Expect = 5.4e-121 Identity = 258/477 (54.09%), Postives = 313/477 (65.62%), Query Frame = 0
Query: 1 MLNFLNRSLRRLCSRLRWPRARRVRPRVVVIKKFGKT--TSKPHADPHNTLDSFVNASLA 60
ML R L L SRLRW +RVR RV+V ++F K ++ P + + S +S
Sbjct: 1 MLCVFRRKLGCLFSRLRWVIKKRVRARVIV-RRFRKARWRARRKESPESEVSSIHLSS-- 60
Query: 61 SPVHPKPQFHGRNTQRPVRIATFNAASFSMAPAVPYAEKSNSSAKFRRSLDSSLRTKSVN 120
N+ R +R+ATFN A FS+AP V E++ F LDSS T
Sbjct: 61 ------------NSGRHIRVATFNVAMFSLAPVVQTMEET----AFLGHLDSSNIT---C 120
Query: 121 DRPKSILKQSPLHPNSVNGVVANHNLHTQPKFVKPKPRVSINLPDNEISLLRNRQASFSE 180
PK ILKQSPLH ++V KP+V INLPDNEISL + S+S
Sbjct: 121 PSPKGILKQSPLHSSAVR-----------------KPKVCINLPDNEISLAQ----SYSF 180
Query: 181 YEMEKEDPSSSGNDGNGMRIAKSRPPLRSIVSMP---LEREKGESYRCSRTVVEVLRELD 240
M + D NDG R + S +RS V +P ++E Y R++ E+LRELD
Sbjct: 181 LSMVEND-----NDGKENRGSLS---MRSPVCLPSCWWDQESFNGYSSRRSIAELLRELD 240
Query: 241 ADILALQDVKAVEEKGMRPLSDLADALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIF 300
ADILALQDVKA EE M+PLSDLA ALGMKYVFAESWAPEYGNA+LS+WPIK+W+V++I
Sbjct: 241 ADILALQDVKAEEETLMKPLSDLASALGMKYVFAESWAPEYGNAILSKWPIKKWRVQRIA 300
Query: 301 DHTDFRNVLKATIDVGEVGEVNVQCTHLDHLDENWRMKQIKSIIRSTNDEPHILLGGLNS 360
D DFRNVLK T+++ G+VNV CT LDHLDENWRMKQI +I R ++ PHILLGGLNS
Sbjct: 301 DVDDFRNVLKVTVEIPWAGDVNVYCTQLDHLDENWRMKQIDAITRG-DESPHILLGGLNS 360
Query: 361 LDPTDYSQQRWTDIVKYYEEIGKPTPEAKVIKFLKSGMHYRDAKEFGGECESVVMIAKGQ 420
LD +DYS RW IVKYYE+ GKPTP +V++FLK G Y D+KEF GECE VV+IAKGQ
Sbjct: 361 LDGSDYSIARWNHIVKYYEDSGKPTPRVEVMRFLK-GKGYLDSKEFAGECEPVVIIAKGQ 420
Query: 421 SVQGTCKYGTRVDYILASPDADYEFVKGSYSVLSSKGTSDHHIVKVDF-LKPPHSRG 472
+VQGTCKYGTRVDYILASP++ YEFV GSYSV+SSKGTSDHHIVKVD + SRG
Sbjct: 421 NVQGTCKYGTRVDYILASPESPYEFVPGSYSVVSSKGTSDHHIVKVDLVITKERSRG 424
BLAST of CmoCh19G000050 vs. TAIR 10
Match: AT2G48030.1 (DNAse I-like superfamily protein ) HSP 1 Score: 427.2 bits (1097), Expect = 1.7e-119 Identity = 263/467 (56.32%), Postives = 301/467 (64.45%), Query Frame = 0
Query: 1 MLNFLNRSLRRLCSRLRWPRARRVRPRVVVIKKFGKTTSKPHADPHNTLDSFVNASLASP 60
MLN + LRR RLR PR + R+ V S P H S A+
Sbjct: 1 MLNLI-AFLRR---RLRRPR----KARISVNHHHLSVDSSPETHHHQN-----GFSSAAA 60
Query: 61 VHPKPQFHGRNTQRPVRIATFNAASFSMAPAVPYAEKSNSSAKFRRSLDSSLRTKSVNDR 120
+HP P + + +ATFNAA FSMAPAVP SN F R+KS DR
Sbjct: 61 IHPNP-------DKTITVATFNAAMFSMAPAVP----SNKGLPF--------RSKSTVDR 120
Query: 121 PKSILKQSPLHPNSVNGVVANHNLHTQPKFVKPKP-RVSINLPDNEISLLRNRQASFSEY 180
PKSILK P++ H+ Q +F K +P RVSINLPDNEIS RQ SF
Sbjct: 121 PKSILK--PMNA----AASPTHDSRKQQRFAKSRPRRVSINLPDNEIS----RQLSF--- 180
Query: 181 EMEKEDPSSSGNDGNGMRIAKSRPPLRSIVSMPLEREKGE-SYRCSRTVVEVLRELDADI 240
+EDP S PLR GE R +RT +EVL ELDAD+
Sbjct: 181 ---REDPQHS--------------PLR----------PGEIGLRSTRTALEVLSELDADV 240
Query: 241 LALQDVKAVEEKGMRPLSDLADALGMKYVFAESWAPEYGNAVLSRWPIKRWKVEKIFDHT 300
LALQDVKA E MRPLSDLA ALGM YVFAESWAPEYGNA+LS+WPIK V +IFDHT
Sbjct: 241 LALQDVKADEADQMRPLSDLAAALGMNYVFAESWAPEYGNAILSKWPIKSSNVLRIFDHT 300
Query: 301 DFRNVLKATIDVGEVGEVNVQCTHLDHLDENWRMKQIKSIIRSTNDEPHILLGGLNSLDP 360
DFRNVLKA+I+V GEV CTHLDHLDE WRMKQ+ +II+STN PHIL G LNSLD
Sbjct: 301 DFRNVLKASIEVPGSGEVEFHCTHLDHLDEKWRMKQVDAIIQSTN-VPHILAGALNSLDE 360
Query: 361 TDYSQQRWTDIVKYYEEIGKPTPEAKVIKFLKSGMHYRDAKEFGGECESVVMIAKGQSVQ 420
+DYS +RWTDIVKYYEE+GKP P+A+V++FLKS Y DAK+F GECESVV++AKGQSVQ
Sbjct: 361 SDYSPERWTDIVKYYEEMGKPIPKAQVMRFLKS-KEYTDAKDFAGECESVVVVAKGQSVQ 393
Query: 421 GTCKYGTRVDYILASPDADYEFVKGSYSVLSSKGTSDHHIVKVDFLK 466
GTCKYGTRVDYILAS D+ Y FV GSYSVLSSKGTSDHHIVKVD +K
Sbjct: 421 GTCKYGTRVDYILASSDSPYRFVPGSYSVLSSKGTSDHHIVKVDVVK 393
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1HGD4 | 9.0e-273 | 100.00 | uncharacterized protein LOC111464053 OS=Cucurbita moschata OX=3662 GN=LOC1114640... | [more] |
| A0A6J1HR38 | 1.5e-264 | 97.03 | uncharacterized protein LOC111467014 OS=Cucurbita maxima OX=3661 GN=LOC111467014... | [more] |
| A0A5A7UUR9 | 4.4e-211 | 83.80 | DNAse I-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
| A0A1S3BLG5 | 4.4e-211 | 83.80 | uncharacterized protein LOC103491341 OS=Cucumis melo OX=3656 GN=LOC103491341 PE=... | [more] |
| A0A0A0KDU0 | 1.1e-209 | 83.16 | Endo/exonuclease/phosphatase domain-containing protein OS=Cucumis sativus OX=365... | [more] |
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR005135 | Endonuclease/exonuclease/phosphatase | PFAM | PF03372 | Exo_endo_phos | coord: 217..456
e-value: 4.4E-7
score: 29.8 |
| IPR036691 | Endonuclease/exonuclease/phosphatase superfamily | GENE3D | 3.60.10.10 | Endonuclease/exonuclease/phosphatase | coord: 211..465
e-value: 7.7E-31
score: 109.5 |
| IPR036691 | Endonuclease/exonuclease/phosphatase superfamily | SUPERFAMILY | 56219 | DNase I-like | coord: 225..464 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 178..201 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 97..134 |
| None | No IPR available | PANTHER | PTHR14859:SF10 | ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN | coord: 1..465 |
| None | No IPR available | PANTHER | PTHR14859 | CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR | coord: 1..465 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006506 |
GPI anchor biosynthetic process |
| cellular_component |
GO:0005783 |
endoplasmic reticulum |
| molecular_function |
GO:0003824 |
catalytic activity |
|
