CmoCh18G013790 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAATTTGCAAATAGTTCCGGCTCACACCCCATTTCATGTGGAGCCTCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCTCCCATCTCAAAGGTCTTATTTTGATTTTTAGTACAACACCCATCTATATATTCTCCAAAACCTCACACTAACAACATGCATGGTATGATTGCAGGGATATATTCAGTTAACGTAGATTACGAGGAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAAAACCAAGTGTTGAGCACTGTGAGAAGCAAGAGAAAAGCAGCTCGTTTTTGGAACAATGATGATGATGATAACAATAATAATGATCCACAAGCAGAAGAAGAAGGTCTAAACTCAAGAAGGCCTTCTTTTGGTGTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTTCACCACTACAAGATCATATTCCTTGCGTATCTTTGGGGCTCCTACTGTTTCCTAA ATGGCTAATTTGCAAATAGTTCCGGCTCACACCCCATTTCATGTGGAGCCTCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCTCCCATCTCAAAGTACAACACCCATCTATATATTCTCCAAAACCTCACACTAACAACATGCATGGTATGATTGCAGGGATATATTCAGTTAACGTAGATTACGAGGAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAAAACCAAGTGTTGAGCACTGTGAGAAGCAAGAGAAAAGCAGCTCGTTTTTGGAACAATGATGATGATGATAACAATAATAATGATCCACAAGCAGAAGAAGAAGGTCTAAACTCAAGAAGGCCTTCTTTTGGTGTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTTCACCACTACAAGATCATATTCCTTGCGTATCTTTGGGGCTCCTACTGTTTCCTAA ATGGCTAATTTGCAAATAGTTCCGGCTCACACCCCATTTCATGTGGAGCCTCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCTCCCATCTCAAAGTACAACACCCATCTATATATTCTCCAAAACCTCACACTAACAACATGCATGGTATGATTGCAGGGATATATTCAGTTAACGTAGATTACGAGGAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAAAACCAAGTGTTGAGCACTGTGAGAAGCAAGAGAAAAGCAGCTCGTTTTTGGAACAATGATGATGATGATAACAATAATAATGATCCACAAGCAGAAGAAGAAGGTCTAAACTCAAGAAGGCCTTCTTTTGGTGTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTTCACCACTACAAGATCATATTCCTTGCGTATCTTTGGGGCTCCTACTGTTTCCTAA MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS Homology
BLAST of CmoCh18G013790 vs. ExPASy TrEMBL
Match: A0A6J1G1N8 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Cucurbita moschata OX=3662 GN=LOC111449858 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 4.0e-71 Identity = 143/164 (87.20%), Postives = 143/164 (87.20%), Query Frame = 0
BLAST of CmoCh18G013790 vs. ExPASy TrEMBL
Match: A0A6J1HXU2 (heavy metal-associated isoprenylated plant protein 28 OS=Cucurbita maxima OX=3661 GN=LOC111467638 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 2.5e-68 Identity = 141/168 (83.93%), Postives = 142/168 (84.52%), Query Frame = 0
BLAST of CmoCh18G013790 vs. ExPASy TrEMBL
Match: A0A6J1CHX5 (uncharacterized protein LOC111011661 OS=Momordica charantia OX=3673 GN=LOC111011661 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 6.7e-34 Identity = 97/162 (59.88%), Postives = 107/162 (66.05%), Query Frame = 0
BLAST of CmoCh18G013790 vs. ExPASy TrEMBL
Match: M0ZIL1 (HMA domain-containing protein OS=Solanum tuberosum OX=4113 GN=102593133 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30 Identity = 83/154 (53.90%), Postives = 99/154 (64.29%), Query Frame = 0
BLAST of CmoCh18G013790 vs. ExPASy TrEMBL
Match: A0A3Q7FME6 (HMA domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101252962 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 2.0e-30 Identity = 83/160 (51.88%), Postives = 101/160 (63.12%), Query Frame = 0
BLAST of CmoCh18G013790 vs. TAIR 10
Match: AT4G27590.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 109.4 bits (272), Expect = 2.8e-24 Identity = 60/112 (53.57%), Postives = 71/112 (63.39%), Query Frame = 0
BLAST of CmoCh18G013790 vs. TAIR 10
Match: AT4G27590.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 109.4 bits (272), Expect = 2.8e-24 Identity = 60/112 (53.57%), Postives = 71/112 (63.39%), Query Frame = 0
BLAST of CmoCh18G013790 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 43.1 bits (100), Expect = 2.5e-04 Identity = 23/85 (27.06%), Postives = 40/85 (47.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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