CmoCh18G012950 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G012950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	PPPDE domain-containing protein
Location	Cmo_Chr18: 12464538 .. 12467451 (+)
RNA-Seq Expression	CmoCh18G012950
Synteny	CmoCh18G012950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGACGTGATGCTGCATATATACGACGTCACGAATAGCGGATCAGATAAGACCAACAATACAATTGTTAATATCAACAAGATCTTCAAGGATGGAATTGGTCTAGGCGGTATCTTCCATAGCGCTGTTCAGGTTTCCCGCTTTCTCCTCTGTTTTTCTCTTCGTGTTTACATGTTAATGTAGACTAAGTATTGATGTTTTCTCTTCGTATTTACATGTTAGTGTCTGCTTAATGATCCAGTAGTTTACTACGTGTTGCTCTGATTTAGGTTGACATTGGCTTTAATGGAGGTAAAGATTTGATACCTACTAAGGATGTAATGTGTTACAGTTCATCTAAGACTTTTGAGAAAGTATGTTAGTTCTATTTTTCGTGATAGAAATTAGAATTTGTTCTTATCCAGAAGATATTGGACTCTGGTTCACTCTAGATTGTGAGATATCGTTATATATTTTATCTCATAAGACGAGTGATATTGTTTGCAATAGATCGTGTAGTAATTTTCTACTTTTCACTCCCATTCTCGCCATGGATAATCATAGATTCTACTCTGACATTCTGGTTGCCAATGTGTTTCAGCAACATTTGGTAGTTTCCACGATATTTTGTTATTTCATCCGTTTAATTCCTACAGATTATGGCGTTCTTCCGTAAGAGTTTAGCTATCAAACAATGTGTAGATTTTGCAGTTAAGATTTCTTCATAGAAGCGATGAAATATTATTCTGAAATGAATTTGCAAAGGTGTATGAAGCTTCCACTATTGTACTCTTTGCCAATCACATTCTCCTAACGATATTTCCCTACACAGATTTATGTCTATTATGGTTGACGGGGTGTTAGACTAATTGTGCTATGCACTACAGGTTTATGGAGATGATGAATGGTCTTTTGGGTTTTGTGAGCAAGGAACTGGAGTTTTCAGTTGCCCTTCTGGACAGAATCCGATGTACACATATCGTGAAAGTATTAACCTTGGTAAAACAAACTGTTCAATTTTCAAGGTGAATCAGATTTTAAGGGAACTTAGTAGAGAGTGGCCTGGAAGTTCATATGACTTACTTTCAAGAAACTGTAACCACTTTTGTGATCAGTTCTGTGAAATGCTCAGTGTATCAAAACTTCCAGGTAATGTTATCTGTGTTCGTACTATCATGATCTATAATAATAAGATCTTTGTTCTGAGACAATTTCTGTGTGCATTTGAGGAATCAACTAGATTTATTATGCCTGATGTTTTATGGACATAATGAAAGAAACTCATTTACGTCTATTAGGTTTCCAAGTTCATGTCAGCATGTTAACCTTCTCTCATTTACGGTTTTAATGTAATATTTCTGTTTGTTGTTCTAGTTTTAAATGACATCACTTTTGATGATGAGTGGCTTTTATCGCTAAAAAAAGCTCATTAAGCATGTCGATAATAAGTACACTATTGGTCTTTAAGAGATATTGAGGCACGTGCTTTGGGCCTAGTCTGAGGTTCAACTCTGCAGAAAGGCAAACAGAACATTTTAAAACCCCATTAAAATAACAGGCTTCTATTTTACATCTTTGAGCGTGCACATAACTGAGTTTGGGGCTTATTTGAAACATAGATCTTATCAAATACATCTTCATTTTCTGGCTATTTTAGGTCTCTCTCTGTCTCTTTATTCTTGTTTTCTTTTTACTAAACTAACTGTTATACTCTCTTCGCTGTCATTCTTATTTTTGTCTTTGCATTTCATAAAAGTTGTTACTTTTTCCTAGACATTTCATCTCCTAATAATTGACTGATATTGGTTTCCTTTTTCCTTATTTCTCCATATCTTGTGTATAATCTTTGTTACAAGTGATGGAGGTGAGAAAACATTTAGAAGTTTAGACCTGAAAGCATCTAAGGATGTATAATTAAATATTTGAAGCTCTTGACTTTACATTGATGTCGTAGGATGAAATAATGGACATAGACTAGTAGAGACTATTTTCTTTGAAATGGAGTTATTATTTTGGCAAATACTTTAACAAGTGGATGTTGATTATTTTTTGGGAGAAGAAGTCTGATGATGCTTATCCTGTTGTAGGTTGGGTTAATCGGTTTGCCAACGCTGGTGATGCTGCATTGGAAGTAGCTGGAAACACAGCCGTTCGTGTAAGATTTACGCTTCATCATTTATTGCATAACATTTTACATGTCGAAATGACTCTTTCTGGAACGAAGTACTTTTATGACATCTATATTTTAAGGGGAATTTTACCACTACTTACAATTGCTCAGCCCTTTGCATCTAGGCTTATTTTTGTTACAAATCTTTCTTTTCTGGAAAGGCAGTACTAATCTTTGTTGCTATTAGGTTTTTGAAGTGTAGGGATGATCGATCCATTGCCCAAGGGCTAATATACGAATGATCTGCATGCAAATATTCCTATGACTTTAGGTGTAACTTCCAACGTCTAAGATTTTGTTGTTTTTGGTTTTAATGTTCCTAAGACTCATTACCTAAAGACAGTATTCTTTTTTTTTTTAGAGATGAAAATAAGATGTTATTGACATTGTGTATATGCGTTGGGTTGGGTAATTATAAGTTGTGTAATGAAATGAACTAAACTTGCTTTGTTGGTTTTGATGGGGTTGTTGCAGTTCAAGCAAGCGAAAACGGAGATCATATCGGCCAGCAAAGTGGCTTACCGTTTTATTCTAGGGGCCACGAACAATGTCATATCGCCCACAGAGTCTACAGATGACTCAAATAGAGGTACTTCTAGATTTCAAGCTGCATGGTTTAAGAATCTTATTACCACAGGTGCCAAACCATCGAGTAGTTCAGAAGTAGAGAATGAAGTTGAAGAAGGTGCAGCAGAGCAACAACGCAAAGCAAATGAAGAGACACCAATATTGCTCAATTCACGAGCGCATCAAGACATGTGA

mRNA sequence

ATGACTGACGTGATGCTGCATATATACGACGTCACGAATAGCGGATCAGATAAGACCAACAATACAATTGTTAATATCAACAAGATCTTCAAGGATGGAATTGGTCTAGGCGGTATCTTCCATAGCGCTGTTCAGGTTTATGGAGATGATGAATGGTCTTTTGGGTTTTGTGAGCAAGGAACTGGAGTTTTCAGTTGCCCTTCTGGACAGAATCCGATGTACACATATCGTGAAAGTATTAACCTTGGTAAAACAAACTGTTCAATTTTCAAGGTGAATCAGATTTTAAGGGAACTTAGTAGAGAGTGGCCTGGAAGTTCATATGACTTACTTTCAAGAAACTGTAACCACTTTTGTGATCAGTTCTGTGAAATGCTCAGTGTATCAAAACTTCCAGGTTGGGTTAATCGGTTTGCCAACGCTGGTGATGCTGCATTGGAAGTAGCTGGAAACACAGCCGTTCGTTTCAAGCAAGCGAAAACGGAGATCATATCGGCCAGCAAAGTGGCTTACCGTTTTATTCTAGGGGCCACGAACAATGTCATATCGCCCACAGAGTCTACAGATGACTCAAATAGAGGTACTTCTAGATTTCAAGCTGCATGGTTTAAGAATCTTATTACCACAGGTGCCAAACCATCGAGTAGTTCAGAAGTAGAGAATGAAGTTGAAGAAGGTGCAGCAGAGCAACAACGCAAAGCAAATGAAGAGACACCAATATTGCTCAATTCACGAGCGCATCAAGACATGTGA

Coding sequence (CDS)

ATGACTGACGTGATGCTGCATATATACGACGTCACGAATAGCGGATCAGATAAGACCAACAATACAATTGTTAATATCAACAAGATCTTCAAGGATGGAATTGGTCTAGGCGGTATCTTCCATAGCGCTGTTCAGGTTTATGGAGATGATGAATGGTCTTTTGGGTTTTGTGAGCAAGGAACTGGAGTTTTCAGTTGCCCTTCTGGACAGAATCCGATGTACACATATCGTGAAAGTATTAACCTTGGTAAAACAAACTGTTCAATTTTCAAGGTGAATCAGATTTTAAGGGAACTTAGTAGAGAGTGGCCTGGAAGTTCATATGACTTACTTTCAAGAAACTGTAACCACTTTTGTGATCAGTTCTGTGAAATGCTCAGTGTATCAAAACTTCCAGGTTGGGTTAATCGGTTTGCCAACGCTGGTGATGCTGCATTGGAAGTAGCTGGAAACACAGCCGTTCGTTTCAAGCAAGCGAAAACGGAGATCATATCGGCCAGCAAAGTGGCTTACCGTTTTATTCTAGGGGCCACGAACAATGTCATATCGCCCACAGAGTCTACAGATGACTCAAATAGAGGTACTTCTAGATTTCAAGCTGCATGGTTTAAGAATCTTATTACCACAGGTGCCAAACCATCGAGTAGTTCAGAAGTAGAGAATGAAGTTGAAGAAGGTGCAGCAGAGCAACAACGCAAAGCAAATGAAGAGACACCAATATTGCTCAATTCACGAGCGCATCAAGACATGTGA

Protein sequence

MTDVMLHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQGTGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCDQFCEMLSVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFILGATNNVISPTESTDDSNRGTSRFQAAWFKNLITTGAKPSSSSEVENEVEEGAAEQQRKANEETPILLNSRAHQDM

Homology

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BLAST of CmoCh18G012950 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-15
Identity = 49/143 (34.27%), Postives = 79/143 (55.24%), Query Frame = 0


Query: 1   MTDVMLHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 60
           +T V L++YD+T           VN N ++  GI   GIFHS ++ + + E+ +G  E  
Sbjct: 25  LTPVYLNVYDLTP----------VN-NYLYWFGI---GIFHSGIEAH-NLEYCYGAHEYP 84

Query: 61  T-GVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFC 120
           T GV+       P + +R S+ LG T+ S       + +LSR++ G +Y L+++NCNHF 
Sbjct: 85  TSGVYEVEPRNCPGFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFT 144

Query: 121 DQFCEMLSVSKLPGWVNRFANAG 143
           ++ C  L+   +PGW+NR A  G
Sbjct: 145 EEVCLQLTGKPIPGWINRLARVG 152

[Close]

BLAST of CmoCh18G012950 vs. ExPASy Swiss-Prot
Match: Q5PQ09 (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.0e-14
Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 38  GIFHSAVQVYGDDEWSFGFCEQGTGVFSCPSGQN----PMYTYRESINLGKTNCSIFKVN 97
           G+FHS +QVYG +    G     +GVF    G +      + ++E+I LG T+ +   + 
Sbjct: 26  GVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGDTFKFKEAIALGSTDFTENDIE 85

Query: 98  QILRELSREWPGSSYDLLSRNCNHFCDQFCEMLSVSKLPGWVNRFA 140
           +I+ EL +E+ G++Y L+ +NCNHF     E+L   ++P WVNR A
Sbjct: 86  KIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLA 131

[Close]

BLAST of CmoCh18G012950 vs. ExPASy Swiss-Prot
Match: H2KZK4 (Desumoylating isopeptidase 1 homolog OS=Caenorhabditis elegans OX=6239 GN=F36D4.5 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-13
Identity = 40/115 (34.78%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 30  FKDGIGLGGIFHSAVQVYGDDEWSFGFCEQGTGVF-SCPSGQNPM---YTYRESINLGKT 89
           +   IG+ GIFHS ++V+G +    G   Q +GVF + P     +   + ++ESI +G+T
Sbjct: 45  YASNIGV-GIFHSGIEVFGVEYAYGGHPYQFSGVFENSPQDAEELGETFKFKESIVVGET 104

Query: 90  NCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCDQFCEMLSVSKLPGWVNRFAN 141
             S   + ++++ L  ++ G  Y L+SRNCNHF       L+   +PGW+NR AN
Sbjct: 105 ERSTSDIRKLIKSLGEDFRGDRYHLISRNCNHFSAVLARELTGKDIPGWINRLAN 158

[Close]

BLAST of CmoCh18G012950 vs. ExPASy Swiss-Prot
Match: Q6DC39 (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.5e-13
Identity = 37/114 (32.46%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 30  FKDGIGLGGIFHSAVQVYGDDEWSFGFCEQGTGVFSCPSGQ----NPMYTYRESINLGKT 89
           F   +G+ G+FHS +++YG +    G     +G+F    G        + ++E+I LG T
Sbjct: 19  FTSSLGI-GVFHSGIEIYGREFAYGGHPYPFSGIFEITPGDATELGETFKFKEAIVLGST 78

Query: 90  NCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCDQFCEMLSVSKLPGWVNRFA 140
           + +   V +I+ E+ +E+ G++Y L+ +NCNHF     E+L   ++P WVNR A
Sbjct: 79  DFTEEDVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIPRWVNRLA 131

[Close]

BLAST of CmoCh18G012950 vs. ExPASy Swiss-Prot
Match: Q5ZIV7 (Deubiquitinase DESI2 OS=Gallus gallus OX=9031 GN=DESI2 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.7e-13
Identity = 35/106 (33.02%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 38  GIFHSAVQVYGDDEWSFGFCEQGTGVFSCPSGQ----NPMYTYRESINLGKTNCSIFKVN 97
           G+FHS ++VYG +    G     +G+F    G        + ++E++ LG T+     + 
Sbjct: 26  GVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFMEDDIE 85

Query: 98  QILRELSREWPGSSYDLLSRNCNHFCDQFCEMLSVSKLPGWVNRFA 140
           +I+ EL +E+ G++Y L+ +NCNHF     E+L   ++P WVNR A
Sbjct: 86  KIVEELGKEFKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLA 131

[Close]

BLAST of CmoCh18G012950 vs. ExPASy TrEMBL
Match: A0A6J1FZB8 (deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111449266 PE=3 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.1e-139
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MTDVMLHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 60
           MTDVMLHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG
Sbjct: 1   MTDVMLHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 60

Query: 61  TGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD 120
           TGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD
Sbjct: 61  TGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD 120

Query: 121 QFCEMLSVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFILGATNN 180
           QFCEMLSVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFILGATNN
Sbjct: 121 QFCEMLSVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFILGATNN 180

Query: 181 VISPTESTDDSNRGTSRFQAAWFKNLITTGAKPSSSSEVENEVEEGAAEQQRKANEETPI 240
           VISPTESTDDSNRGTSRFQAAWFKNLITTGAKPSSSSEVENEVEEGAAEQQRKANEETPI
Sbjct: 181 VISPTESTDDSNRGTSRFQAAWFKNLITTGAKPSSSSEVENEVEEGAAEQQRKANEETPI 240

Query: 241 LLNSRAHQDM 251
           LLNSRAHQDM
Sbjct: 241 LLNSRAHQDM 250

[Close]

BLAST of CmoCh18G012950 vs. ExPASy TrEMBL
Match: A0A6J1HY02 (deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111467680 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 2.9e-137
Identity = 247/250 (98.80%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MTDVMLHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 60
           MTDVMLHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG
Sbjct: 1   MTDVMLHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 60

Query: 61  TGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD 120
           TGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD
Sbjct: 61  TGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD 120

Query: 121 QFCEMLSVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFILGATNN 180
           QFCEMLSVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFILGATNN
Sbjct: 121 QFCEMLSVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFILGATNN 180

Query: 181 VISPTESTDDSNRGTSRFQAAWFKNLITTGAKPSSSSEVENEVEEGAAEQQRKANEETPI 240
           VISPTESTDDSNRGTSRFQAAWFKNLITTGAKPSSSSEV NEVEEGAAEQQ KANEETPI
Sbjct: 181 VISPTESTDDSNRGTSRFQAAWFKNLITTGAKPSSSSEVGNEVEEGAAEQQSKANEETPI 240

Query: 241 LLNSRAHQDM 251
           LLNSRA QDM
Sbjct: 241 LLNSRAQQDM 250

[Close]

BLAST of CmoCh18G012950 vs. ExPASy TrEMBL
Match: A0A6J1CHM6 (deSI-like protein At4g17486 OS=Momordica charantia OX=3673 GN=LOC111011583 PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.6e-127
Identity = 229/250 (91.60%), Postives = 239/250 (95.60%), Query Frame = 0


Query: 1   MTDVMLHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 60
           MTDV+LHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG
Sbjct: 1   MTDVILHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 60

Query: 61  TGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD 120
           TGVFSCPSGQNPMYTYRESINLG TNCSIFKVNQILRELSREWPG SYDLLSRNCNHFCD
Sbjct: 61  TGVFSCPSGQNPMYTYRESINLGTTNCSIFKVNQILRELSREWPGCSYDLLSRNCNHFCD 120

Query: 121 QFCEMLSVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFILGATNN 180
           QFCEML+VSKLPGWVNRFANAGDAALEVAGNTAVRF+QAKTEIISASKVAYRF+LGATNN
Sbjct: 121 QFCEMLNVSKLPGWVNRFANAGDAALEVAGNTAVRFRQAKTEIISASKVAYRFLLGATNN 180

Query: 181 VISPTESTDDSNRGTSRFQAAWFKNLITTGAKPSSSSEVENEVEEGAAEQQRKANEETPI 240
           VIS  EST +SN GTSRFQAAWFKNLITTGAKPSSSSE+EN VE+  A+QQR+ANEETPI
Sbjct: 181 VISAPESTSNSNSGTSRFQAAWFKNLITTGAKPSSSSEIENRVED--AQQQRRANEETPI 240

Query: 241 LLNSRAHQDM 251
           LLNSR+  DM
Sbjct: 241 LLNSRSQHDM 248

[Close]

BLAST of CmoCh18G012950 vs. ExPASy TrEMBL
Match: A0A6J1E3T7 (deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111430579 PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 3.9e-126
Identity = 225/250 (90.00%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 1   MTDVMLHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 60
           MTDV+LHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG
Sbjct: 1   MTDVILHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 60

Query: 61  TGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD 120
           TGVFSCPSGQNPMYTYRESINLG+TNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD
Sbjct: 61  TGVFSCPSGQNPMYTYRESINLGRTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD 120

Query: 121 QFCEMLSVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFILGATNN 180
           QFCEML+VSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEI+SASKVAYRF+LGATNN
Sbjct: 121 QFCEMLNVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIVSASKVAYRFLLGATNN 180

Query: 181 VISPTESTDDSNRGTSRFQAAWFKNLITTGAKPSSSSEVENEVEEGAAEQQRKANEETPI 240
           V+S  +ST DSNRG SRFQAAWFKNLITTGAKPSSSSE+ ++VE   A+QQRKANEE+P+
Sbjct: 181 VLSSPDSTSDSNRGASRFQAAWFKNLITTGAKPSSSSEIGSQVE--GAQQQRKANEESPM 240

Query: 241 LLNSRAHQDM 251
           LLNSR  +D+
Sbjct: 241 LLNSRLQRDV 248

[Close]

BLAST of CmoCh18G012950 vs. ExPASy TrEMBL
Match: A0A6J1JA28 (deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111482630 PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 6.7e-126
Identity = 225/250 (90.00%), Postives = 239/250 (95.60%), Query Frame = 0


Query: 1   MTDVMLHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 60
           MTDV+LHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG
Sbjct: 1   MTDVILHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 60

Query: 61  TGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD 120
           TGVFSCPSGQNPMYTYRESINLG+TNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD
Sbjct: 61  TGVFSCPSGQNPMYTYRESINLGRTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD 120

Query: 121 QFCEMLSVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFILGATNN 180
           QFCEML+V KLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEI+SASKVAYRF+LGATNN
Sbjct: 121 QFCEMLNVPKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIVSASKVAYRFLLGATNN 180

Query: 181 VISPTESTDDSNRGTSRFQAAWFKNLITTGAKPSSSSEVENEVEEGAAEQQRKANEETPI 240
           ++S  +ST DSNR TSRFQAAWFKNLITTGAKPSSSSE+ NEVE   A+QQRKANEE+P+
Sbjct: 181 ILSSPDSTSDSNRVTSRFQAAWFKNLITTGAKPSSSSEIGNEVE--GAQQQRKANEESPM 240

Query: 241 LLNSRAHQDM 251
           LLNSR  +D+
Sbjct: 241 LLNSRLQRDI 248

[Close]

BLAST of CmoCh18G012950 vs. TAIR 10
Match: AT4G25680.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 339.3 bits (869), Expect = 2.5e-93
Identity = 164/251 (65.34%), Postives = 203/251 (80.88%), Query Frame = 0


Query: 1   MTDVMLHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 60
           MT+V+LHIYDVTNSGS+KTNNTIV IN+ FKDGIGLGGIFHSA+QVYG+DEWS+G+CE G
Sbjct: 1   MTEVVLHIYDVTNSGSEKTNNTIVQINRFFKDGIGLGGIFHSAIQVYGNDEWSYGYCELG 60

Query: 61  TGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD 120
           TGVFSCPSG+NPMYTYRE I LGKT+C+IF VNQ+LRELSREWPG +YDLLS+NCNHFCD
Sbjct: 61  TGVFSCPSGKNPMYTYREKIVLGKTDCTIFMVNQMLRELSREWPGHTYDLLSKNCNHFCD 120

Query: 121 QFCEMLSVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFILGATNN 180
             C+ L V K+PGWVNRFANAGD ALEVAGNTA+R KQAKTE++SASKVAYRF+   T+N
Sbjct: 121 VLCDRLGVPKIPGWVNRFANAGDTALEVAGNTAMRMKQAKTELVSASKVAYRFLSNVTSN 180

Query: 181 VISPTEST-------DDSNRGTSRFQAAWFKNLITTGAKPSSSSEVENEVEEG--AAEQQ 240
           V + +  +       ++S+ G  R Q +W K L+ T AKPS+S+E+ N+ E+   A   Q
Sbjct: 181 VTNGSNGSPQRPGTLNNSDSGNLRLQGSWLKGLLNT-AKPSTSTEIGNKDEDANHAVTNQ 240

Query: 241 RKANEETPILL 243
           +K + ++ +LL
Sbjct: 241 KKQSRDSDVLL 250

[Close]

BLAST of CmoCh18G012950 vs. TAIR 10
Match: AT4G25660.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 337.0 bits (863), Expect = 1.3e-92
Identity = 162/254 (63.78%), Postives = 203/254 (79.92%), Query Frame = 0


Query: 1   MTDVMLHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 60
           M +V+LHIYDVTNSGS+KTNNTIV IN+ FKDGIGLGGIFHSA+QVYG+DEWS+G+CEQG
Sbjct: 1   MAEVVLHIYDVTNSGSEKTNNTIVQINRFFKDGIGLGGIFHSAIQVYGNDEWSYGYCEQG 60

Query: 61  TGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCD 120
           TGVFSCPSG+NPMYTYRE I LGKT+C+IF VNQILRELSREWPG +YDLLS+NCNHFCD
Sbjct: 61  TGVFSCPSGKNPMYTYREKIVLGKTDCTIFMVNQILRELSREWPGHTYDLLSKNCNHFCD 120

Query: 121 QFCEMLSVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFILGATNN 180
             C+ L V K+PGWVNRFA+AGD ALEVAGNTA+R KQAKTE++SASKVAYRF+   T+N
Sbjct: 121 VLCDRLGVPKIPGWVNRFAHAGDTALEVAGNTAMRVKQAKTELVSASKVAYRFLSNVTSN 180

Query: 181 VISPTEST----------DDSNRGTSRFQAAWFKNLITTGAKPSSSSEVENEVEE--GAA 240
           + + +  +          ++S+ G+ R Q +W K ++ T AKPS+S+E+ N+ E+     
Sbjct: 181 ITNGSNGSSGSPQRPGTLNNSDNGSFRLQGSWLKGILNT-AKPSTSTEIGNKEEDTNHTI 240

Query: 241 EQQRKANEETPILL 243
             Q+K N ++ +LL
Sbjct: 241 TNQKKQNRDSDVLL 253

[Close]

BLAST of CmoCh18G012950 vs. TAIR 10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-20
Identity = 70/210 (33.33%), Postives = 110/210 (52.38%), Query Frame = 0


Query: 14  SGSDKTNNTIVNINKIFKDGIGLG-GIFHSAVQVYGDDEWSFGFCE-QGTGVFSCPSGQN 73
           SGS      + ++  +   G  LG G+FHS V+V+G  E++FG  E   TG+F     + 
Sbjct: 14  SGSVPVYLNVYDLTPMNAYGYWLGLGVFHSGVEVHG-VEYAFGAHESSSTGIFEVEPKKC 73

Query: 74  PMYTYRESINLGKTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCDQFCEMLSVSKL 133
           P +T+R+SI +GKT+    +V   + +L+ E+ G+ Y L++RNCNHFC++ C  L+   +
Sbjct: 74  PGFTFRKSILVGKTDLVAKEVRVFMEKLAEEYQGNKYHLITRNCNHFCNEVCLKLAQKSI 133

Query: 134 PGWVNRFANAG---DAALEVAGNTAVRFKQAKTEIISASKVAYRFILGATNNV-ISPTES 193
           P WVNR A  G   +  L    N A   +  K E+  + K   R    +   +  SP+ S
Sbjct: 134 PRWVNRLARLGVLCNCVLPPRLNEAKVRRVGKGELSESEKKKLRNRSRSDPLLSSSPSSS 193

Query: 194 TDDSNRGTSRFQAAWFKNLITTGAKPSSSS 218
           T D++R   R +        ++G  PSSSS
Sbjct: 194 TPDNHRSHIRAK--------SSGNHPSSSS 214

[Close]

BLAST of CmoCh18G012950 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 95.9 bits (237), Expect = 4.9e-20
Identity = 58/170 (34.12%), Postives = 87/170 (51.18%), Query Frame = 0


Query: 38  GIFHSAVQVYGDDEWSFGFCEQG-TGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQIL 97
           GI+HS V+V+G  E+ FG  +   TG+F     Q P +T+R+SI +G+T+     V   +
Sbjct: 40  GIYHSGVEVHG-VEYGFGAHDHSTTGIFEVEPKQCPGFTFRKSILIGRTDLDPENVRVFM 99

Query: 98  RELSREWPGSSYDLLSRNCNHFCDQFCEMLSVSKLPGWVNRFANAG-------DAALEVA 157
            +L+ E+ G+SY L+++NCNHFC+  C  L+   +P WVNR A  G        A L   
Sbjct: 100 EKLAEEYSGNSYHLITKNCNHFCNDVCVQLTRRSIPSWVNRLARFGLFCNCVLPAELNET 159

Query: 158 GNTAVRFKQAKTEIISASKVAYRFILGATNNVISPTESTDDSNRGTSRFQ 200
               VR K+ K   +   K+  R         +S + S + S RG  R Q
Sbjct: 160 KVRQVRSKEEKIPEVEKKKLRSRSSRFPPGPSLSSSGSLNRSRRGERRRQ 208

[Close]

BLAST of CmoCh18G012950 vs. TAIR 10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 93.2 bits (230), Expect = 3.2e-19
Identity = 43/106 (40.57%), Postives = 69/106 (65.09%), Query Frame = 0


Query: 38  GIFHSAVQVYGDDEWSFGFCE-QGTGVFSCPSGQNPMYTYRESINLGKTNCSIFKVNQIL 97
           G++HS V+V+G  E+++G  E   TG+F     Q   +T+R+SI +GKT+    +V   +
Sbjct: 37  GVYHSGVEVHG-IEYAYGAHEYPSTGIFEGEPKQCEGFTFRKSILIGKTDLGPLEVRATM 96

Query: 98  RELSREWPGSSYDLLSRNCNHFCDQFCEMLSVSKLPGWVNRFANAG 143
            +L+  + GSSY+L+++NCNHFCD+ C  L+ + +P WVNR A  G
Sbjct: 97  EQLADNYKGSSYNLITKNCNHFCDETCIKLTGNPIPSWVNRLARIG 141

The following BLAST results are available for this feature:

BLAST of CmoCh18G012950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VG8	2.1e-15	34.27	DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV...	[more]
Q5PQ09	3.0e-14	35.85	Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1	[more]
H2KZK4	1.9e-13	34.78	Desumoylating isopeptidase 1 homolog OS=Caenorhabditis elegans OX=6239 GN=F36D4....	[more]
Q6DC39	2.5e-13	32.46	Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1	[more]
Q5ZIV7	5.7e-13	33.02	Deubiquitinase DESI2 OS=Gallus gallus OX=9031 GN=DESI2 PE=2 SV=1	[more]

BLAST of CmoCh18G012950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZB8	1.1e-139	100.00	deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111449266 PE=3 S...	[more]
A0A6J1HY02	2.9e-137	98.80	deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111467680 PE=3 SV=...	[more]
A0A6J1CHM6	3.6e-127	91.60	deSI-like protein At4g17486 OS=Momordica charantia OX=3673 GN=LOC111011583 PE=3 ...	[more]
A0A6J1E3T7	3.9e-126	90.00	deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111430579 PE=3 S...	[more]
A0A6J1JA28	6.7e-126	90.00	deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111482630 PE=3 SV=...	[more]

BLAST of CmoCh18G012950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25680.1	2.5e-93	65.34	PPPDE putative thiol peptidase family protein	[more]
AT4G25660.1	1.3e-92	63.78	PPPDE putative thiol peptidase family protein	[more]
AT2G25190.1	1.7e-20	33.33	PPPDE putative thiol peptidase family protein	[more]
AT5G25170.1	4.9e-20	34.12	PPPDE putative thiol peptidase family protein	[more]
AT1G80690.1	3.2e-19	40.57	PPPDE putative thiol peptidase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008580	PPPDE peptidase domain	SMART	SM01179	DUF862_2a	coord: 2..157 e-value: 9.8E-45 score: 164.6
IPR008580	PPPDE peptidase domain	PFAM	PF05903	Peptidase_C97	coord: 3..144 e-value: 6.8E-40 score: 136.3
IPR008580	PPPDE peptidase domain	PANTHER	PTHR12378	DESUMOYLATING ISOPEPTIDASE	coord: 1..237
IPR008580	PPPDE peptidase domain	PROSITE	PS51858	PPPDE	coord: 2..150 score: 42.69281
IPR042266	PPPDE peptidase domain superfamily	GENE3D	3.90.1720.30	PPPDE domains	coord: 1..168 e-value: 6.8E-47 score: 161.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..250
None	No IPR available	PANTHER	PTHR12378:SF9	EXPRESSED PROTEIN	coord: 1..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G012950.1	CmoCh18G012950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016579	protein deubiquitination
molecular_function	GO:0101005	deubiquitinase activity
molecular_function	GO:0008233	peptidase activity