CmoCh18G012710 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G012710
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Actin depolymerizing factor, putative
Location	Cmo_Chr18: 12357550 .. 12362403 (-)
RNA-Seq Expression	CmoCh18G012710
Synteny	CmoCh18G012710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAGAAATATATGAATTAAAAATATAAATTTAAGGATTAAATGTTAAACTTAGGGTTCTATCTAAGATTGAAATCCATGAGAATAGTATTTGTTTTGGGGCATTGATATACAAAGAAGCCCAATTAGAATGGGAAGAGAAATCGACGTGTAGTTAAACCCATTCGCATAAACCTCGCCGTCAGACCATTCGTTGAAAGAACCTCTTCGGGAATTCGCCGGAGCCGATCGACTTTCGATTATCAGGTGAAGATGGTGAGCCGGAGGCAAAAGCTTGCCCGGAAAAAGTACAGAGAAGAACACCCAGAATTGTTCCCGAAAGCAGAACCAACGCCACCAAAAGATCCGGAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAGTGAATTCAAGCGCAAAAAGGGAGAATCGGATTCAAGGAACGACCCGATTAAACCACACAAAAAGGGATTTAAGAAACACCCTCTCAGAGTTCCTGGGATGAAGCCTGGTGAAAGCTGCTTCATCTGCAAAGCTAAAGACCACATCGCTAAGTTTTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGGTTTGATTTCTTGTTTTACCTTTCTTGTTTATGGTGTTTCACTGTTCACTGAGATTATGGAAATTTTGCTCATAGACATGGTATTGTTAGGAATGTGGTGTTTATGAAATTGGTTGGGATTCAGTTTGCCTCTTCAATTTGAGGCAAACTTCTCAACTCATTGATGCCAATGCTTAGGTTTCTCCATCAATTATGATCACTTGCAATAGATTGTTAGAGGTCTTGTGATCAAGAATAACATAGATTATTTGGGAGAGCTCTATTGTGAGATCCCACGTCCGTCGGAGAGGAGAACGAAGCATTCCTTATAAGGGTATGGAAACCTCTCCTTAGGAGACGCGTTTTAAAAACCGTGAGGCTGACTATGATACTCAACGAGCCAAAGCAGACAATATCTGCTAGCGGTGAGGTTGGGCTGTTACAAATGGTATTAGAGTCAGATACTAGGCGGTGTGCCAACGAGAATGCTGATCTCCCAAGGGGGATGGATTGTGAGATCGCACATTGATTGAAGAGGGAAATGAAGCATTTCTTATAAGAGTATGGAAACCTCTTCCCAGGAGACGTGTCTTAAAAACCGTGAGGCTGATGGGGATACGCAATGAGCCAAAGCGGACAATATCTACTAGCTGTAGGCTTGAGATGTTACAAATGGTATCAGAGCCAGACACCGGGCGGTGTGCTAGTGAGAACGCTGATCTTCCAAGGGAGAAGGATTGTGAGATCTCACATCAGTTGGAGAGGAGAACGAAGCATTTCTTATAAGGGTGTGGAAACCTCTCCCCAGTAGACGTGTTTTAAAAACCTTGAGGAGAAGGGAAAGGTCACAAAAGACAATATCTGCTAGCGATGGGGTTGAACTGTTACATCTATAGCAGACGTGTATACCAAATTGTTATTTGGCATTCACAGATATGCTTACTTTGCCGGAGACGAGGCCACAGCCTCAAGAACTGCCCCGACAAAACTGAAGACACAGTGGATAAGAAGTTATGCTATAATTGTGGTGAAACAGGACATTCACTAGCTAATTGTCCACAACCTCTTCAACATGGTAAATTTGGTTTCAATTCATACTCAAATTCATCTGTGCTTTGCATAATATGTAGAACAATTCCTTTTGGGTCTTTTCTGTTCCTAAACTCTTTCTACTGTTTTTCATCTTGGATCTGTAGGGGGAACTAAATTTGCCAATTGCTTTATTTGTAATGAAAGTGGACACTTAAGCAAGAACTGCCCAAAGAATACTCATGGGATCTACCCTAAGGTATTTGGTTTAACTTGCACGTTATGGTCACGGGCCAGGCTCTTGGCTTCGCCTGTACGTTGCCCCGTAGTTTCCTGTATCGTATAGCTCGAATAATTTCGTTGTATGATATTCTGCAGGGTGGTTGTTGTAAAACTTGTGGGGAAGTGACACATTTAGCTAAGGACTGTCCAAAAAAAGGCACACAAGTTTTTGCTGGGCCTGGTGCATCTGGTAACAGATGTAAGTCTTCCTGTTTGCTGCTGTGACATGTTTGTTGACACAAATGATCTAAAATTATAATGTTCGGGAACCGAGTTCTTCGTATCGATAAACTTGTGCTTAAGATGCTTAGGATCTCCAGATTTGTGCTAAAGCTTTGTATTGTGAGTAGTAATTCGTTTTCTTTTGTCTCAGCATCTGGATATGTGGAAATGTCGAGACGACCAGAAACGAAGCTCGTCAGTGGTGACGACCTCGAGGATGACTTCATGGTCGAGGAAGATAATTTACAGATCAAAGATGCGAAACTCGGAAAGAAAAAGGGTCCCAAAGTTGTGAAATTCATGGATTGATAGGTCTATGGGGAAGATTAAACCTCATGTGTGTTGTAAAACCTTTTCTTTTACACGCAGAGAATATAGGAAGTCCCCTGAATGTATTTTTGTCTCTTAAATATAATATTATCAAGATTTTAGAGTTGTTTAATGTTCAAGCTTTTGATAACATTACTTCTACTTATTATTTTGTCGATCGAACACTCTATTTTTTAAAAAATTACAATATGATTATTCAAAATTACCATTAGAATAGAAATCTCTGATCGAAATTGCAATGATTTGGAACGATGAGATGGTGACTAGGATGTTCAACTAAATTAAGTTTGAAAGAACGACATTCAGATATGTTAATTTTTTTTTGACAAACATTCTAGAATTACACTCAGAAAACAACACTACATCATTAGTGTCATCGTGGGATATGTCTCAGCTCAAGGCCACCTGGTAGATATTATCTAATTTAGCTTGTTACGTATAGTCGTGAGCCTCGTAGTTTTAAAATGCATTCATCAGGGAGAGGTTTCTACGCTCTTATAAGGAATGATAAGTTTTCCTCTCCAACCAATGTGGGATCTCATAATCCATCTCCACCGGGAGCCCAATATCCTCGCTACCACATTGCCATCAGTCAGCATTTAGCTCTGATACTATCATCAACCAAGTGTCTGGCTCTAATACTATTTGTAACGGTTCAAACCCACCACTAGTAAATAATGATACTATTTGTAATAGCTCAAACCCACCGCTAGTAAATATTGTCTACTTTGATCGGTATTGCTTCGTTAACTATACTAAACTAAAGTGAGACAAGCTCAAACTAAAAACATGAAACATAGATCATAGATTTGATGAAACATGAAATTGTTTCATTTCTTAAAAAAGAAAGTCTTTTTTTTTGGGGGAAAGTGTTGATAGGACAGGAAGGAAGAATGTTGTTGTGTTTTAGCATGAAAGGTGGCATAGAAAAATGTGGAGAACACAATATTAGGCATTCAAAACAATTCTCAACCTTAGTTTTGTCCCTCAAATTACTCCTCTTTTCCTCTTTAATCTCATCTCATCTCATCTCTCCCCCCAAAATAAGGATCTCTCCCTCTCCCTCTTCATCTCTAACATTTCTCTTCTCTTCTCTCTTTCTTTCACTCTTCTCCTCCATTCCCCTCTCTCACACATTCATACACAATATGGTATGCTCTTTCCTTTATTTTCATCATCATTGTGTTGTTCTTATTTTTGTTACTTTAAGGCTTGATGGACTAATGCTTGTCATATTATGGGGTGAATTAGGCGAACGCGGCGTCTGGAATGGCTGTGAGAGATGAGTGCAAGCTCAAGTTTTTGGAGTTAAAAACAAAGAGGAACTATCGTTTCATTATATTCAAGATCGAAAATCAAGAAGTGGTTGTGGAGAAACTTGGCAGCCCTACAGAAACCTACGACGATTTCACTGCTGCTATTCCTCCTAACGAGTGTCGTTATGCTGTCTTTGATTTTGACTTCACCACCGACGAGAACTGCCAGAAAAGCAAGATCTTCTTCATAGCATGGTGACGTTAACCTCGTCTTCACACCTTCACATTGGTTTCATAAAAAATCTCTTTTGTCTCTATCAAACCTTAAACTAAGCTTGTCTGCTTGTCCAAATGTCTGTGTTTCTCTGTTTTGAAGGTCACCCGACACATCGATCGTGCGAAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGGTGGAATTGCAAGCCACTGATGCAAGCGAAATGAGCTTCGACATTATCAAAGCTCGAGCCTTTTAAGCTCACTTTTCATCTCCATTCTTGAGCCTGCTTAATGTTGTGATACTATACTACTCATTCACTTTCTTTTCCACTTTTTTTGTCCTTTTTTTGTACGTTTTAATCTTTTTTCACAGCCTTGTTTTTTCTTTATGGTGTTTCCACTCATATCTAAAGCTGTATCGACGATCTGTTGTAGTTCTATATCAACATTCCTTCTTTCACTTAATCTTTCACAGTTTCAATGCGTATGTTTCAAATGGTAACAAAAAGATTAGAACTTTGAGAAGAAAACATGTTAAAGAACAACACCCAGATGTGTTTTTGTCTATGGCTGCTTACTTTTAGTTGTCTCCCACTGTTCCACTTGTTTGATTGAACTCTGTTTTGTACTATGAACAAAAAGAAGCGATGCCGGATCATATGGCGGCGGCAGAGTGCAGGGGCTTGTCTCTGCAGGGCTCTTCACCAACGATTCTGTCATGAATTCTTGAGTGAGCCCTTGAGCTGGACAAGCCATGGCCTCGGAACAAAGCTCGATCGCGTCGGGCGGTATCGATGGCTTGAATGTTAGAAGTTTAGAATATTGTGTTAGGAGATGAAACATGTAGTCATATACATACTCCATTTTCAGCTCCTCTTGGATGAAACTGGCTGCTGCCTTGCCAATGGCCTGCGCCTGA

mRNA sequence

ATTTAGAAATATATGAATTAAAAATATAAATTTAAGGATTAAATGTTAAACTTAGGGTTCTATCTAAGATTGAAATCCATGAGAATAGTATTTGTTTTGGGGCATTGATATACAAAGAAGCCCAATTAGAATGGGAAGAGAAATCGACGTGTAGTTAAACCCATTCGCATAAACCTCGCCGTCAGACCATTCGTTGAAAGAACCTCTTCGGGAATTCGCCGGAGCCGATCGACTTTCGATTATCAGGTGAAGATGGTGAGCCGGAGGCAAAAGCTTGCCCGGAAAAAGTACAGAGAAGAACACCCAGAATTGTTCCCGAAAGCAGAACCAACGCCACCAAAAGATCCGGAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAGTGAATTCAAGCGCAAAAAGGGAGAATCGGATTCAAGGAACGACCCGATTAAACCACACAAAAAGGGATTTAAGAAACACCCTCTCAGAGTTCCTGGGATGAAGCCTGGTGAAAGCTGCTTCATCTGCAAAGCTAAAGACCACATCGCTAAGTTTTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGGGTGGTTGTTGTAAAACTTGTGGGGAAGTGACACATTTAGCTAAGGACTGTCCAAAAAAAGGCACACAAGTTTTTGCTGGGCCTGGTGCATCTGCATCTGGATATGTGGAAATGTCGAGACGACCAGAAACGAAGCTCGTCAGTGGTGACGACCTCGAGGATGACTTCATGGTCGAGGAAGATAATTTACAGATCAAAGATGCGAAACTCGGAAAGAAAAAGGGTCCCAAAGTTGCGAACGCGGCGTCTGGAATGGCTGTGAGAGATGAGTGCAAGCTCAAGTTTTTGGAGTTAAAAACAAAGAGGAACTATCGTTTCATTATATTCAAGATCGAAAATCAAGAAGTGGTTGTGGAGAAACTTGGCAGCCCTACAGAAACCTACGACGATTTCACTGCTGCTATTCCTCCTAACGAGTGTCGTTATGCTGTCTTTGATTTTGACTTCACCACCGACGAGAACTGCCAGAAAAGCAAGATCTTCTTCATAGCATGGTCACCCGACACATCGATCGTGCGAAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGAAGCGATGCCGGATCATATGGCGGCGGCAGAGTGCAGGGGCTTGTCTCTGCAGGGCTCTTCACCAACGATTCTGTCATGAATTCTTGAGTGAGCCCTTGAGCTGGACAAGCCATGGCCTCGGAACAAAGCTCGATCGCGTCGGGCGCTCCTCTTGGATGAAACTGGCTGCTGCCTTGCCAATGGCCTGCGCCTGA

Coding sequence (CDS)

ATGGTGAGCCGGAGGCAAAAGCTTGCCCGGAAAAAGTACAGAGAAGAACACCCAGAATTGTTCCCGAAAGCAGAACCAACGCCACCAAAAGATCCGGAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAGTGAATTCAAGCGCAAAAAGGGAGAATCGGATTCAAGGAACGACCCGATTAAACCACACAAAAAGGGATTTAAGAAACACCCTCTCAGAGTTCCTGGGATGAAGCCTGGTGAAAGCTGCTTCATCTGCAAAGCTAAAGACCACATCGCTAAGTTTTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGGGTGGTTGTTGTAAAACTTGTGGGGAAGTGACACATTTAGCTAAGGACTGTCCAAAAAAAGGCACACAAGTTTTTGCTGGGCCTGGTGCATCTGCATCTGGATATGTGGAAATGTCGAGACGACCAGAAACGAAGCTCGTCAGTGGTGACGACCTCGAGGATGACTTCATGGTCGAGGAAGATAATTTACAGATCAAAGATGCGAAACTCGGAAAGAAAAAGGGTCCCAAAGTTGCGAACGCGGCGTCTGGAATGGCTGTGAGAGATGAGTGCAAGCTCAAGTTTTTGGAGTTAAAAACAAAGAGGAACTATCGTTTCATTATATTCAAGATCGAAAATCAAGAAGTGGTTGTGGAGAAACTTGGCAGCCCTACAGAAACCTACGACGATTTCACTGCTGCTATTCCTCCTAACGAGTGTCGTTATGCTGTCTTTGATTTTGACTTCACCACCGACGAGAACTGCCAGAAAAGCAAGATCTTCTTCATAGCATGGTCACCCGACACATCGATCGTGCGAAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGAAGCGATGCCGGATCATATGGCGGCGGCAGAGTGCAGGGGCTTGTCTCTGCAGGGCTCTTCACCAACGATTCTGTCATGAATTCTTGAGTGAGCCCTTGAGCTGGACAAGCCATGGCCTCGGAACAAAGCTCGATCGCGTCGGGCGCTCCTCTTGGATGAAACTGGCTGCTGCCTTGCCAATGGCCTGCGCCTGA

Protein sequence

MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKEKKKKKSEFKRKKGESDSRNDPIKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKGGCCKTCGEVTHLAKDCPKKGTQVFAGPGASASGYVEMSRRPETKLVSGDDLEDDFMVEEDNLQIKDAKLGKKKGPKVANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQKRCRIIWRRQSAGACLCRALHQRFCHEFLSEPLSWTSHGLGTKLDRVGRSSWMKLAAALPMACA

Homology

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BLAST of CmoCh18G012710 vs. ExPASy Swiss-Prot
Match: Q67ZM4 (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 8.1e-53
Identity = 100/116 (86.21%), Postives = 109/116 (93.97%), Query Frame = 0


Query: 183 VANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 242
           +ANAASGMAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P ETYDDFTA++P 
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 243 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQ 299
           NECRYAVFDFDF TDENCQKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQ 116

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BLAST of CmoCh18G012710 vs. ExPASy Swiss-Prot
Match: Q8LFH6 (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana OX=3702 GN=ADF12 PE=2 SV=2)

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-50
Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 0


Query: 183 VANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 242
           +ANAASGMAV DECKLKFLELK KRNYRFIIF+I+ Q+VVVEKLGSP E YDDFT  +PP
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPP 60

Query: 243 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQ 299
           NECRYAV+DFDFTT EN QKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQ
Sbjct: 61  NECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQ 116

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BLAST of CmoCh18G012710 vs. ExPASy Swiss-Prot
Match: P30175 (Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.4e-49
Identity = 92/118 (77.97%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 183 VANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYDDFTAAI 242
           +AN++SGMAV DECKLKF+ELK KRN+RFI+FKIE   Q+V VE+LG P E+YDDFT  +
Sbjct: 1   MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECL 60

Query: 243 PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQ 299
           PPNECRYAVFDFDF TDENCQKSKIFFI+WSPDTS VR+KM+YAS+KDRFKRELDGIQ
Sbjct: 61  PPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQ 118

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BLAST of CmoCh18G012710 vs. ExPASy Swiss-Prot
Match: Q9LQ81 (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-47
Identity = 91/118 (77.12%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 183 VANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYDDFTAAI 242
           +AN+ASGM V DECKLKFLELK KRNYRFI+FKI+   Q+V+++KLG+P ETY+DFT +I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 243 PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQ 299
           P +ECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS VR+KM+YASSKDRFKRELDGIQ
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQ 118

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BLAST of CmoCh18G012710 vs. ExPASy Swiss-Prot
Match: Q570Y6 (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana OX=3702 GN=ADF8 PE=2 SV=2)

HSP 1 Score: 190.7 bits (483), Expect = 3.0e-47
Identity = 89/118 (75.42%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 183 VANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYDDFTAAI 242
           +AN+ASGM V DECK+KFLELK KR YRFI+FKI+   Q+V +EKLG+P ETYDDFT++I
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 243 PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQ 299
           P +ECRYAV+DFDFTT++NCQKSKIFFIAWSPDTS VR+KM+YASSKDRFKRE++GIQ
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQ 118

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BLAST of CmoCh18G012710 vs. ExPASy TrEMBL
Match: A0A6J1G1V2 (uncharacterized protein LOC111449917 OS=Cucurbita moschata OX=3662 GN=LOC111449917 PE=3 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 4.6e-144
Identity = 297/465 (63.87%), Postives = 298/465 (64.09%), Query Frame = 0


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKEKKKKKSEFKRKKGESDSRNDPIK 60
           MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKEKKKKKSEFKRKKGESDSRNDPIK
Sbjct: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKEKKKKKSEFKRKKGESDSRNDPIK 60

Query: 61  PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKN---------------- 120
           PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKN                
Sbjct: 61  PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNC 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 PDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGI 180

Query: 181 --KGGCCKTCGEVTHLAKDCPKKGTQVFAGPGAS---ASGYVEMSRRPETKLVSGDDLED 240
             KGGCCKTCGEVTHLAKDCPKKGTQVFAGPGAS   +SGYVEMSRRPETKLVSGDDLED
Sbjct: 181 YPKGGCCKTCGEVTHLAKDCPKKGTQVFAGPGASGNRSSGYVEMSRRPETKLVSGDDLED 240

Query: 241 DFMVEEDNLQIKDAKLGKKKGPKV------------------------------------ 299
           DFMVEEDNLQIKDAKLGKKKGPKV                                    
Sbjct: 241 DFMVEEDNLQIKDAKLGKKKGPKVVKFMDCMKGGIEKCGEHNIRHSKQFSTLVLSLKLLL 300

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BLAST of CmoCh18G012710 vs. ExPASy TrEMBL
Match: A0A6J1HYC2 (uncharacterized protein LOC111467373 OS=Cucurbita maxima OX=3661 GN=LOC111467373 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 8.5e-138
Identity = 287/465 (61.72%), Postives = 290/465 (62.37%), Query Frame = 0


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKEKKKKKSEFKRKKGESDSRNDPIK 60
           MVSRRQKLARKKYREEHPELFPKAEPTPPKDP    EKKKKKSEFKRKKGESDSRNDP K
Sbjct: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDP----EKKKKKSEFKRKKGESDSRNDPNK 60

Query: 61  PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKN---------------- 120
           PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKN                
Sbjct: 61  PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNC 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 PDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHGI 180

Query: 181 --KGGCCKTCGEVTHLAKDCPKKGTQVFAGPGAS---ASGYVEMSRRPETKLVSGDDLED 240
             KGGCCKTCGEVTHLAKDCPKKGTQV+AGPG S   +SGYVEMSRRPET+LVSGDDLED
Sbjct: 181 YPKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETRLVSGDDLED 240

Query: 241 DFMVEEDNLQIKDAKLGKKKGPKV------------------------------------ 299
           DFMVEEDNLQIKDAKLG KKGPKV                                    
Sbjct: 241 DFMVEEDNLQIKDAKLGNKKGPKVVKFMDCMKGGIEKCGEHNIRHSKQFSTLVLSLKLLL 300

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BLAST of CmoCh18G012710 vs. ExPASy TrEMBL
Match: A0A5A7SR44 (Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001180 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 7.4e-134
Identity = 268/397 (67.51%), Postives = 277/397 (69.77%), Query Frame = 0


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKEKKKKKSEFKRKKGESDSRNDPIK 60
           MVS+RQ+LARKKYRE HPELFPKAEPTPPKDP+     KKKKS+FKRKKGES+S  DP K
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEPTPPKDPD-----KKKKSKFKRKKGESNSNRDPNK 60

Query: 61  PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKN---------------- 120
           PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAK CPEKAQWEKN                
Sbjct: 61  PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKVCLSGLPFVLLEFHC 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 LLDICLLCRRRGHSLKNCPDKNEGTMDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFI 180

Query: 181 --------------------KGGCCKTCGEVTHLAKDCPKKGTQVFAGPGAS---ASGYV 240
                               KGGCCKTCGEVTHLAKDCPKKGTQVF   G S   +SGYV
Sbjct: 181 CNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVSGYRSSGYV 240

Query: 241 EMSRRPETKLVSGDDLEDDFMVEEDNLQIKDAKLGKKKGPKVANAASGMAVRDECKLKFL 299
           EM RRPETKLVSGDDLEDDFM++ED LQIKDAK+GKKKGPK ANAASGMAVRDECKLKFL
Sbjct: 241 EMPRRPETKLVSGDDLEDDFMIDEDRLQIKDAKMGKKKGPK-ANAASGMAVRDECKLKFL 300

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BLAST of CmoCh18G012710 vs. ExPASy TrEMBL
Match: A0A1S3AY90 (LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 OS=Cucumis melo OX=3656 GN=LOC103484078 PE=3 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 3.7e-125
Identity = 254/376 (67.55%), Postives = 263/376 (69.95%), Query Frame = 0


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKEKKKKKSEFKRKKGESDSRNDPIK 60
           MVS+RQ+LARKKYRE HPELFPKAEPTPPKDP+     KKKKS+FKRKKGES+S  DP K
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEPTPPKDPD-----KKKKSKFKRKKGESNSNRDPNK 60

Query: 61  PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKN---------------- 120
           PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAK CPEKAQWEKN                
Sbjct: 61  PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNC 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 PDKNEGTMDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGI 180

Query: 181 --KGGCCKTCGEVTHLAKDCPKKGTQVFAGPGASASGYVEMSRRPETKLVSGDDLEDDFM 240
             KGGCCKTCGEVTHLAKDCPKKGTQVF     +ASGYVEM RRPETKLVSGDDLEDDFM
Sbjct: 181 YPKGGCCKTCGEVTHLAKDCPKKGTQVF---DRAASGYVEMPRRPETKLVSGDDLEDDFM 240

Query: 241 VEEDNLQIKDAKLGKKKGPKVANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVV 299
           ++ED    K+           ANAASGMAVRDECKLKFLELK KRNYRFIIFKIENQEVV
Sbjct: 241 IDEDQ---KNKWRDILVVMNXANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVV 300

[Close]

BLAST of CmoCh18G012710 vs. ExPASy TrEMBL
Match: A0A6J1J3Y1 (uncharacterized protein LOC111483178 OS=Cucurbita maxima OX=3661 GN=LOC111483178 PE=3 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.6e-120
Identity = 254/443 (57.34%), Postives = 273/443 (61.63%), Query Frame = 0


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKEKKKKKSEFKRKKGESDSRNDPIK 60
           MVS+RQ+LARKKYREEHPELFP+AEPTPPKDP+KK  KKKKKS+FKRKK ES+S +DP K
Sbjct: 1   MVSQRQRLARKKYREEHPELFPEAEPTPPKDPDKK--KKKKKSKFKRKKAESNSTSDPNK 60

Query: 61  PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKN---------------- 120
           PHKK FKKHPLRV GMKPGESCFICKAKDHIAK CPEKAQWEKN                
Sbjct: 61  PHKKSFKKHPLRVTGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNC 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 PDKNERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGI 180

Query: 181 --KGGCCKTCGEVTHLAKDCPKKGTQVFAG--PGASASGYVEMSRRPETKLVSGDDLEDD 240
             KGGCCKTCGEVTHLAKDCP K TQ   G   G  +SGYVEM RRPET+ VSGDDLEDD
Sbjct: 181 YPKGGCCKTCGEVTHLAKDCPNKATQFSGGAYDGNKSSGYVEMHRRPETRRVSGDDLEDD 240

Query: 241 FMVEEDNLQIKDAKLGKKKGP--------------------------------------- 299
           F ++ED+LQ+KDAK+ KKKGP                                       
Sbjct: 241 FNIDEDHLQMKDAKVEKKKGPRVVQFMDKTIVSLGFVPQITLLYSDLSLPQNKDLSLLPS 300

[Close]

BLAST of CmoCh18G012710 vs. TAIR 10
Match: AT4G25590.1 (actin depolymerizing factor 7 )

HSP 1 Score: 209.1 bits (531), Expect = 5.7e-54
Identity = 100/116 (86.21%), Postives = 109/116 (93.97%), Query Frame = 0


Query: 183 VANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 242
           +ANAASGMAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P ETYDDFTA++P 
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 243 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQ 299
           NECRYAVFDFDF TDENCQKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQ 116

[Close]

BLAST of CmoCh18G012710 vs. TAIR 10
Match: AT5G52360.1 (actin depolymerizing factor 10 )

HSP 1 Score: 201.8 bits (512), Expect = 9.2e-52
Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 0


Query: 183 VANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 242
           +ANAASGMAV DECKLKFLELK KRNYRFIIF+I+ Q+VVVEKLGSP E YDDFT  +PP
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPP 60

Query: 243 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQ 299
           NECRYAV+DFDFTT EN QKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQ
Sbjct: 61  NECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQ 116

[Close]

BLAST of CmoCh18G012710 vs. TAIR 10
Match: AT1G01750.1 (actin depolymerizing factor 11 )

HSP 1 Score: 192.2 bits (487), Expect = 7.3e-49
Identity = 91/118 (77.12%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 183 VANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYDDFTAAI 242
           +AN+ASGM V DECKLKFLELK KRNYRFI+FKI+   Q+V+++KLG+P ETY+DFT +I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 243 PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQ 299
           P +ECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS VR+KM+YASSKDRFKRELDGIQ
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQ 118

[Close]

BLAST of CmoCh18G012710 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 190.7 bits (483), Expect = 2.1e-48
Identity = 89/118 (75.42%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 183 VANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYDDFTAAI 242
           +AN+ASGM V DECK+KFLELK KR YRFI+FKI+   Q+V +EKLG+P ETYDDFT++I
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 243 PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQ 299
           P +ECRYAV+DFDFTT++NCQKSKIFFIAWSPDTS VR+KM+YASSKDRFKRE++GIQ
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQ 118

[Close]

BLAST of CmoCh18G012710 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 186.4 bits (472), Expect = 4.0e-47
Identity = 83/116 (71.55%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 183 VANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 242
           +ANAASGMAV D+CKLKF+ELK KR +R I++KIE+++V+VEKLG P ++YDDF A++P 
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQVIVEKLGEPEQSYDDFAASLPA 60

Query: 243 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQ 299
           ++CRY ++DFDF T ENCQKSKIFFIAWSPDT+ VR+KM+YASSKDRFKRELDGIQ
Sbjct: 61  DDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQ 116

The following BLAST results are available for this feature:

BLAST of CmoCh18G012710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67ZM4	8.1e-53	86.21	Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1	[more]
Q8LFH6	1.3e-50	84.48	Actin-depolymerizing factor 12 OS=Arabidopsis thaliana OX=3702 GN=ADF12 PE=2 SV=...	[more]
P30175	5.4e-49	77.97	Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1	[more]
Q9LQ81	1.0e-47	77.12	Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=...	[more]
Q570Y6	3.0e-47	75.42	Actin-depolymerizing factor 8 OS=Arabidopsis thaliana OX=3702 GN=ADF8 PE=2 SV=2	[more]

BLAST of CmoCh18G012710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1V2	4.6e-144	63.87	uncharacterized protein LOC111449917 OS=Cucurbita moschata OX=3662 GN=LOC1114499...	[more]
A0A6J1HYC2	8.5e-138	61.72	uncharacterized protein LOC111467373 OS=Cucurbita maxima OX=3661 GN=LOC111467373...	[more]
A0A5A7SR44	7.4e-134	67.51	Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3AY90	3.7e-125	67.55	LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 OS=Cucumis melo OX=365...	[more]
A0A6J1J3Y1	1.6e-120	57.34	uncharacterized protein LOC111483178 OS=Cucurbita maxima OX=3661 GN=LOC111483178...	[more]

BLAST of CmoCh18G012710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25590.1	5.7e-54	86.21	actin depolymerizing factor 7	[more]
AT5G52360.1	9.2e-52	84.48	actin depolymerizing factor 10	[more]
AT1G01750.1	7.3e-49	77.12	actin depolymerizing factor 11	[more]
AT4G00680.1	2.1e-48	75.42	actin depolymerizing factor 8	[more]
AT3G46000.1	4.0e-47	71.55	actin depolymerizing factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 194..319 e-value: 5.0E-41 score: 152.3
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 196..300 e-value: 5.0E-30 score: 103.8
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 187..319 score: 28.22703
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 81..97 e-value: 0.022 score: 21.4 coord: 108..124 e-value: 0.019 score: 21.8
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 109..124 score: 9.026372
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 181..306 e-value: 4.7E-45 score: 154.7
None	No IPR available	GENE3D	4.10.60.10		coord: 76..135 e-value: 1.2E-10 score: 42.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	PANTHER	PTHR11913:SF92	COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN	coord: 181..298
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 183..300
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 181..298
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 188..299 e-value: 5.87958E-54 score: 172.356
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 75..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G012710.1	CmoCh18G012710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0003779	actin binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding