Homology
BLAST of CmoCh18G012660 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 397.5 bits (1020), Expect = 2.3e-109
Identity = 196/487 (40.25%), Postives = 305/487 (62.63%), Query Frame = 0
Query: 19 VQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYVLNSCADLGWFWDGKKVHC 78
V N++IR +A N ++ ++ E+ + GL NFTYP++L +C+ W K +H
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHN 141
Query: 79 RIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDARKLFDEMRDRTIEVWNRMI 138
I K G S + V +AL++ Y S G G V DA KLF++M +R WN M+
Sbjct: 142 HIEKLGLSSDIYVPNALIDCY---SRCGGLG------VRDAMKLFEKMSERDTVSWNSML 201
Query: 139 LVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVAKARELFERMPEKNIVSWTS 198
++ G++ AR+LFD M RD++SWNTM+ GY + R+++KA ELFE+MPE+N VSW++
Sbjct: 202 GGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWST 261
Query: 199 MIGAYAKAGDIITARMFFNKM--PQRNVVSWNSMVSSYVQHGDFQEARNLFIQMLSEGIT 258
M+ Y+KAGD+ AR+ F+KM P +NVV+W +++ Y + G +EA L QM++ G+
Sbjct: 262 MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK 321
Query: 259 PDRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLG--VIAATALIEMYAKCGDINRAFT 318
D +S+L+AC+ G L G IH ++ S LG AL++MYAKCG++ +AF
Sbjct: 322 FDAAAVISILAACTESGLLSLGMRIHSILKR-SNLGSNAYVLNALLDMYAKCGNLKKAFD 381
Query: 319 IFIKIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLKPNDFTFLGALFACSHGGM 378
+F I KD+ WN ML L +HG ++AI+L M++EG++P+ TF+ L +C+H G+
Sbjct: 382 VFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGL 441
Query: 379 TEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQMPFEPDVAIWGALL 438
+EG F +M+K + + P +EHYGC++DLL R GRL+EA+++V MP EP+V IWGALL
Sbjct: 442 IDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 501
Query: 439 GGCKLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVEHWQEALTAREKMEEENILK 498
G C++ ++ A+E+++ + KL + G + LSN+YA+ E W+ R KM+ + K
Sbjct: 502 GACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEK 558
Query: 499 KTGQSSV 502
+G SSV
Sbjct: 562 PSGASSV 558
BLAST of CmoCh18G012660 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 350.9 bits (899), Expect = 2.5e-95
Identity = 188/544 (34.56%), Postives = 295/544 (54.23%), Query Frame = 0
Query: 1 MDYASLVFSHLNPSFRTEVQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYV 60
+ YA VF + + WN M RG+A + + LY ++ GL P+++T+P+V
Sbjct: 84 LPYAISVFKTIQ---EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFV 143
Query: 61 LNSCADLGWFWDGKKVHCRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDAR 120
L SCA F +G+++H ++K G L+ V +L+++Y V +G++ DA
Sbjct: 144 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMY-----------VQNGRLEDAH 203
Query: 121 KLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVAK 180
K+FD+ R + + +I Y G + A++LFD + +DVVSWN MISGY + + +
Sbjct: 204 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKE 263
Query: 181 ARELFERMPEKN----------IVS----------------W-------------TSMIG 240
A ELF+ M + N +VS W ++I
Sbjct: 264 ALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALID 323
Query: 241 AYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDFQEARNLFIQMLSEGITPDRYT 300
Y+K G++ TA F ++P ++V+SWN+++ Y ++EA LF +ML G TP+ T
Sbjct: 324 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 383
Query: 301 FVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVIAA----TALIEMYAKCGDINRAFTIFI 360
+S+L AC+HLG ++ G+WIH ID + GV A T+LI+MYAKCGDI A +F
Sbjct: 384 MLSILPACAHLGAIDIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFN 443
Query: 361 KIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLKPNDFTFLGALFACSHGGMTEE 420
I K + WN M+ A+HG+A + L M+K G++P+D TF+G L ACSH GM +
Sbjct: 444 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 503
Query: 421 GQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQMPFEPDVAIWGALLGGC 480
G+ IF M +++ ++P +EHYGC+IDLL +G +EA +++ M EPD IW +LL C
Sbjct: 504 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC 563
Query: 481 KLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVEHWQEALTAREKMEEENILKKTG 502
K+ + + E E + K+ G +V LSN+YAS W E R + ++ + K G
Sbjct: 564 KMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 612
BLAST of CmoCh18G012660 vs. ExPASy Swiss-Prot
Match:
Q9FHR3 (Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E37 PE=3 SV=1)
HSP 1 Score: 337.4 bits (864), Expect = 2.8e-91
Identity = 168/504 (33.33%), Postives = 293/504 (58.13%), Query Frame = 0
Query: 1 MDYASLVFSHLNPSFRTEVQFWNAMIRGYAFNGPVEKSASLYGELLQRGL-KPHNFTYPY 60
+ Y+S VF + PS T WN +I+GY+ ++ S+ +++ GL +P +T+P
Sbjct: 59 LSYSSSVFERV-PSPGT--YLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPL 118
Query: 61 VLNSCADLGWFWDGKKVHCRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDA 120
V+ C++ G G VH +++ GF + V + ++ Y K +L + A
Sbjct: 119 VMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDL-----------FSA 178
Query: 121 RKLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVA 180
RK+F EM +R W +++ Y+++G++ A+ +FD M +R++ SWN ++ G VK D+
Sbjct: 179 RKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLV 238
Query: 181 KARELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGD 240
A++LF+ MP+++I+S+TSMI YAK GD+++AR F + +V +W++++ Y Q+G
Sbjct: 239 NAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQ 298
Query: 241 FQEARNLFIQMLSEGITPDRYTFVSVLSACSHLGDLEF----GKWIHYLIDDFSQLGVIA 300
EA +F +M ++ + PD + V ++SACS +G E ++H ++ FS V+
Sbjct: 299 PNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV- 358
Query: 301 ATALIEMYAKCGDINRAFTIFIKIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGL 360
ALI+M AKCG ++RA +F ++ +D+ + M++ +A+HG +AI+L M EG+
Sbjct: 359 -PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGI 418
Query: 361 KPNDFTFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEAL 420
P++ F L C + EEG F+ M+K++ I + +HY C+++LLSR G+L+EA
Sbjct: 419 VPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAY 478
Query: 421 RIVDQMPFEPDVAIWGALLGGCKLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVE 480
++ MPFE + WG+LLGGC L + + AE + + +L G +V LSN+YA+++
Sbjct: 479 ELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALD 538
Query: 481 HWQEALTAREKMEEENILKKTGQS 500
W + R+KM E I K G+S
Sbjct: 539 RWTDVAHLRDKMNENGITKICGRS 546
BLAST of CmoCh18G012660 vs. ExPASy Swiss-Prot
Match:
Q9MA95 (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E82 PE=3 SV=2)
HSP 1 Score: 337.0 bits (863), Expect = 3.7e-91
Identity = 187/523 (35.76%), Postives = 283/523 (54.11%), Query Frame = 0
Query: 1 MDYASLVFSHLN-PSFRTEVQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPY 60
+ YA VF ++ PS V WN+MIRGY+ + +K+ Y E+L++G P FT+PY
Sbjct: 57 LSYARSVFESIDCPS----VYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPY 116
Query: 61 VLNSCADLGWFWDGKKVHCRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDA 120
VL +C+ L G VH ++KTGF +N VS LL++Y+ G+V
Sbjct: 117 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYM-----------CCGEVNYG 176
Query: 121 RKLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYV----KV 180
++F+++ + W +I ++ A + F M+ V + T++ + +
Sbjct: 177 LRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRC 236
Query: 181 RDVAKAR------------ELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRN 240
+D+ + F+ N++ TS+I YAK GD+ TAR F+ MP+R
Sbjct: 237 KDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERT 296
Query: 241 VVSWNSMVSSYVQHGDFQEARNLFIQMLSEGITPDRYTFVSVLSACSHLGDLEFGKWIHY 300
+VSWNS+++ Y Q+GD +EA +F+ ML GI PD+ TF+SV+ A G + G+ IH
Sbjct: 297 LVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHA 356
Query: 301 LIDDFSQLGVI----AATALIEMYAKCGDINRAFTIFIKIGTKDVFCWNVMLKSLALHGK 360
+ S+ G + AL+ MYAK GD A F + KD W V++ LA HG
Sbjct: 357 YV---SKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGH 416
Query: 361 AQDAIKLLYLMQKEG-LKPNDFTFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHY 420
+A+ + MQ++G P+ T+LG L+ACSH G+ EEGQ F M+ HG+ PT+EHY
Sbjct: 417 GNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHY 476
Query: 421 GCVIDLLSRNGRLEEALRIVDQMPFEPDVAIWGALLGGCKLTSDFKRAEEIVERVRKLRS 480
GC++D+LSR GR EEA R+V MP +P+V IWGALL GC + + + + I V +
Sbjct: 477 GCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEE 536
Query: 481 NEGGIHVSLSNMYASVEHWQEALTAREKMEEENILKKTGQSSV 502
GI+V LSN+YA W + RE M+ + + K G SSV
Sbjct: 537 LGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
BLAST of CmoCh18G012660 vs. ExPASy Swiss-Prot
Match:
O22137 (Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR4 PE=1 SV=2)
HSP 1 Score: 328.6 bits (841), Expect = 1.3e-88
Identity = 179/503 (35.59%), Postives = 276/503 (54.87%), Query Frame = 0
Query: 22 WNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYVLNSCADLGWFWDGKKVHCRII 81
WNA+I+ ++ ++ L +L+ G+ F+ VL +C+ LG+ G ++H +
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 82 KTGFSLNYSVSDALLNLYLKISELS--------------------GPGVVSDGKVWDARK 141
KTG + + + L+ LYLK L G V G + AR+
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 142 LFD--EMRDRTIEVWNRMILVYMRTGD-VYGARQLFDSMEDRDVVSWNTMISGYVKVRDV 201
LFD M + + WN MI Y +T D V A +LF M ++D++SWN+MI GYVK +
Sbjct: 209 LFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRI 268
Query: 202 AKARELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHG 261
A+ LF+ MP +++V+W +MI YAK G + A+ F++MP R+VV++NSM++ YVQ+
Sbjct: 269 EDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK 328
Query: 262 DFQEARNLFIQMLSEG-ITPDRYTFVSVLSACSHLGDLEFGKWIH-YLIDDFSQLGVIAA 321
EA +F M E + PD T V VL A + LG L +H Y+++ LG
Sbjct: 329 YHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLG 388
Query: 322 TALIEMYAKCGDINRAFTIFIKIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLK 381
ALI+MY+KCG I A +F I K + WN M+ LA+HG + A +L +++ LK
Sbjct: 389 VALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLK 448
Query: 382 PNDFTFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALR 441
P+D TF+G L ACSH G+ +EG + F+ M+++H I P ++HYGC++D+LSR+G +E A
Sbjct: 449 PDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKN 508
Query: 442 IVDQMPFEPDVAIWGALLGGCKLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVEH 500
++++MP EP+ IW L C +F+ E + + + +V LSNMYAS
Sbjct: 509 LIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGM 568
BLAST of CmoCh18G012660 vs. ExPASy TrEMBL
Match:
A0A6J1FZ38 (pentatricopeptide repeat-containing protein At3g29230-like OS=Cucurbita moschata OX=3662 GN=LOC111449234 PE=4 SV=1)
HSP 1 Score: 1070.8 bits (2768), Expect = 1.7e-309
Identity = 518/518 (100.00%), Postives = 518/518 (100.00%), Query Frame = 0
Query: 1 MDYASLVFSHLNPSFRTEVQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYV 60
MDYASLVFSHLNPSFRTEVQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYV
Sbjct: 53 MDYASLVFSHLNPSFRTEVQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYV 112
Query: 61 LNSCADLGWFWDGKKVHCRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDAR 120
LNSCADLGWFWDGKKVHCRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDAR
Sbjct: 113 LNSCADLGWFWDGKKVHCRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDAR 172
Query: 121 KLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVAK 180
KLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVAK
Sbjct: 173 KLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVAK 232
Query: 181 ARELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDF 240
ARELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDF
Sbjct: 233 ARELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDF 292
Query: 241 QEARNLFIQMLSEGITPDRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVIAATALI 300
QEARNLFIQMLSEGITPDRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVIAATALI
Sbjct: 293 QEARNLFIQMLSEGITPDRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVIAATALI 352
Query: 301 EMYAKCGDINRAFTIFIKIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLKPNDF 360
EMYAKCGDINRAFTIFIKIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLKPNDF
Sbjct: 353 EMYAKCGDINRAFTIFIKIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLKPNDF 412
Query: 361 TFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQ 420
TFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQ
Sbjct: 413 TFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQ 472
Query: 421 MPFEPDVAIWGALLGGCKLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVEHWQEA 480
MPFEPDVAIWGALLGGCKLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVEHWQEA
Sbjct: 473 MPFEPDVAIWGALLGGCKLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVEHWQEA 532
Query: 481 LTAREKMEEENILKKTGQSSVIYAPCGSSTFTRLLSRG 519
LTAREKMEEENILKKTGQSSVIYAPCGSSTFTRLLSRG
Sbjct: 533 LTAREKMEEENILKKTGQSSVIYAPCGSSTFTRLLSRG 570
BLAST of CmoCh18G012660 vs. ExPASy TrEMBL
Match:
A0A6J1HXE5 (pentatricopeptide repeat-containing protein At3g29230-like OS=Cucurbita maxima OX=3661 GN=LOC111467521 PE=4 SV=1)
HSP 1 Score: 1022.7 bits (2643), Expect = 5.4e-295
Identity = 493/513 (96.10%), Postives = 501/513 (97.66%), Query Frame = 0
Query: 1 MDYASLVFSHLNPSFRTEVQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYV 60
MDYA LVFSHLNPSFRTEVQFWNAM+RGYAFNGPVEKS SLYGELLQRGLKPHNFTYPYV
Sbjct: 54 MDYAILVFSHLNPSFRTEVQFWNAMVRGYAFNGPVEKSVSLYGELLQRGLKPHNFTYPYV 113
Query: 61 LNSCADLGWFWDGKKVHCRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDAR 120
LNSCADLGWFWDGKKVHCRIIKTGFSLN SVSDALLNLYLKISE SGPGVVSDGKVWDAR
Sbjct: 114 LNSCADLGWFWDGKKVHCRIIKTGFSLNCSVSDALLNLYLKISEFSGPGVVSDGKVWDAR 173
Query: 121 KLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVAK 180
KLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRD+VSWNTMISGYVKV+DV K
Sbjct: 174 KLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDIVSWNTMISGYVKVQDVVK 233
Query: 181 ARELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDF 240
ARELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDF
Sbjct: 234 ARELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDF 293
Query: 241 QEARNLFIQMLSEGITPDRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVIAATALI 300
QEARNLFIQMLSEGITPDRYTFVSVLSACSHLGDLEFGKWIHYLIDD SQLGVIAATALI
Sbjct: 294 QEARNLFIQMLSEGITPDRYTFVSVLSACSHLGDLEFGKWIHYLIDDVSQLGVIAATALI 353
Query: 301 EMYAKCGDINRAFTIFIKIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLKPNDF 360
EMYAKCGDINRAFTIFIKIG KDVFCWNVMLKSLALHGKAQDAIKLL LMQKEGLKPNDF
Sbjct: 354 EMYAKCGDINRAFTIFIKIGMKDVFCWNVMLKSLALHGKAQDAIKLLSLMQKEGLKPNDF 413
Query: 361 TFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQ 420
TFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVD+
Sbjct: 414 TFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDR 473
Query: 421 MPFEPDVAIWGALLGGCKLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVEHWQEA 480
MPFEPD+AIWGALLGGCKL SDFKRAE+IVERVRKLRS EGGIHVSLSNMYASVEHWQEA
Sbjct: 474 MPFEPDIAIWGALLGGCKLRSDFKRAEDIVERVRKLRSKEGGIHVSLSNMYASVEHWQEA 533
Query: 481 LTAREKMEEENILKKTGQSSVIYAPCGSSTFTR 514
L+AREKMEEENILK+TGQSSVIYA GSSTFTR
Sbjct: 534 LSAREKMEEENILKRTGQSSVIYASRGSSTFTR 566
BLAST of CmoCh18G012660 vs. ExPASy TrEMBL
Match:
A0A6J1CIY5 (pentatricopeptide repeat-containing protein At3g29230-like OS=Momordica charantia OX=3673 GN=LOC111011418 PE=4 SV=1)
HSP 1 Score: 886.7 bits (2290), Expect = 4.6e-254
Identity = 423/506 (83.60%), Postives = 457/506 (90.32%), Query Frame = 0
Query: 1 MDYASLVFSHLNPSFRTEVQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYV 60
MDYASLVFSHL P FRTE+QFWNAMIRGYAFNGP EK SLY ELLQRGLKPHNFTYP+V
Sbjct: 53 MDYASLVFSHLTPGFRTEIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFV 112
Query: 61 LNSCADLGWFWDGKKVHCRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDAR 120
LNSC DLG F DG+ VHCRI+KTGFS ++SVS+ALLNLYLK+ E GPG+V+ GKV DAR
Sbjct: 113 LNSCTDLGRFRDGENVHCRILKTGFSSSFSVSNALLNLYLKLPEFPGPGIVTGGKVSDAR 172
Query: 121 KLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVAK 180
K+FDEM RT+EV NRM+ Y GDV ARQLFD+MEDRD+++WNTMISGYVKVR+V K
Sbjct: 173 KVFDEMCVRTVEVCNRMMAGYTSAGDVNNARQLFDNMEDRDIITWNTMISGYVKVREVVK 232
Query: 181 ARELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDF 240
ARELFER+PE N+VSWT MIG YAKAGD+ITARMFFNKMPQRNVVSWNSMVSSYVQ G+F
Sbjct: 233 ARELFERIPENNVVSWTLMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNF 292
Query: 241 QEARNLFIQMLSEGITPDRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVIAATALI 300
QEA +LFI+M SEG+TPD YTFVSVLSACSHLGDLEFGKWIHYLI+DFSQLGVIAATALI
Sbjct: 293 QEAVDLFIEMRSEGVTPDGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALI 352
Query: 301 EMYAKCGDINRAFTIFIKIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLKPNDF 360
EMYAKCGDINRAF +FIKIG KDVFCWNVMLKSLALHGK+ DAIKL LMQKEGLKPNDF
Sbjct: 353 EMYAKCGDINRAFILFIKIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDF 412
Query: 361 TFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQ 420
TFLGALFACSHGGM EEGQ IFDNM+KE GISPTIEH+GCVIDLLSRNGRLEEAL++VD+
Sbjct: 413 TFLGALFACSHGGMVEEGQSIFDNMEKECGISPTIEHFGCVIDLLSRNGRLEEALQLVDK 472
Query: 421 MPFEPDVAIWGALLGGCKLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVEHWQEA 480
MPFEPDVAIWGALLGGCKL SDFKRA EIVER KLRSNEGGIH SLSNMYAS+EHW EA
Sbjct: 473 MPFEPDVAIWGALLGGCKLRSDFKRAGEIVERASKLRSNEGGIHASLSNMYASIEHWPEA 532
Query: 481 LTAREKMEEENILKKTGQSSVIYAPC 507
L AREKMEEENILKKTGQSSVIYAPC
Sbjct: 533 LIAREKMEEENILKKTGQSSVIYAPC 558
BLAST of CmoCh18G012660 vs. ExPASy TrEMBL
Match:
A0A5D3DH88 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00130 PE=4 SV=1)
HSP 1 Score: 867.8 bits (2241), Expect = 2.2e-248
Identity = 412/509 (80.94%), Postives = 451/509 (88.61%), Query Frame = 0
Query: 1 MDYASLVFSHLNPSFRTEVQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYV 60
MDYA+LVFSHLNPSF+TE+QFWNAMIRGYAFNGP +S SLYG+LLQRGLKPH+FTYP+V
Sbjct: 1 MDYANLVFSHLNPSFKTEIQFWNAMIRGYAFNGPAHQSLSLYGDLLQRGLKPHSFTYPFV 60
Query: 61 LNSCADLGWFWDGKKVHCRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDAR 120
L SCADLGWFWDGKKVHCRI+KTGFSLN SVSDAL NLY+ S+ +GP +DG DAR
Sbjct: 61 LKSCADLGWFWDGKKVHCRILKTGFSLNSSVSDALFNLYVNFSKFTGPKDAADGMASDAR 120
Query: 121 KLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVAK 180
K+FDEM R++EVWNRMIL Y GDV GA++LFD+MEDRD VSWNTM+SGY+KV +V K
Sbjct: 121 KVFDEMCVRSVEVWNRMILRYTSAGDVSGAQKLFDTMEDRDTVSWNTMLSGYIKVGEVMK 180
Query: 181 ARELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDF 240
ARELFE+MPEKN+VSWTSMI AYAKAGD+ TARMFFNKMPQRNVVSWNSM+SSYVQHGDF
Sbjct: 181 ARELFEKMPEKNVVSWTSMISAYAKAGDLATARMFFNKMPQRNVVSWNSMISSYVQHGDF 240
Query: 241 QEARNLFIQMLSEGITPDRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVIAATALI 300
QEA +LFIQMLSEGI+PD YTFVSV SACSHLGDL FG IHYLIDDFSQLGVIAATALI
Sbjct: 241 QEALDLFIQMLSEGISPDGYTFVSVFSACSHLGDLTFGTRIHYLIDDFSQLGVIAATALI 300
Query: 301 EMYAKCGDINRAFTIFIKIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLKPNDF 360
EMYAKCGDINRAF +FIKIG KDVF WNVMLKSLALHG+AQDA+KL LMQK+GLKPNDF
Sbjct: 301 EMYAKCGDINRAFNLFIKIGKKDVFFWNVMLKSLALHGQAQDALKLFSLMQKQGLKPNDF 360
Query: 361 TFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQ 420
TFLGALFACSHGGM EEGQ IFD M+KE+ I P IEH+GC++DLLSRNGRLEEAL +VD+
Sbjct: 361 TFLGALFACSHGGMVEEGQTIFDMMEKEYKIRPRIEHFGCIVDLLSRNGRLEEALDVVDK 420
Query: 421 MPFEPDVAIWGALLGGCKLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVEHWQEA 480
MPFE DVAIWGALLGGCKL DFKRA EIVER RKLRS EGGIHVS SNMYASVE W EA
Sbjct: 421 MPFEADVAIWGALLGGCKLRGDFKRAGEIVERARKLRSKEGGIHVSFSNMYASVEQWAEA 480
Query: 481 LTAREKMEEENILKKTGQSSVIYAPCGSS 510
+ AREKME ENILKKTGQSSVIYAP G S
Sbjct: 481 VNAREKMENENILKKTGQSSVIYAPNGRS 509
BLAST of CmoCh18G012660 vs. ExPASy TrEMBL
Match:
A0A1S3AZC1 (pentatricopeptide repeat-containing protein At3g29230-like OS=Cucumis melo OX=3656 GN=LOC103484215 PE=4 SV=1)
HSP 1 Score: 778.5 bits (2009), Expect = 1.8e-221
Identity = 365/452 (80.75%), Postives = 403/452 (89.16%), Query Frame = 0
Query: 1 MDYASLVFSHLNPSFRTEVQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYV 60
MDYA+LVFSHLNPSF+TE+QFWNAMIRGYAFNGP +S SLYG+LLQRGLKPH+FTYP+V
Sbjct: 1 MDYANLVFSHLNPSFKTEIQFWNAMIRGYAFNGPAHQSLSLYGDLLQRGLKPHSFTYPFV 60
Query: 61 LNSCADLGWFWDGKKVHCRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDAR 120
L SCADLGWFWDGKKVHCRI+KTGFSLN SVSDAL NLY+ S+ +GP +DG DAR
Sbjct: 61 LKSCADLGWFWDGKKVHCRILKTGFSLNSSVSDALFNLYVNFSKFTGPKDAADGMASDAR 120
Query: 121 KLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVAK 180
K+FDEM R++EVWNRMIL Y GDV GA++LFD+MEDRD VSWNTM+SGY+KV +V K
Sbjct: 121 KVFDEMCVRSVEVWNRMILRYTSAGDVSGAQKLFDTMEDRDTVSWNTMLSGYIKVGEVMK 180
Query: 181 ARELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDF 240
ARELFE+MPEKN+VSWTSMI AYAKAGD+ TARMFFNKMPQRNVVSWNSM+SSYVQHGDF
Sbjct: 181 ARELFEKMPEKNVVSWTSMISAYAKAGDLATARMFFNKMPQRNVVSWNSMISSYVQHGDF 240
Query: 241 QEARNLFIQMLSEGITPDRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVIAATALI 300
QEA +LFIQMLSEGI+PD YTFVSV SACSHLGDL FG IHYLIDDFSQLGVIAATALI
Sbjct: 241 QEALDLFIQMLSEGISPDGYTFVSVFSACSHLGDLTFGTRIHYLIDDFSQLGVIAATALI 300
Query: 301 EMYAKCGDINRAFTIFIKIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLKPNDF 360
EMYAKCGDINRAF +FIKIG KDVF WNVMLKSLALHG+AQDA+KL LMQK+GLKPNDF
Sbjct: 301 EMYAKCGDINRAFNLFIKIGKKDVFFWNVMLKSLALHGQAQDALKLFSLMQKQGLKPNDF 360
Query: 361 TFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQ 420
TFLGALFACSHGGM EEGQ IFD M+KE+ I P IEH+GC++DLLSRNGRLEEAL +VD+
Sbjct: 361 TFLGALFACSHGGMVEEGQTIFDMMEKEYKIRPRIEHFGCIVDLLSRNGRLEEALDVVDK 420
Query: 421 MPFEPDVAIWGALLGGCKLTSDFKRAEEIVER 453
MPFE DVAIWGALLGGCKL DFKRA EIVER
Sbjct: 421 MPFEADVAIWGALLGGCKLRGDFKRAGEIVER 452
BLAST of CmoCh18G012660 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 397.5 bits (1020), Expect = 1.6e-110
Identity = 196/487 (40.25%), Postives = 305/487 (62.63%), Query Frame = 0
Query: 19 VQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYVLNSCADLGWFWDGKKVHC 78
V N++IR +A N ++ ++ E+ + GL NFTYP++L +C+ W K +H
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHN 141
Query: 79 RIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDARKLFDEMRDRTIEVWNRMI 138
I K G S + V +AL++ Y S G G V DA KLF++M +R WN M+
Sbjct: 142 HIEKLGLSSDIYVPNALIDCY---SRCGGLG------VRDAMKLFEKMSERDTVSWNSML 201
Query: 139 LVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVAKARELFERMPEKNIVSWTS 198
++ G++ AR+LFD M RD++SWNTM+ GY + R+++KA ELFE+MPE+N VSW++
Sbjct: 202 GGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWST 261
Query: 199 MIGAYAKAGDIITARMFFNKM--PQRNVVSWNSMVSSYVQHGDFQEARNLFIQMLSEGIT 258
M+ Y+KAGD+ AR+ F+KM P +NVV+W +++ Y + G +EA L QM++ G+
Sbjct: 262 MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK 321
Query: 259 PDRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLG--VIAATALIEMYAKCGDINRAFT 318
D +S+L+AC+ G L G IH ++ S LG AL++MYAKCG++ +AF
Sbjct: 322 FDAAAVISILAACTESGLLSLGMRIHSILKR-SNLGSNAYVLNALLDMYAKCGNLKKAFD 381
Query: 319 IFIKIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLKPNDFTFLGALFACSHGGM 378
+F I KD+ WN ML L +HG ++AI+L M++EG++P+ TF+ L +C+H G+
Sbjct: 382 VFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGL 441
Query: 379 TEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQMPFEPDVAIWGALL 438
+EG F +M+K + + P +EHYGC++DLL R GRL+EA+++V MP EP+V IWGALL
Sbjct: 442 IDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 501
Query: 439 GGCKLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVEHWQEALTAREKMEEENILK 498
G C++ ++ A+E+++ + KL + G + LSN+YA+ E W+ R KM+ + K
Sbjct: 502 GACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEK 558
Query: 499 KTGQSSV 502
+G SSV
Sbjct: 562 PSGASSV 558
BLAST of CmoCh18G012660 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 350.9 bits (899), Expect = 1.7e-96
Identity = 188/544 (34.56%), Postives = 295/544 (54.23%), Query Frame = 0
Query: 1 MDYASLVFSHLNPSFRTEVQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYV 60
+ YA VF + + WN M RG+A + + LY ++ GL P+++T+P+V
Sbjct: 84 LPYAISVFKTIQ---EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFV 143
Query: 61 LNSCADLGWFWDGKKVHCRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDAR 120
L SCA F +G+++H ++K G L+ V +L+++Y V +G++ DA
Sbjct: 144 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMY-----------VQNGRLEDAH 203
Query: 121 KLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVAK 180
K+FD+ R + + +I Y G + A++LFD + +DVVSWN MISGY + + +
Sbjct: 204 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKE 263
Query: 181 ARELFERMPEKN----------IVS----------------W-------------TSMIG 240
A ELF+ M + N +VS W ++I
Sbjct: 264 ALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALID 323
Query: 241 AYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDFQEARNLFIQMLSEGITPDRYT 300
Y+K G++ TA F ++P ++V+SWN+++ Y ++EA LF +ML G TP+ T
Sbjct: 324 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 383
Query: 301 FVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVIAA----TALIEMYAKCGDINRAFTIFI 360
+S+L AC+HLG ++ G+WIH ID + GV A T+LI+MYAKCGDI A +F
Sbjct: 384 MLSILPACAHLGAIDIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFN 443
Query: 361 KIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLKPNDFTFLGALFACSHGGMTEE 420
I K + WN M+ A+HG+A + L M+K G++P+D TF+G L ACSH GM +
Sbjct: 444 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 503
Query: 421 GQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQMPFEPDVAIWGALLGGC 480
G+ IF M +++ ++P +EHYGC+IDLL +G +EA +++ M EPD IW +LL C
Sbjct: 504 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC 563
Query: 481 KLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVEHWQEALTAREKMEEENILKKTG 502
K+ + + E E + K+ G +V LSN+YAS W E R + ++ + K G
Sbjct: 564 KMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 612
BLAST of CmoCh18G012660 vs. TAIR 10
Match:
AT5G37570.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 337.4 bits (864), Expect = 2.0e-92
Identity = 168/504 (33.33%), Postives = 293/504 (58.13%), Query Frame = 0
Query: 1 MDYASLVFSHLNPSFRTEVQFWNAMIRGYAFNGPVEKSASLYGELLQRGL-KPHNFTYPY 60
+ Y+S VF + PS T WN +I+GY+ ++ S+ +++ GL +P +T+P
Sbjct: 59 LSYSSSVFERV-PSPGT--YLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPL 118
Query: 61 VLNSCADLGWFWDGKKVHCRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDA 120
V+ C++ G G VH +++ GF + V + ++ Y K +L + A
Sbjct: 119 VMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDL-----------FSA 178
Query: 121 RKLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVA 180
RK+F EM +R W +++ Y+++G++ A+ +FD M +R++ SWN ++ G VK D+
Sbjct: 179 RKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLV 238
Query: 181 KARELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGD 240
A++LF+ MP+++I+S+TSMI YAK GD+++AR F + +V +W++++ Y Q+G
Sbjct: 239 NAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQ 298
Query: 241 FQEARNLFIQMLSEGITPDRYTFVSVLSACSHLGDLEF----GKWIHYLIDDFSQLGVIA 300
EA +F +M ++ + PD + V ++SACS +G E ++H ++ FS V+
Sbjct: 299 PNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV- 358
Query: 301 ATALIEMYAKCGDINRAFTIFIKIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGL 360
ALI+M AKCG ++RA +F ++ +D+ + M++ +A+HG +AI+L M EG+
Sbjct: 359 -PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGI 418
Query: 361 KPNDFTFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEAL 420
P++ F L C + EEG F+ M+K++ I + +HY C+++LLSR G+L+EA
Sbjct: 419 VPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAY 478
Query: 421 RIVDQMPFEPDVAIWGALLGGCKLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVE 480
++ MPFE + WG+LLGGC L + + AE + + +L G +V LSN+YA+++
Sbjct: 479 ELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALD 538
Query: 481 HWQEALTAREKMEEENILKKTGQS 500
W + R+KM E I K G+S
Sbjct: 539 RWTDVAHLRDKMNENGITKICGRS 546
BLAST of CmoCh18G012660 vs. TAIR 10
Match:
AT3G05240.1 (mitochondrial editing factor 19 )
HSP 1 Score: 337.0 bits (863), Expect = 2.6e-92
Identity = 187/523 (35.76%), Postives = 283/523 (54.11%), Query Frame = 0
Query: 1 MDYASLVFSHLN-PSFRTEVQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPY 60
+ YA VF ++ PS V WN+MIRGY+ + +K+ Y E+L++G P FT+PY
Sbjct: 57 LSYARSVFESIDCPS----VYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPY 116
Query: 61 VLNSCADLGWFWDGKKVHCRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDA 120
VL +C+ L G VH ++KTGF +N VS LL++Y+ G+V
Sbjct: 117 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYM-----------CCGEVNYG 176
Query: 121 RKLFDEMRDRTIEVWNRMILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYV----KV 180
++F+++ + W +I ++ A + F M+ V + T++ + +
Sbjct: 177 LRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRC 236
Query: 181 RDVAKAR------------ELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRN 240
+D+ + F+ N++ TS+I YAK GD+ TAR F+ MP+R
Sbjct: 237 KDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERT 296
Query: 241 VVSWNSMVSSYVQHGDFQEARNLFIQMLSEGITPDRYTFVSVLSACSHLGDLEFGKWIHY 300
+VSWNS+++ Y Q+GD +EA +F+ ML GI PD+ TF+SV+ A G + G+ IH
Sbjct: 297 LVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHA 356
Query: 301 LIDDFSQLGVI----AATALIEMYAKCGDINRAFTIFIKIGTKDVFCWNVMLKSLALHGK 360
+ S+ G + AL+ MYAK GD A F + KD W V++ LA HG
Sbjct: 357 YV---SKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGH 416
Query: 361 AQDAIKLLYLMQKEG-LKPNDFTFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHY 420
+A+ + MQ++G P+ T+LG L+ACSH G+ EEGQ F M+ HG+ PT+EHY
Sbjct: 417 GNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHY 476
Query: 421 GCVIDLLSRNGRLEEALRIVDQMPFEPDVAIWGALLGGCKLTSDFKRAEEIVERVRKLRS 480
GC++D+LSR GR EEA R+V MP +P+V IWGALL GC + + + + I V +
Sbjct: 477 GCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEE 536
Query: 481 NEGGIHVSLSNMYASVEHWQEALTAREKMEEENILKKTGQSSV 502
GI+V LSN+YA W + RE M+ + + K G SSV
Sbjct: 537 LGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
BLAST of CmoCh18G012660 vs. TAIR 10
Match:
AT2G45350.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 328.6 bits (841), Expect = 9.3e-90
Identity = 179/503 (35.59%), Postives = 276/503 (54.87%), Query Frame = 0
Query: 22 WNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYVLNSCADLGWFWDGKKVHCRII 81
WNA+I+ ++ ++ L +L+ G+ F+ VL +C+ LG+ G ++H +
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 82 KTGFSLNYSVSDALLNLYLKISELS--------------------GPGVVSDGKVWDARK 141
KTG + + + L+ LYLK L G V G + AR+
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 142 LFD--EMRDRTIEVWNRMILVYMRTGD-VYGARQLFDSMEDRDVVSWNTMISGYVKVRDV 201
LFD M + + WN MI Y +T D V A +LF M ++D++SWN+MI GYVK +
Sbjct: 209 LFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRI 268
Query: 202 AKARELFERMPEKNIVSWTSMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHG 261
A+ LF+ MP +++V+W +MI YAK G + A+ F++MP R+VV++NSM++ YVQ+
Sbjct: 269 EDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK 328
Query: 262 DFQEARNLFIQMLSEG-ITPDRYTFVSVLSACSHLGDLEFGKWIH-YLIDDFSQLGVIAA 321
EA +F M E + PD T V VL A + LG L +H Y+++ LG
Sbjct: 329 YHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLG 388
Query: 322 TALIEMYAKCGDINRAFTIFIKIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLK 381
ALI+MY+KCG I A +F I K + WN M+ LA+HG + A +L +++ LK
Sbjct: 389 VALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLK 448
Query: 382 PNDFTFLGALFACSHGGMTEEGQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALR 441
P+D TF+G L ACSH G+ +EG + F+ M+++H I P ++HYGC++D+LSR+G +E A
Sbjct: 449 PDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKN 508
Query: 442 IVDQMPFEPDVAIWGALLGGCKLTSDFKRAEEIVERVRKLRSNEGGIHVSLSNMYASVEH 500
++++MP EP+ IW L C +F+ E + + + +V LSNMYAS
Sbjct: 509 LIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGM 568
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LS72 | 2.3e-109 | 40.25 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 2.5e-95 | 34.56 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9FHR3 | 2.8e-91 | 33.33 | Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis th... | [more] |
Q9MA95 | 3.7e-91 | 35.76 | Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis th... | [more] |
O22137 | 1.3e-88 | 35.59 | Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FZ38 | 1.7e-309 | 100.00 | pentatricopeptide repeat-containing protein At3g29230-like OS=Cucurbita moschata... | [more] |
A0A6J1HXE5 | 5.4e-295 | 96.10 | pentatricopeptide repeat-containing protein At3g29230-like OS=Cucurbita maxima O... | [more] |
A0A6J1CIY5 | 4.6e-254 | 83.60 | pentatricopeptide repeat-containing protein At3g29230-like OS=Momordica charanti... | [more] |
A0A5D3DH88 | 2.2e-248 | 80.94 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3AZC1 | 1.8e-221 | 80.75 | pentatricopeptide repeat-containing protein At3g29230-like OS=Cucumis melo OX=36... | [more] |
Match Name | E-value | Identity | Description | |
AT3G29230.1 | 1.6e-110 | 40.25 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 1.7e-96 | 34.56 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G37570.1 | 2.0e-92 | 33.33 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT3G05240.1 | 2.6e-92 | 35.76 | mitochondrial editing factor 19 | [more] |
AT2G45350.1 | 9.3e-90 | 35.59 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |