CmoCh18G012380 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATGGAAGGAAAGAAGATCCGAGTTAATAATAGGGAAGGTGTTTGAGTAAAATGGAGGAGAGGAGAGAAGAGGATGAATGGGTGCAGGTGTCAATCAGTAGGAAGGCGAAGATCATCAGCTCACATCACCACCACTCTTTCCCCCTCCGCCTTTGATTTCCCCATTTTCCATTTCTAAATTCTCTATCCCTTCTGTTCTTCATCTCTTCCTCCCTCGCCTCCAATCCAATCCAATCCAATCCTCTCCTCTCTGTTTCTCAACAATCCCTTTACTCTGTGATTCATGAAACCTTTCCTCTTTAACAATCTTCACTCTCTTCACTCTTATTATTGACTCCTTTTCACTTTCCACCCCATCTCATGGCCCTTCTCTTTCCTCTCCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCCTCCCCTACACGCCAGCCCCGGCGACTCTGATCCACTTTACAAGTAATTCCCACTTCATTTCGTTCTTCTGCGTGCCGTTTTGATTTGGGTTTTATTCGGGTCCTCATTTTCAGTTTGCCCTTTTTACGCTTCTCCCGTTAATGGGTATTTTCATTTTCAAATTATTGCTTGCTCCTTGCTCCTGATTGCCGAATGATGCTGGGAACTTTGTTTTTTATTTATTCAAATAAAAGGGGTTGCTCTGTGGTTGTGTGATAATCAACGCATGCAATGTTTTCTAATTCTGTGCTTCTTTATCCGTTCATTCTATTCTTCTACTACCTTTTACTCAGAAATTCGTCAGAGTTTTTAACGTTTTCATCCTTTTATTGTATACTAATTATTGGGTAAACTCCCAAATACTAAGTGCCCTCTTACCCACTGCCTGAATTTTCTCCCCTTTCTTTTTGCTTCAACTTTTGAAATTTTAGTTCACTAATTCAGCACCAATTCATCTTATTACAAGAAATTCGTCAGGTCTTGTTATTTGTGAACACTGTTTATTTAGGCACTAGCTTCAATGGGTAGGTATTAGATTAAGTCATTGAATTGGGTTTTGACCATTGATATTGGTTTGGATAAGAGTGTGAAGAAGGGGGTTTCATTTCCTTGTTCAGCAAACGTGCTGCTTATCTTCATGATTTCCTTGTCTATTATTGTTCAGGGATTGTGTGGTGCAGTGTGAGAAATCTGGATGCGCTGGTGACAAATGTTTTCAGCATTGTAAATTCTCATCTGATGGGAAGCCTGTGGATGGTCCATGGTATCTGCAGGAGCCTCTGTATCTTCGATGGAAACAGTGGGACTGCCAGACTGATTGCAGGTACCACTGCATGTTATCTAGGGAGGAAGAAAGAACAAATCTTGGTGGTGAGCCTGTCAAATACCATGGGAAATGGCCATTTAGGCGAGTCTATGGCATTCAGGTTTGCTCATTGAATTGGCCTAATTTCTAAATGAAATTCATCCCCATTGTGCTCTTCTTCTTCTGCTCATCTTGAACTTTTGCCATTGATATGATAGGAGCCAGTTGCAGTTGCTCTTGCCGCACTCAATCTTGCGGTGCAATTTCATGGCTGGATATCTTTTTTCCTTCTTCTAAACTACAAGCTTCCACTGAAGCCAAATAAGAAGACATATTATGAATATACTGGGCTGTGGCATATCTATGGCATCCTAGCCATGAATTCTTGGTTCTGGGATGCTGCATTTCACTGTAGGTAAGCTTTCTACAAGCTAAAATAACCTCTTGACATTACTGTTTTTTCAAAACATAGTCCTGAATTCTTCCTTAATTAATATGAATATGGCTAGTTGCCTTGTTATTATTAGCAAACTCAACATTTGTGCCCATCTTTCTACCCTACCGTAGGCTACTCTTTACAGTTCTAACTTACAACCTGCATTGCTATGGTGTTTGGAATTGAATTGTTTGTAGACATGTGGAGTTGACTGAGAAGCTGGATTATTCTTCAGCTGTGGCATTTACTGGGTTTTCCCTAATTGTAGCCATACTGCGAGCTCTTAATGTGAGGGATGAGGCTGCTAGAGTCATGGTCTCTGCTCCAATTATCTCATTCGTCACAACCCATATCTTGTATCTCAACTTCTATAAACTTGATCATGGTAATGCATCCATTTCTTAGACCGTATTTCTTGAACGCAGTTATATGATTCTGTTTGGAATGACTTTTCGACGCTTAGAAATACTTTTTTTAACACTCTTAGGAACTCTCTAAGAGTCACCGTTTCCCTGTTTTACATATTGTTCTCACCTACGTTGTTTGTCTCAATTAGACAACTTATTTCTCTGTCTGGTCCCTTCCTTGTATGTTATCAACTGTCTAAATGTCTTCCATGTTTGTTGTTCAATTATCAATATCCTTGCAAGGCTATGCAAAAGAAAATTTGAGGGTTAGCTTCTGTTGCCTCTAGTTCAGGTTGCTAGGTGATGTGTCCAAAGAGATGAATGGATCACTGGACTCCATCTCTCATTGTGTAACGACCCGCTTTTTGAGTCTGACGGTGATACATAACAAAGTAGGGCTAGACCTTCTCCATAGTAGTCACGTTTTAAAATTGTGAGGCTGACGGCAATACGTAACGGGCCAAAGCGGATAATATTTGCTAGCGGTGGGTTTGTGCTGTTACAAATAGTATTAGAGCCAGTCACCGGATGGTGCGATGAACTGATTGGCATAGGGCTAGACCCTCTTCATAGTAGACGCGTTTTAAAACTGTGAGGCTCACAGTGATACGTAACGGGCCAAAGCGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGTCACCGGACAGTGCAATGCATTGATTGGAGTAGGGCTAGACCCTCTCCATAGTAGGCGCATTTTAAAACCGATACGTAACGAGCTAAAGCGGACAATATCTGCTAGTGGTGAGCTTAGGCGGTTACAAATAGTATTAGAGCCAGTCACCGGACGGTGCGATGCACTGATCGGAATAGGGCTAGACCCTCTCCATAGTAGACGCGTTTTAAAATCGTAAAACTGACGACGATACGTAACGGGCCAAAATAAACAATATCTGCTAGCAGTGGGTTTGGGGTAATAACATATTTGTTGTTATGACTGGCTTAAATTGCTACATTTCAGGTCTGAATACTAAGGTCTGCCTGGTGATGGGCATTACTCAGCTTCTTGTTTGGGCAGCATGGGGCGTTGTTTCTCACCATCCGTCGCAATGGAAGCTGTGGGCATTAGTCTCGGGCGGTGCAGTTACGATGCTGTTGAAGGCATTCGATTTCCCTCCATATGGAGGATATGTGGATGCTCATGCACTCTGGCATGCTACTTCAATACCTCTTTCATATATATGGTGGAGTTTCGTGAGAGATGATGCTGAATTCATAACTTCTGGTGTTCTCAAGAAGGTGAAGTAGAATACGTGATGTTAATCAGATGGAGGAAATTCTGAAACCACTTTCATTTCAGTGTTAGTTAGTTCATCAACACTCTGGTAGGTTCCCTTGTTTTTCTGGTGTTGCTTGGCGATTAACAAAATGTTGCCCAGAAATGTTGTTTGTATAATGATATTTGCATATCAGGACCAATGAGTTTTGTTTTCTGTTCAGTCTGTGTTTCTTTTTTTTTTTTTTTTAACTTCTTGGTCCTGAGATATTTGTGGGTCAACAGATGAAAGCCCCTCAGCACCATGGCAGTTCTTCTCAATGTAAACATACAATATTTTGCTGATATCAACAGTTTGTGTTATTCAGTCTGTGATGCAGTTTGCACAATTTCTCCTTTGCTTAGCTTGCTTTGGAATATCATTTTCAAACCCAA TAATGGAAGGAAAGAAGATCCGAGTTAATAATAGGGAAGGTGTTTGAGTAAAATGGAGGAGAGGAGAGAAGAGGATGAATGGGTGCAGGTGTCAATCAGTAGGAAGGCGAAGATCATCAGCTCACATCACCACCACTCTTTCCCCCTCCGCCTTTGATTTCCCCATTTTCCATTTCTAAATTCTCTATCCCTTCTGTTCTTCATCTCTTCCTCCCTCGCCTCCAATCCAATCCAATCCAATCCTCTCCTCTCTGTTTCTCAACAATCCCTTTACTCTGTGATTCATGAAACCTTTCCTCTTTAACAATCTTCACTCTCTTCACTCTTATTATTGACTCCTTTTCACTTTCCACCCCATCTCATGGCCCTTCTCTTTCCTCTCCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCCTCCCCTACACGCCAGCCCCGGCGACTCTGATCCACTTTACAAGGATTGTGTGGTGCAGTGTGAGAAATCTGGATGCGCTGGTGACAAATGTTTTCAGCATTGTAAATTCTCATCTGATGGGAAGCCTGTGGATGGTCCATGGTATCTGCAGGAGCCTCTGTATCTTCGATGGAAACAGTGGGACTGCCAGACTGATTGCAGGTACCACTGCATGTTATCTAGGGAGGAAGAAAGAACAAATCTTGGTGGTGAGCCTGTCAAATACCATGGGAAATGGCCATTTAGGCGAGTCTATGGCATTCAGGAGCCAGTTGCAGTTGCTCTTGCCGCACTCAATCTTGCGGTGCAATTTCATGGCTGGATATCTTTTTTCCTTCTTCTAAACTACAAGCTTCCACTGAAGCCAAATAAGAAGACATATTATGAATATACTGGGCTGTGGCATATCTATGGCATCCTAGCCATGAATTCTTGGTTCTGGGATGCTGCATTTCACTGTAGACATGTGGAGTTGACTGAGAAGCTGGATTATTCTTCAGCTGTGGCATTTACTGGGTTTTCCCTAATTGTAGCCATACTGCGAGCTCTTAATGTGAGGGATGAGGCTGCTAGAGTCATGGTCTCTGCTCCAATTATCTCATTCGTCACAACCCATATCTTGTATCTCAACTTCTATAAACTTGATCATGGTAATGCATCCATTTCTTAGACCGTATTTCTTGAACGCAGTTATATGATTCTGTTTGGAATGACTTTTCGACGCTTAGAAATACTTTTTTTAACACTCTTAGGAACTCTCTAAGAGTCACCGTTTCCCTGTTTTACATATTGTTCTCACCTACGTTGTTTGTCTCAATTAGACAACTTATTTCTCTGTCTGGTCCCTTCCTTGTATGTTATCAACTGTCTAAATGTCTTCCATGTTTGTTGTTCAATTATCAATATCCTTGCAAGGCTATGCAAAAGAAAATTTGAGGGTTAGCTTCTGTTGCCTCTAGTTCAGGTTGCTAGGTGATGTGTCCAAAGAGATGAATGGATCACTGGACTCCATCTCTCATTGTGTAACGACCCGCTTTTTGAGTCTGACGGTGATACATAACAAAGTAGGGCTAGACCTTCTCCATAGTAGTCACGTTTTAAAATTGTGAGGCTGACGGCAATACGTAACGGGCCAAAGCGGATAATATTTGCTAGCGGTGGGTTTGTGCTGTTACAAATAGTATTAGAGCCAGTCACCGGATGGTGCGATGAACTGATTGGCATAGGGCTAGACCCTCTTCATAGTAGACGCGTTTTAAAACTGTGAGGCTCACAGTGATACGTAACGGGCCAAAGCGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGTCACCGGACAGTGCAATGCATTGATTGGAGTAGGGCTAGACCCTCTCCATAGTAGGCGCATTTTAAAACCGATACGTAACGAGCTAAAGCGGACAATATCTGCTAGTGGTGAGCTTAGGCGGTTACAAATAGTATTAGAGCCAGTCACCGGACGGTGCGATGCACTGATCGGAATAGGGCTAGACCCTCTCCATAGTAGACGCGTTTTAAAATCGTAAAACTGACGACGATACGTAACGGGCCAAAATAAACAATATCTGCTAGCAGTGGGTTTGGGGTAATAACATATTTGTTGTTATGACTGGCTTAAATTGCTACATTTCAGGTCTGAATACTAAGGTCTGCCTGGTGATGGGCATTACTCAGCTTCTTGTTTGGGCAGCATGGGGCGTTGTTTCTCACCATCCGTCGCAATGGAAGCTGTGGGCATTAGTCTCGGGCGGTGCAGTTACGATGCTGTTGAAGGCATTCGATTTCCCTCCATATGGAGGATATGTGGATGCTCATGCACTCTGGCATGCTACTTCAATACCTCTTTCATATATATGGTGGAGTTTCGTGAGAGATGATGCTGAATTCATAACTTCTGGTGTTCTCAAGAAGGTGAAGTAGAATACGTGATGTTAATCAGATGGAGGAAATTCTGAAACCACTTTCATTTCAGTGTTAGTTAGTTCATCAACACTCTGGTAGGTTCCCTTGTTTTTCTGGTGTTGCTTGGCGATTAACAAAATGTTGCCCAGAAATGTTGTTTGTATAATGATATTTGCATATCAGGACCAATGAGTTTTGTTTTCTGTTCAGTCTGTGTTTCTTTTTTTTTTTTTTTTAACTTCTTGGTCCTGAGATATTTGTGGGTCAACAGATGAAAGCCCCTCAGCACCATGGCAGTTCTTCTCAATGTAAACATACAATATTTTGCTGATATCAACAGTTTGTGTTATTCAGTCTGTGATGCAGTTTGCACAATTTCTCCTTTGCTTAGCTTGCTTTGGAATATCATTTTCAAACCCAA ATGGCCCTTCTCTTTCCTCTCCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCCTCCCCTACACGCCAGCCCCGGCGACTCTGATCCACTTTACAAGGATTGTGTGGTGCAGTGTGAGAAATCTGGATGCGCTGGTGACAAATGTTTTCAGCATTGTAAATTCTCATCTGATGGGAAGCCTGTGGATGGTCCATGGTATCTGCAGGAGCCTCTGTATCTTCGATGGAAACAGTGGGACTGCCAGACTGATTGCAGGTACCACTGCATGTTATCTAGGGAGGAAGAAAGAACAAATCTTGGTGGTGAGCCTGTCAAATACCATGGGAAATGGCCATTTAGGCGAGTCTATGGCATTCAGGAGCCAGTTGCAGTTGCTCTTGCCGCACTCAATCTTGCGGTGCAATTTCATGGCTGGATATCTTTTTTCCTTCTTCTAAACTACAAGCTTCCACTGAAGCCAAATAAGAAGACATATTATGAATATACTGGGCTGTGGCATATCTATGGCATCCTAGCCATGAATTCTTGGTTCTGGGATGCTGCATTTCACTGTAGACATGTGGAGTTGACTGAGAAGCTGGATTATTCTTCAGCTGTGGCATTTACTGGGTTTTCCCTAATTGTAGCCATACTGCGAGCTCTTAATGTGAGGGATGAGGCTGCTAGAGTCATGGTCTCTGCTCCAATTATCTCATTCGTCACAACCCATATCTTGTATCTCAACTTCTATAAACTTGATCATGGTAATGCATCCATTTCTTAG MALLFPLPFFFFFFFFFFFFFLFPPLHASPGDSDPLYKDCVVQCEKSGCAGDKCFQHCKFSSDGKPVDGPWYLQEPLYLRWKQWDCQTDCRYHCMLSREEERTNLGGEPVKYHGKWPFRRVYGIQEPVAVALAALNLAVQFHGWISFFLLLNYKLPLKPNKKTYYEYTGLWHIYGILAMNSWFWDAAFHCRHVELTEKLDYSSAVAFTGFSLIVAILRALNVRDEAARVMVSAPIISFVTTHILYLNFYKLDHGNASIS Homology
BLAST of CmoCh18G012380 vs. ExPASy Swiss-Prot
Match: A8WFS8 (Post-GPI attachment to proteins factor 3 OS=Danio rerio OX=7955 GN=pgap3 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 4.0e-30 Identity = 82/246 (33.33%), Postives = 117/246 (47.56%), Query Frame = 0
BLAST of CmoCh18G012380 vs. ExPASy Swiss-Prot
Match: A2A559 (Post-GPI attachment to proteins factor 3 OS=Mus musculus OX=10090 GN=Pgap3 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.7e-28 Identity = 67/226 (29.65%), Postives = 110/226 (48.67%), Query Frame = 0
BLAST of CmoCh18G012380 vs. ExPASy Swiss-Prot
Match: Q96FM1 (Post-GPI attachment to proteins factor 3 OS=Homo sapiens OX=9606 GN=PGAP3 PE=1 SV=2) HSP 1 Score: 124.8 bits (312), Expect = 1.4e-27 Identity = 65/226 (28.76%), Postives = 108/226 (47.79%), Query Frame = 0
BLAST of CmoCh18G012380 vs. ExPASy Swiss-Prot
Match: A2V7M9 (Post-GPI attachment to proteins factor 3 OS=Cricetulus griseus OX=10029 GN=PGAP3 PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 9.3e-27 Identity = 64/225 (28.44%), Postives = 107/225 (47.56%), Query Frame = 0
BLAST of CmoCh18G012380 vs. ExPASy Swiss-Prot
Match: A7YWP2 (Post-GPI attachment to proteins factor 3 OS=Bos taurus OX=9913 GN=PGAP3 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26 Identity = 64/226 (28.32%), Postives = 107/226 (47.35%), Query Frame = 0
BLAST of CmoCh18G012380 vs. ExPASy TrEMBL
Match: A0A6J1FZV6 (Post-GPI attachment to proteins factor 3 OS=Cucurbita moschata OX=3662 GN=LOC111449410 PE=3 SV=1) HSP 1 Score: 534.6 bits (1376), Expect = 2.2e-148 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of CmoCh18G012380 vs. ExPASy TrEMBL
Match: A0A6J1HTQ4 (Post-GPI attachment to proteins factor 3 OS=Cucurbita maxima OX=3661 GN=LOC111467394 PE=3 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 1.1e-147 Identity = 252/254 (99.21%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of CmoCh18G012380 vs. ExPASy TrEMBL
Match: A0A1S3AY56 (Post-GPI attachment to proteins factor 3 OS=Cucumis melo OX=3656 GN=LOC103484040 PE=3 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 5.1e-129 Identity = 226/257 (87.94%), Postives = 235/257 (91.44%), Query Frame = 0
BLAST of CmoCh18G012380 vs. ExPASy TrEMBL
Match: A0A0A0LB97 (Post-GPI attachment to proteins factor 3 OS=Cucumis sativus OX=3659 GN=Csa_3G180250 PE=3 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 4.4e-128 Identity = 225/259 (86.87%), Postives = 235/259 (90.73%), Query Frame = 0
BLAST of CmoCh18G012380 vs. ExPASy TrEMBL
Match: A0A6J1JBH9 (Post-GPI attachment to proteins factor 3 OS=Cucurbita maxima OX=3661 GN=LOC111482958 PE=3 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 3.4e-125 Identity = 220/253 (86.96%), Postives = 233/253 (92.09%), Query Frame = 0
BLAST of CmoCh18G012380 vs. TAIR 10
Match: AT5G62130.1 (Per1-like family protein ) HSP 1 Score: 352.8 bits (904), Expect = 2.3e-97 Identity = 153/233 (65.67%), Postives = 189/233 (81.12%), Query Frame = 0
BLAST of CmoCh18G012380 vs. TAIR 10
Match: AT1G16560.1 (Per1-like family protein ) HSP 1 Score: 347.4 bits (890), Expect = 9.7e-96 Identity = 159/239 (66.53%), Postives = 189/239 (79.08%), Query Frame = 0
BLAST of CmoCh18G012380 vs. TAIR 10
Match: AT1G16560.2 (Per1-like family protein ) HSP 1 Score: 347.4 bits (890), Expect = 9.7e-96 Identity = 159/239 (66.53%), Postives = 189/239 (79.08%), Query Frame = 0
BLAST of CmoCh18G012380 vs. TAIR 10
Match: AT1G16560.3 (Per1-like family protein ) HSP 1 Score: 347.4 bits (890), Expect = 9.7e-96 Identity = 159/239 (66.53%), Postives = 189/239 (79.08%), Query Frame = 0
BLAST of CmoCh18G012380 vs. TAIR 10
Match: AT5G62130.2 (Per1-like family protein ) HSP 1 Score: 334.3 bits (856), Expect = 8.5e-92 Identity = 142/217 (65.44%), Postives = 179/217 (82.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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