CmoCh18G012110 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G012110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	DUF569 domain-containing protein
Location	Cmo_Chr18: 12055157 .. 12057264 (-)
RNA-Seq Expression	CmoCh18G012110
Synteny	CmoCh18G012110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATGTAGATATAATCAAGGAGTAGGTATCTTATTTTCACTTCTATTTTAATATTATTTAAAAAAAGAAAAAACGAAAAAGGAACTTTTTACCGTATCGGAGAGGCGGCTTGAGTTACGCCGGTCCGGCGGCGCGAATGTTGACTGAGACAGAGTCACCGAATATTCAACGTTAAAACCGCGTCATTTCAAGTTGCATCGCTAGCTGACTTTGTTTTACCAGTTTTGACAATGAAACGCCCGCGTTCTGTTCTTATCCTCCTTCGTTTACTTAGAAGTTTCCTGATTCAAGAGCAAATAGGAATTTGGTTATAAATTCACTGCCTTCTTTGTTTGGACAGAATCCAAATTTGAAGACTTCCTCTGTTTCTCGATCTTCAATGGATTTCTTCGGCAAAGCCAAGACCGTCCGTCTCCGTAGCCACCACGACAAGTACCTCGTCGCCAACGACGATGAGGAGTCTGTCAACCAAGACCGTGGCGGATCCTCCAATACAGCTCGCTGGTCAGTCGAGCTTACATCCGGCCCCACCTCTGATTCTATCATCCGTCTCAAAAGCTGCTACGGCAAATACCTCACTGCTAGCAATCTCCCTTTCTTGCTCGGAATGACCGGCCGGAAAGTGCTTCAAACCCTTCCCCGACGGCTCGATTCCTCCGTCGAATGGGAACCCATCAGAGAAGGGTCACAGGTCAAGTTGAAAACCCGATATGGGAACTTCTTAAGAGCCAATGGGGGTCTACCGCCGTGGCGAAACTCGGTCACCCATGATATTCCGAGTCGATCCGCTACACAGGATTGGATCCTCTGGGACATCGATGTTGTTGAGATTCAAGTCCAGTCTTTTATTCGTAAAGCTCCCACGATTGAGCATATGGATTCTCTGGATTTCAATCCCGGCTCGCCCCCTTCTACATCAGGCAAACCGGCGCATTACTCAAGACTTGAGGTATGAGATCTCTGTAAAAAAAAAAACTTCCTTCAAGGCAACAGATTTCTTCCTGTTCTTCAAATTCTGATACCCATTTTTGGTGGGTTTTCTTGTAGTCTACTGATTCAACAATCAGTGTACCGCCCAAATCTGAAGGAAGGACTGTTTACTACCATGTGGCTGATGAAAGTGGAGATGTGGATGAAGATACAGTGGAGGGTTCTTGTTTTACATTCAAAGGAAGTGGGGTGGAGGGCCTGACTCGTAAACTGGAGGAAGAAACAGGGATTGAAGATATCATCGTGTGCACTCGCAACCCATTGAATGGAAATCTTTATCCCCTTCGCCTGCAACTTCCTCCCAACAATGCTACCATGCATGTGGTTGCTGTTCCCGAGTCATCAAAATGTGAGATATCTTCAAACCTTTTCCTGTTGCGTTTTTCTCTAAGTTGGCCCTACTGGTTCTGATCCTTTTCCTTAACATCTTGGCTATCTTTTGTTTTCCAGTGGGGCAGGAGTTTGCAAAGCAACGTTTATTATGAACTCAGACAAGTCTCAGACCTTGGTTCAGACTCACTCAGATTCACACAGAAATAGTTACAACAAAAGGGTGTTTAAAGCCATATGTGTAGTCTTCCATATCAGTGATTGCAGCTAAATTCAGGAAGCTTTTTGTGTAATTGATATTCAAAGCTGTTCTTGAATTGCCATAGGAAGGGAGATAGTTCTTGCAGTCTTGACTTTAAGGCAGACTTTTTGGAAAGGTTCCAACTCCTGTTAATTCATGTTGACTTGGCATATCATTGAATTATTTCATTTCTGAACAGTTCCAACCTGCACTTTTCAAACAATTGAATAACTTTATTGGCTGATCTACACAGAAATCACCAAAAGTTCATACAGGAATACGTCCCATTCTTGAAATGATGAAATCTATTAAGATATCTCATGATAATATCTGTATTGAAAATTGGAGAAATTTCTCATGACATCTCTTCTTTAGAAAGCCTTCCAAGGAGGAGTCCGTGGAATGTCTAAGAAAAATAAGCTGCATCATTTCTACTTGGGAGTTTCAGAGATAAAACATATGCTTGTAAGCTCAGGTAGGTTTGTACTTCAAAATTAAAAACATTGAGTTGTGAGATCCCACGTCGGCGGGAGAGCGGAACAAAG

mRNA sequence

CAAAATGTAGATATAATCAAGGAGTAGGTATCTTATTTTCACTTCTATTTTAATATTATTTAAAAAAAGAAAAAACGAAAAAGGAACTTTTTACCGTATCGGAGAGGCGGCTTGAGTTACGCCGGTCCGGCGGCGCGAATGTTGACTGAGACAGAGTCACCGAATATTCAACGTTAAAACCGCGTCATTTCAAGTTGCATCGCTAGCTGACTTTGTTTTACCAGTTTTGACAATGAAACGCCCGCGTTCTGTTCTTATCCTCCTTCGTTTACTTAGAAGTTTCCTGATTCAAGAGCAAATAGGAATTTGGTTATAAATTCACTGCCTTCTTTGTTTGGACAGAATCCAAATTTGAAGACTTCCTCTGTTTCTCGATCTTCAATGGATTTCTTCGGCAAAGCCAAGACCGTCCGTCTCCGTAGCCACCACGACAAGTACCTCGTCGCCAACGACGATGAGGAGTCTGTCAACCAAGACCGTGGCGGATCCTCCAATACAGCTCGCTGGTCAGTCGAGCTTACATCCGGCCCCACCTCTGATTCTATCATCCGTCTCAAAAGCTGCTACGGCAAATACCTCACTGCTAGCAATCTCCCTTTCTTGCTCGGAATGACCGGCCGGAAAGTGCTTCAAACCCTTCCCCGACGGCTCGATTCCTCCGTCGAATGGGAACCCATCAGAGAAGGGTCACAGGTCAAGTTGAAAACCCGATATGGGAACTTCTTAAGAGCCAATGGGGGTCTACCGCCGTGGCGAAACTCGGTCACCCATGATATTCCGAGTCGATCCGCTACACAGGATTGGATCCTCTGGGACATCGATGTTGTTGAGATTCAAGTCCAGTCTTTTATTCGTAAAGCTCCCACGATTGAGCATATGGATTCTCTGGATTTCAATCCCGGCTCGCCCCCTTCTACATCAGGCAAACCGGCGCATTACTCAAGACTTGAGTCTACTGATTCAACAATCAGTGTACCGCCCAAATCTGAAGGAAGGACTGTTTACTACCATGTGGCTGATGAAAGTGGAGATGTGGATGAAGATACAGTGGAGGGTTCTTGTTTTACATTCAAAGGAAGTGGGGTGGAGGGCCTGACTCGTAAACTGGAGGAAGAAACAGGGATTGAAGATATCATCGTGTGCACTCGCAACCCATTGAATGGAAATCTTTATCCCCTTCGCCTGCAACTTCCTCCCAACAATGCTACCATGCATGTGGTTGCTGTTCCCGAGTCATCAAAATTGGGGCAGGAGTTTGCAAAGCAACGTTTATTATGAACTCAGACAAGTCTCAGACCTTGGTTCAGACTCACTCAGATTCACACAGAAATAGTTACAACAAAAGGGTGTTTAAAGCCATATGTGTAGTCTTCCATATCAGTGATTGCAGCTAAATTCAGGAAGCTTTTTGTGTAATTGATATTCAAAGCTGTTCTTGAATTGCCATAGGAAGGGAGATAGTTCTTGCAGTCTTGACTTTAAGGCAGACTTTTTGGAAAGGTTCCAACTCCTGTTAATTCATGTTGACTTGGCATATCATTGAATTATTTCATTTCTGAACAGTTCCAACCTGCACTTTTCAAACAATTGAATAACTTTATTGGCTGATCTACACAGAAATCACCAAAAGTTCATACAGGAATACGTCCCATTCTTGAAATGATGAAATCTATTAAGATATCTCATGATAATATCTGTATTGAAAATTGGAGAAATTTCTCATGACATCTCTTCTTTAGAAAGCCTTCCAAGGAGGAGTCCGTGGAATGTCTAAGAAAAATAAGCTGCATCATTTCTACTTGGGAGTTTCAGAGATAAAACATATGCTTGTAAGCTCAGGTAGGTTTGTACTTCAAAATTAAAAACATTGAGTTGTGAGATCCCACGTCGGCGGGAGAGCGGAACAAAG

Coding sequence (CDS)

ATGGATTTCTTCGGCAAAGCCAAGACCGTCCGTCTCCGTAGCCACCACGACAAGTACCTCGTCGCCAACGACGATGAGGAGTCTGTCAACCAAGACCGTGGCGGATCCTCCAATACAGCTCGCTGGTCAGTCGAGCTTACATCCGGCCCCACCTCTGATTCTATCATCCGTCTCAAAAGCTGCTACGGCAAATACCTCACTGCTAGCAATCTCCCTTTCTTGCTCGGAATGACCGGCCGGAAAGTGCTTCAAACCCTTCCCCGACGGCTCGATTCCTCCGTCGAATGGGAACCCATCAGAGAAGGGTCACAGGTCAAGTTGAAAACCCGATATGGGAACTTCTTAAGAGCCAATGGGGGTCTACCGCCGTGGCGAAACTCGGTCACCCATGATATTCCGAGTCGATCCGCTACACAGGATTGGATCCTCTGGGACATCGATGTTGTTGAGATTCAAGTCCAGTCTTTTATTCGTAAAGCTCCCACGATTGAGCATATGGATTCTCTGGATTTCAATCCCGGCTCGCCCCCTTCTACATCAGGCAAACCGGCGCATTACTCAAGACTTGAGTCTACTGATTCAACAATCAGTGTACCGCCCAAATCTGAAGGAAGGACTGTTTACTACCATGTGGCTGATGAAAGTGGAGATGTGGATGAAGATACAGTGGAGGGTTCTTGTTTTACATTCAAAGGAAGTGGGGTGGAGGGCCTGACTCGTAAACTGGAGGAAGAAACAGGGATTGAAGATATCATCGTGTGCACTCGCAACCCATTGAATGGAAATCTTTATCCCCTTCGCCTGCAACTTCCTCCCAACAATGCTACCATGCATGTGGTTGCTGTTCCCGAGTCATCAAAATTGGGGCAGGAGTTTGCAAAGCAACGTTTATTATGA

Protein sequence

MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGPTSDSIIRLKSCYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGGLPPWRNSVTHDIPSRSATQDWILWDIDVVEIQVQSFIRKAPTIEHMDSLDFNPGSPPSTSGKPAHYSRLESTDSTISVPPKSEGRTVYYHVADESGDVDEDTVEGSCFTFKGSGVEGLTRKLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKLGQEFAKQRLL

Homology

[Close]

BLAST of CmoCh18G012110 vs. ExPASy TrEMBL
Match: A0A6J1FZD3 (uncharacterized protein LOC111449270 OS=Cucurbita moschata OX=3662 GN=LOC111449270 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 1.8e-170
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGPTSDSIIRLKS 60
           MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGPTSDSIIRLKS
Sbjct: 1   MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGPTSDSIIRLKS 60

Query: 61  CYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGG 120
           CYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGG
Sbjct: 61  CYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGG 120

Query: 121 LPPWRNSVTHDIPSRSATQDWILWDIDVVEIQVQSFIRKAPTIEHMDSLDFNPGSPPSTS 180
           LPPWRNSVTHDIPSRSATQDWILWDIDVVEIQVQSFIRKAPTIEHMDSLDFNPGSPPSTS
Sbjct: 121 LPPWRNSVTHDIPSRSATQDWILWDIDVVEIQVQSFIRKAPTIEHMDSLDFNPGSPPSTS 180

Query: 181 GKPAHYSRLESTDSTISVPPKSEGRTVYYHVADESGDVDEDTVEGSCFTFKGSGVEGLTR 240
           GKPAHYSRLESTDSTISVPPKSEGRTVYYHVADESGDVDEDTVEGSCFTFKGSGVEGLTR
Sbjct: 181 GKPAHYSRLESTDSTISVPPKSEGRTVYYHVADESGDVDEDTVEGSCFTFKGSGVEGLTR 240

Query: 241 KLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKLGQEFAKQRLL 299
           KLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKLGQEFAKQRLL
Sbjct: 241 KLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKLGQEFAKQRLL 298

[Close]

BLAST of CmoCh18G012110 vs. ExPASy TrEMBL
Match: A0A6J1KDX7 (uncharacterized protein LOC111493441 OS=Cucurbita maxima OX=3661 GN=LOC111493441 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 3.9e-149
Identity = 262/298 (87.92%), Postives = 277/298 (92.95%), Query Frame = 0


Query: 1   MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGPTSDSIIRLKS 60
           MDFF  AKTVRLRSHHDKYLVA++DEESVNQDR GSS TARWSVE  SG +SDSIIRLKS
Sbjct: 208 MDFFRNAKTVRLRSHHDKYLVADNDEESVNQDRSGSSKTARWSVEFASGASSDSIIRLKS 267

Query: 61  CYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGG 120
           CYGKYLTASN PFLLGMTGRKVLQTLPRRLDSSVEWEP+REGSQVKLKTRYGNFLRANGG
Sbjct: 268 CYGKYLTASNQPFLLGMTGRKVLQTLPRRLDSSVEWEPVREGSQVKLKTRYGNFLRANGG 327

Query: 121 LPPWRNSVTHDIPSRSATQDWILWDIDVVEIQVQSFIRKAPTIEHMDSLDFNPGSPPSTS 180
           LPPWRNSVTHDIPSR+ATQDWILWDIDVVEIQVQS   KA TIEHMDSLDFNPGSPPS S
Sbjct: 328 LPPWRNSVTHDIPSRTATQDWILWDIDVVEIQVQSANHKAATIEHMDSLDFNPGSPPSAS 387

Query: 181 GKPAHYSRLESTDSTISVPPKSEGRTVYYHVADESGDVDEDTVEGSCFTFKGSGVEGLTR 240
           GK ++Y RLESTDST+S+PPKSEGRT+YYHVADESGDVDEDTVEGS F FKG+GVE LT 
Sbjct: 388 GKSSNYPRLESTDSTVSLPPKSEGRTIYYHVADESGDVDEDTVEGSSFMFKGNGVEELTH 447

Query: 241 KLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKLGQEFAKQRLL 299
           K+EEETGI+ IIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKLG++F KQRLL
Sbjct: 448 KMEEETGIKGIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKLGKDFEKQRLL 505

[Close]

BLAST of CmoCh18G012110 vs. ExPASy TrEMBL
Match: A0A6J1GYJ0 (uncharacterized protein LOC111458670 OS=Cucurbita moschata OX=3662 GN=LOC111458670 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 3.7e-147
Identity = 260/299 (86.96%), Postives = 278/299 (92.98%), Query Frame = 0


Query: 1   MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGPTSDSIIRLKS 60
           MDFF  AKTVRLRSHHDKYLVA++DEESVNQDR GSS TARWSVE  SG +SDSIIRLKS
Sbjct: 208 MDFFRNAKTVRLRSHHDKYLVADNDEESVNQDRSGSSKTARWSVEFASGASSDSIIRLKS 267

Query: 61  CYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGG 120
           CYGKYLTASN PFLLGMTGRKVLQTLPRRLDSSVEWEP+REGSQVKLKTRYGNFLRANGG
Sbjct: 268 CYGKYLTASNQPFLLGMTGRKVLQTLPRRLDSSVEWEPVREGSQVKLKTRYGNFLRANGG 327

Query: 121 LPPWRNSVTHDIPSRSATQDWILWDIDVVEIQVQSFIRKAPTIEHMDSLDFNPGSPPSTS 180
           LPPWRNSVTHDIPSR+ATQDWILWDIDVVEIQVQS   KA TIEHMDSLDFNP SPPS +
Sbjct: 328 LPPWRNSVTHDIPSRTATQDWILWDIDVVEIQVQSANHKAATIEHMDSLDFNPSSPPSAA 387

Query: 181 GKPAHYSRLESTDSTISVPPKSEGRTVYYHVADES-GDVDEDTVEGSCFTFKGSGVEGLT 240
           GK ++YS+LESTDST+S+PPKS+GRT+YYHVADES GDVDEDTVEGS F FKG+GVE LT
Sbjct: 388 GKSSNYSKLESTDSTVSLPPKSDGRTIYYHVADESGGDVDEDTVEGSSFMFKGNGVEELT 447

Query: 241 RKLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKLGQEFAKQRLL 299
           RK+EEETGI+ IIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKLG++F KQRLL
Sbjct: 448 RKMEEETGIKGIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKLGKDFEKQRLL 506

[Close]

BLAST of CmoCh18G012110 vs. ExPASy TrEMBL
Match: A0A0A0KQG9 (DUF569 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604130 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.8e-147
Identity = 257/298 (86.24%), Postives = 274/298 (91.95%), Query Frame = 0


Query: 1   MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGPTSDSIIRLKS 60
           MDFF  AKTVRLRSHHDKYLVA+DD+++VNQDR GSS TARWSVE  SG  S+S IRLKS
Sbjct: 1   MDFFRNAKTVRLRSHHDKYLVADDDQDTVNQDRNGSSKTARWSVEFVSGANSESFIRLKS 60

Query: 61  CYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGG 120
           CYGKYLTASN PFLLGMTGRKVLQTLPRRLDSSVEWEP+REGSQVK KTRYGNFLRANGG
Sbjct: 61  CYGKYLTASNQPFLLGMTGRKVLQTLPRRLDSSVEWEPVREGSQVKFKTRYGNFLRANGG 120

Query: 121 LPPWRNSVTHDIPSRSATQDWILWDIDVVEIQVQSFIRKAPTIEHMDSLDFNPGSPPSTS 180
           LPPWRNSVTHDIP+R+ATQDWILWDIDVVEIQV S   +APTI+H DSLDFNP SPPSTS
Sbjct: 121 LPPWRNSVTHDIPNRTATQDWILWDIDVVEIQV-SMNHRAPTIDHQDSLDFNPSSPPSTS 180

Query: 181 GKPAHYSRLESTDSTISVPPKSEGRTVYYHVADESGDVDEDTVEGSCFTFKGSGVEGLTR 240
           GKP HYSRLESTDST+SVPPKSEGRT+YYHVADESGDVDEDTVEGS FTFKG+GVE LTR
Sbjct: 181 GKPTHYSRLESTDSTVSVPPKSEGRTIYYHVADESGDVDEDTVEGSSFTFKGNGVEELTR 240

Query: 241 KLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKLGQEFAKQRLL 299
           KL+EETGIE IIVCTRNPLNGNLYPLRLQLPPNNA MHVVAVPE+SKLG++  KQRLL
Sbjct: 241 KLKEETGIEGIIVCTRNPLNGNLYPLRLQLPPNNAIMHVVAVPETSKLGKDLGKQRLL 297

[Close]

BLAST of CmoCh18G012110 vs. ExPASy TrEMBL
Match: A0A1S3BFE1 (uncharacterized protein LOC103489071 OS=Cucumis melo OX=3656 GN=LOC103489071 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 4.1e-146
Identity = 256/298 (85.91%), Postives = 273/298 (91.61%), Query Frame = 0


Query: 1   MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGPTSDSIIRLKS 60
           MDFF  AKTVRLRSHHDKYLVA+DD+++VNQDRGGSS +ARWSVE  SG  SDS IRLKS
Sbjct: 1   MDFFRNAKTVRLRSHHDKYLVADDDQDTVNQDRGGSSKSARWSVEFVSGANSDSFIRLKS 60

Query: 61  CYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGG 120
           CYGKYLTASN PFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVK KTRYGNFLRANGG
Sbjct: 61  CYGKYLTASNQPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKFKTRYGNFLRANGG 120

Query: 121 LPPWRNSVTHDIPSRSATQDWILWDIDVVEIQVQSFIRKAPTIEHMDSLDFNPGSPPSTS 180
           LPPWRNSVTHDIP+R+ATQDWILWDIDVVEIQV S   +APTI+H DSLDFNP SPPSTS
Sbjct: 121 LPPWRNSVTHDIPNRTATQDWILWDIDVVEIQV-SMNHRAPTIDHQDSLDFNPSSPPSTS 180

Query: 181 GKPAHYSRLESTDSTISVPPKSEGRTVYYHVADESGDVDEDTVEGSCFTFKGSGVEGLTR 240
           GKP HYSRLESTDST+SVPPKSEGRT+YYHVADE GDVDEDTVEGS FTFKG+GVE LTR
Sbjct: 181 GKPTHYSRLESTDSTVSVPPKSEGRTIYYHVADERGDVDEDTVEGSSFTFKGNGVEELTR 240

Query: 241 KLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKLGQEFAKQRLL 299
           KL+EETGI+ IIVCTRNPLNGNLYPLRLQLPPNNA MHVVAVPE+SKLG++  KQ LL
Sbjct: 241 KLKEETGIDGIIVCTRNPLNGNLYPLRLQLPPNNAIMHVVAVPETSKLGKDLGKQLLL 297

[Close]

BLAST of CmoCh18G012110 vs. TAIR 10
Match: AT1G59710.1 (Protein of unknown function (DUF569) )

HSP 1 Score: 387.1 bits (993), Expect = 1.3e-107
Identity = 194/306 (63.40%), Postives = 232/306 (75.82%), Query Frame = 0


Query: 1   MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGPTSDSIIRLKS 60
           M+ F KAK VRLRSHHDKYLVA++DEESV Q+R GS+  A+W+VE+  G T  ++IRLKS
Sbjct: 1   MEIFQKAKAVRLRSHHDKYLVADEDEESVTQERNGSAGAAKWTVEIIPGST--NLIRLKS 60

Query: 61  CYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGG 120
            YGKYLTASN PFLLG TG+KVLQT P RLDSS+ WEPIR+ + VKLKTRYGNFLR NGG
Sbjct: 61  AYGKYLTASNKPFLLGATGKKVLQTKPSRLDSSLAWEPIRDSALVKLKTRYGNFLRGNGG 120

Query: 121 LPPWRNSVTHDIPSRSATQDWILWDIDVVEI-----------QVQSFIRKAPTIEHMDSL 180
           LPPWRNSVTHDIP RSATQ+W+LW IDVVEI           Q     +    + H DSL
Sbjct: 121 LPPWRNSVTHDIPHRSATQEWVLWHIDVVEILPANANSDHHHQHLQLQQPPSPLHHSDSL 180

Query: 181 DFNPGSPPSTSGKPAHYSRLESTDS-TISVPPKSEGRTVYYHVADESGDVDEDTVEGSCF 240
           DF PGSP     +   + R ESTDS  +  PPKSEGR +YYHVAD+  DV++D+VE S F
Sbjct: 181 DFTPGSP----SRSDRFFRQESTDSLAVGSPPKSEGRVIYYHVADDDDDVEDDSVEVSSF 240

Query: 241 TFKGSGVEGLTRKLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKL 295
           TFKG+GVE LT +L+EE+ +ED+IVCTR+PLNG L+PLRLQLPPNNA M VV VP+SSK+
Sbjct: 241 TFKGNGVEELTMRLKEESNVEDVIVCTRSPLNGKLFPLRLQLPPNNADMTVVLVPKSSKI 300

[Close]

BLAST of CmoCh18G012110 vs. TAIR 10
Match: AT3G28630.1 (Protein of unknown function (DUF569) )

HSP 1 Score: 342.4 bits (877), Expect = 3.6e-94
Identity = 173/305 (56.72%), Postives = 211/305 (69.18%), Query Frame = 0


Query: 1   MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGPTSDSIIRLKS 60
           M+ F KA+TVRLRS+HDKYL+A +DEESV+QDR G S  ARW+VE+        +IRLKS
Sbjct: 33  MEIFKKAETVRLRSYHDKYLLAEEDEESVSQDRDGRSMNARWTVEVVE---KADVIRLKS 92

Query: 61  CYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGG 120
           C+GKYLTASN+P  LGMTG++V QTLPRRLDSS EWEP+REG QV+LKTRYG +LRANGG
Sbjct: 93  CFGKYLTASNIPMFLGMTGKRVTQTLPRRLDSSTEWEPVREGVQVRLKTRYGQYLRANGG 152

Query: 121 LPPWRNSVTHDIPSRSATQDWILWDIDVVEIQVQSFIRKAPTIEHMDSLDF--------- 180
           LPPWRNS+THDIP RS TQDW+LWDID++E    S  +KAP +                 
Sbjct: 153 LPPWRNSITHDIPHRSTTQDWVLWDIDILE----SRKKKAPPVAEPAYTPLPPPPPPPEL 212

Query: 181 ---------NPGSPPSTSGKPAHYSRLESTDSTISVPPKSEGRTVYYHVADESGDVDEDT 240
                     P SP   S +   +S+ ES D T+S P K++GR +YY + DE G+VDE T
Sbjct: 213 LQVRKDDHQEPNSPKGFSLRSPRFSKSES-DDTVSSPVKADGRLIYYRIGDEDGNVDE-T 272

Query: 241 VEGSCFTFKGSGVEGLTRKLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAV 288
            +   F FKG G+E L  KL EETG+ DI +C++NPLNG LYPLRL LPPNN  MHVV +
Sbjct: 273 AKEELFCFKGMGLEELKEKLIEETGLSDISICSKNPLNGKLYPLRLHLPPNNTKMHVVLI 328

[Close]

BLAST of CmoCh18G012110 vs. TAIR 10
Match: AT3G28630.2 (Protein of unknown function (DUF569) )

HSP 1 Score: 340.1 bits (871), Expect = 1.8e-93
Identity = 169/290 (58.28%), Postives = 205/290 (70.69%), Query Frame = 0


Query: 1   MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGPTSDSIIRLKS 60
           M+ F KA+TVRLRS+HDKYL+A +DEESV+QDR G S  ARW+VE+        +IRLKS
Sbjct: 33  MEIFKKAETVRLRSYHDKYLLAEEDEESVSQDRDGRSMNARWTVEVVE---KADVIRLKS 92

Query: 61  CYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGG 120
           C+GKYLTASN+P  LGMTG++V QTLPRRLDSS EWEP+REG QV+LKTRYG +LRANGG
Sbjct: 93  CFGKYLTASNIPMFLGMTGKRVTQTLPRRLDSSTEWEPVREGVQVRLKTRYGQYLRANGG 152

Query: 121 LPPWRNSVTHDIPSRSATQDWILWDIDVVEIQVQSFIRKAPTIEHMDSLDFNPGSPPS-- 180
           LPPWRNS+THDIP RS TQDW+LWDID++E    S  +KAP +         P  PP   
Sbjct: 153 LPPWRNSITHDIPHRSTTQDWVLWDIDILE----SRKKKAPPVAEPAYTPLPPPPPPPEL 212

Query: 181 -TSGKPAHYSRLESTDSTISVPPKSEGRTVYYHVADESGDVDEDTVEGSCFTFKGSGVEG 240
               K  H         ++S P K++GR +YY + DE G+VDE T +   F FKG G+E 
Sbjct: 213 LQVRKDDHQEPNSPKGFSLSSPVKADGRLIYYRIGDEDGNVDE-TAKEELFCFKGMGLEE 272

Query: 241 LTRKLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSK 288
           L  KL EETG+ DI +C++NPLNG LYPLRL LPPNN  MHVV +P  SK
Sbjct: 273 LKEKLIEETGLSDISICSKNPLNGKLYPLRLHLPPNNTKMHVVLIPSPSK 314

[Close]

BLAST of CmoCh18G012110 vs. TAIR 10
Match: AT1G27100.1 (Actin cross-linking protein )

HSP 1 Score: 334.3 bits (856), Expect = 9.7e-92
Identity = 171/297 (57.58%), Postives = 213/297 (71.72%), Query Frame = 0


Query: 1   MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGPTSDS--IIRL 60
           M+FF KAK +R+R+ H+KYL A+DDEE+V Q+R GS+  ARW+VE    P  DS  +IRL
Sbjct: 227 MEFFQKAKAIRMRNSHNKYLTADDDEETVTQNRNGSTKNARWTVE----PVRDSFHVIRL 286

Query: 61  KSCYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRAN 120
           KSCYGKYLTASN  FLLG TG+KV+Q    R+DSSVEWEP+REGS++KL+TR GN+LR N
Sbjct: 287 KSCYGKYLTASNERFLLGATGKKVIQLKLSRVDSSVEWEPLREGSKIKLRTRSGNYLRGN 346

Query: 121 GGLPPWRNSVTHDIPSRSATQDWILWDIDVVEIQVQSFIR----KAPTIEHMDSLDF-NP 180
           GGLPPWRNSVTHD+P  SATQD I WD+DVVEI   S  +    KAP  +         P
Sbjct: 347 GGLPPWRNSVTHDVPHLSATQDSISWDVDVVEILTDSEFKTESAKAPPPKTTSPPPHRRP 406

Query: 181 GSPPSTSGKPAHYSRL--ESTDSTISVPPKSEGRTVYYHVADESGDVDEDTVEGSCFTFK 240
            S P ++  P   S L   S   ++  PPKS+GRT+YYHVADE G V+++T  G  FTFK
Sbjct: 407 TSSPLSAESPRTSSSLSDRSDSDSVESPPKSDGRTIYYHVADEEGHVEDETTVGYAFTFK 466

Query: 241 GSGVEGLTRKLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKL 289
           G+ V  LT+ L EET +ED +VCTR+PLNG L+PLRLQLPPNN T+HV+ +P S+ L
Sbjct: 467 GNSVAELTQTLREETCMEDAVVCTRSPLNGKLFPLRLQLPPNNGTLHVILLPSSASL 519

[Close]

BLAST of CmoCh18G012110 vs. TAIR 10
Match: AT1G69890.1 (Protein of unknown function (DUF569) )

HSP 1 Score: 321.6 bits (823), Expect = 6.5e-88
Identity = 165/287 (57.49%), Postives = 203/287 (70.73%), Query Frame = 0


Query: 1   MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGPTSDSIIRLKS 60
           MDFF +AK VR+R+ HDKYL A++DEE+V QDR GS   ARW VE   G  S  +IRL+S
Sbjct: 1   MDFFNQAKAVRMRNVHDKYLTADEDEETVTQDRNGSDKRARWIVEPVRG--SFEVIRLRS 60

Query: 61  CYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGG 120
           CYG YLTASN  FLLG TGRKV+ + P RLDSSVEWEP+REGS++KLKTRYGN LRANGG
Sbjct: 61  CYGNYLTASNERFLLGATGRKVVLSKPARLDSSVEWEPVREGSKMKLKTRYGNLLRANGG 120

Query: 121 LPPWRNSVTHDIPSRSATQDWILWDIDVVEIQVQSFIRKAPTIEHMDSLDFNPGSPPSTS 180
           LPPWRNSVTHD    S   D  LWD+DVVEI V +     P           P   PS +
Sbjct: 121 LPPWRNSVTHD---TSHVLDSFLWDVDVVEILVGT---TTPAPAPAPVTTPPPHRRPSYT 180

Query: 181 GKPAHYSRLESTDSTISV-PPKSEGRTVYYHVADESGDVDEDTVEGSCFTFKGSGVEGLT 240
             P   +  E ++  ++V PPKSEGR +YYH+ADE G V+E++  G   TFKG+ VE LT
Sbjct: 181 YSPVSRTSSEKSEEELTVPPPKSEGRPIYYHIADEEGHVEEESAVGYALTFKGNSVEQLT 240

Query: 241 RKLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESS 287
           + L+EET ++D++VCTR+P NG L+PLRLQLPPN+ TMHV+ VP S+
Sbjct: 241 QALQEETSMDDVVVCTRHPSNGKLFPLRLQLPPNSGTMHVILVPSST 279

The following BLAST results are available for this feature:

BLAST of CmoCh18G012110 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh18G012110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZD3	1.8e-170	100.00	uncharacterized protein LOC111449270 OS=Cucurbita moschata OX=3662 GN=LOC1114492...	[more]
A0A6J1KDX7	3.9e-149	87.92	uncharacterized protein LOC111493441 OS=Cucurbita maxima OX=3661 GN=LOC111493441...	[more]
A0A6J1GYJ0	3.7e-147	86.96	uncharacterized protein LOC111458670 OS=Cucurbita moschata OX=3662 GN=LOC1114586...	[more]
A0A0A0KQG9	4.8e-147	86.24	DUF569 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604130 PE=4...	[more]
A0A1S3BFE1	4.1e-146	85.91	uncharacterized protein LOC103489071 OS=Cucumis melo OX=3656 GN=LOC103489071 PE=...	[more]

BLAST of CmoCh18G012110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59710.1	1.3e-107	63.40	Protein of unknown function (DUF569)	[more]
AT3G28630.1	3.6e-94	56.72	Protein of unknown function (DUF569)	[more]
AT3G28630.2	1.8e-93	58.28	Protein of unknown function (DUF569)	[more]
AT1G27100.1	9.7e-92	57.58	Actin cross-linking protein	[more]
AT1G69890.1	6.5e-88	57.49	Protein of unknown function (DUF569)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.80.10.50		coord: 9..131 e-value: 6.9E-17 score: 63.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..200
None	No IPR available	PANTHER	PTHR31205	ACTIN CROSS-LINKING PROTEIN (DUF569)	coord: 1..287
None	No IPR available	PANTHER	PTHR31205:SF42	CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED	coord: 1..287
IPR007679	Domain of unknown function DUF569	PFAM	PF04601	DUF569	coord: 1..144 e-value: 5.4E-72 score: 240.0
IPR008999	Actin-crosslinking	SUPERFAMILY	50405	Actin-crosslinking proteins	coord: 7..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G012110.1	CmoCh18G012110.1	mRNA