CmoCh18G010650 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGTCAAATTCATAACTTTGATCCAATTTTATCATAAAGCTTTGCCCTTTTCACTTCATTTTGTCTTTATTTTGTGAGTGATATGCGTGGGGAGGATCAAGAACAGGATCATCATCATCAACATCAAGGGGAGTGTTCACAAACAATTGAGAATATGTTTCAAGAACAGCTTCTTCTTCACCAACAACTACAAAACAACACCACCGATCATATTATCTATGGAGATCATCACCATCATGGAGCTGGAAGAGGGTTGATTTTCCCGGCCGACGTCGTGTCGCCGGTTCTAAACTCGTGGCCTCCGCTCAACCCATTTCTCATTCCTCCTCCACCTCCGCCTCCGCCACCGACATCGTTATGTTCGTCGTCGTCGTATGGTAATCTTTTTAACCGGAGACCGGCTAATTGTCTTCAATTTGCTTATGATGGAACTTCCTCAGCGGACCACTTGGGTCGAATCATATCAACCACGCTTGGACCAGTGGTTCATCATGGCTCAACTGCTCCCTTTGGATTACAAGCTGAGCTTGGCAAAATGAGTGCTCAAGAAATAATGGATGCCAAAGCTCTTGCAGCTTCTAAAAGCCATAGTGAAGCGGAGAGAAGAAGAAGAGAAAGAATCAATAATCATCTTGCTAAGCTCCGGAGCTTACTTCCTAGTACCACTAAAGTAAGCATTTTTATGAATCCCTATATTGCTTTTCACTTACCCATTTGTTTGTTTAAGTTTATTTCCATTTCTTGCATTGCTTTTTTGGATCAAAGTTGCAATTTTTAACATATAGAACAACAAATTTCTTACATTTTCAACATCCCATGATGTTTCCTCGTTTGTTCAAATAAGGGTTTGTTGTGTCGTGTTTGTTTTTTGGTGTGGGAATGAGGAAGAAGAAAAGAGAGCTTAACCGGTAATGTCGCTGGATTGATATCATAAAGAGGAACCAAAATTGCAGTTGGAAAAGGGTTTCGGTTGGGAAATTTGTTGCCGGATGTCAGTCAAAAATATGTTAGAGAATGAAAAGAAATAAAGAGAGACAAATTCAGTATCCTTGTCAGTTACCCTTAGAGAGGCCCTTATCTATTATTCTTATGCCCTTTCCCTTCCCACTTCTTAGCTTAGCCCCACTACCAATGACCCTAAACTCAAAACACAACACTTCCACTAGCTGTCTCTCTCTCGGTATCTGCAACCGTCTAAGCCCATCGCTAGTGGATATTGTCTTCTTTGAACTTTTCAGCAAGGTTTTTAAAACACATCTGCTATTGAGAAGTATCCACATCCTTGTAAAGAATGTTTCATTCTCCTCCCTAACTGACGTGGGATCTCATAGTATCAATACCCTAAACCCAAAACACAACACCCCACTAGCTAACTCACTCCTTATCTGTAACAACCCAAGCCCACAGCTAGTTGATATTGTTTTATTTGGGCTTTCTCTTTTGAATTTTCACTCAAAATTTTTAAAACGTGTATGCTAGGGAGAGGTTTCCACACCCTTATAAATAAGATTTCATTCTTCTCTCTATCCGATGTGGGTTATGACAGTATCACAAAACTTAGTTGGGGTTTCAAAATATCAAGCGGTTTGCCTTACATTTACCCAACTTTTAGGAAATCGATCCATTATCTACTTGAGTTATCCTTCTATCGATTCCTAATCTTAAGTCTGCCTTAAAATTTTTATGTCGATGAATTTCTTTGCATGTGTTGAATTGTGAGATTCCACATTAGTTGGAAAAGGGAACGGAACATTCCTTATAAGAGTGTGGAAACTTCTCCCTAATAGACACGTTTTAAAGCCATGAGCCTAACGACGACATGTAATAGGCTAAAGCGGACAATATTTGCTAAGGGTGGGCTTGGGCTGTTACAAATGATATCAGAGCCAAACATTAAGCGGTGTGCCAGCTAGAACGCTGTGTCCCAAGGGAGGTAGATTGTGAGATCCCACGTCGGTTATAAGAGTGTGAAAACCTCTCCCTAATACACGCGTTTTAAAACTGTGAAGTTGACGGCGATACGTAACAAGCCAAAACAGACAATATCTGCCAGCAGTAGACTATTACACGATGTTATCTACGATTTTACGTAGATTAAGGAAGAGCATTAGAACAATGTCTTTTGTTTTTTTTAGTGTCCATTTGAAGCATAGACCAACACTAACAAAACCCTTTATATTTTTGGTGATATCAAACAGACAGACAAAGCTTCACTACTAGCAGAAGTAATACAACACGTGAAAGAGCTAAAACGGCAAACATCATTGATAGCAGAAACAAGTCCAATCCCAACAGACATCGACGAGCTAACAGTGGACGATGCCTCAGACGAGATGATGATCAACGGCGCCAAATTTGTAATAAAAGCTTCTCTTTGCTGTGAGGACCGTTCAGATCTCCTCCCTGACCTCATCAAAACACTGAAATCCTTGCGCTTAAGAACCCTCAAAGCTGAAATCACAACCCTTGGTGGGCGCGTGAGAAATGTGCTGTTTGTTACCGGTGAAGACGACGAGCCATCAACTGACCATAATAACAACGATAATAACAATAATAATAATAATCCCAATTCAGACAGCCAACAACAACAACAACAACATAGTATCAGCTCAATTCAAGAAGCATTGAAGGCTGTGATGGAAAAAACAGGACCGGATGATTCTTCGTCAGGAAACATTAAACGACAAAGAACAAATAACATCAATATCCTTTAAGGTTTCTTCATGTTTTTTTTTTTTTTTTTAATGAACTGAAAATTTACATATCACTGAAATTTCCACCATTTTAGAGGGATCTTTTTCATGGGGTTCGGAAAAAAAGTGATCTTTTGGGTAAGAGGGGCTTTTCCCGAGTTGATAGCTATACGTAACGGACCAAAACAGAGGACAGACGATGATTTATGGTGTGAGAAAAGTATTGAAG TGGTCAAATTCATAACTTTGATCCAATTTTATCATAAAGCTTTGCCCTTTTCACTTCATTTTGTCTTTATTTTGTGAGTGATATGCGTGGGGAGGATCAAGAACAGGATCATCATCATCAACATCAAGGGGAGTGTTCACAAACAATTGAGAATATGTTTCAAGAACAGCTTCTTCTTCACCAACAACTACAAAACAACACCACCGATCATATTATCTATGGAGATCATCACCATCATGGAGCTGGAAGAGGGTTGATTTTCCCGGCCGACGTCGTGTCGCCGGTTCTAAACTCGTGGCCTCCGCTCAACCCATTTCTCATTCCTCCTCCACCTCCGCCTCCGCCACCGACATCGTTATGTTCGTCGTCGTCGTATGGTAATCTTTTTAACCGGAGACCGGCTAATTGTCTTCAATTTGCTTATGATGGAACTTCCTCAGCGGACCACTTGGGTCGAATCATATCAACCACGCTTGGACCAGTGGTTCATCATGGCTCAACTGCTCCCTTTGGATTACAAGCTGAGCTTGGCAAAATGAGTGCTCAAGAAATAATGGATGCCAAAGCTCTTGCAGCTTCTAAAAGCCATAGTGAAGCGGAGAGAAGAAGAAGAGAAAGAATCAATAATCATCTTGCTAAGCTCCGGAGCTTACTTCCTAGTACCACTAAAACAGACAAAGCTTCACTACTAGCAGAAGTAATACAACACGTGAAAGAGCTAAAACGGCAAACATCATTGATAGCAGAAACAAGTCCAATCCCAACAGACATCGACGAGCTAACAGTGGACGATGCCTCAGACGAGATGATGATCAACGGCGCCAAATTTGTAATAAAAGCTTCTCTTTGCTGTGAGGACCGTTCAGATCTCCTCCCTGACCTCATCAAAACACTGAAATCCTTGCGCTTAAGAACCCTCAAAGCTGAAATCACAACCCTTGGTGGGCGCGTGAGAAATGTGCTGTTTGTTACCGGTGAAGACGACGAGCCATCAACTGACCATAATAACAACGATAATAACAATAATAATAATAATCCCAATTCAGACAGCCAACAACAACAACAACAACATAGTATCAGCTCAATTCAAGAAGCATTGAAGGCTGTGATGGAAAAAACAGGACCGGATGATTCTTCGTCAGGAAACATTAAACGACAAAGAACAAATAACATCAATATCCTTTAAGGTTTCTTCATGTTTTTTTTTTTTTTTTTAATGAACTGAAAATTTACATATCACTGAAATTTCCACCATTTTAGAGGGATCTTTTTCATGGGGTTCGGAAAAAAAGTGATCTTTTGGGTAAGAGGGGCTTTTCCCGAGTTGATAGCTATACGTAACGGACCAAAACAGAGGACAGACGATGATTTATGGTGTGAGAAAAGTATTGAAG ATGCGTGGGGAGGATCAAGAACAGGATCATCATCATCAACATCAAGGGGAGTGTTCACAAACAATTGAGAATATGTTTCAAGAACAGCTTCTTCTTCACCAACAACTACAAAACAACACCACCGATCATATTATCTATGGAGATCATCACCATCATGGAGCTGGAAGAGGGTTGATTTTCCCGGCCGACGTCGTGTCGCCGGTTCTAAACTCGTGGCCTCCGCTCAACCCATTTCTCATTCCTCCTCCACCTCCGCCTCCGCCACCGACATCGTTATGTTCGTCGTCGTCGTATGGTAATCTTTTTAACCGGAGACCGGCTAATTGTCTTCAATTTGCTTATGATGGAACTTCCTCAGCGGACCACTTGGGTCGAATCATATCAACCACGCTTGGACCAGTGGTTCATCATGGCTCAACTGCTCCCTTTGGATTACAAGCTGAGCTTGGCAAAATGAGTGCTCAAGAAATAATGGATGCCAAAGCTCTTGCAGCTTCTAAAAGCCATAGTGAAGCGGAGAGAAGAAGAAGAGAAAGAATCAATAATCATCTTGCTAAGCTCCGGAGCTTACTTCCTAGTACCACTAAAACAGACAAAGCTTCACTACTAGCAGAAGTAATACAACACGTGAAAGAGCTAAAACGGCAAACATCATTGATAGCAGAAACAAGTCCAATCCCAACAGACATCGACGAGCTAACAGTGGACGATGCCTCAGACGAGATGATGATCAACGGCGCCAAATTTGTAATAAAAGCTTCTCTTTGCTGTGAGGACCGTTCAGATCTCCTCCCTGACCTCATCAAAACACTGAAATCCTTGCGCTTAAGAACCCTCAAAGCTGAAATCACAACCCTTGGTGGGCGCGTGAGAAATGTGCTGTTTGTTACCGGTGAAGACGACGAGCCATCAACTGACCATAATAACAACGATAATAACAATAATAATAATAATCCCAATTCAGACAGCCAACAACAACAACAACAACATAGTATCAGCTCAATTCAAGAAGCATTGAAGGCTGTGATGGAAAAAACAGGACCGGATGATTCTTCGTCAGGAAACATTAAACGACAAAGAACAAATAACATCAATATCCTTTAA MRGEDQEQDHHHQHQGECSQTIENMFQEQLLLHQQLQNNTTDHIIYGDHHHHGAGRGLIFPADVVSPVLNSWPPLNPFLIPPPPPPPPPTSLCSSSSYGNLFNRRPANCLQFAYDGTSSADHLGRIISTTLGPVVHHGSTAPFGLQAELGKMSAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPTDIDELTVDDASDEMMINGAKFVIKASLCCEDRSDLLPDLIKTLKSLRLRTLKAEITTLGGRVRNVLFVTGEDDEPSTDHNNNDNNNNNNNPNSDSQQQQQQHSISSIQEALKAVMEKTGPDDSSSGNIKRQRTNNINIL Homology
BLAST of CmoCh18G010650 vs. ExPASy Swiss-Prot
Match: Q9S7Y1 (Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 9.9e-83 Identity = 207/390 (53.08%), Postives = 259/390 (66.41%), Query Frame = 0
BLAST of CmoCh18G010650 vs. ExPASy Swiss-Prot
Match: Q9LS08 (Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 4.2e-57 Identity = 170/372 (45.70%), Postives = 222/372 (59.68%), Query Frame = 0
BLAST of CmoCh18G010650 vs. ExPASy Swiss-Prot
Match: O80674 (Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.8e-31 Identity = 79/155 (50.97%), Postives = 113/155 (72.90%), Query Frame = 0
BLAST of CmoCh18G010650 vs. ExPASy Swiss-Prot
Match: Q9LET0 (Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.5e-25 Identity = 80/184 (43.48%), Postives = 116/184 (63.04%), Query Frame = 0
BLAST of CmoCh18G010650 vs. ExPASy Swiss-Prot
Match: Q9XEF0 (Transcription factor bHLH51 OS=Arabidopsis thaliana OX=3702 GN=BHLH51 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.6e-22 Identity = 59/132 (44.70%), Postives = 90/132 (68.18%), Query Frame = 0
BLAST of CmoCh18G010650 vs. ExPASy TrEMBL
Match: A0A6J1G0W5 (transcription factor bHLH30-like OS=Cucurbita moschata OX=3662 GN=LOC111449644 PE=4 SV=1) HSP 1 Score: 702.2 bits (1811), Expect = 1.1e-198 Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0
BLAST of CmoCh18G010650 vs. ExPASy TrEMBL
Match: A0A6J1HUT9 (transcription factor bHLH30-like OS=Cucurbita maxima OX=3661 GN=LOC111467674 PE=4 SV=1) HSP 1 Score: 672.2 bits (1733), Expect = 1.3e-189 Identity = 359/367 (97.82%), Postives = 360/367 (98.09%), Query Frame = 0
BLAST of CmoCh18G010650 vs. ExPASy TrEMBL
Match: A0A6J1GZ49 (transcription factor bHLH30-like OS=Cucurbita moschata OX=3662 GN=LOC111458472 PE=4 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 1.7e-141 Identity = 286/368 (77.72%), Postives = 309/368 (83.97%), Query Frame = 0
BLAST of CmoCh18G010650 vs. ExPASy TrEMBL
Match: A0A6J1J0R4 (transcription factor bHLH30-like OS=Cucurbita maxima OX=3661 GN=LOC111481602 PE=4 SV=1) HSP 1 Score: 509.2 bits (1310), Expect = 1.4e-140 Identity = 285/368 (77.45%), Postives = 309/368 (83.97%), Query Frame = 0
BLAST of CmoCh18G010650 vs. ExPASy TrEMBL
Match: A0A1S3BFZ7 (transcription factor bHLH30 OS=Cucumis melo OX=3656 GN=LOC103489248 PE=4 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 1.3e-138 Identity = 289/389 (74.29%), Postives = 316/389 (81.23%), Query Frame = 0
BLAST of CmoCh18G010650 vs. TAIR 10
Match: AT1G68810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 308.5 bits (789), Expect = 7.1e-84 Identity = 207/390 (53.08%), Postives = 259/390 (66.41%), Query Frame = 0
BLAST of CmoCh18G010650 vs. TAIR 10
Match: AT3G25710.1 (basic helix-loop-helix 32 ) HSP 1 Score: 223.4 bits (568), Expect = 3.0e-58 Identity = 170/372 (45.70%), Postives = 222/372 (59.68%), Query Frame = 0
BLAST of CmoCh18G010650 vs. TAIR 10
Match: AT2G41130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 138.3 bits (347), Expect = 1.3e-32 Identity = 79/155 (50.97%), Postives = 113/155 (72.90%), Query Frame = 0
BLAST of CmoCh18G010650 vs. TAIR 10
Match: AT3G56770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 118.6 bits (296), Expect = 1.0e-26 Identity = 80/184 (43.48%), Postives = 116/184 (63.04%), Query Frame = 0
BLAST of CmoCh18G010650 vs. TAIR 10
Match: AT2G40200.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 107.8 bits (268), Expect = 1.8e-23 Identity = 59/132 (44.70%), Postives = 90/132 (68.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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