CmoCh18G008600 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh18G008600
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptiontrihelix transcription factor ASIL2-like
LocationCmo_Chr18: 9929403 .. 9931813 (-)
RNA-Seq ExpressionCmoCh18G008600
SyntenyCmoCh18G008600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGTGTGCTCGTAAAACGTCTATCAAAATTTAGAATTAATACCCATTTATAGTTGGCCACTAGGAAGATATTCTCCAATTGTCTCTCAACAACGCTAGTGGTCATATTCCCAAAAGCTCAAACCTTTTGGTATTGGAAGATGTTAGCAGCTAATTAACAAAAGGGCAACTTAAAACCTAAACTCCCTCTTGCCCTAGCATGCAAACCCTTCTCTTCCATGGATATCAACCCCACTCCATCTCCACCCATCTCCGACACAAACCACCACCACCACCACCCTCCTCTTCCCTCCGCCGCCACGCACGGCGACCCTTCTCCAAAAAAAGCCCTTTCTTCCACGGTCGGTGACCGCCTCAAACGCGACGAATGGAGCGAAGGCGCGGTCGCCACCCTCTTGGAAGCATATGAATCCAAATGGGTTCTTAGAAATAGAGCCAAACTCAAAGGCCATGATTGGGAAGATGTGGCTCGTCATGTCTCTTCAAGGGCTAACTTCACCAAATCGCCTAAGACTCAAACGCAGTGTAAGAATAAAATTGAGTCCATGAAGAAGCGGTATCGTTCCGAATCGGCCTCCGCCGTTGACGCCGCCGCTGCTTCCTCCTCCTGGCCGTTGTATCATCGCCTTGATCTCTTGCTCCGGGGAAACACTCAACCACCTCCTCTTGCCACGTCGGTGATTCTGGTTGATGCGCCGCCGCCACCGCCGCCGCCTCCTCCGCCCTTCGAGGCGACGCTGAATTGTCTTGGATCTAATGGTGTTGATGGGATTATTCCAAAGGTGATTGATTTCTCTTTTGAACCACTTTTATTGGCTATAGCTCTTTGTCCCTTTTACTTTTCTTTTTTTAATTAATAAAATTATTTACAAATTTTATATATTTTTTAAAAAGATTAAACTTTTAATAATACCCTTAAAAGTTTATTATTTTAAAAAAATACCCTTAAATCTAAAAAAAAATTAAAATTAAAAAAATACCATTATTAATAGTTTATTTCAAACATTAAAAAATATATATATGTTAATATCCTTAAAACTTTTTAAAAAAATACAAAATTACCCTTACCGATAATACATGGAAAGAATTTTCAGTACCACGTTTTTTGAAATACCCATAAATTTTTAAAATTAGCATTAACACTCGTAATCTTTAAAATAAAATTAAAAAAAAAAAAGTTTAAAGGTATTTACCTTTAAAATAATCTATAAAGTATAGGTACGTGTTTCTGTCCATATAAACTTTTATTTATTATAAAGTTTAAGGGTATTAATGTCATTTTCAAAAGTTTACGAGTATTTTTTTTTTAACAGATAATACTAGCCGTAACAGTATTTTTAAATTTTTCAAGAGTTTGAATGGCATTAATGAAATTTTTAAAAGTTCAAGGGTATTTTTTAAACTGAACATTTTTTGGGAGCAGAACAGTATATTTGAAAGTTTTAAGGTATTTTTTGAGACAAATTGACATTATTAGCAGGAGGATAGAGTTGATGAAACAAGAGTATCAGATAAGGAGGAAAAGAACAAGAACAACAACAACAACGTTGTACTGGAGACAGATAGTAGCACACCAGCAATGCCATACAGCGACAACGAGAAGCTAAGATCGAAACAACAACCAAAAGCAAAGAAGACGAAGATGAAGAAGAAGAAGAAGAAGAAAACGAGGATGTCGGACGAGCTGGATGAGATCGCTAGCAGCATTCGGTGGCTAGCTGAGGTCGTGACGAGGTCGGAGCAAACGAGAATGGAGACGATGAGGGATATCGAAAGGATGAGAGCTGAAGCAGAGGCTAAAAGAGGAGAAATGGATCTGAAAAGAACAGAGATTATTGCTAACACTCAGCTGGAGATTGCTAAGCTCTTTGCAGCTGGTAGCAAGGCTGCTGATTCTTCATCAAGGATTGGGAGGCCCACTTCATTTAATTAAACAATCATCATTAATAATCATTACAAACCTTAATTTTATTCTTAACGAGCAACTTGTAGGTGTAACAGCCCCGATCCACCGTTAACAGATATTGTCCTTTTTGGGCTTTCTTTTTCGGGCTTCCTCTCAAGGCTTTAAAAGCTCTGTTTCCATCACAATCCACCCCCCTTCGAGACGCACGTCCTCGCTGGCACTCTTTTCTTCCTCCCATCATTGTGGGACCGACCCCAAATCCACCCCCCTTTGGGGCTAGCGTACTTACTGGCACCGCCTCGTGTCTACCCCCCTTCAGGGAACAGCGAGAAGGCTGACACATCGTCCGGTGTCTGGCTCTGATACCATTTGTAACAGCTCAGATTCACTACTAATAGATATTGTCCTCTTCGGTCCCCTCAAGGGATTAAAACGCGCTTGCTAGAGGAAGGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCTCAACCAATGTGGGAC

mRNA sequence

CTTGTGTGCTCGTAAAACGTCTATCAAAATTTAGAATTAATACCCATTTATAGTTGGCCACTAGGAAGATATTCTCCAATTGTCTCTCAACAACGCTAGTGGTCATATTCCCAAAAGCTCAAACCTTTTGGTATTGGAAGATGTTAGCAGCTAATTAACAAAAGGGCAACTTAAAACCTAAACTCCCTCTTGCCCTAGCATGCAAACCCTTCTCTTCCATGGATATCAACCCCACTCCATCTCCACCCATCTCCGACACAAACCACCACCACCACCACCCTCCTCTTCCCTCCGCCGCCACGCACGGCGACCCTTCTCCAAAAAAAGCCCTTTCTTCCACGGTCGGTGACCGCCTCAAACGCGACGAATGGAGCGAAGGCGCGGTCGCCACCCTCTTGGAAGCATATGAATCCAAATGGGTTCTTAGAAATAGAGCCAAACTCAAAGGCCATGATTGGGAAGATGTGGCTCGTCATGTCTCTTCAAGGGCTAACTTCACCAAATCGCCTAAGACTCAAACGCAGTGTAAGAATAAAATTGAGTCCATGAAGAAGCGGTATCGTTCCGAATCGGCCTCCGCCGTTGACGCCGCCGCTGCTTCCTCCTCCTGGCCGTTGTATCATCGCCTTGATCTCTTGCTCCGGGGAAACACTCAACCACCTCCTCTTGCCACGTCGGTGATTCTGGTTGATGCGCCGCCGCCACCGCCGCCGCCTCCTCCGCCCTTCGAGGCGACGCTGAATTGTCTTGGATCTAATGGTGTTGATGGGATTATTCCAAAGGAGGATAGAGTTGATGAAACAAGAGTATCAGATAAGGAGGAAAAGAACAAGAACAACAACAACAACGTTGTACTGGAGACAGATAGTAGCACACCAGCAATGCCATACAGCGACAACGAGAAGCTAAGATCGAAACAACAACCAAAAGCAAAGAAGACGAAGATGAAGAAGAAGAAGAAGAAGAAAACGAGGATGTCGGACGAGCTGGATGAGATCGCTAGCAGCATTCGGTGGCTAGCTGAGGTCGTGACGAGGTCGGAGCAAACGAGAATGGAGACGATGAGGGATATCGAAAGGATGAGAGCTGAAGCAGAGGCTAAAAGAGGAGAAATGGATCTGAAAAGAACAGAGATTATTGCTAACACTCAGCTGGAGATTGCTAAGCTCTTTGCAGCTGGTAGCAAGGCTGCTGATTCTTCATCAAGGATTGGGAGGCCCACTTCATTTAATTAAACAATCATCATTAATAATCATTACAAACCTTAATTTTATTCTTAACGAGCAACTTGTAGGTGTAACAGCCCCGATCCACCGTTAACAGATATTGTCCTTTTTGGGCTTTCTTTTTCGGGCTTCCTCTCAAGGCTTTAAAAGCTCTGTTTCCATCACAATCCACCCCCCTTCGAGACGCACGTCCTCGCTGGCACTCTTTTCTTCCTCCCATCATTGTGGGACCGACCCCAAATCCACCCCCCTTTGGGGCTAGCGTACTTACTGGCACCGCCTCGTGTCTACCCCCCTTCAGGGAACAGCGAGAAGGCTGACACATCGTCCGGTGTCTGGCTCTGATACCATTTGTAACAGCTCAGATTCACTACTAATAGATATTGTCCTCTTCGGTCCCCTCAAGGGATTAAAACGCGCTTGCTAGAGGAAGGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCTCAACCAATGTGGGAC

Coding sequence (CDS)

ATGGATATCAACCCCACTCCATCTCCACCCATCTCCGACACAAACCACCACCACCACCACCCTCCTCTTCCCTCCGCCGCCACGCACGGCGACCCTTCTCCAAAAAAAGCCCTTTCTTCCACGGTCGGTGACCGCCTCAAACGCGACGAATGGAGCGAAGGCGCGGTCGCCACCCTCTTGGAAGCATATGAATCCAAATGGGTTCTTAGAAATAGAGCCAAACTCAAAGGCCATGATTGGGAAGATGTGGCTCGTCATGTCTCTTCAAGGGCTAACTTCACCAAATCGCCTAAGACTCAAACGCAGTGTAAGAATAAAATTGAGTCCATGAAGAAGCGGTATCGTTCCGAATCGGCCTCCGCCGTTGACGCCGCCGCTGCTTCCTCCTCCTGGCCGTTGTATCATCGCCTTGATCTCTTGCTCCGGGGAAACACTCAACCACCTCCTCTTGCCACGTCGGTGATTCTGGTTGATGCGCCGCCGCCACCGCCGCCGCCTCCTCCGCCCTTCGAGGCGACGCTGAATTGTCTTGGATCTAATGGTGTTGATGGGATTATTCCAAAGGAGGATAGAGTTGATGAAACAAGAGTATCAGATAAGGAGGAAAAGAACAAGAACAACAACAACAACGTTGTACTGGAGACAGATAGTAGCACACCAGCAATGCCATACAGCGACAACGAGAAGCTAAGATCGAAACAACAACCAAAAGCAAAGAAGACGAAGATGAAGAAGAAGAAGAAGAAGAAAACGAGGATGTCGGACGAGCTGGATGAGATCGCTAGCAGCATTCGGTGGCTAGCTGAGGTCGTGACGAGGTCGGAGCAAACGAGAATGGAGACGATGAGGGATATCGAAAGGATGAGAGCTGAAGCAGAGGCTAAAAGAGGAGAAATGGATCTGAAAAGAACAGAGATTATTGCTAACACTCAGCTGGAGATTGCTAAGCTCTTTGCAGCTGGTAGCAAGGCTGCTGATTCTTCATCAAGGATTGGGAGGCCCACTTCATTTAATTAA

Protein sequence

MDINPTPSPPISDTNHHHHHPPLPSAATHGDPSPKKALSSTVGDRLKRDEWSEGAVATLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRANFTKSPKTQTQCKNKIESMKKRYRSESASAVDAAAASSSWPLYHRLDLLLRGNTQPPPLATSVILVDAPPPPPPPPPPFEATLNCLGSNGVDGIIPKEDRVDETRVSDKEEKNKNNNNNVVLETDSSTPAMPYSDNEKLRSKQQPKAKKTKMKKKKKKKTRMSDELDEIASSIRWLAEVVTRSEQTRMETMRDIERMRAEAEAKRGEMDLKRTEIIANTQLEIAKLFAAGSKAADSSSRIGRPTSFN
Homology
[Close]
BLAST of CmoCh18G008600 vs. ExPASy Swiss-Prot
Match: Q9LJG8 (Trihelix transcription factor ASIL2 OS=Arabidopsis thaliana OX=3702 GN=ASIL2 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-05
Identity = 81/334 (24.25%), Postives = 140/334 (41.92%), Query Frame = 0 

Query: 47  KRDEWSEGAVATLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRANFTKSPKTQTQCKNK 106
           + D WSE A A L++A+  +++  +R  LK   W++VA  VSSR ++ K PKT  QCKN+
Sbjct: 80  REDCWSEAATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVSSREDYGKIPKTDIQCKNR 139

Query: 107 IESMKKRYRSESASAVDAAAASSSWPLYHRLDLLLRGNTQPPPLATSVI------LVDAP 166
           I+++KK+Y+ E     +     S W  + +LD L+ G+T   P ATS +      L   P
Sbjct: 140 IDTVKKKYKQEKVRIAN-GGGRSRWVFFDKLDRLI-GSTAKIPTATSGVSGPVGGLHKIP 199

Query: 167 PPPP-------------PPPPPFE--------------ATLNCLGSNGVDG--------- 226
              P                PPF               A+    G  G  G         
Sbjct: 200 MGIPMGSRSNLYHQQAKAATPPFNNLDRLIGATARVSAASFGGSGGGGGGGSVNVPMGIP 259

Query: 227 --------------------IIPKEDRVDETRVSDKEEKNKNNNNNVVLETDSSTPAMPY 286
                                +P++ +         E K          ++DS + A   
Sbjct: 260 MSSRSAPFGQQGRTLPQQGRTLPQQQQQGMMVKRCSESKRWRFRKRNASDSDSESEA-AM 319

Query: 287 SDNEKLRSKQQPKAKKTKMKKKKKKK-TRMSDELDEIASSIRWLAEVVTRSEQTRMETMR 318
           SD+        P +K+ K ++KKK+    + ++  E+  +I    E   ++E  +++ + 
Sbjct: 320 SDDSGDSLPPPPLSKRMKTEEKKKQDGDGVGNKWRELTRAIMRFGEAYEQTENAKLQQVV 379

[Close]
BLAST of CmoCh18G008600 vs. ExPASy TrEMBL
Match: A0A6J1G0N7 (trihelix transcription factor ASIL2-like OS=Cucurbita moschata OX=3662 GN=LOC111449627 PE=4 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 3.7e-180
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0 

Query: 1   MDINPTPSPPISDTNHHHHHPPLPSAATHGDPSPKKALSSTVGDRLKRDEWSEGAVATLL 60
           MDINPTPSPPISDTNHHHHHPPLPSAATHGDPSPKKALSSTVGDRLKRDEWSEGAVATLL
Sbjct: 1   MDINPTPSPPISDTNHHHHHPPLPSAATHGDPSPKKALSSTVGDRLKRDEWSEGAVATLL 60

Query: 61  EAYESKWVLRNRAKLKGHDWEDVARHVSSRANFTKSPKTQTQCKNKIESMKKRYRSESAS 120
           EAYESKWVLRNRAKLKGHDWEDVARHVSSRANFTKSPKTQTQCKNKIESMKKRYRSESAS
Sbjct: 61  EAYESKWVLRNRAKLKGHDWEDVARHVSSRANFTKSPKTQTQCKNKIESMKKRYRSESAS 120

Query: 121 AVDAAAASSSWPLYHRLDLLLRGNTQPPPLATSVILVDAPPPPPPPPPPFEATLNCLGSN 180
           AVDAAAASSSWPLYHRLDLLLRGNTQPPPLATSVILVDAPPPPPPPPPPFEATLNCLGSN
Sbjct: 121 AVDAAAASSSWPLYHRLDLLLRGNTQPPPLATSVILVDAPPPPPPPPPPFEATLNCLGSN 180

Query: 181 GVDGIIPKEDRVDETRVSDKEEKNKNNNNNVVLETDSSTPAMPYSDNEKLRSKQQPKAKK 240
           GVDGIIPKEDRVDETRVSDKEEKNKNNNNNVVLETDSSTPAMPYSDNEKLRSKQQPKAKK
Sbjct: 181 GVDGIIPKEDRVDETRVSDKEEKNKNNNNNVVLETDSSTPAMPYSDNEKLRSKQQPKAKK 240

Query: 241 TKMKKKKKKKTRMSDELDEIASSIRWLAEVVTRSEQTRMETMRDIERMRAEAEAKRGEMD 300
           TKMKKKKKKKTRMSDELDEIASSIRWLAEVVTRSEQTRMETMRDIERMRAEAEAKRGEMD
Sbjct: 241 TKMKKKKKKKTRMSDELDEIASSIRWLAEVVTRSEQTRMETMRDIERMRAEAEAKRGEMD 300

Query: 301 LKRTEIIANTQLEIAKLFAAGSKAADSSSRIGRPTSFN 339
           LKRTEIIANTQLEIAKLFAAGSKAADSSSRIGRPTSFN
Sbjct: 301 LKRTEIIANTQLEIAKLFAAGSKAADSSSRIGRPTSFN 338

[Close]
BLAST of CmoCh18G008600 vs. ExPASy TrEMBL
Match: A0A6J1HV30 (uncharacterized protein LOC111466444 OS=Cucurbita maxima OX=3661 GN=LOC111466444 PE=4 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.4e-166
Identity = 324/341 (95.01%), Postives = 327/341 (95.89%), Query Frame = 0 

Query: 1   MDINPTPSPPISDTNHHHHHPPLPSAATHGDPSPKKALSSTVGDRLKRDEWSEGAVATLL 60
           MDINPTPSPPISDTNHHH   PLPSAATHGDPSP+KALSSTVGDRLKRDEWSEGAVATLL
Sbjct: 1   MDINPTPSPPISDTNHHHQ--PLPSAATHGDPSPRKALSSTVGDRLKRDEWSEGAVATLL 60

Query: 61  EAYESKWVLRNRAKLKGHDWEDVARHVSSRANFTKSPKTQTQCKNKIESMKKRYRSESAS 120
           EAYESKWVLRNRAKLKGHDWEDVARHVSSRANFTKSPKTQTQCKNKIESMKKRYRSESAS
Sbjct: 61  EAYESKWVLRNRAKLKGHDWEDVARHVSSRANFTKSPKTQTQCKNKIESMKKRYRSESAS 120

Query: 121 AVDAAAASSSWPLYHRLDLLLRGNTQPPPLATSVILVDAPPPPPPP---PPPFEATLNCL 180
           AVDAAAASSSWPLYHRLDLLLRGNTQPPPLATSVILVDA PPPPPP   PPPF ATLNCL
Sbjct: 121 AVDAAAASSSWPLYHRLDLLLRGNTQPPPLATSVILVDALPPPPPPPLSPPPFTATLNCL 180

Query: 181 GSNGVDGIIPKEDRVDETRVSDKEEKNKNNNNNVVLETDSSTPAMPYSDNEKLRSKQQPK 240
           GSNGVDGIIPKED VDETRVSDKEEKNKN +N VVLETDSSTPAMPYSDNEKLRSKQQPK
Sbjct: 181 GSNGVDGIIPKEDGVDETRVSDKEEKNKNKSNKVVLETDSSTPAMPYSDNEKLRSKQQPK 240

Query: 241 AKKTKMKKKKKKKTRMSDELDEIASSIRWLAEVVTRSEQTRMETMRDIERMRAEAEAKRG 300
           AKKT  KKKKKKKTRMSDELDEIASSIRWLAEVVTRSEQTRMETMRD+ERMRAEAEAKRG
Sbjct: 241 AKKT--KKKKKKKTRMSDELDEIASSIRWLAEVVTRSEQTRMETMRDMERMRAEAEAKRG 300

Query: 301 EMDLKRTEIIANTQLEIAKLFAAGSKAADSSSRIGRPTSFN 339
           EMDLKRTEIIANTQLEIAKLFAAG KAADSSSRIGRPTSFN
Sbjct: 301 EMDLKRTEIIANTQLEIAKLFAAGGKAADSSSRIGRPTSFN 337

[Close]
BLAST of CmoCh18G008600 vs. ExPASy TrEMBL
Match: A0A6J1GZB5 (trihelix transcription factor ASIL2 OS=Cucurbita moschata OX=3662 GN=LOC111458889 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 9.8e-104
Identity = 238/349 (68.19%), Postives = 264/349 (75.64%), Query Frame = 0 

Query: 1   MDINPTPSPPI-SDT-------NHHHHHPPLPSAATHGDPSPKKALSST--VGDRLKRDE 60
           M+I PTPS P+ S+T       NHHHHH P    A    PSPKK  +ST   GDRLKRDE
Sbjct: 1   MEIKPTPSSPLNSETTSPSLLFNHHHHHLPSAIDAAAETPSPKKPPASTTGAGDRLKRDE 60

Query: 61  WSEGAVATLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRANFTKSPKTQTQCKNKIESM 120
           WSEGAV+TLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRA+FTKSPKTQTQCKNKIESM
Sbjct: 61  WSEGAVSTLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRADFTKSPKTQTQCKNKIESM 120

Query: 121 KKRYRSESASAVDAAAASSSWPLYHRLDLLLRGN--TQPPPLATSVILVDAPPPPPPPPP 180
           KKRYRSESAS      A+SSWPLYHRL LLLRGN  T PPP  T VIL+D PPPPPP PP
Sbjct: 121 KKRYRSESAS------AASSWPLYHRLHLLLRGNTLTPPPPPPTPVILLD-PPPPPPAPP 180

Query: 181 PFEATLNCLGSNGVDGIIPKEDRVDETRVSDKEEKNKNNNNNVVLETDSSTPAMPYSDNE 240
           PF    N  GSNG D I PKED VD  R  D+ ++    +  +V+ETDSSTPA+ YSD +
Sbjct: 181 PFLPAQNSHGSNGGDRINPKEDGVDNGR-RDESDELSEKSKKMVIETDSSTPAIVYSDKD 240

Query: 241 K--LRSKQQPKAKKTKMKKKKKKKTRMS--DELDEIASSIRWLAEVVTRSEQTRMETMRD 300
           K  +R KQQ K K T   KKK K TR+S  D L++IA SIRWLAEVV RSEQ RME ++D
Sbjct: 241 KVSMRPKQQTKMKNT---KKKNKSTRLSAEDSLEQIAGSIRWLAEVVVRSEQARMEMIKD 300

Query: 301 IERMRAEAEAKRGEMDLKRTEIIANTQLEIAKLFAAGSKAADSSSRIGR 334
           IE+MRAEAEAKRGEMDLKRT+IIANTQLEIAKLFA+ +   DSS RIGR
Sbjct: 301 IEKMRAEAEAKRGEMDLKRTQIIANTQLEIAKLFASATNPIDSSPRIGR 338

[Close]
BLAST of CmoCh18G008600 vs. ExPASy TrEMBL
Match: A0A6J1JKX8 (trihelix transcription factor ASIL1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486128 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 4.2e-99
Identity = 223/317 (70.35%), Postives = 251/317 (79.18%), Query Frame = 0 

Query: 25  SAATHGDPSPKKALSST--VGDRLKRDEWSEGAVATLLEAYESKWVLRNRAKLKGHDWED 84
           +AA    PSPKK  +ST   GDRLKRDEWSEGAV+TLLEAYESKWVLRNRAKLKGHDWED
Sbjct: 199 AAAATETPSPKKTPASTTGAGDRLKRDEWSEGAVSTLLEAYESKWVLRNRAKLKGHDWED 258

Query: 85  VARHVSSRANFTKSPKTQTQCKNKIESMKKRYRSESASAVDAAAASSSWPLYHRLDLLLR 144
           VARHVSSRA+FTKSPKTQTQCKNKIESMKKRYRSESAS      A+SSWPLYHRL LLLR
Sbjct: 259 VARHVSSRADFTKSPKTQTQCKNKIESMKKRYRSESAS------AASSWPLYHRLHLLLR 318

Query: 145 GN--TQPPPLATSVILVDAPPPPPPPPPPFEATLNCLGSNGVDGIIPKEDRVDETRVSDK 204
           GN  T PPP  T VIL+D PPPPPP PPPF    N  GSNGVD I PKED VD  R ++ 
Sbjct: 319 GNTLTPPPPPPTPVILLD-PPPPPPAPPPFLPAQNSHGSNGVDRINPKEDGVDNGRRNES 378

Query: 205 EEKNKNNNNNVVLETDSSTPAMPYSDNEK--LRSKQQPKAKKTKMKKKKKKKTRMS--DE 264
           +E ++  +  +V+ETDSSTPA+ YSD +K  +R KQQ K K +   KKK K TR+S  D 
Sbjct: 379 DELSE-RSKKMVIETDSSTPAIVYSDKDKVSMRPKQQTKMKNS---KKKNKSTRLSSEDS 438

Query: 265 LDEIASSIRWLAEVVTRSEQTRMETMRDIERMRAEAEAKRGEMDLKRTEIIANTQLEIAK 324
           L++IA SIRWLA+VV RSEQ RME ++DIE+MRAEAEAKRGEMDLKRT+IIANTQLEIAK
Sbjct: 439 LEQIAGSIRWLAKVVVRSEQARMEMIKDIEKMRAEAEAKRGEMDLKRTQIIANTQLEIAK 498

Query: 325 LFAAGSKAADSSSRIGR 334
           LFA+ +K  DSS RIGR
Sbjct: 499 LFASATKPIDSSLRIGR 504

[Close]
BLAST of CmoCh18G008600 vs. ExPASy TrEMBL
Match: A0A2I4GZU6 (zinc finger homeobox protein 4-like OS=Juglans regia OX=51240 GN=LOC109012308 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 5.0e-84
Identity = 207/328 (63.11%), Postives = 232/328 (70.73%), Query Frame = 0 

Query: 32  PSPKKALSSTVG--DRLKRDEWSEGAVATLLEAYESKWVLRNRAKLKGHDWEDVARHVSS 91
           P P  A + T G  DRLKRDEWSEGAV++LLEAYE+KWVLRNRAKLKGHDWEDVARHVSS
Sbjct: 34  PPPPAAAAPTGGGSDRLKRDEWSEGAVSSLLEAYETKWVLRNRAKLKGHDWEDVARHVSS 93

Query: 92  RANFTKSPKTQTQCKNKIESMKKRYRSESASAVDAAAASSSWPLYHRLDLLLRGN----- 151
           RAN TKSPKTQTQCKNKIESMKKRYRSES++     A  SSWPLY RLDLLLRG+     
Sbjct: 94  RANCTKSPKTQTQCKNKIESMKKRYRSESST-----ADPSSWPLYPRLDLLLRGSGPLQV 153

Query: 152 ----------TQPPP-------LATSVILVDAPPPP--PPPPPPFEATLNCLGSNGVDGI 211
                     + PPP       L  S + V  PPPP  PPPPP      N  GSNG+D  
Sbjct: 154 SPPPPTPTPASHPPPPNAPLMLLEPSPVAVQPPPPPPLPPPPPQLGVAQNSHGSNGIDR- 213

Query: 212 IPKEDRVDETRVSDKEEKNKNNNNNVVLETDSSTPAMPYSDNEKLRSKQQPKAKKTKMKK 271
           + KED    T++SD +E +KN+     +ETDSSTPA+ YSD +K RS      KK KMK 
Sbjct: 214 VAKEDGAG-TKLSD-QESDKNH-----METDSSTPAL-YSDKDKSRS------KKMKMKM 273

Query: 272 KKKKKTRMSDELDEIASSIRWLAEVVTRSEQTRMETMRDIERMRAEAEAKRGEMDLKRTE 331
           +KKKK+R   E  E+A SIRWLAEVV RSEQ RMETMR+IERMR EAEAKRGEMDLKRTE
Sbjct: 274 EKKKKSRRRPEESEVAESIRWLAEVVVRSEQARMETMREIERMRVEAEAKRGEMDLKRTE 333

Query: 332 IIANTQLEIAKLFAAGSKAADSSSRIGR 334
           I+ANTQLEIA+LFA   K  DSS RIGR
Sbjct: 334 ILANTQLEIARLFAGIGKGVDSSLRIGR 341

[Close]
BLAST of CmoCh18G008600 vs. TAIR 10
Match: AT3G54390.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 281.2 bits (718), Expect = 1.1e-75
Identity = 187/314 (59.55%), Postives = 215/314 (68.47%), Query Frame = 0 

Query: 29  HGDPSPKKALSSTVGDRLKRDEWSEGAVATLLEAYESKWVLRNRAKLKGHDWEDVARHVS 88
           H +   K + SS V DRLKRDEWSEGAV+TLLEAYESKWVLRNRAKLKG DWEDVA+HVS
Sbjct: 16  HDESLKKPSASSVVVDRLKRDEWSEGAVSTLLEAYESKWVLRNRAKLKGQDWEDVAKHVS 75

Query: 89  SRANFTKSPKTQTQCKNKIESMKKRYRSESASAVDAAAASSSWPLYHRLDLLLRGNTQPP 148
           SRA  TKSPKTQTQCKNKIESMKKRYRSESA+     A  SSWPLY RLD LLRG TQP 
Sbjct: 76  SRATHTKSPKTQTQCKNKIESMKKRYRSESAT-----ADGSSWPLYPRLDHLLRG-TQPQ 135

Query: 149 PLATSVILVDAPPP----PPPPPPPFEATLNCLGSNGVDGIIPKEDRVDETRVSDKEEKN 208
           P   +V+ ++   P     PP P          GSNGV G IPKED     +  +K EK+
Sbjct: 136 PQPQAVLPLNCSVPLLLLEPPLPAVAHPPQISYGSNGV-GKIPKEDGF---KPENKPEKD 195

Query: 209 KNNNNNVVLETDSSTPAMPYSDNEKLRSKQQPKAKKTKMKKKKKKKTRMSDELDEIASSI 268
                   ++TDSSTP +                 KTK++ KK K+ R  +E +EIA SI
Sbjct: 196 AE------MDTDSSTPVV-----------------KTKVRGKKVKR-RYKEEKEEIAGSI 255

Query: 269 RWLAEVVTRSEQTRMETMRDIERMRAEAEAKRGEMDLKRTEIIANTQLEIAKLFAAG--- 328
           RWLAEVV RSE+ RMETM++IERMRAEAEAKRGE+DLKRTEI+ANTQLEIA++FAA    
Sbjct: 256 RWLAEVVMRSERARMETMKEIERMRAEAEAKRGELDLKRTEIMANTQLEIARIFAAAASS 295

Query: 329 --SKAADSSSRIGR 334
             +K  DSS RIGR
Sbjct: 316 GQNKGVDSSLRIGR 295

[Close]
BLAST of CmoCh18G008600 vs. TAIR 10
Match: AT3G10030.1 (aspartate/glutamate/uridylate kinase family protein )

HSP 1 Score: 85.1 bits (209), Expect = 1.2e-16
Identity = 44/105 (41.90%), Postives = 63/105 (60.00%), Query Frame = 0 

Query: 34  PKKALSSTVGDRLKRDEWSEGAVATLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRANF 93
           P+ + SS    R  R+EWS+ A+A LL+AY  K+   NR  L+G DWE+VA  VS R   
Sbjct: 144 PRTSSSSAGEYRKDREEWSDAAIACLLDAYSDKFTQLNRGNLRGRDWEEVASSVSERCE- 203

Query: 94  TKSPKTQTQCKNKIESMKKRYRSESASAVDAAAASSSWPLYHRLD 139
            K  K+  QCKNKI+++KKRY+ E         A+S WP + +++
Sbjct: 204 -KLSKSVEQCKNKIDNLKKRYKLERHRMSSGGTAASHWPWFKKME 246

[Close]
BLAST of CmoCh18G008600 vs. TAIR 10
Match: AT3G10030.2 (aspartate/glutamate/uridylate kinase family protein )

HSP 1 Score: 85.1 bits (209), Expect = 1.2e-16
Identity = 44/105 (41.90%), Postives = 63/105 (60.00%), Query Frame = 0 

Query: 34  PKKALSSTVGDRLKRDEWSEGAVATLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRANF 93
           P+ + SS    R  R+EWS+ A+A LL+AY  K+   NR  L+G DWE+VA  VS R   
Sbjct: 144 PRTSSSSAGEYRKDREEWSDAAIACLLDAYSDKFTQLNRGNLRGRDWEEVASSVSERCE- 203

Query: 94  TKSPKTQTQCKNKIESMKKRYRSESASAVDAAAASSSWPLYHRLD 139
            K  K+  QCKNKI+++KKRY+ E         A+S WP + +++
Sbjct: 204 -KLSKSVEQCKNKIDNLKKRYKLERHRMSSGGTAASHWPWFKKME 246

[Close]
BLAST of CmoCh18G008600 vs. TAIR 10
Match: AT5G05550.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14
Identity = 74/270 (27.41%), Postives = 123/270 (45.56%), Query Frame = 0 

Query: 47  KRDEWSEGAVATLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRANFTKSPKTQTQCKNK 106
           + D WSE A ATL+EA+ +++V  N   L+ +DW+DVA  V+SR       KT  QCKN+
Sbjct: 20  REDWWSEEATATLVEAWGNRYVKLNHGNLRQNDWKDVADAVNSRHGDNSRKKTDLQCKNR 79

Query: 107 IESMKKRYRSESASAVDAAAASSSWPLYHRLDLLLRGNTQPPPLATSVILVDAPPPPPPP 166
           ++++KK+Y++E A       + S+W  Y+RLD+L+    +    A  V+           
Sbjct: 80  VDTLKKKYKTEKAK-----LSPSTWRFYNRLDVLIGPVVKKS--AGGVV----------K 139

Query: 167 PPPFEATLNCLGSNGVDGIIPKEDRVDETRVSDKEEKNKNNNNNVVLETDSSTPAMPYSD 226
             PF+  LN  GSN     +  +D  D+  V D E                         
Sbjct: 140 SAPFKNHLNPTGSNSTGSSLEDDDE-DDDEVGDWE------------------------- 199

Query: 227 NEKLRSKQQPKAKKTKMKKKKKKKTRMSDELDEIASSIRWLAEVVTRSEQTRMETMRDIE 286
                +++ P+ ++  + +             E+A++I    EV  R E  + + M ++E
Sbjct: 200 ---FVARKHPRVEEVDLSE--------GSTCRELATAILKFGEVYERIEGKKQQMMIELE 232

Query: 287 RMRAEAEAKRGEMDLKRTEIIANTQLEIAK 317
           + R E      E++LKR  ++   QLEI K
Sbjct: 260 KQRMEVTK---EVELKRMNMLMEMQLEIEK 232

[Close]
BLAST of CmoCh18G008600 vs. TAIR 10
Match: AT5G05550.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14
Identity = 74/270 (27.41%), Postives = 123/270 (45.56%), Query Frame = 0 

Query: 47  KRDEWSEGAVATLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRANFTKSPKTQTQCKNK 106
           + D WSE A ATL+EA+ +++V  N   L+ +DW+DVA  V+SR       KT  QCKN+
Sbjct: 20  REDWWSEEATATLVEAWGNRYVKLNHGNLRQNDWKDVADAVNSRHGDNSRKKTDLQCKNR 79

Query: 107 IESMKKRYRSESASAVDAAAASSSWPLYHRLDLLLRGNTQPPPLATSVILVDAPPPPPPP 166
           ++++KK+Y++E A       + S+W  Y+RLD+L+    +    A  V+           
Sbjct: 80  VDTLKKKYKTEKAK-----LSPSTWRFYNRLDVLIGPVVKKS--AGGVV----------K 139

Query: 167 PPPFEATLNCLGSNGVDGIIPKEDRVDETRVSDKEEKNKNNNNNVVLETDSSTPAMPYSD 226
             PF+  LN  GSN     +  +D  D+  V D E                         
Sbjct: 140 SAPFKNHLNPTGSNSTGSSLEDDDE-DDDEVGDWE------------------------- 199

Query: 227 NEKLRSKQQPKAKKTKMKKKKKKKTRMSDELDEIASSIRWLAEVVTRSEQTRMETMRDIE 286
                +++ P+ ++  + +             E+A++I    EV  R E  + + M ++E
Sbjct: 200 ---FVARKHPRVEEVDLSE--------GSTCRELATAILKFGEVYERIEGKKQQMMIELE 232

Query: 287 RMRAEAEAKRGEMDLKRTEIIANTQLEIAK 317
           + R E      E++LKR  ++   QLEI K
Sbjct: 260 KQRMEVTK---EVELKRMNMLMEMQLEIEK 232

The following BLAST results are available for this feature:
BLAST of CmoCh18G008600 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LJG81.2e-0524.25Trihelix transcription factor ASIL2 OS=Arabidopsis thaliana OX=3702 GN=ASIL2 PE=... [more]
BLAST of CmoCh18G008600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G0N73.7e-180100.00trihelix transcription factor ASIL2-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1HV302.4e-16695.01uncharacterized protein LOC111466444 OS=Cucurbita maxima OX=3661 GN=LOC111466444... [more]
A0A6J1GZB59.8e-10468.19trihelix transcription factor ASIL2 OS=Cucurbita moschata OX=3662 GN=LOC11145888... [more]
A0A6J1JKX84.2e-9970.35trihelix transcription factor ASIL1-like isoform X1 OS=Cucurbita maxima OX=3661 ... [more]
A0A2I4GZU65.0e-8463.11zinc finger homeobox protein 4-like OS=Juglans regia OX=51240 GN=LOC109012308 PE... [more]
BLAST of CmoCh18G008600 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G54390.11.1e-7559.55sequence-specific DNA binding transcription factors [more]
AT3G10030.11.2e-1641.90aspartate/glutamate/uridylate kinase family protein [more]
AT3G10030.21.2e-1641.90aspartate/glutamate/uridylate kinase family protein [more]
AT5G05550.11.1e-1427.41sequence-specific DNA binding transcription factors [more]
AT5G05550.21.1e-1427.41sequence-specific DNA binding transcription factors [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 285..305
NoneNo IPR availableGENE3D1.10.10.60coord: 51..116
e-value: 5.9E-7
score: 31.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..250
NoneNo IPR availablePANTHERPTHR31307:SF7SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTORcoord: 32..330
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 160..255
IPR044822Myb/SANT-like DNA-binding domain 4PFAMPF13837Myb_DNA-bind_4coord: 48..138
e-value: 7.0E-20
score: 71.2
IPR044823Trihelix transcription factor ASIL1/2-likePANTHERPTHR31307TRIHELIX TRANSCRIPTION FACTOR ASIL2coord: 32..330

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G008600.1CmoCh18G008600.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0000976 transcription cis-regulatory region binding