CmoCh18G008480 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGAAGAGAAAAGGTCTAGAAGCTCTCTATTTATACCTAAAACTCCACCGCTCCTTCTTCTCTCTCTCTCTCTCTCGCTTCGGATCAAATGGAGACACTGGCCGCCGCCATTGCTTCGATTCTGCTCTCCTTCCTTCTGATTCCGCCTTCCGCCGCCGCTTCTCGCAAGCTCCGCCCTCAAGACCGCCGGAATCTCCTCGCCAATGCTCTCGCCTCCACTCCTCCCATGGGGTTCCAACTCCCTTTCCTCCTCCTTTAATTTCTCTTTAATTTCTTTCTATTCATTTTTTCGCTTTGTTTTGTAGATGGAACAGTTGGAATCACTTCCGGTGCGGCATTAGCGAGACCATCGTCAAGCAAAACGGTGTCGTTTTCATTTACTCTCTTTATTTTCTAATATTTATTAATCGTTTTTTCTTTTTTTAATAATTAAATAAATAAAATAATTCTACAGCTCATCTTCTTGTTTCCACTGGCCTCTCCAAGCTTGGATACGTCTACGTTAACATAGGTAAAAATAAAATTTAAAATATTTTTATTTTTTTTTCTTAGTAATTGTAAATTTGTTTTTACCCGACTAAAACGCAGTCGTTTTTAGATGATTAAATAAACAAAGAATATTCTTTCCATTGATTTGAGGTCTTTTAGAGAAGCACAAAGCAAAACCATGAAAGTTTATGCTCAAAATAGACAATACATACTATTGTGGAGAGTCGTGTTCGTCTAACATGATCAAAACCATGTCCTAAACTTAGTTTATGCCAATAGAATGGAGTCGCCTCCTCGAAGGCCGTCAAAAAATGACTAGGGCTCCAAGGAGTCTAGCCTCGATTAAGGGGAGGTGTTTGGAGGTGTTACACGATGGAAATCCCACGTAGCTTACTCATTGTGGTGCGGAGAGTCTGTTAAACATAAATAATAAATAAATATATTTTTTTTTGCTTGGGATATTTTAAATATAAATTATATAAAAAATGGAAATTATTCATTAAAAATTTTAAAATATATATATTTTTTAACTGTAAATTTTTTTATTAAATTATTTGAAAAATTGCACCAAATAGTATTATTATTATTATTATTTTAATTTAATATAAATTTTGTAGGGATATTTGGTGCCAAAGAAGGCCACATTTCCATCTGGAATTAAATCCCTAGCAGATTACGTTCATAACAAGGGCTTAAAGCTTGGAATTTACTCTGATTCCGGGTAAATCCCACCCTCTTTCATCTTCCTTTTTTCCCTTTTTCCAATTTTAACCCCACGGTGAATTTCCCTCCAGCACATTTACCTGCAGTAAAACCATGCCCGGTTCACTATACCACGAAGAACAAGACGCCAAAACCTTCGCCAACTGGGTATATAAATTAAAACGCCTTTTTATTATAATTATTTATAAATTAATTGGAAATTCATTATTATTTGTTTTAAATTAATAGGGAGTTGACTATTTAAAGTATGATAACTGTAACAACGACAACATTAAGCCAACGGAGAGGTGGGCATTATGGTAATTTAGACACTTTTTTATTTTTAAAAACCCAAAACTCAAAATTTATTAATTTAATTTCCTCTCTTTTTAAAGATATCCCATAATGACAAGAGCTCTGATGAAGGCAGGACGGCCCATTTTCCTATCGCTATGCGAAGGGTAAATTAAATACTTTATTATATTATAACATTTATTTTATTTTATTTTTAATTATAATTAATTCCTAATCTTACGTTTAAAACAGTGGCGACATGCATCCTGCCATGTGGGGTGCTGACGTGGCAAACAGTTGGAGAACCACCAGTGACATCGAGGACAATTGGGACAGGTAGGATTATAGTTTTAATTTATATTAATTAATTAATTCTCATTTAATAATTTATTTTATTTTAACAGATGAGCAGAGCCGACTTGAACGATGCCTTTGCAGAGTATGCAAGGCCTGGTGGTTGGAATGGTCAGTTTTATTAATAAATAAATAATTAATTATATATGTGTATATATATTAAAAATATATATTTAATTATTTAATTATTAGATCCTGACATGCTTGAAGTTGGAAATGGAGGGATGACTAAGGAAGAGTACAGAGTCCACTTCAGCATATGGGCCATTTCTAAGGTCATTTCCTCAGGCCCAAAGCAATAAAAATAATAATTTTTTATTTTATTTTTTTAATTTTTATTTATTTTTACAAAATTGGCCTCAGGCTCCACTTCTCTTGGGTAATGATCTGAGGGAGATTTCCGAGGACCCAATGGAAATAATTGGGAATTCTGAGGTTATTTCTGTAAATCAAGGTAAATTTAATTCTATTATTATTATTTGGAATTATATTTAAAAAAAACATTTTTGGACTAAAATTGGTTACGTTTTGGTAGATCCTCTGGGTGTCCAAGCTAAGAAGGTTAGAAGCGGACACGTGGAGGTAATTAAAATAGACAAATTTATTAATTATTATTTTTTAAATTTAGAGATAATAAATTAAAAAAAGGGTAAAAAAAAAAAATGGAACAGGTTTGGGCTGGGCCTTTATCTGGATACAGAGTGGCGGTTCTGTTGGTGAACAGAAGGAAATGGAGGATGGCAGGTAGGGCCTATTGGGACGACATCGGCATTCCTAACGACACTGTCGTTCAGGCGAGAGATCTCCTATTATAGTTTTGTCGGGAGAGTTATCTCGTACCCTTAGGTATTTTCTACATACCCACCTGTGTCGGTTTTAGATACAGGTACCCTTTTGTTGAAAGTCGTTCGAGCTTTTCCTGAGAATATGGCATGAGTTACTTTAGCGAGCGCATGGTAATCAAACATTGGTGAGAGGTATTTTCTACATACCCACCTGTGTCGGTTTTATATACAGGTACCCTTTTGTTGAAGTCGTTCGAGCTTTTCCTGGGAATATGGCATGA TGAAGAGAAAAGGTCTAGAAGCTCTCTATTTATACCTAAAACTCCACCGCTCCTTCTTCTCTCTCTCTCTCTCTCGCTTCGGATCAAATGGAGACACTGGCCGCCGCCATTGCTTCGATTCTGCTCTCCTTCCTTCTGATTCCGCCTTCCGCCGCCGCTTCTCGCAAGCTCCGCCCTCAAGACCGCCGGAATCTCCTCGCCAATGCTCTCGCCTCCACTCCTCCCATGGGATGGAACAGTTGGAATCACTTCCGGTGCGGCATTAGCGAGACCATCGTCAAGCAAAACGCTCATCTTCTTGTTTCCACTGGCCTCTCCAAGCTTGGATACGTCTACGTTAACATAGATTACGTTCATAACAAGGGCTTAAAGCTTGGAATTTACTCTGATTCCGGCACATTTACCTGCAGTAAAACCATGCCCGGTTCACTATACCACGAAGAACAAGACGCCAAAACCTTCGCCAACTGGGGAGTTGACTATTTAAAGTATGATAACTGTAACAACGACAACATTAAGCCAACGGAGAGATATCCCATAATGACAAGAGCTCTGATGAAGGCAGGACGGCCCATTTTCCTATCGCTATGCGAAGGTGGCGACATGCATCCTGCCATGTGGGGTGCTGACGTGGCAAACAGTTGGAGAACCACCAGTGACATCGAGGACAATTGGGACAGAGCCGACTTGAACGATGCCTTTGCAGAGTATGCAAGGCCTGGTGGTTGGAATGATCCTGACATGCTTGAAGTTGGAAATGGAGGGATGACTAAGGAAGAGTACAGAGTCCACTTCAGCATATGGGCCATTTCTAAGGCTCCACTTCTCTTGGGTAATGATCTGAGGGAGATTTCCGAGGACCCAATGGAAATAATTGGGAATTCTGAGGTTATTTCTGTAAATCAAGATCCTCTGGGTGTCCAAGCTAAGAAGGTTAGAAGCGGACACGTGGAGGTTTGGGCTGGGCCTTTATCTGGATACAGAGTGGCGGTTCTGTTGGTGAACAGAAGGAAATGGAGGATGGCAGTTTTGTCGGGAGAGTTATCTCGTACCCTTAGGTACCCTTTTGTTGAAGTCGTTCGAGCTTTTCCTGGGAATATGGCATGA ATGGAGACACTGGCCGCCGCCATTGCTTCGATTCTGCTCTCCTTCCTTCTGATTCCGCCTTCCGCCGCCGCTTCTCGCAAGCTCCGCCCTCAAGACCGCCGGAATCTCCTCGCCAATGCTCTCGCCTCCACTCCTCCCATGGGATGGAACAGTTGGAATCACTTCCGGTGCGGCATTAGCGAGACCATCGTCAAGCAAAACGCTCATCTTCTTGTTTCCACTGGCCTCTCCAAGCTTGGATACGTCTACGTTAACATAGATTACGTTCATAACAAGGGCTTAAAGCTTGGAATTTACTCTGATTCCGGCACATTTACCTGCAGTAAAACCATGCCCGGTTCACTATACCACGAAGAACAAGACGCCAAAACCTTCGCCAACTGGGGAGTTGACTATTTAAAGTATGATAACTGTAACAACGACAACATTAAGCCAACGGAGAGATATCCCATAATGACAAGAGCTCTGATGAAGGCAGGACGGCCCATTTTCCTATCGCTATGCGAAGGTGGCGACATGCATCCTGCCATGTGGGGTGCTGACGTGGCAAACAGTTGGAGAACCACCAGTGACATCGAGGACAATTGGGACAGAGCCGACTTGAACGATGCCTTTGCAGAGTATGCAAGGCCTGGTGGTTGGAATGATCCTGACATGCTTGAAGTTGGAAATGGAGGGATGACTAAGGAAGAGTACAGAGTCCACTTCAGCATATGGGCCATTTCTAAGGCTCCACTTCTCTTGGGTAATGATCTGAGGGAGATTTCCGAGGACCCAATGGAAATAATTGGGAATTCTGAGGTTATTTCTGTAAATCAAGATCCTCTGGGTGTCCAAGCTAAGAAGGTTAGAAGCGGACACGTGGAGGTTTGGGCTGGGCCTTTATCTGGATACAGAGTGGCGGTTCTGTTGGTGAACAGAAGGAAATGGAGGATGGCAGTTTTGTCGGGAGAGTTATCTCGTACCCTTAGGTACCCTTTTGTTGAAGTCGTTCGAGCTTTTCCTGGGAATATGGCATGA METLAAAIASILLSFLLIPPSAAASRKLRPQDRRNLLANALASTPPMGWNSWNHFRCGISETIVKQNAHLLVSTGLSKLGYVYVNIDYVHNKGLKLGIYSDSGTFTCSKTMPGSLYHEEQDAKTFANWGVDYLKYDNCNNDNIKPTERYPIMTRALMKAGRPIFLSLCEGGDMHPAMWGADVANSWRTTSDIEDNWDRADLNDAFAEYARPGGWNDPDMLEVGNGGMTKEEYRVHFSIWAISKAPLLLGNDLREISEDPMEIIGNSEVISVNQDPLGVQAKKVRSGHVEVWAGPLSGYRVAVLLVNRRKWRMAVLSGELSRTLRYPFVEVVRAFPGNMA Homology
BLAST of CmoCh18G008480 vs. ExPASy Swiss-Prot
Match: Q9FT97 (Alpha-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=AGAL1 PE=2 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 8.5e-121 Identity = 212/336 (63.10%), Postives = 249/336 (74.11%), Query Frame = 0
BLAST of CmoCh18G008480 vs. ExPASy Swiss-Prot
Match: Q42656 (Alpha-galactosidase OS=Coffea arabica OX=13443 PE=1 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 8.8e-110 Identity = 189/310 (60.97%), Postives = 226/310 (72.90%), Query Frame = 0
BLAST of CmoCh18G008480 vs. ExPASy Swiss-Prot
Match: Q8RX86 (Alpha-galactosidase 2 OS=Arabidopsis thaliana OX=3702 GN=AGAL2 PE=1 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 2.0e-106 Identity = 185/309 (59.87%), Postives = 219/309 (70.87%), Query Frame = 0
BLAST of CmoCh18G008480 vs. ExPASy Swiss-Prot
Match: P14749 (Alpha-galactosidase OS=Cyamopsis tetragonoloba OX=3832 PE=1 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 9.4e-104 Identity = 185/317 (58.36%), Postives = 218/317 (68.77%), Query Frame = 0
BLAST of CmoCh18G008480 vs. ExPASy Swiss-Prot
Match: Q9FXT4 (Alpha-galactosidase OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0493600 PE=1 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 2.0e-98 Identity = 188/349 (53.87%), Postives = 226/349 (64.76%), Query Frame = 0
BLAST of CmoCh18G008480 vs. ExPASy TrEMBL
Match: A0A6J1G1S0 (Alpha-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111449899 PE=3 SV=1) HSP 1 Score: 580.1 bits (1494), Expect = 6.0e-162 Identity = 291/323 (90.09%), Postives = 294/323 (91.02%), Query Frame = 0
BLAST of CmoCh18G008480 vs. ExPASy TrEMBL
Match: A0A540MM48 (Pyruvate kinase OS=Malus baccata OX=106549 GN=C1H46_014596 PE=3 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.7e-127 Identity = 231/329 (70.21%), Postives = 253/329 (76.90%), Query Frame = 0
BLAST of CmoCh18G008480 vs. ExPASy TrEMBL
Match: A0A5N5L969 (Alpha-galactosidase OS=Salix brachista OX=2182728 GN=DKX38_016735 PE=3 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 3.7e-127 Identity = 222/321 (69.16%), Postives = 248/321 (77.26%), Query Frame = 0
BLAST of CmoCh18G008480 vs. ExPASy TrEMBL
Match: A0A6N2LC77 (Alpha-galactosidase OS=Salix viminalis OX=40686 GN=SVIM_LOCUS208977 PE=3 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 4.8e-127 Identity = 223/321 (69.47%), Postives = 248/321 (77.26%), Query Frame = 0
BLAST of CmoCh18G008480 vs. ExPASy TrEMBL
Match: A0A4U5R207 (Alpha-galactosidase OS=Populus alba OX=43335 GN=D5086_0000020620 PE=3 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 2.6e-125 Identity = 220/317 (69.40%), Postives = 244/317 (76.97%), Query Frame = 0
BLAST of CmoCh18G008480 vs. TAIR 10
Match: AT5G08380.1 (alpha-galactosidase 1 ) HSP 1 Score: 434.9 bits (1117), Expect = 6.0e-122 Identity = 212/336 (63.10%), Postives = 249/336 (74.11%), Query Frame = 0
BLAST of CmoCh18G008480 vs. TAIR 10
Match: AT5G08370.1 (alpha-galactosidase 2 ) HSP 1 Score: 387.1 bits (993), Expect = 1.4e-107 Identity = 185/309 (59.87%), Postives = 219/309 (70.87%), Query Frame = 0
BLAST of CmoCh18G008480 vs. TAIR 10
Match: AT5G08370.2 (alpha-galactosidase 2 ) HSP 1 Score: 387.1 bits (993), Expect = 1.4e-107 Identity = 185/309 (59.87%), Postives = 219/309 (70.87%), Query Frame = 0
BLAST of CmoCh18G008480 vs. TAIR 10
Match: AT3G56310.2 (Melibiase family protein ) HSP 1 Score: 360.1 bits (923), Expect = 1.9e-99 Identity = 178/310 (57.42%), Postives = 216/310 (69.68%), Query Frame = 0
BLAST of CmoCh18G008480 vs. TAIR 10
Match: AT3G56310.1 (Melibiase family protein ) HSP 1 Score: 350.9 bits (899), Expect = 1.1e-96 Identity = 178/334 (53.29%), Postives = 216/334 (64.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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