CmoCh18G007660 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh18G007660
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionRING-type domain-containing protein
LocationCmo_Chr18: 9245137 .. 9249611 (+)
RNA-Seq ExpressionCmoCh18G007660
SyntenyCmoCh18G007660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACCCTCAACGGATTAGCCTTCATTTTTTAGGATTTTTGAAGATGGGTCTCTCAAATTTCCCCCCGTCAGCTGAAGGAGTGTTGCTGTTACCAGTTCTAGTGATGAACACAGTCATGTCGATGGCTTTCTTGAAGAACTTGGTGAGATCTGTGCTACAAATGATGAGCGCCAACCCCTCGAGTTCTGCGGATGAATATGAACAGGAGAGTGGAAGAGTAAGAAGAATCTCCATTACCCATTTCAAATCCTTACGCCAAAGCTTCAATGGCGGAACAGAGACTGATAATTGCTCTGTTTCGAGGTGTTCTGTGGCAGAGTGCTCTGTTTGTCTGTGTGGATTTGAAGCTGACGAGGAAGTTAGTGAGTTGTCTTGTAAGCATTTTTTTCATAAATGTTGTCTTTCTAAATGGTTTGATAATCAGCATGTTACTTGCCCTCTCTGTCGCTCCACTCAATAGAACGCAACTTTTTTTTAAGGAAATTTTTGTGTTCTGTTCTTTTTCTTGCTGTTTGAGCTGAAGGGTATGAATGATTCACTGTTTTATTGAGCTTCTGGCTAAACTGAAAACACCCGGAAATGAATTAGAATTATTGAGAGAAGTAGTCCGGCATTGGCTAAGAGGAAGATCGTGGTTAAGTAAAGGAGTACTATCTCCATCTGTATCCGTATGAGACCTTTTGGAAAACTAAAGGCAAAGTTATGCGAGTTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTTGAGATGTCTAACATGGTATAGAGTTGTATCCTTAACTTAGCTTGGTCAGTAGAATCCTAAGTCGAACAAAGAAGTTGTGAGGTTTGAAGTTGTAGTAAGAGGTGACTCAAGTGTCGAACAAATAGTGTATTTTGTTTAGGGGCTTTAGAAAGAGTCGGATTGAAGGGAGATTGTTCAAGAGCTTTAGAGAAGGAGGTTTTAGTGGAGGCTCTATGATGTCCTTTGTTCAAGGGGAGTATTGTTGAGGATTATCGAGAGACGTAGTCTGGGTAGGGAGAGGTTGGGAGAGATTGGGAGGATTATCGAGAGGATTTAGTCTTGGGAGAGATTGGGAGGATTATCGAGAGGATTTAGTCTTGGGAGAGATTGGGAGGATTATCGAGAGGTTGGGAGAGATTTTGAGGATTATCGATAGGGAGAGGTTGGGAGGATTATCGAGAGACGTAGTCTCTAGCTTGGAGCAGTTGGGAGAGATTTTTACACCTTTATAAAGAATGTTGTGTCTGGCTAGGAAGAGGTTTTCACACCCTTATAAAGAATAATTCGTCCTTCTCTTCAACCGATGTGGGATCTCACAATCCACCCCCCTTCGAGGCCGAGCGACCTCATTGGCACTTGTTCCCTTCTCCAATCGATGTGAGAGCCTCCAATCCCACCCCTGTTCGGGTACCAACGTCCTTGCTGACACACCGTCTCGTGTCCACCCCCTTCAGGGTTCAACCTCCTGGTTGTGACATCGCCCAACGTTTGGCTCTGATACCATTTGGAACAGTTCAAACCCACCACTAGCAGATATTTTCTTTGGGTTTTCCCTCCCAATCTCACCTCGTGTCCATCCCCTTCGAGGCTCAGTCTTCTCGCTGTCACATCGCTCGATGTTTGGCTTTGATATCATTTCTAATGTAACGACCCGGGAAAGAAAGGAAAAAATATATATACATATAATAAAAATAAATAAATAAATAAATCAAATAAAGTAAAAAAAAAAAAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCGGGTCAACCCGAACCCAGAACCCGGGAGAGCCAGCCCGTTCCTCCCTTGGCCTCTGCCTTCGGCCCAGTCCAACTACAGNTTCGGCCCAGCCCAACTTCAGCGGCCCAAACCTCAAACCGGCCCAGAAGCTACGGTTCAGTTGAACCCACCCAGACCAGACCCACGGTCCAATTGAGCCGGCCTGCAAACCAAACTCCTGCGGCCCAGCCCAGTAAGCCGAGGCCCAACGATTAGTCTTGGCCCAGTAGCCTCCACAGCCCACGACCCGAACCACGACCCGAACCGGGCTGCGACCCGCGCTTCGACCCGACACTGCCGCCCGACGTGGCTTTCTCTGCTACGGCCACGTGTCACTCAACGGCGCAGGCAGTCCCTCGGCTCGGCTCGGCGCAAACGGCTCGGGCTCCCTCCGGCGACGCTCCGGCGGCTCCTCCGGCGGCTCCAGCGGCTGTTCGGCTCGGCTCACCTGTTTTCAGCCCGGTTTCCACTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGATGAGGGTGTTCATGAGGCGCATGACACTATGGGGTTCCGCTGACCTCCGGACGTCGCTACAGATTAGCTTGACCAGAGGGTCCAGGGGGTGTGCGAGCGCCCTGGGGACTCACACTCGCACGTGTGAGTCGTGTGTAGGGAAGTACTGCACATCCAATTTATCCGAGACTGGAGGCCACCCCTAAGATGATTAGAGATAGGTCCCTAAATCATGATTGCATGTGTTTGCATTTGCATGGCCCCCTATAGTGGGGCCACTTACTGAGTATTCTTTGAAATACTCAGGCCGTGTGCCACTTCATTTTTCAGGTAAAGACAAGGTGCACTTGTATGGAGGACGGTGGCATCGCGAGTAGAGACTGTGGCACGTGCATAGGGTAGACTCATATTTAAATTTCTAGTCTTAAGTTAGAATAGGTTGTTTTGCATTTAATTGTTTTAAATTATTTTGTATTTGTTTTTGTTTTCTCTAAATTTCAGTATTTCATATTTAAACACGTAAGACCATGGCTGTGTTTTCAGAGAAGAAGTTGTTTTAAACGTTTTTTTGAAATTTTCGTTATCAATTATGTTCATGTAAGAGTTATATTTTCCGCATTATAGATGAGCATGAGACGTTAGTAGCGACTCTGAGTATGTGGAAATTTAGGGTCGTTACATATTTTCTTTGGGTTTTCCCTCCCAATCTCACCTCGTGTCCATCCCCTTTGAGGCTCAGTCTTCTCGCTGTCACATCGCTCGATGTTTGGCTTTGATATCATTTCTAACCGTCCAAGTCCACCACTAGCCCTTTGGGTTTTCCCTTTCGGGCTTTCCCTAAAAGTTTTAAATGCTAGGAAGAGATTTTCACATCCTTATAATCTCGAACCGATGTGGGATCTCCTCCCCAACCGACGTGGGATCTCACAAACATTCAGACATATTTGAAACTTCATTAGAATTATAACGAAATCACGACCGAAAAACGAATTAAATCCACAGAAATTAATACGTCTATATATAGAAGAAACCGTAAAGAAATTGATAAATACGACTTGGAACAGTCCGTTTTATTTCGATGGAACTTTGAAATGTTCACATGCAAGTGTAAGCAGCTCAGGAGCATCATAACATTATTGGGCTATAATTCAGTAAGTAAGCTACACCTGATATGATAATCATACAGAATCAGAAGCCACAGTTTGTCAGTTAGAGTCCATACACATCTGGTTGTGCTTCAGCCTAATGAACTCCTCAGCCACATCGTCGATGTTTTCGGTACGGCAGCGTCTAGAAGCTTCATTCACATCGGATATCTCGTTGATGTCCTCACTGAACGTTACGTGAGATCTATGGCTTTTACGGTGTCTTCGAGTCACGAGCATAGAGTCGGAAACGTAACCTCCATAGTTATCTGAGGAATGAACACCATGATGAACATGGGAAGACTTGAGCTGAGAACTTCTAAAAGACATCTTTCGATCTGCGAGAGAACACCAAATATGTTGGTTTCTTGTTTGTGAATGAGTGATTGAAATGTGTCGAAGTGCATATATAGAACAATTGTATTCCTTATGGATGAGATTCGAATCCAATTCCTTCTCTTGGGAGAAGGGCCATTGAGGATTTTGATTTTAGGTGGAATACGAAAGAGATATCACTTAA

mRNA sequence

AAACCCTCAACGGATTAGCCTTCATTTTTTAGGATTTTTGAAGATGGGTCTCTCAAATTTCCCCCCGTCAGCTGAAGGAGTGTTGCTGTTACCAGTTCTAGTGATGAACACAGTCATGTCGATGGCTTTCTTGAAGAACTTGGTGAGATCTGTGCTACAAATGATGAGCGCCAACCCCTCGAGTTCTGCGGATGAATATGAACAGGAGAGTGGAAGAGTAAGAAGAATCTCCATTACCCATTTCAAATCCTTACGCCAAAGCTTCAATGGCGGAACAGAGACTGATAATTGCTCTGTTTCGAGGTGTTCTGTGGCAGAGTGCTCTGTTTGTCTGTGTGGATTTGAAGCTGACGAGGAAGTGGAATACGAAAGAGATATCACTTAA

Coding sequence (CDS)

ATGGGTCTCTCAAATTTCCCCCCGTCAGCTGAAGGAGTGTTGCTGTTACCAGTTCTAGTGATGAACACAGTCATGTCGATGGCTTTCTTGAAGAACTTGGTGAGATCTGTGCTACAAATGATGAGCGCCAACCCCTCGAGTTCTGCGGATGAATATGAACAGGAGAGTGGAAGAGTAAGAAGAATCTCCATTACCCATTTCAAATCCTTACGCCAAAGCTTCAATGGCGGAACAGAGACTGATAATTGCTCTGTTTCGAGGTGTTCTGTGGCAGAGTGCTCTGTTTGTCTGTGTGGATTTGAAGCTGACGAGGAAGTGGAATACGAAAGAGATATCACTTAA

Protein sequence

MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQMMSANPSSSADEYEQESGRVRRISITHFKSLRQSFNGGTETDNCSVSRCSVAECSVCLCGFEADEEVEYERDIT
Homology
[Close]
BLAST of CmoCh18G007660 vs. ExPASy Swiss-Prot
Match: Q9SI09 (Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 6.3e-04
Identity = 38/118 (32.20%), Postives = 60/118 (50.85%), Query Frame = 0 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQM--MSANPSSSADEYEQESGR 60
           MGLS+ P  +EG+L   V+++NT +S++ +K +VRS L +  +S +PSSS+      S  
Sbjct: 1   MGLSSLPGPSEGMLC--VILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSE 60

Query: 61  VRRIS------ITHFKSLRQSFNGGTET----DNCSVSRCSVAECSVCLCGFEADEEV 107
               S      +   +S  + F   T T      C   + +  ECSVCL  F+ D E+
Sbjct: 61  NSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEI 116

[Close]
BLAST of CmoCh18G007660 vs. ExPASy TrEMBL
Match: A0A6J1G151 (probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita moschata OX=3662 GN=LOC111449716 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.9e-50
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQMMSANPSSSADEYEQESGRVR 60
           MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQMMSANPSSSADEYEQESGRVR
Sbjct: 46  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQMMSANPSSSADEYEQESGRVR 105

Query: 61  RISITHFKSLRQSFNGGTETDNCSVSRCSVAECSVCLCGFEADEEV 107
           RISITHFKSLRQSFNGGTETDNCSVSRCSVAECSVCLCGFEADEEV
Sbjct: 106 RISITHFKSLRQSFNGGTETDNCSVSRCSVAECSVCLCGFEADEEV 151

[Close]
BLAST of CmoCh18G007660 vs. ExPASy TrEMBL
Match: A0A6J1HSQ5 (probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita maxima OX=3661 GN=LOC111466430 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.4e-48
Identity = 102/106 (96.23%), Postives = 105/106 (99.06%), Query Frame = 0 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQMMSANPSSSADEYEQESGRVR 60
           MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQMMSANPSSSADEYEQESG+ R
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQMMSANPSSSADEYEQESGKGR 60

Query: 61  RISITHFKSLRQSFNGGTETDNCSVSRCSVAECSVCLCGFEADEEV 107
           RISITHFKSLRQSFNGGTET+NCSVSRC+VAECSVCLCGFEADEEV
Sbjct: 61  RISITHFKSLRQSFNGGTETENCSVSRCAVAECSVCLCGFEADEEV 106

[Close]
BLAST of CmoCh18G007660 vs. ExPASy TrEMBL
Match: A0A6J1J1V9 (probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita maxima OX=3661 GN=LOC111482652 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.6e-34
Identity = 86/108 (79.63%), Postives = 93/108 (86.11%), Query Frame = 0 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQMMSA--NPSSSADEYEQESGR 60
           MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSV+QMMSA  NPSSS +E++ E+GR
Sbjct: 43  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGR 102

Query: 61  VRRISITHFKSLRQSFNGGTETDNCSVSRCSVAECSVCLCGFEADEEV 107
            RRISIT FKSL QSFN G  T+  S SRC +AEC VCLCGFEADEEV
Sbjct: 103 ERRISITQFKSLGQSFNNG-GTEKGSASRCIMAECCVCLCGFEADEEV 149

[Close]
BLAST of CmoCh18G007660 vs. ExPASy TrEMBL
Match: A0A6J1DFU2 (probable E3 ubiquitin-protein ligase XERICO OS=Momordica charantia OX=3673 GN=LOC111019714 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.6e-34
Identity = 85/110 (77.27%), Postives = 93/110 (84.55%), Query Frame = 0 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQMM----SANPSSSADEYEQES 60
           MGLSNFPP AEGVLLLPVL+MNTVMSMAFLK+LVRSV+QMM    SA+PSSS +EY+ E+
Sbjct: 1   MGLSNFPPPAEGVLLLPVLLMNTVMSMAFLKSLVRSVIQMMSASGSASPSSSEEEYDSEN 60

Query: 61  GRVRRISITHFKSLRQSFNGGTETDNCSVSRCSVAECSVCLCGFEADEEV 107
            R RRISIT FKSLRQSFNGGTE  + S SRC  AEC VCLCGFEADEEV
Sbjct: 61  ARERRISITQFKSLRQSFNGGTE--DGSASRCIAAECCVCLCGFEADEEV 108

[Close]
BLAST of CmoCh18G007660 vs. ExPASy TrEMBL
Match: A0A6J1GZI7 (probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita moschata OX=3662 GN=LOC111458569 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.6e-34
Identity = 86/108 (79.63%), Postives = 92/108 (85.19%), Query Frame = 0 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQMMSA--NPSSSADEYEQESGR 60
           MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSV+QMMSA  NPSSS +E + E+GR
Sbjct: 75  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGR 134

Query: 61  VRRISITHFKSLRQSFNGGTETDNCSVSRCSVAECSVCLCGFEADEEV 107
            RRISIT FKSL QSFN G  T+  S SRC +AEC VCLCGFEADEEV
Sbjct: 135 ERRISITQFKSLGQSFNNG-GTEKGSASRCVMAECCVCLCGFEADEEV 181

[Close]
BLAST of CmoCh18G007660 vs. TAIR 10
Match: AT1G67856.1 (RING/U-box superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 4.3e-16
Identity = 48/110 (43.64%), Postives = 75/110 (68.18%), Query Frame = 0 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQMMSANPSSSA----DEYEQES 60
           MG+S++P ++EGV  +P+LVMNTV+S++ +KN+VRSV+ M+S+  + +     D+  ++S
Sbjct: 1   MGISHYPTASEGV--MPMLVMNTVVSVSLVKNMVRSVVNMVSSETNEARNKEDDQDHEDS 60

Query: 61  GRVRRISITHFKSLRQSFNGGTETDNCSVSRCSVAECSVCLCGFEADEEV 107
            R RRISITHF+SL +  N G+  +          +C VCLCGF+ +EEV
Sbjct: 61  KRRRRISITHFESLCE--NRGSRNER------EAMDCCVCLCGFKEEEEV 100

[Close]
BLAST of CmoCh18G007660 vs. TAIR 10
Match: AT1G24580.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 6.0e-10
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 0 

Query: 21  MNTVMSMAFLKNLVRSVLQMMSANPSSS--ADEYEQESGRVRRISITHFKSLRQSFNGGT 80
           MNTV+S+  LKN+VRSV Q++++   SS   D+  ++    RRISIT FKSL ++     
Sbjct: 1   MNTVVSITLLKNMVRSVFQIVASETESSMEIDDEPEDDFVTRRISITQFKSLCENIEEEE 60

Query: 81  ETDNCSVSRCSVAECSVCLCGFEADEEV 107
           E            EC VCLCGF+ +EEV
Sbjct: 61  EEKG--------VECCVCLCGFKEEEEV 80

[Close]
BLAST of CmoCh18G007660 vs. TAIR 10
Match: AT2G04240.1 (RING/U-box superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 4.5e-05
Identity = 38/118 (32.20%), Postives = 60/118 (50.85%), Query Frame = 0 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQM--MSANPSSSADEYEQESGR 60
           MGLS+ P  +EG+L   V+++NT +S++ +K +VRS L +  +S +PSSS+      S  
Sbjct: 1   MGLSSLPGPSEGMLC--VILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSE 60

Query: 61  VRRIS------ITHFKSLRQSFNGGTET----DNCSVSRCSVAECSVCLCGFEADEEV 107
               S      +   +S  + F   T T      C   + +  ECSVCL  F+ D E+
Sbjct: 61  NSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEI 116

[Close]
BLAST of CmoCh18G007660 vs. TAIR 10
Match: AT2G04240.2 (RING/U-box superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 4.5e-05
Identity = 38/118 (32.20%), Postives = 60/118 (50.85%), Query Frame = 0 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQM--MSANPSSSADEYEQESGR 60
           MGLS+ P  +EG+L   V+++NT +S++ +K +VRS L +  +S +PSSS+      S  
Sbjct: 1   MGLSSLPGPSEGMLC--VILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSE 60

Query: 61  VRRIS------ITHFKSLRQSFNGGTET----DNCSVSRCSVAECSVCLCGFEADEEV 107
               S      +   +S  + F   T T      C   + +  ECSVCL  F+ D E+
Sbjct: 61  NSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEI 116

The following BLAST results are available for this feature:
BLAST of CmoCh18G007660 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SI096.3e-0432.20Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=X... [more]
BLAST of CmoCh18G007660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G1517.9e-50100.00probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1HSQ57.4e-4896.23probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1J1V91.6e-3479.63probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1DFU23.6e-3477.27probable E3 ubiquitin-protein ligase XERICO OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1GZI74.6e-3479.63probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita moschata OX=3662 GN=LOC... [more]
BLAST of CmoCh18G007660 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G67856.14.3e-1643.64RING/U-box superfamily protein [more]
AT1G24580.16.0e-1043.18RING/U-box superfamily protein [more]
AT2G04240.14.5e-0532.20RING/U-box superfamily protein [more]
AT2G04240.24.5e-0532.20RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47258:SF3F21J9.24-RELATEDcoord: 1..107
IPR044249Probable E3 ubiquitin-protein ligase XERICO-likePANTHERPTHR47258FAMILY NOT NAMEDcoord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G007660.1CmoCh18G007660.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008270 zinc ion binding