CmoCh18G006660 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCGGGTGCGGCTGCACCGTCCCTCCAACAGACCACGAGCGAGAGGCAGCTTTCCACTGCGAATTCCTATAAAACGCGTAGTTTTATGAAATACAACTCCCCATTTTCTCGCCGGCGATCCTTCTCTCTGCTGATTCACGGCTGTGCCGGAGGTGGACGCGGCGGCACAGCGGTGTTTTGTCGGTTTGGCCTTATCTTTTTACTCCTTCATGGCTAACTTCCACCGTCTCTTCCGAGTTCTGTTGCTGCTTTTCACTCTTTCTGGTTCGCTTTCTGGATCTTTTTGCTTGGCTGCTTAAGAACTTGTGTTAATGCTTTGGAACTTGTTTTTTTTTTTTTTCGTTTTCATTGCGTAATTAGGGAAAGAACATTGAATTTTTCGTTATTGGAGTTGTGAATATGTTATTGAATGTGATTCTGTGTTTGTTTCTTTAATTTAGTTAGTTGTAGACGACTGTGATTCTTTCTGGTTTCCTTTTTTTGTTCTTTCGGTTCTTCCTCTGGATTTTTGCCGATTAGTTCTAGGAAGTTCCATTTCGTAGCATATTCTCTGTCTTTTAGGACTTTCTCCTTCAGAGAATATTTGTGAAATTGAGATGATCTAATAGTTCTCAATTTTTCGATTAGGAATTTGAATTGATTTGAACTCGCTGAGATTCATTTCTCTTGTGGTACAATTTGGATTCTGAACACTCTGGCTCTGCTTTAATTCGGCGTGTGTTTCATTTCAGATTCAGTAATCCGAACTCTGAGCGTTGGAATTGGAATAAACTATGGCCAAATCGCTAATAATCTACCGTCTCCATCGCGCGTCGTCACTCTTCTCCAAAGTCTAAACATCAGCAGGGTAAAACTGTACGATGCAGATCCTAATGTCCTGTATGCCTTCTCCAGTAGTAATGTGAATTTCATTATAGGACTTGGTAATGAATATCTCCAGAACATGACCGATCCTCAGAAAGCCCTAGCTTGGGTTCAACAGCATGTTCAAACACACATCAGTCAGACTCAAATCACTTGCATCACTGTTGGCAATGAAGTTTTCGTTTCTAATGATTCTCAATTAAGGTCTAATCTTCTTCCTGCAATGCAATCTGTTCATAATGCTCTTGTTAATCTTGGGCTGGATAAGCAGGTTTCTGTCACCACGGCTCATTCCCTTAACATCTTAGCCAACTCTTTCCCTCCATCAGCAGGGTCATTCAGGCCAGATCTCACTGAATACTTACAACCAATACTCAATTTCCACTCAATGGCGAAATCTCCTTTCCTTATAAACGCATATCCTTTTTTTGCATACAAGGATAACCCTGGCCAAGTTCCCCTAGAGTATGTGCTTTTCCAGCCTAACCAAGGGATGACTGATCCCATCACAAATTTGCACTACGACAATATGCTGTATGCTCAAATCGATGCAGTTTATGCCGCCATCAAAGCATTGGGGCATACAGATATTCAAGTCCAGATTTCCGAAACCGGTTGGCCATCTCGGGGTGATCTGAACGAGGTTGGTGCTACACCAGAGAACGCTGGGTTGTATAATGGCAATTTGCTAAGAAGAATACAGAGTGGACAAGGAACCCCGGCAAAACCATCAATTCCTATCGATATCTATGTTTTTGCTCTATTCAATGAGAATTTGAAGCCTGGTCCAGCATCTGAGAGAAACTATGGCCTTTATTATCCTGATGGCACACCAGTTTACAACATTGGATTGCAGGGGTATCTCCCAGAGCTGTTGTATTCATCATCCAAAAGAAATGTAAGAGCCAGTCATTATGTTTCGAAGTTCCTATTGTTGTTTCTACATTCTTGTTCAAAAATCTAACTCGTAAATAATTGATTTTCAGGTTTTCTCAGTTTTCAGCTTGCTTCTGATATTCATAGCCAGCTTTATCTACAGTTAAGATCTTCACCATCAATTATGAAACAGTAGAGGTATACCAGAAATAGATAGAAATTCTTATTCATAGCCTGAAGAGTTTTATAGAGAAGCCGCGCATAAAGTCCCCTTCAGATGCTGCATTTAACTAACCATCTGTATTATATATTTACTTTCTATTTCATCATCAATTTGGTTCATTTGAAAATTATTTTTGTAGTTTCACACAGCAATAAAGTATTATTATTTCATTAAAAAGCTTCCTAAATATTGAGCTCCAAAAGAGCAGTTTCCTTTTTTTTCTTTTTCTTCTCTTTGCAGCTCCATTTCAGTGTTGGAGGACTACATAGATCCTAAACATGATACCAACTTGGTAACTTGATACCATGTGAGGAATAACGACTCTCCACAATGGTAAAAAGCTTTTTGGGGAAGCCCAGAACAAAGCTACGAGAGCTTATGCTCAAAGTGGACAATATCATATATCATTGTGGGGAGACGGAAGGACTAATCTTGGAGACGGACCATCTGAAATCAGTAAGGTCTCTCTTCTCTTTCCTCCAATGGGATATCATGATAAATAATGGGTGTCTGCATCAGTCATGTCTCTCTCTTATTTTACATGCGAATCGGGGTTAGGTTACTGAAATCTCTTGTTGAAGCAGCCATGTATGAACATCATTTCATTTAAACTAAACACATATCTGAGCAGCCCAATTTGAAACTGATAAAAGTAGCCATCCGGGGAAGGTTTTGGATGGTGGACTTTTCTTTTCCCCCCTTCCTCTTTGCTTTGTCTTTATTGGTTATTTGAGCATTAGTTTCTGGGTTGGAGTAATCTCACACGCCTTTTCATCTTTGATATCTCCTTGTTGGCGGGGCCTACTGATTTTACCAGTTTATTTGATGGTGTTGAATCCCATGAGGGTCAGCTTCCTTGGGATGGCCCCTCTGTTTTCCTTGCCGATAAGTTTGATTGTTTGTTTTGAATGGTTTCGATAAGGCGGTGACTGTCTTTTTCAAAGGATGGTGTGGGAACGGAGTTGCGTGGCTTCCAAATAAAGGAATTGGGTATATTTTTGTTGATATTTATTCATGAAATATCACCATTGTCGACTGAAAATATTTTAATTTCTTCACAGATGTTGCAACATGATTCGAGACTTCGAATCTCTCGGACGGTCGTGGCTAAAAAAATAAAGATAAAA TCCGGGTGCGGCTGCACCGTCCCTCCAACAGACCACGAGCGAGAGGCAGCTTTCCACTGCGAATTCCTATAAAACGCGTAGTTTTATGAAATACAACTCCCCATTTTCTCGCCGGCGATCCTTCTCTCTGCTGATTCACGGCTGTGCCGGAGGTGGACGCGGCGGCACAGCGGTGTTTTGTCGGTTTGGCCTTATCTTTTTACTCCTTCATGGCTAACTTCCACCGTCTCTTCCGAGTTCTGTTGCTGCTTTTCACTCTTTCTGATTCAGTAATCCGAACTCTGAGCGTTGGAATTGGAATAAACTATGGCCAAATCGCTAATAATCTACCGTCTCCATCGCGCGTCGTCACTCTTCTCCAAAGTCTAAACATCAGCAGGGTAAAACTGTACGATGCAGATCCTAATGTCCTGTATGCCTTCTCCAGTAGTAATGTGAATTTCATTATAGGACTTGGTAATGAATATCTCCAGAACATGACCGATCCTCAGAAAGCCCTAGCTTGGGTTCAACAGCATGTTCAAACACACATCAGTCAGACTCAAATCACTTGCATCACTGTTGGCAATGAAGTTTTCGTTTCTAATGATTCTCAATTAAGGTCTAATCTTCTTCCTGCAATGCAATCTGTTCATAATGCTCTTGTTAATCTTGGGCTGGATAAGCAGGTTTCTGTCACCACGGCTCATTCCCTTAACATCTTAGCCAACTCTTTCCCTCCATCAGCAGGGTCATTCAGGCCAGATCTCACTGAATACTTACAACCAATACTCAATTTCCACTCAATGGCGAAATCTCCTTTCCTTATAAACGCATATCCTTTTTTTGCATACAAGGATAACCCTGGCCAAGTTCCCCTAGAGTATGTGCTTTTCCAGCCTAACCAAGGGATGACTGATCCCATCACAAATTTGCACTACGACAATATGCTGTATGCTCAAATCGATGCAGTTTATGCCGCCATCAAAGCATTGGGGCATACAGATATTCAAGTCCAGATTTCCGAAACCGGTTGGCCATCTCGGGGTGATCTGAACGAGGTTGGTGCTACACCAGAGAACGCTGGGTTGTATAATGGCAATTTGCTAAGAAGAATACAGAGTGGACAAGGAACCCCGGCAAAACCATCAATTCCTATCGATATCTATGTTTTTGCTCTATTCAATGAGAATTTGAAGCCTGGTCCAGCATCTGAGAGAAACTATGGCCTTTATTATCCTGATGGCACACCAGTTTACAACATTGGATTGCAGGGGTATCTCCCAGAGCTGTTGTATTCATCATCCAAAAGAAATGTTTTCTCAGTTTTCAGCTTGCTTCTGATATTCATAGCCAGCTTTATCTACAGTTAAGATCTTCACCATCAATTATGAAACAGTAGAGGTATACCAGAAATAGATAGAAATTCTTATTCATAGCCTGAAGAGTTTTATAGAGAAGCCGCGCATAAAGTCCCCTTCAGATGCTGCATTTAACTAACCATCTGTATTATATATTTACTTTCTATTTCATCATCAATTTGGTTCATTTGAAAATTATTTTTGTAGTTTCACACAGCAATAAAGTATTATTATTTCATTAAAAAGCTTCCTAAATATTGAGCTCCAAAAGAGCAGTTTCCTTTTTTTTCTTTTTCTTCTCTTTGCAGCTCCATTTCAGTGTTGGAGGACTACATAGATCCTAAACATGATACCAACTTGGTAACTTGATACCATGTGAGGAATAACGACTCTCCACAATGGTAAAAAGCTTTTTGGGGAAGCCCAGAACAAAGCTACGAGAGCTTATGCTCAAAGTGGACAATATCATATATCATTGTGGGGAGACGGAAGGACTAATCTTGGAGACGGACCATCTGAAATCAGTAAGGTCTCTCTTCTCTTTCCTCCAATGGGATATCATGATAAATAATGGGTGTCTGCATCAGTCATGTCTCTCTCTTATTTTACATGCGAATCGGGGTTAGGTTACTGAAATCTCTTGTTGAAGCAGCCATGTATGAACATCATTTCATTTAAACTAAACACATATCTGAGCAGCCCAATTTGAAACTGATAAAAGTAGCCATCCGGGGAAGGTTTTGGATGGTGGACTTTTCTTTTCCCCCCTTCCTCTTTGCTTTGTCTTTATTGGTTATTTGAGCATTAGTTTCTGGGTTGGAGTAATCTCACACGCCTTTTCATCTTTGATATCTCCTTGTTGGCGGGGCCTACTGATTTTACCAGTTTATTTGATGGTGTTGAATCCCATGAGGGTCAGCTTCCTTGGGATGGCCCCTCTGTTTTCCTTGCCGATAAGTTTGATTGTTTGTTTTGAATGGTTTCGATAAGGCGGTGACTGTCTTTTTCAAAGGATGGTGTGGGAACGGAGTTGCGTGGCTTCCAAATAAAGGAATTGGGTATATTTTTGTTGATATTTATTCATGAAATATCACCATTGTCGACTGAAAATATTTTAATTTCTTCACAGATGTTGCAACATGATTCGAGACTTCGAATCTCTCGGACGGTCGTGGCTAAAAAAATAAAGATAAAA ATGGCTAACTTCCACCGTCTCTTCCGAGTTCTGTTGCTGCTTTTCACTCTTTCTGATTCAGTAATCCGAACTCTGAGCGTTGGAATTGGAATAAACTATGGCCAAATCGCTAATAATCTACCGTCTCCATCGCGCGTCGTCACTCTTCTCCAAAGTCTAAACATCAGCAGGGTAAAACTGTACGATGCAGATCCTAATGTCCTGTATGCCTTCTCCAGTAGTAATGTGAATTTCATTATAGGACTTGGTAATGAATATCTCCAGAACATGACCGATCCTCAGAAAGCCCTAGCTTGGGTTCAACAGCATGTTCAAACACACATCAGTCAGACTCAAATCACTTGCATCACTGTTGGCAATGAAGTTTTCGTTTCTAATGATTCTCAATTAAGGTCTAATCTTCTTCCTGCAATGCAATCTGTTCATAATGCTCTTGTTAATCTTGGGCTGGATAAGCAGGTTTCTGTCACCACGGCTCATTCCCTTAACATCTTAGCCAACTCTTTCCCTCCATCAGCAGGGTCATTCAGGCCAGATCTCACTGAATACTTACAACCAATACTCAATTTCCACTCAATGGCGAAATCTCCTTTCCTTATAAACGCATATCCTTTTTTTGCATACAAGGATAACCCTGGCCAAGTTCCCCTAGAGTATGTGCTTTTCCAGCCTAACCAAGGGATGACTGATCCCATCACAAATTTGCACTACGACAATATGCTGTATGCTCAAATCGATGCAGTTTATGCCGCCATCAAAGCATTGGGGCATACAGATATTCAAGTCCAGATTTCCGAAACCGGTTGGCCATCTCGGGGTGATCTGAACGAGGTTGGTGCTACACCAGAGAACGCTGGGTTGTATAATGGCAATTTGCTAAGAAGAATACAGAGTGGACAAGGAACCCCGGCAAAACCATCAATTCCTATCGATATCTATGTTTTTGCTCTATTCAATGAGAATTTGAAGCCTGGTCCAGCATCTGAGAGAAACTATGGCCTTTATTATCCTGATGGCACACCAGTTTACAACATTGGATTGCAGGGGTATCTCCCAGAGCTGTTGTATTCATCATCCAAAAGAAATGTTTTCTCAGTTTTCAGCTTGCTTCTGATATTCATAGCCAGCTTTATCTACAGTTAA MANFHRLFRVLLLLFTLSDSVIRTLSVGIGINYGQIANNLPSPSRVVTLLQSLNISRVKLYDADPNVLYAFSSSNVNFIIGLGNEYLQNMTDPQKALAWVQQHVQTHISQTQITCITVGNEVFVSNDSQLRSNLLPAMQSVHNALVNLGLDKQVSVTTAHSLNILANSFPPSAGSFRPDLTEYLQPILNFHSMAKSPFLINAYPFFAYKDNPGQVPLEYVLFQPNQGMTDPITNLHYDNMLYAQIDAVYAAIKALGHTDIQVQISETGWPSRGDLNEVGATPENAGLYNGNLLRRIQSGQGTPAKPSIPIDIYVFALFNENLKPGPASERNYGLYYPDGTPVYNIGLQGYLPELLYSSSKRNVFSVFSLLLIFIASFIYS Homology
BLAST of CmoCh18G006660 vs. ExPASy Swiss-Prot
Match: Q9ZQG9 (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana OX=3702 GN=At2g27500 PE=2 SV=2) HSP 1 Score: 528.1 bits (1359), Expect = 8.3e-149 Identity = 254/353 (71.95%), Postives = 309/353 (87.54%), Query Frame = 0
BLAST of CmoCh18G006660 vs. ExPASy Swiss-Prot
Match: Q8L868 (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana OX=3702 GN=At1g32860 PE=2 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 2.0e-123 Identity = 212/348 (60.92%), Postives = 268/348 (77.01%), Query Frame = 0
BLAST of CmoCh18G006660 vs. ExPASy Swiss-Prot
Match: Q9FHX5 (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana OX=3702 GN=At5g42100 PE=2 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 9.2e-108 Identity = 195/341 (57.18%), Postives = 247/341 (72.43%), Query Frame = 0
BLAST of CmoCh18G006660 vs. ExPASy Swiss-Prot
Match: Q9M069 (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2) HSP 1 Score: 306.2 bits (783), Expect = 5.1e-82 Identity = 150/320 (46.88%), Postives = 214/320 (66.88%), Query Frame = 0
BLAST of CmoCh18G006660 vs. ExPASy Swiss-Prot
Match: Q8VYE5 (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 2.6e-78 Identity = 152/344 (44.19%), Postives = 227/344 (65.99%), Query Frame = 0
BLAST of CmoCh18G006660 vs. ExPASy TrEMBL
Match: A0A6J1G0Y8 ((1->3)-beta-glucan endohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111449677 PE=3 SV=1) HSP 1 Score: 755.4 bits (1949), Expect = 1.2e-214 Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0
BLAST of CmoCh18G006660 vs. ExPASy TrEMBL
Match: A0A6J1HPS8 ((1->3)-beta-glucan endohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111466594 PE=3 SV=1) HSP 1 Score: 740.7 bits (1911), Expect = 3.0e-210 Identity = 373/380 (98.16%), Postives = 375/380 (98.68%), Query Frame = 0
BLAST of CmoCh18G006660 vs. ExPASy TrEMBL
Match: A0A1S3CEC3 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo OX=3656 GN=LOC103500010 PE=3 SV=1) HSP 1 Score: 704.1 bits (1816), Expect = 3.1e-199 Identity = 351/380 (92.37%), Postives = 365/380 (96.05%), Query Frame = 0
BLAST of CmoCh18G006660 vs. ExPASy TrEMBL
Match: A0A6J1I099 ((1->3)-beta-glucan endohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111469317 PE=3 SV=1) HSP 1 Score: 696.0 bits (1795), Expect = 8.5e-197 Identity = 342/375 (91.20%), Postives = 365/375 (97.33%), Query Frame = 0
BLAST of CmoCh18G006660 vs. ExPASy TrEMBL
Match: A0A6J1CMI6 ((1->3)-beta-glucan endohydrolase OS=Momordica charantia OX=3673 GN=LOC111012635 PE=3 SV=1) HSP 1 Score: 694.5 bits (1791), Expect = 2.5e-196 Identity = 344/380 (90.53%), Postives = 360/380 (94.74%), Query Frame = 0
BLAST of CmoCh18G006660 vs. TAIR 10
Match: AT2G27500.1 (Glycosyl hydrolase superfamily protein ) HSP 1 Score: 528.1 bits (1359), Expect = 5.9e-150 Identity = 254/353 (71.95%), Postives = 309/353 (87.54%), Query Frame = 0
BLAST of CmoCh18G006660 vs. TAIR 10
Match: AT2G27500.2 (Glycosyl hydrolase superfamily protein ) HSP 1 Score: 528.1 bits (1359), Expect = 5.9e-150 Identity = 254/353 (71.95%), Postives = 309/353 (87.54%), Query Frame = 0
BLAST of CmoCh18G006660 vs. TAIR 10
Match: AT1G32860.1 (Glycosyl hydrolase superfamily protein ) HSP 1 Score: 443.7 bits (1140), Expect = 1.5e-124 Identity = 212/348 (60.92%), Postives = 268/348 (77.01%), Query Frame = 0
BLAST of CmoCh18G006660 vs. TAIR 10
Match: AT2G27500.3 (Glycosyl hydrolase superfamily protein ) HSP 1 Score: 437.2 bits (1123), Expect = 1.4e-122 Identity = 202/281 (71.89%), Postives = 248/281 (88.26%), Query Frame = 0
BLAST of CmoCh18G006660 vs. TAIR 10
Match: AT5G42100.1 (beta-1,3-glucanase_putative ) HSP 1 Score: 391.7 bits (1005), Expect = 6.6e-109 Identity = 195/341 (57.18%), Postives = 247/341 (72.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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