CmoCh18G006650 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G006650
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Ferredoxin
Location	Cmo_Chr18: 8495562 .. 8495993 (+)
RNA-Seq Expression	CmoCh18G006650
Synteny	CmoCh18G006650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCAACACGTCGGCGCCGTGTAAAAACCAATTCAGAAGCACCATTATCAAGTGTCCATCTTCGATAGGATCCACGAGCAACATATCGAAATCGTTCGGCTTGAAATCATCACCCTCATCCAGAACCACTGCAATGGCAGTGTACAAGATTAAACTTATCGAACCGTGTGGGAAAGAGCACGAGTTTGAGGCATCTGATGATACTTACATTCTTGATGCAGCGGAAGAAGCAGGAATTGACCTTCCATATTCTTGCAGGGCAGGGGCGTGCTCTACATGCGCTGGGAAATTCGTTTCGGGTTCAGTCGATCAGTCGGACGGGTCGTTCCTGGACGATAGTCAAATGGAAGAGGGGTATTTGTTAACCTGTATTTCACACCCAACTTCAGACTGTGTGATTCTCACACACAAGGAAGGAGAACTGATCTGA

mRNA sequence

ATGTTCAACACGTCGGCGCCGTGTAAAAACCAATTCAGAAGCACCATTATCAAGTGTCCATCTTCGATAGGATCCACGAGCAACATATCGAAATCGTTCGGCTTGAAATCATCACCCTCATCCAGAACCACTGCAATGGCAGTGTACAAGATTAAACTTATCGAACCGTGTGGGAAAGAGCACGAGTTTGAGGCATCTGATGATACTTACATTCTTGATGCAGCGGAAGAAGCAGGAATTGACCTTCCATATTCTTGCAGGGCAGGGGCGTGCTCTACATGCGCTGGGAAATTCGTTTCGGGTTCAGTCGATCAGTCGGACGGGTCGTTCCTGGACGATAGTCAAATGGAAGAGGGGTATTTGTTAACCTGTATTTCACACCCAACTTCAGACTGTGTGATTCTCACACACAAGGAAGGAGAACTGATCTGA

Coding sequence (CDS)

ATGTTCAACACGTCGGCGCCGTGTAAAAACCAATTCAGAAGCACCATTATCAAGTGTCCATCTTCGATAGGATCCACGAGCAACATATCGAAATCGTTCGGCTTGAAATCATCACCCTCATCCAGAACCACTGCAATGGCAGTGTACAAGATTAAACTTATCGAACCGTGTGGGAAAGAGCACGAGTTTGAGGCATCTGATGATACTTACATTCTTGATGCAGCGGAAGAAGCAGGAATTGACCTTCCATATTCTTGCAGGGCAGGGGCGTGCTCTACATGCGCTGGGAAATTCGTTTCGGGTTCAGTCGATCAGTCGGACGGGTCGTTCCTGGACGATAGTCAAATGGAAGAGGGGTATTTGTTAACCTGTATTTCACACCCAACTTCAGACTGTGTGATTCTCACACACAAGGAAGGAGAACTGATCTGA

Protein sequence

MFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI

Homology

[Close]

BLAST of CmoCh18G006650 vs. ExPASy Swiss-Prot
Match: P27788 (Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.5e-45
Identity = 88/132 (66.67%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 11  QFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYKIKLIEPCGKEHEFEASDDTY 70
           Q   T +K PSS+   S ++K   LK+S     +AMAVYK+KL+ P G+EHEF+A DD Y
Sbjct: 20  QASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAY 79

Query: 71  ILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGYLLTCISHPTS 130
           ILDAAE AG++LPYSCRAGACSTCAGK  SGSVDQSDGSFLDD Q EEGY+LTC+S+P S
Sbjct: 80  ILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKS 139

Query: 131 DCVILTHKEGEL 143
           DCVI THKEG+L
Sbjct: 140 DCVIHTHKEGDL 151

[Close]

BLAST of CmoCh18G006650 vs. ExPASy Swiss-Prot
Match: Q9ZQG8 (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.0e-43
Identity = 90/143 (62.94%), Postives = 111/143 (77.62%), Query Frame = 0


Query: 4   TSAPCKNQFRSTIIKCPS---SIGSTSNISKSFGLK-SSPSSRTTAMAVYKIKLIEPCGK 63
           T A  ++Q  + +I   S   S+GST  +S+SFGLK S+ S   T  AVYK+KL+ P G+
Sbjct: 12  TKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAVYKVKLLGPDGQ 71

Query: 64  EHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEG 123
           E EFE  DD YILDAAEEAG+DLPYSCRAGACSTCAG+ VSG+VDQSDGSFL+DS +E+G
Sbjct: 72  EDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKG 131

Query: 124 YLLTCISHPTSDCVILTHKEGEL 143
           Y+LTC+++P SDCVI THKE EL
Sbjct: 132 YVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of CmoCh18G006650 vs. ExPASy Swiss-Prot
Match: O04090 (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 9.3e-37
Identity = 77/115 (66.96%), Postives = 90/115 (78.26%), Query Frame = 0


Query: 27  SNISKSFGLKSSPS--SRTTAMAVYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPY 86
           +N    FGLKSS +   R TAMA YK+K I P G E E E  +D Y+LDAAEEAG+DLPY
Sbjct: 31  ANTQSLFGLKSSTARGGRVTAMATYKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPY 90

Query: 87  SCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGYLLTCISHPTSDCVILTHKE 140
           SCRAG+CS+CAGK VSGS+DQSD SFLDD QM EGY+LTC+++PTSD VI THKE
Sbjct: 91  SCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKE 144

[Close]

BLAST of CmoCh18G006650 vs. ExPASy Swiss-Prot
Match: O04683 (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.5e-36
Identity = 78/125 (62.40%), Postives = 96/125 (76.80%), Query Frame = 0


Query: 20  PSSIGSTSNISKS-FGLKSSPS-SRTTAMAVYKIKLIEPCGKEHEFEASDDTYILDAAEE 79
           P +    +N+ ++ FGLKSS S  R TAMA YK+ L+ P GK+ E E  DD YILDAAEE
Sbjct: 23  PMTAALPTNVGRALFGLKSSASRGRVTAMAAYKVTLVTPEGKQ-ELECPDDVYILDAAEE 82

Query: 80  AGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGYLLTCISHPTSDCVILTH 139
           AGIDLPYSCRAG+CS+CAGK  SGSV+Q DGSFLDD Q++EG++LTC+++PT D  I TH
Sbjct: 83  AGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPTGDVTIETH 142

Query: 140 KEGEL 143
           KE EL
Sbjct: 143 KEEEL 146

[Close]

BLAST of CmoCh18G006650 vs. ExPASy Swiss-Prot
Match: P14937 (Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.0e-35
Identity = 68/96 (70.83%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 47  AVYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQS 106
           AVYK+KLI P G+E+EFE  DD +ILDAAEEAG+DLPYSCRAGACSTCAG+ V G VDQS
Sbjct: 2   AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQS 61

Query: 107 DGSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGEL 143
           +GSFL+D   E+G++LTC+++P SDCVI THKE EL
Sbjct: 62  EGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETEL 97

[Close]

BLAST of CmoCh18G006650 vs. ExPASy TrEMBL
Match: A0A6J1FZ83 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.0e-75
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYKIKLIEPCGKE 60
           MFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYKIKLIEPCGKE
Sbjct: 77  MFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYKIKLIEPCGKE 136

Query: 61  HEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGY 120
           HEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGY
Sbjct: 137 HEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGY 196

Query: 121 LLTCISHPTSDCVILTHKEGELI 144
           LLTCISHPTSDCVILTHKEGELI
Sbjct: 197 LLTCISHPTSDCVILTHKEGELI 219

[Close]

BLAST of CmoCh18G006650 vs. ExPASy TrEMBL
Match: A0A6J1FZ54 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.0e-75
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYKIKLIEPCGKE 60
           MFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYKIKLIEPCGKE
Sbjct: 14  MFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYKIKLIEPCGKE 73

Query: 61  HEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGY 120
           HEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGY
Sbjct: 74  HEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGY 133

Query: 121 LLTCISHPTSDCVILTHKEGELI 144
           LLTCISHPTSDCVILTHKEGELI
Sbjct: 134 LLTCISHPTSDCVILTHKEGELI 156

[Close]

BLAST of CmoCh18G006650 vs. ExPASy TrEMBL
Match: A0A6J1HTH8 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111466612 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.2e-72
Identity = 139/143 (97.20%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYKIKLIEPCGKE 60
           MFN SAPCKNQFRS+IIKCPSSIGSTSNISKSFGLKS  SSRTTAMAVYKIKLIEPCGKE
Sbjct: 14  MFNRSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSLHSSRTTAMAVYKIKLIEPCGKE 73

Query: 61  HEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGY 120
           HEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGY
Sbjct: 74  HEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGY 133

Query: 121 LLTCISHPTSDCVILTHKEGELI 144
           LLTCISHPTSDCVILTHKEGELI
Sbjct: 134 LLTCISHPTSDCVILTHKEGELI 156

[Close]

BLAST of CmoCh18G006650 vs. ExPASy TrEMBL
Match: A0A6J1CLH4 (Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.9e-64
Identity = 123/142 (86.62%), Postives = 133/142 (93.66%), Query Frame = 0


Query: 2   FNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYKIKLIEPCGKEH 61
           F  +APCKN++R TIIKCPSSIGS SNIS+SFGLKSSPS RT+AMAVYKIKL+EPCGKEH
Sbjct: 13  FTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVYKIKLVEPCGKEH 72

Query: 62  EFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGYL 121
           EFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSDGSFLDD+QM EGYL
Sbjct: 73  EFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGSFLDDTQMAEGYL 132

Query: 122 LTCISHPTSDCVILTHKEGELI 144
           LTC+S PT+DCVI THKEGELI
Sbjct: 133 LTCVSLPTADCVIHTHKEGELI 154

[Close]

BLAST of CmoCh18G006650 vs. ExPASy TrEMBL
Match: A0A0A0LY90 (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.0e-59
Identity = 119/143 (83.22%), Postives = 124/143 (86.71%), Query Frame = 0


Query: 1   MFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYKIKLIEPCGKE 60
           M+NT +  KNQ  STIIKCPSSIGST NI KSFGL S PS R  AMA +KIKL+EPCGKE
Sbjct: 14  MYNTQS--KNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKE 73

Query: 61  HEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGY 120
           HEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGK VSGSVDQSDGSFLDD QM  GY
Sbjct: 74  HEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGY 133

Query: 121 LLTCISHPTSDCVILTHKEGELI 144
           LLTCIS PT+DCVI THKEGELI
Sbjct: 134 LLTCISLPTADCVIHTHKEGELI 154

[Close]

BLAST of CmoCh18G006650 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 176.0 bits (445), Expect = 2.1e-44
Identity = 90/143 (62.94%), Postives = 111/143 (77.62%), Query Frame = 0


Query: 4   TSAPCKNQFRSTIIKCPS---SIGSTSNISKSFGLK-SSPSSRTTAMAVYKIKLIEPCGK 63
           T A  ++Q  + +I   S   S+GST  +S+SFGLK S+ S   T  AVYK+KL+ P G+
Sbjct: 12  TKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAVYKVKLLGPDGQ 71

Query: 64  EHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEG 123
           E EFE  DD YILDAAEEAG+DLPYSCRAGACSTCAG+ VSG+VDQSDGSFL+DS +E+G
Sbjct: 72  EDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKG 131

Query: 124 YLLTCISHPTSDCVILTHKEGEL 143
           Y+LTC+++P SDCVI THKE EL
Sbjct: 132 YVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of CmoCh18G006650 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 154.5 bits (389), Expect = 6.6e-38
Identity = 77/115 (66.96%), Postives = 90/115 (78.26%), Query Frame = 0


Query: 27  SNISKSFGLKSSPS--SRTTAMAVYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPY 86
           +N    FGLKSS +   R TAMA YK+K I P G E E E  +D Y+LDAAEEAG+DLPY
Sbjct: 31  ANTQSLFGLKSSTARGGRVTAMATYKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPY 90

Query: 87  SCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGYLLTCISHPTSDCVILTHKE 140
           SCRAG+CS+CAGK VSGS+DQSD SFLDD QM EGY+LTC+++PTSD VI THKE
Sbjct: 91  SCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKE 144

[Close]

BLAST of CmoCh18G006650 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-36
Identity = 76/120 (63.33%), Postives = 91/120 (75.83%), Query Frame = 0


Query: 26  TSNISKSFGLKSSPS--SRTTAMAVYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLP 85
           ++N    FGLKS  +   R TAMA YK+K I P G E E E  DD Y+LDAAEEAGIDLP
Sbjct: 30  SANTQSLFGLKSGTARGGRVTAMATYKVKFITPEG-ELEVECDDDVYVLDAAEEAGIDLP 89

Query: 86  YSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 144
           YSCRAG+CS+CAGK VSGSVDQSD SFLDD Q+ EG++LTC ++PTSD  I THKE +++
Sbjct: 90  YSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDIV 148

[Close]

BLAST of CmoCh18G006650 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 128.6 bits (322), Expect = 3.9e-30
Identity = 67/143 (46.85%), Postives = 93/143 (65.03%), Query Frame = 0


Query: 12  FRSTIIKCP---------SSIGSTSNISKSFGLKSSPSS--RTTAMAVYKIKLIEPCGKE 71
           + S IIK P         + + +  N +  FGL SS  +  +  A    K+KLI P G+E
Sbjct: 6   YSSYIIKIPVISRISPSQAQLTTRLNNTTYFGLSSSRGNFGKVFAKESRKVKLISPEGEE 65

Query: 72  HEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGY 131
            E E ++D  IL++AE AG++LPYSCR+G C TC GK VSG VDQS GSFL++ Q+++GY
Sbjct: 66  QEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGY 125

Query: 132 LLTCISHPTSDCVILTHKEGELI 144
           +LTCI+ P  DCV+ THK+ +LI
Sbjct: 126 ILTCIALPLEDCVVYTHKQSDLI 148

[Close]

BLAST of CmoCh18G006650 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-17
Identity = 52/125 (41.60%), Postives = 67/125 (53.60%), Query Frame = 0


Query: 30  SKSFGLKSSPSSRTT-----------AMAVYKIKLIEPCGKEHEFEASDDTYILDAAEEA 89
           S SF L+++  S TT               YK+ ++E  GK  E E   D  IL  A ++
Sbjct: 23  SFSFPLRNATLSTTTNRRNFLTTGRIIARAYKV-VVEHDGKTTELEVEPDETILSKALDS 82

Query: 90  GIDLPYSCRAGACSTCAGKFVSGSVDQSDGSFLDDSQMEEGYLLTCISHPTSDCVILTHK 144
           G+D+PY C  G C TC  K V+G+VDQS G  L D  +E GY L C S+PTSDC I    
Sbjct: 83  GLDVPYDCNLGVCMTCPAKLVTGTVDQS-GGMLSDDVVERGYTLLCASYPTSDCHIKMIP 142

The following BLAST results are available for this feature:

BLAST of CmoCh18G006650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27788	5.5e-45	66.67	Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1	[more]
Q9ZQG8	3.0e-43	62.94	Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1	[more]
O04090	9.3e-37	66.96	Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1	[more]
O04683	3.5e-36	62.40	Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1	[more]
P14937	1.0e-35	70.83	Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1	[more]

BLAST of CmoCh18G006650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZ83	4.0e-75	100.00	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1	[more]
A0A6J1FZ54	4.0e-75	100.00	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1	[more]
A0A6J1HTH8	3.2e-72	97.20	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111466612 PE=3 SV=1	[more]
A0A6J1CLH4	1.9e-64	86.62	Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1	[more]
A0A0A0LY90	9.0e-59	83.22	Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1	[more]

BLAST of CmoCh18G006650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27510.1	2.1e-44	62.94	ferredoxin 3	[more]
AT1G10960.1	6.6e-38	66.96	ferredoxin 1	[more]
AT1G60950.1	1.3e-36	63.33	2Fe-2S ferredoxin-like superfamily protein	[more]
AT5G10000.1	3.9e-30	46.85	ferredoxin 4	[more]
AT4G14890.1	1.0e-17	41.60	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 47..142 e-value: 2.9E-46 score: 153.2
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 54..129 e-value: 5.1E-21 score: 74.4
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 49..140 score: 12.647208
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 54..134 e-value: 3.47639E-32 score: 107.481
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 46..143 e-value: 1.3E-34 score: 119.9
None	No IPR available	PANTHER	PTHR43112:SF30	FERREDOXIN-3, CHLOROPLASTIC	coord: 5..142
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 5..142
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 86..94
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 42..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G006650.1	CmoCh18G006650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding