CmoCh18G006480 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G006480
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF803)
Location	Cmo_Chr18: 8142935 .. 8146525 (-)
RNA-Seq Expression	CmoCh18G006480
Synteny	CmoCh18G006480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACATTTGAGAAGCAAAGGGGGAAATTTGTTCTTCTTCTTCTCTCTCTCTCTCTCTCTCTCTCCTTTCTGCCATTTCGATCCAATCCAAGCAACGCCCCCAGCTGTATCCAGTTTCTCTTCACCCAGCGGGGCCTCTCTTTATAAGCGCCGACATACCCATCAACCCTTTGATCTTTCGCTCCATTCATCTTCAAATCTTCCCTTTCGATTTACACCCATTTCTATTTCCGTTACTGGGTACCGACGCCCTTGAATCAGCGCTCGATGAACTAGCCACTGCTTGCTTCATCGCTTCTTCCTCAGCCATGGCGGCCGAGCCTCCCAGTTGGCACGAAGGCATCTCCTCGGACAATACCAAAGGCTTCATTCTTGCTCTTTCTTCCAGCTTCTTCATCGGTGGGAGCTTCATTGTCAAGAAGAAGGGCTTGAAGAAAGCCGGTGCGTCGGGAATCAGAGCAGGTACGATTCTTCGGAAATTGTTTGATGTTCAATGTGTGTTTGGATTTTTTCGTTTTAGTTCGATTGATTTCTGTTTTCTGAATCGAAGCACGTTTTGATCCGATATGGTAATATGAGATTGATTTGATAATGTTTTTTATACTCTGGATTGGCGTCCTGCCATGCTTGATTTCTTTTAGTTTTGTTGTGATTTTGCTGATTGAATCCTTTCAGGAGCTGGCGGATTTACTTACTTATATGAGCCATTGTGGTGGTTGGGCATGATAACAAGTGAGTTTTAAGCGTTCTTGGCGATTGGTTATTGATGTTTATGATTTCAAATTGAAGAACAGTAATAATCAAATCTTCCATTTCATAAGTAACTGATCTGTTCTCTTAAACTGGTTGAAACATCGATTCTTGAAAGTTCTTTTGATTCTGTCTTCTTTGTTTATAAGATCGCCCACGGCTAGCATACATTGTCCATTTTGGCCCGTTACGTTTCACTATTAGCCTCACGATTTTAAAACGCATCTATTAGGGAGGGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTTCGTTCCCCATTCTTGCACTCTAGATGAATCTCTATGGACTTTACCTCGGCCATAGTTATAAATTTTTGCTATTTTTATGTATTAATCATAAACCAAATGAGTTCTTCATAGTTGGAAAGTGAATTTGGATATAGATCTGATGGATTTCTATCATTTCAACAGTGATTGTTGGAGAAATTGCTAACTTTGTGGCATACGCATTTGCACCAGCCTTATTAGTCACTCCTTTGGGAGCTCTCAGCATCATAATCAGGCATGGATCAAACATTGCTCAAACTTAAAGCTTAATTTTGTTGGTTTCAATCCTAATTTCGGATCTCGTCGTCCTACAGTGCTGTTCTTGCACATATCATTTTACAGGAGAAGCTACACATTTTTGGAGTTCTTGGTTGTATACTATGCGTGGTCGGTTCCACAACGATTGTTCTTCATGCTCCCCAAGAACGTGAGATCGAATCCGTGACCGAAGTTTGGCAAATGGCAATGGAGCCAGGTACAAAGCTGCCTGGATTCAGTTGTTTCGTTTCAGTATATCGTTTTCTTTTCGACTTAACCAACAATGAACTCTTTTCCATGGCAGCTTTTCTTTTGTATGCAACTCTGGTCATAACTTCTGCAGTTATACTCATATTCCACTTTATACCTCAATATGGTGAGACACACATAATGGTTTATATCGGAGTTTGTTCCCTATTAGGTTCGTTATCGGTACGTATGCTACGTTCTTCGTTAACTGCTCATTAGCTTTTGTTTCCTTTGCATCATTTCTTCATGGTTAGGGAAAAGAAAGTTGAATGGTTCATTACTATGCAGGTTATGGGTGTTAAAGCTCTTGGAATTGCCATGAAGTTGACATTATCTGGAGTGAACCAGCTAGTTTATCCACAAACTTGGATTTTTGCAATACTTGTAGCCACATTTTTGCTGACCCAGATGAATTATCTGAACAAGGTAGCCATGCTTTTTTCTTTCCAGTTTCTCTCGTTTTCTCGTGCTGCCATCTTTGAGTGATCCCTCCTATTCGTTCCCGTTGTCGATCCTGCAGAGTTTATATGTTGAAGAGAATCTTGCTGCTATATAATAAGAAATACAGTAGTTTGACTGATAATCCATAAATTTACTGCCACTTTTTCATGCATGGTTCATTTTTGTAACGGTCTGAGCCCACCGCTAGTAGATATTGTCCTTTTTGGGCTTCTCTTCAAGGATTTAAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCGTATAAAGAATGTTTCGTTCTCCTCCCTAACTGATGTGGGATCTCACAATCCACCCCTCTTCGGGGCTCAGCGTCCTTGCTGGCACTCGTTCCCTTCTCCAATTGATGTGGAACCCCCCAATCCACCCCCCTTCGCGGCCCAGCGTCCTTGTTGGCACACCGCCTCATGTCCACCACTCTTCGGGGTCCATCGTCCTCGTTGACACTCGTTCCCTTCTCCAATCGATGTGGGACCCCCCAATCCACTCTCATTCAGGGTCCCAACATCCTTGCTGGCACACAGCCTCGTGTCCACCCCCCTTCAGGGCCCAGCGTCTTCGTTAGCACTCGTTCCCTTCTCCGATCGATGTGGAACCCCTAAATCCACCTCCCTTCAAGGCCTAACGTCCTTGTTGGCACACCGCCTCGTATCCACCCTCCTTTGGAGCTCATCCTCCTCGCTGGCACATCGCCCCGTGTCTGGCTCTGAGACCATTTGTAACAACTCAAACCCACTGCTAGCAGATATTGTTCTCTTCCGGACTTCCCTTCAAGGTTTTTAAAATGCGTCTACTAGGGGGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCCCAACCGATATGAGATCTCACAAATTTCCACCTTGAAAAATGATGTGTACCTATTTCAATACGATAATTTAACACGAAATGGAGATGATCTATCATGATTCGTGCTGTACTTGTTTACCTTTTCTTCTCCTTCTCATTGCAGGCCCTTGATACTTTTAACACTGCTGTTGTATCTCCCATATACTACGTGATGTTCACATCACTGACCATTTTGGCAAGTGTTATCATGTTTAAGGTACATTCATAATATGTTTCGACATGTTTTTCGCAATTGATTGGTAATTAATACGCTTACTAGAACGTGTTTCTCAACAAGTATGCAACATATTTATGTCCTTTTAGACTCGTTCTATGCCTCTTCGGCGTCATTCATCGTAAGATGTCAATACCGACACAGCGATAACAATTGATCATTCACTTTCAGGATTGGGATAGGCAGAGCCCAGCACAAGTCATCACAGAATTATGTGGCTTTGTGACTATTCTTTCAGGAACCTTTCTTCTTCACAAAACAAAAGACATGGTTGATGGTAAGTAAGCGCATCGACCTTTTTCACATTGACTGATTTTACACAGCTTGTCTTACTCCGGTGTTCGGTTTCCAAATCCTACAGGTTTATCGACATCGTCGCCAATTCGACTTCCAAAGCACGTGGACGATGACAGATATAACGGCTTGGAAGGCATACCTCTAAGACGGCAAGAATCCATGAGGTTGCCATGA

mRNA sequence

TCACATTTGAGAAGCAAAGGGGGAAATTTGTTCTTCTTCTTCTCTCTCTCTCTCTCTCTCTCTCCTTTCTGCCATTTCGATCCAATCCAAGCAACGCCCCCAGCTGTATCCAGTTTCTCTTCACCCAGCGGGGCCTCTCTTTATAAGCGCCGACATACCCATCAACCCTTTGATCTTTCGCTCCATTCATCTTCAAATCTTCCCTTTCGATTTACACCCATTTCTATTTCCGTTACTGGGTACCGACGCCCTTGAATCAGCGCTCGATGAACTAGCCACTGCTTGCTTCATCGCTTCTTCCTCAGCCATGGCGGCCGAGCCTCCCAGTTGGCACGAAGGCATCTCCTCGGACAATACCAAAGGCTTCATTCTTGCTCTTTCTTCCAGCTTCTTCATCGGTGGGAGCTTCATTGTCAAGAAGAAGGGCTTGAAGAAAGCCGGTGCGTCGGGAATCAGAGCAGGTTCGTTATCGGTTATGGGTGTTAAAGCTCTTGGAATTGCCATGAAGTTGACATTATCTGGAGTGAACCAGCTAGCCCTTGATACTTTTAACACTGCTGTTGTATCTCCCATATACTACGTGATGTTCACATCACTGACCATTTTGGCAAGTGTTATCATGTTTAAGGATTGGGATAGGCAGAGCCCAGCACAAGTCATCACAGAATTATGTGGCTTTGTGACTATTCTTTCAGGAACCTTTCTTCTTCACAAAACAAAAGACATGGTTGATGGTAACTTGTCTTACTCCGGTGTTCGGTTTCCAAATCCTACAGGTTTATCGACATCGTCGCCAATTCGACTTCCAAAGCACGTGGACGATGACAGATATAACGGCTTGGAAGGCATACCTCTAAGACGGCAAGAATCCATGAGGTTGCCATGA

Coding sequence (CDS)

ATGGCGGCCGAGCCTCCCAGTTGGCACGAAGGCATCTCCTCGGACAATACCAAAGGCTTCATTCTTGCTCTTTCTTCCAGCTTCTTCATCGGTGGGAGCTTCATTGTCAAGAAGAAGGGCTTGAAGAAAGCCGGTGCGTCGGGAATCAGAGCAGGTTCGTTATCGGTTATGGGTGTTAAAGCTCTTGGAATTGCCATGAAGTTGACATTATCTGGAGTGAACCAGCTAGCCCTTGATACTTTTAACACTGCTGTTGTATCTCCCATATACTACGTGATGTTCACATCACTGACCATTTTGGCAAGTGTTATCATGTTTAAGGATTGGGATAGGCAGAGCCCAGCACAAGTCATCACAGAATTATGTGGCTTTGTGACTATTCTTTCAGGAACCTTTCTTCTTCACAAAACAAAAGACATGGTTGATGGTAACTTGTCTTACTCCGGTGTTCGGTTTCCAAATCCTACAGGTTTATCGACATCGTCGCCAATTCGACTTCCAAAGCACGTGGACGATGACAGATATAACGGCTTGGAAGGCATACCTCTAAGACGGCAAGAATCCATGAGGTTGCCATGA

Protein sequence

MAAEPPSWHEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRAGSLSVMGVKALGIAMKLTLSGVNQLALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQSPAQVITELCGFVTILSGTFLLHKTKDMVDGNLSYSGVRFPNPTGLSTSSPIRLPKHVDDDRYNGLEGIPLRRQESMRLP

Homology

[Close]

BLAST of CmoCh18G006480 vs. ExPASy Swiss-Prot
Match: Q94AH3 (Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana OX=3702 GN=At1g71900 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.9e-42
Identity = 131/362 (36.19%), Postives = 153/362 (42.27%), Query Frame = 0


Query: 1   MAAEPPSW---HEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRA------ 60
           MA    SW   ++G+SSDN KG +LALSSS FIG SFIVKKKGLKKA ++G RA      
Sbjct: 1   MAESSGSWRDSYKGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGGYS 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  YLYEPLWWIGMTTMLLGEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ILGCALCVVGSTTIVLHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQ 180

Query: 181 ----------------GSLSVMGVKALGIAMKLTLSGVNQL------------------- 193
                           GSLSVM VKALGIA+KLT SG NQL                   
Sbjct: 181 YGQTNVMVYIGICSLVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQ 240

[Close]

BLAST of CmoCh18G006480 vs. ExPASy Swiss-Prot
Match: Q9LNK7 (Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana OX=3702 GN=At1g34470 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.7e-41
Identity = 135/364 (37.09%), Postives = 152/364 (41.76%), Query Frame = 0


Query: 1   MAAEPPSW---HEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRA------ 60
           MA+   SW   ++G+SSDN KG +LALSSS FIG SFIVKKKGLK+AGASG+RA      
Sbjct: 1   MASLSGSWRDAYKGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYS 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  YLLEPLWWVGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 LLGCVLCVVGSITIVLHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQ 180

Query: 181 ----------------GSLSVMGVKALGIAMKLTLSGVNQL------------------- 193
                           GSLSVM VKALGIA+KLT SG+NQL                   
Sbjct: 181 YGQSHVMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVITQ 240

[Close]

BLAST of CmoCh18G006480 vs. ExPASy Swiss-Prot
Match: F4JKQ7 (Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana OX=3702 GN=At4g09640 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.1e-39
Identity = 134/358 (37.43%), Postives = 149/358 (41.62%), Query Frame = 0


Query: 7   SW---HEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRA------------ 66
           SW   ++G+SSDN KG +LALSSS FIG SFIVKKKGLKKAGASG+RA            
Sbjct: 7   SWRDAYKGMSSDNVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGGYSYLLEPL 66

Query: 67  ------------------------------------------------------------ 126
                                                                       
Sbjct: 67  WWIGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCAL 126

Query: 127 ------------------------------------------------------------ 186
                                                                       
Sbjct: 127 CIVGSVTIVLHAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHV 186

Query: 187 ----------GSLSVMGVKALGIAMKLTLSGVNQL------------------------- 193
                     GSLSVM VKALGIA+KLT SG NQL                         
Sbjct: 187 MVYIGVCSLIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNK 246

[Close]

BLAST of CmoCh18G006480 vs. ExPASy Swiss-Prot
Match: Q9LIR9 (Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana OX=3702 GN=At3g23870 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.2e-28
Identity = 69/127 (54.33%), Postives = 81/127 (63.78%), Query Frame = 0


Query: 52  GSLSVMGVKALGIAMKLTLSGVNQL-------------------------ALDTFNTAVV 111
           GSL+VM VKA+ IA+KLT SG NQ                          ALDTFNTAV+
Sbjct: 186 GSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINYLNKALDTFNTAVI 245

Query: 112 SPIYYVMFTSLTILASVIMFKDWDRQSPAQVITELCGFVTILSGTFLLHKTKDMVDGNLS 154
           SP+YYVMFT+ TI+AS+IMFKDW  QS  ++ TELCGFVTILSGTFLLHKTKDM +    
Sbjct: 246 SPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKTKDMGNSASG 305

HSP 2 Score: 62.0 bits (149), Expect = 8.5e-09
Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 12 ISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRAG 53
          +S DN  G ILA+SSS FIG SFI+KKKGLKKAGASG+RAG
Sbjct: 4  MSPDNINGVILAVSSSIFIGSSFIIKKKGLKKAGASGVRAG 44

[Close]

BLAST of CmoCh18G006480 vs. ExPASy Swiss-Prot
Match: B3LFA3 (Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana OX=3702 GN=At4g13800 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.2e-28
Identity = 69/114 (60.53%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 52  GSLSVMGVKALGIAMKLTLSGVNQL-------------------------ALDTFNTAVV 111
           GSL+VM VKA+ IA+KLT SG+NQ                          ALD FNTAV+
Sbjct: 186 GSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCILQINYLNKALDNFNTAVI 245

Query: 112 SPIYYVMFTSLTILASVIMFKDWDRQSPAQVITELCGFVTILSGTFLLHKTKDM 141
           SP+YYVMFT+ TILAS+IMFKDW  QS  Q+ TELCGFVTILSGTFLLHKTKDM
Sbjct: 246 SPVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFLLHKTKDM 299

HSP 2 Score: 59.7 bits (143), Expect = 4.2e-08
Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 10 EGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRAG 53
          E +S DN  G ILA+SSS FIG SFI+KKKGLKKAG SG RAG
Sbjct: 2  EEMSPDNIHGVILAVSSSIFIGSSFIIKKKGLKKAGVSGARAG 44

[Close]

BLAST of CmoCh18G006480 vs. ExPASy TrEMBL
Match: A0A6J1G075 (Probable magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111449524 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.2e-67
Identity = 178/359 (49.58%), Postives = 178/359 (49.58%), Query Frame = 0


Query: 1   MAAEPPSWHEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRA--------- 60
           MAAEPPSWHEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRA         
Sbjct: 1   MAAEPPSWHEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRAGAGGFTYLY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  EPLWWLGMITMIVGEIANFVAYAFAPALLVTPLGALSIIISAVLAHIILQEKLHIFGVLG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 CILCVVGSTTIVLHAPQEREIESVTEVWQMAMEPAFLLYATLVITSAVILIFHFIPQYGE 180

Query: 181 -------------GSLSVMGVKALGIAMKLTLSGVNQL---------------------- 193
                        GSLSVMGVKALGIAMKLTLSGVNQL                      
Sbjct: 181 THIMVYIGVCSLLGSLSVMGVKALGIAMKLTLSGVNQLVYPQTWIFAILVATFLLTQMNY 240

[Close]

BLAST of CmoCh18G006480 vs. ExPASy TrEMBL
Match: A0A6J1HQH0 (Probable magnesium transporter OS=Cucurbita maxima OX=3661 GN=LOC111466440 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.6e-63
Identity = 172/359 (47.91%), Postives = 175/359 (48.75%), Query Frame = 0


Query: 1   MAAEPPSWHEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRA--------- 60
           MAAEPP+WHE ISSDNTKG ILALSSSFFIGGSFIVKKKGLKKAGASGIRA         
Sbjct: 1   MAAEPPNWHESISSDNTKGLILALSSSFFIGGSFIVKKKGLKKAGASGIRAGAGGFTYLY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  EPLWWLGMITMIVGEIANFVAYAFAPALLVTPLGALSIIISAVLAHIILQEKLHIFGVLG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 CILCVVGSTTIVLHAPQEREIESVTEVWQMAMEPAFLLYATLVITSAVILIFHFIPQYGE 180

Query: 181 -------------GSLSVMGVKALGIAMKLTLSGVNQL---------------------- 193
                        GSLSVMGVKALGIAMKLTLSGVNQL                      
Sbjct: 181 THIMVYIGVCSLLGSLSVMGVKALGIAMKLTLSGVNQLVYPQTWIFAILVATFLLTQMNY 240

[Close]

BLAST of CmoCh18G006480 vs. ExPASy TrEMBL
Match: A0A6J1DG25 (Probable magnesium transporter OS=Momordica charantia OX=3673 GN=LOC111019765 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 5.8e-61
Identity = 167/359 (46.52%), Postives = 172/359 (47.91%), Query Frame = 0


Query: 1   MAAEPPSWHEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRA--------- 60
           MAAEPPSWH+G+S+DN KG ILALSSS FIGGSFIVKKKGLKKAGASGIRA         
Sbjct: 1   MAAEPPSWHDGMSTDNIKGLILALSSSVFIGGSFIVKKKGLKKAGASGIRAGAGGFTYLY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  EPLWWLGMITMIVGEIANFVAYAFAPALLVTPLGALSIIISAVLAHIILREKLHIFGVLG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 CILCVVGSTAIVLHAPREREIESVAEVWQMAMEPAFLLYATLVITLVIILIFHFIPQYGQ 180

Query: 181 -------------GSLSVMGVKALGIAMKLTLSGVNQL---------------------- 193
                        GSLSVMGVKALGIAMKLTLSGVNQL                      
Sbjct: 181 THIMVYIGVCSLLGSLSVMGVKALGIAMKLTLSGVNQLIYPQTWIFAIIVTTFLLTQMNY 240

[Close]

BLAST of CmoCh18G006480 vs. ExPASy TrEMBL
Match: A0A5D3CV74 (Probable magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002670 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.1e-59
Identity = 163/359 (45.40%), Postives = 171/359 (47.63%), Query Frame = 0


Query: 1   MAAEPPSWHEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRA--------- 60
           MAAEPPSW EG+SSDN KG +LALSSSFFIGGSFIVKKKGLKKAGASGIRA         
Sbjct: 1   MAAEPPSWQEGMSSDNVKGLVLALSSSFFIGGSFIVKKKGLKKAGASGIRAGAGGFTYLY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  EPLWWLGMITMIVGEIANFVAYAFAPALLVTPLGALSIIISAVLAHIILGEKLHIFGVLG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 CILCVVGSITIVLHAPQEREIESVTEVWQMAMEPAFLLYATLVITSAIILIFHFIPQYGQ 180

Query: 181 -------------GSLSVMGVKALGIAMKLTLSGVNQL---------------------- 193
                        GSLSVMGVKALGIAMKLTLSGVNQ                       
Sbjct: 181 THIMVYIGVCSLLGSLSVMGVKALGIAMKLTLSGVNQFVYPQTWLFAIIVTTFLLTQMNY 240

[Close]

BLAST of CmoCh18G006480 vs. ExPASy TrEMBL
Match: A0A1S3BET9 (Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103488849 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.1e-59
Identity = 163/359 (45.40%), Postives = 171/359 (47.63%), Query Frame = 0


Query: 1   MAAEPPSWHEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRA--------- 60
           MAAEPPSW EG+SSDN KG +LALSSSFFIGGSFIVKKKGLKKAGASGIRA         
Sbjct: 1   MAAEPPSWQEGMSSDNVKGLVLALSSSFFIGGSFIVKKKGLKKAGASGIRAGAGGFTYLY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  EPLWWLGMITMIVGEIANFVAYAFAPALLVTPLGALSIIISAVLAHIILGEKLHIFGVLG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 CILCVVGSITIVLHAPQEREIESVTEVWQMAMEPAFLLYATLVITSAIILIFHFIPQYGQ 180

Query: 181 -------------GSLSVMGVKALGIAMKLTLSGVNQL---------------------- 193
                        GSLSVMGVKALGIAMKLTLSGVNQ                       
Sbjct: 181 THIMVYIGVCSLLGSLSVMGVKALGIAMKLTLSGVNQFVYPQTWLFAIIVTTFLLTQMNY 240

[Close]

BLAST of CmoCh18G006480 vs. TAIR 10
Match: AT1G71900.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 171.4 bits (433), Expect = 7.0e-43
Identity = 131/362 (36.19%), Postives = 153/362 (42.27%), Query Frame = 0


Query: 1   MAAEPPSW---HEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRA------ 60
           MA    SW   ++G+SSDN KG +LALSSS FIG SFIVKKKGLKKA ++G RA      
Sbjct: 1   MAESSGSWRDSYKGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGGYS 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  YLYEPLWWIGMTTMLLGEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ILGCALCVVGSTTIVLHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQ 180

Query: 181 ----------------GSLSVMGVKALGIAMKLTLSGVNQL------------------- 193
                           GSLSVM VKALGIA+KLT SG NQL                   
Sbjct: 181 YGQTNVMVYIGICSLVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQ 240

[Close]

BLAST of CmoCh18G006480 vs. TAIR 10
Match: AT1G34470.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 170.6 bits (431), Expect = 1.2e-42
Identity = 135/364 (37.09%), Postives = 152/364 (41.76%), Query Frame = 0


Query: 1   MAAEPPSW---HEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRA------ 60
           MA+   SW   ++G+SSDN KG +LALSSS FIG SFIVKKKGLK+AGASG+RA      
Sbjct: 1   MASLSGSWRDAYKGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYS 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  YLLEPLWWVGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 LLGCVLCVVGSITIVLHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQ 180

Query: 181 ----------------GSLSVMGVKALGIAMKLTLSGVNQL------------------- 193
                           GSLSVM VKALGIA+KLT SG+NQL                   
Sbjct: 181 YGQSHVMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVITQ 240

[Close]

BLAST of CmoCh18G006480 vs. TAIR 10
Match: AT4G09640.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-40
Identity = 134/358 (37.43%), Postives = 149/358 (41.62%), Query Frame = 0


Query: 7   SW---HEGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRA------------ 66
           SW   ++G+SSDN KG +LALSSS FIG SFIVKKKGLKKAGASG+RA            
Sbjct: 7   SWRDAYKGMSSDNVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGGYSYLLEPL 66

Query: 67  ------------------------------------------------------------ 126
                                                                       
Sbjct: 67  WWIGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCAL 126

Query: 127 ------------------------------------------------------------ 186
                                                                       
Sbjct: 127 CIVGSVTIVLHAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHV 186

Query: 187 ----------GSLSVMGVKALGIAMKLTLSGVNQL------------------------- 193
                     GSLSVM VKALGIA+KLT SG NQL                         
Sbjct: 187 MVYIGVCSLIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNK 246

[Close]

BLAST of CmoCh18G006480 vs. TAIR 10
Match: AT3G23870.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 125.6 bits (314), Expect = 4.4e-29
Identity = 69/127 (54.33%), Postives = 81/127 (63.78%), Query Frame = 0


Query: 52  GSLSVMGVKALGIAMKLTLSGVNQL-------------------------ALDTFNTAVV 111
           GSL+VM VKA+ IA+KLT SG NQ                          ALDTFNTAV+
Sbjct: 186 GSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINYLNKALDTFNTAVI 245

Query: 112 SPIYYVMFTSLTILASVIMFKDWDRQSPAQVITELCGFVTILSGTFLLHKTKDMVDGNLS 154
           SP+YYVMFT+ TI+AS+IMFKDW  QS  ++ TELCGFVTILSGTFLLHKTKDM +    
Sbjct: 246 SPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKTKDMGNSASG 305

HSP 2 Score: 62.0 bits (149), Expect = 6.0e-10
Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 12 ISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRAG 53
          +S DN  G ILA+SSS FIG SFI+KKKGLKKAGASG+RAG
Sbjct: 4  MSPDNINGVILAVSSSIFIGSSFIIKKKGLKKAGASGVRAG 44

[Close]

BLAST of CmoCh18G006480 vs. TAIR 10
Match: AT4G13800.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 125.6 bits (314), Expect = 4.4e-29
Identity = 69/114 (60.53%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 52  GSLSVMGVKALGIAMKLTLSGVNQL-------------------------ALDTFNTAVV 111
           GSL+VM VKA+ IA+KLT SG+NQ                          ALD FNTAV+
Sbjct: 186 GSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCILQINYLNKALDNFNTAVI 245

Query: 112 SPIYYVMFTSLTILASVIMFKDWDRQSPAQVITELCGFVTILSGTFLLHKTKDM 141
           SP+YYVMFT+ TILAS+IMFKDW  QS  Q+ TELCGFVTILSGTFLLHKTKDM
Sbjct: 246 SPVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFLLHKTKDM 299

HSP 2 Score: 59.7 bits (143), Expect = 3.0e-09
Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 10 EGISSDNTKGFILALSSSFFIGGSFIVKKKGLKKAGASGIRAG 53
          E +S DN  G ILA+SSS FIG SFI+KKKGLKKAG SG RAG
Sbjct: 2  EEMSPDNIHGVILAVSSSIFIGSSFIIKKKGLKKAGVSGARAG 44

The following BLAST results are available for this feature:

BLAST of CmoCh18G006480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AH3	9.9e-42	36.19	Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana OX=3702 GN=At1g7190...	[more]
Q9LNK7	1.7e-41	37.09	Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana OX=3702 GN=At1g3447...	[more]
F4JKQ7	2.1e-39	37.43	Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana OX=3702 GN=At4g0964...	[more]
Q9LIR9	6.2e-28	54.33	Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana OX=3702 GN=At3g2387...	[more]
B3LFA3	6.2e-28	60.53	Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana OX=3702 GN=At4g1380...	[more]

BLAST of CmoCh18G006480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G075	3.2e-67	49.58	Probable magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111449524 PE=...	[more]
A0A6J1HQH0	1.6e-63	47.91	Probable magnesium transporter OS=Cucurbita maxima OX=3661 GN=LOC111466440 PE=3 ...	[more]
A0A6J1DG25	5.8e-61	46.52	Probable magnesium transporter OS=Momordica charantia OX=3673 GN=LOC111019765 PE...	[more]
A0A5D3CV74	1.1e-59	45.40	Probable magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BET9	1.1e-59	45.40	Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103488849 PE=3 SV=1	[more]

BLAST of CmoCh18G006480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71900.1	7.0e-43	36.19	Protein of unknown function (DUF803)	[more]
AT1G34470.1	1.2e-42	37.09	Protein of unknown function (DUF803)	[more]
AT4G09640.1	1.5e-40	37.43	Protein of unknown function (DUF803)	[more]
AT3G23870.1	4.4e-29	54.33	Protein of unknown function (DUF803)	[more]
AT4G13800.1	4.4e-29	60.53	Protein of unknown function (DUF803)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008521	Magnesium transporter NIPA	PFAM	PF05653	Mg_trans_NIPA	coord: 15..52 e-value: 3.3E-8 score: 33.1 coord: 77..140 e-value: 1.3E-25 score: 90.1
IPR008521	Magnesium transporter NIPA	PANTHER	PTHR12570	UNCHARACTERIZED	coord: 10..52 coord: 77..190
IPR008521	Magnesium transporter NIPA	PANTHER	PTHR12570	UNCHARACTERIZED	coord: 52..77
None	No IPR available	PANTHER	PTHR12570:SF54	MAGNESIUM TRANSPORTER-RELATED	coord: 77..190 coord: 52..77
None	No IPR available	PANTHER	PTHR12570:SF54	MAGNESIUM TRANSPORTER-RELATED	coord: 10..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G006480.1	CmoCh18G006480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015693	magnesium ion transport
cellular_component	GO:0005768	endosome
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015095	magnesium ion transmembrane transporter activity