CmoCh18G005130 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G005130
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Peroxin-1
Location	Cmo_Chr18: 3699262 .. 3706346 (+)
RNA-Seq Expression	CmoCh18G005130
Synteny	CmoCh18G005130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAATTTCACGGCAACTTTCTGCTCCGACGACTACATGACGACGAGCGACAACTGAGCCGACTTCAACTCCAACTCGCAAAGCCGTCACTGCCGGAGAAAGTTGGGATCGGAGAGCGCCTGGAACTCTCTCTCTTTTTGACGGTGTGAAGACCGGCGTCATAGCCATCGTCGGAGCACTCAATTTTCATTTTCATTACACGCGGCGGCCGACTTAATTCGGTATTGGAATTGCATTGCGCAATCTAATTCAGTCGCTTCTGCTGCGGGCTTCCGTTTGTGGAAATTCAATTCTTAGAGTGCTATGGAATTGGAGGTGAGGACTGTGGGAGGGATGGAGAACTGTTTTGTGTCACTTCCTCTCGTTTTCATCCAAACTCTCGAGAGGCGGTCTGGTTCTGGCTCGGCCATGGGCGGTCTCCCTGAATTCCTCGTTCTTGAACTTCGCGATTCCTCTTCCGATGAGGTTTGGACGGTTGCTTGGTCTGGCGCTTCGTCATCTTCTGCTGCAATTGAGGTACCTCTACTCTCACGTGAATGCTATTTCTTAATCAACTAGCACATCCAGAGCTGAATTCTTCAAATACGAGCGTTTATGAAGACTGTTTTAGAATATATCGTTGACAAGTTTAAGGTTGTGCTTAAAAACTGATAGAATTCAATGGATTTTCTGTTGGTCGTCTTTCTTTTACCTTGCTTTTAAGCCGGGGTTCCTTTGGTATCAGTAGTTTCCGGTAAGCAGAGCTGCTGGTGTTTAAAAAATCGTGTATGGAATGCAAATGCATAAGATAGTGATCATTAAAAGTTTTATCTTCCATTGATGTATAATTTGTTTATAGATATAGATGAGGATGGGATAGGGACTCTGGTTGAATGGTGGAATTTCTACGTTAGAAGTATAGAAAAATCGACACAGCAACGTGTAGGAGGATTATTCTGTGTCTGCAACGTATAGTTTATGAGCTATGCATGGTGGACTGTTCGTTGGAATGTCCTTGCATTGCATCATTGATTGATTATGTTTCTAGTTGTAGCTTTGCTTCTTTGTCGACTGTTATTAACCAACTATATGGTAAGTTTTAATGATTCATATGTCATATGATGTCTGTTTTATAAATTTGATACGGTTAATTCCATCATATTTTGCTGTGAAAATTGTAGCTATATCCTGTCGGCATTTAAGGAAAATAATATCATAAACTTTTATATTCCTCATTTTCTCTTCATATTTTTTGATTCTTCTGCCGTTAAGCATAAGCAGCATGTGGTTTCTTTGGACGTATTTAAAATTTTTCCTGAATTTTGTCATATTAAATTCTTATTCACTCAACATGTTGTTTTAAATTTAATGTAGGTCTCCAAGCAATTTGCAGATTGTATTTCCTTACCAGACTGTACCAGTGTTCAAGTTCGAGCTATTTCTAATGTGCCAAAGGCTACTGTAGTTACAATAGAGCCTTATGGTGAGGATGACTGGGAAGTTCTAGAGTTAAATGCAGAGCTTGCTGAGGCAGCCATATTGAACCAGGTTCCTCATATACATCCCTATCTTCTATAATTCCCTTTCTTATCGCACATCTAGGATGGATGTAAAACTTATTTGATTTTGGGATGTTTTTAATCCATTTCTTATGTTTGTCACGCTGGACAAAATTGTGGCATGCAACGGATAATAAGTTTTGTCTGTACCTACAATTTGTAGACTTACTGAAAAGTTTTGTTTCTGGTTAAGAAAAAGATATTATTTTGCTTCTACCAAAGGTTTCTGTTGTTATATTATTTTTGGGTTCAGCCTAGTGTTAAATCTAATTATTACACAAATTCTATCAAATAACAATTACTTCTTTGCTATGTTTTCCTTCTCGTCTCCCCTGTCCTTTGCTTCATCTGTGTTAGTGTCTCCGTTATCCTTGGTCTTTCCCTTCGTCATCATTTGAATATTTGTTTATATAAAGATGGCTGGTTGGGGTGTGACAATCAGTCTTGCAGTGTTCATTGAGAACTCAAATTTTAAGCTTTAAGTTGATAGCGAGTACAGAGGAGGCATAGTGGACTGTGATTTCGGCAGTAATATCTCATGCTCCTTTTCGTTATATTGGTAAGCTTTTTCCTGGATCTCTGGTTTTGTGAAGCATCTTTTGAAGTGTTTGGTGTTTCTTTTCTCCCACTCCTCCCTTTCTTTCTTTCTTTTTAGAGATTCAAGTCATGATATGCAACGACCCGTTTTTCGATGCCTCAAATCATGGATTGCCATGTGGACTCAAGAGTAAAATGAGCAGAAAATTTTTCAATTTGTAGAGTGGGAGATGCAAGGAATTTAAAATTCAAACATGCATTTAAAACGGACTCAAAATCAATTTGAAAGTACAAAACAATATCTACGGAGTCACATAAAAACAATGTACAAAATGGTATGAGTTTGCAAAGTAACATTAAAGTAATCTTAAAAGCGACATAAAAGGGGAAAGACTTGATCTATGGATCCCTCTTGCAGCCGCATGCTCCTGCTATCAACCGTAATCTACGCTTCATCTGAAAAAAAAAAGAAAAAAAAAAAGAATACAGGAATTAGTATAAAAATATTCAGTAAGCAACCTACTTGTAGGCTTTTATTGGACTTAATCCTTATGACAGTATCTTAAGCTATGTGCTCATATACTAATCTTAACGTTAGACAATACCGTGACATGTAGTCTGTGCAAACTCTATAAGGTTTATACGTACCTAGACCCTATACACTCCTACTCCAGGGGTGTATACCTAACCCCCTCGGAGCCATAATGTAGGGTTTTCGGTTATGCTTAGCTCTACATTTTTCGTTTTCCATGACCAGACAAGTACTCTGATCGCTTGTCCCCTATACATATTTGTCCACTGGATGCTCCCTAATAGTATACCCTATATACGACTCTTGGGACCCTATGTGGGTAACCACTAAACTCTTTATACCAAGTAGACCCTTACCACTCTAGGAAAGTTCACGATTAGGGGTTACTTGCCAATTGTACCTACTTGATACTTAGTCAACCCAAAATGCATGTGAGGTCCATATGTAGATTCAAACATAAAACAGTGGCTCATGTTCATTCATGTGTCTTCCCAGACTTTCTAGGCACATAGCAAATATCCAAAGTAGAAACTTGGCGTACATGGGTGTTTAACCCCTATAACATGCTCCCACAAGTATATCATACATATATATATATATATATATATATATATAAATGTTCAACATGCTCAAATAGACATTTAATAATCATACGAGACATGCTAGAATCCTAAAATATCTCTAGGACTAGTTAAGAGTTTTTAAACATACAAGTGGAAGCTATAAAAACATATTATCATGCTAAACCAGACAACCACTGAGTTACTAGGCTTAACTATCATGTATCTCAATCATTTAGACCTATAATCATGTTTTCTAACAGGTAGCCCAATGTCCTAATTGATCCCTACAAGTATTATTTGAAAAATAATCTATGTGGCCACTTACTTGTTTGTCGACTTCCCGAGCTTGGTTTCGGTCTTCTAGCATTTCAAATTCTCTTAATTTCTCAAGTATGTCCTAAATTATGTCAAAAGAATAAAAAGGACTCCAAGAAGCTTCAAATTTGTTAAAAAAGAGGGATATAGGTCGAGAAACTAACCGTTGACTGATGGTCATCTTCCCCAACTGTGTGCATGCTATTTTGCTTTCCTTCTTTCTTTCTTTCTTCTTCTTCTTCTGTTTTTTTTCTTTTAATAAAAAAGATTCTTTTTTTATTTCTTAGAACTCCAGATGTTACTTCCTTTGGGTTGAAAAAACCTAGAATAAAAATTGAACAGTAGCTGAAATCAAGTTTTTGTAGTCCCTTATCTTGGTGTGTCTTATTACTCATGACAAAAGTTCAGGTAAGGACACCCTTGTCCTTCATCTTCTAGCTAGTCTTTTTTTTGTGCTAAAAGGAGAGAAGCTCTTTTGATGTCCTCATTGTATGAAAATTTGGGACGAGGCGTCTTGAGTTTTGTGGTTAATATCCTCTTGAGTATCATTTTCATTGACAAAACATGGAAGTCCTTTTGTGGTTAATCATTGACAAAACATGGAAAAGTGTTAGCTTATAGTCTTTTTTTCTGCCCTAAATGAAAAAGAGAAACACAGACCATGGACATGGAACTTGCATACAACAAAATGGACATGTCCGTCTATCAGTTTCTATCAGGTTAGTATATTTTGGGATCCTATAGTAGATTATAAATAAGCTTCATAAAAGGACTACTTATCTCACTATTATTATTAAAGCTATTCTCTCAAACCTTCCCGTCTACTAGTGGTCTTGTTTCCTACGCCTGATAAAATTCTTGACTTGATTGGGTAGCTTTTAAGGGATTTTCTTTGAGAAGGAGCAAACTATTTGGGTTGTCATCTTGCAAACTGGAGGAAGGTCCATTGATTGGTTTAGGGACTTCAGCATCGGTAGCCTTAAACAGAGAATCAAACTCTTTTTGGAAAGTGGATTTAGATATTTCTTTGTGGAAGAGAATCCCCTTTGGTGGCTGATCATTATTGCTAAATACGGCTCCATCGACTTAAGCTCTTGGCATGATGACTTTTATGTGCACTAATGCAGATGCCATGGAAGTTTATTATCAAATGTGAGCAGCATATTCTTTCCAGAAAAAAGCAATTTGTGGGCAAATGGTTTGTGCACCAACTTTTGGTTAGATCTACAGGATGTCCCCTAGGTTTTTCTTCCTCTCTAACTGGAAGCATGCATCCATCAAGAGTTTTGGAACTCATCCACTCAAACATGGAATTTGATTATAGGGGGCTTTCACGGATAATAAATTCAAGAGTGCGTGGCTTTAATTGACTTGCTCTCTGTGGTCTATTTCACAAATTGCCCTTACAAATAGAAATAGTAGCTTCTTGATGTATTGGGAACCTTGACTGTTTGGTCCTTCTCCACAGTCATGATAAACCTAGATGCTTCATCATGCCCCCCATTCTACCGAGAAATTTGCCTTGGTAGTTACCTCAAAAAGGAAAACTTATTATTGTGGGAAATGGTCACGAGAGCATGGATACCCAGGATTTATTTGATACAAAACAGGTACCCTTCCCTCCATTTCTCTATCCTTGGGTTGGGTGTATCATGTGCAAAAAGGGACCGAATCTCAGACTCACACTTTTCTTAGTTCATTTGCATACAGATTATGGAGTTGCTCACCCTCCTCCTTTAATTGACTTGAGGCTCTCCTTTTCTGCATGAGTCATCATGATTCTGTCATGGCTATTCATCTTTTCACTAAGTAATAGAAGATTCTTTGACTTCAATTTATTAGAGCTTATTTTCGGAATTGGTGGCTTGAAGGAGCAACTAAAGTCTCAGTAGCTTACAGAAAACTTTTACCCATTTTTAGATAATATTTATTTTGTGATCCTCCCTTGTTGTAAATTATGCGTTCTTATTAAACAGTTTAAACATGAAAGAGATTTTTGCAACCTTTTTAACTTGAGATTTCTTTCTATTGTAATTTGTATCAACTATGAAATTGTTCGGTTCTTATCCAAAAATGTATAGACTTCTCATCTAGATATTCCACAAGATATAGCTACTTTCTTTTACCTCGCGGGTTCTAACCTATGTGCATGCAACCGACTAATCTCATAGGACAATTGCTTGATCCTACATCACTCTATTCCGAGAAAGATCATAGAATATTAGATCCTAAGTAAGTGAAAGAAAACAAATAAGTATGAAGGAAATAAAAAATAAAAGTTCGCCAATGTAAAATAATAACAAATAACAAGAACTTAGCAACCGACTTGGAGAGAGAACACCATGAAGAAGACTTTAGCGCAGATTCAAAATAAACAAGTCCTGGAATAAACTTTGTGTTAAACAATCGTATTGATTCCTTCCCATTCACAAAATTTTCCTCCATCCATTAAAAGTCTTCTAGAAACAGTAATCCAAGAGCTGAGATGAATCCCAGAAATCAAAACTAACTTGCACAAATCATAGAGCTCAAATTACTGCCAGATTCTGGTAAAACACAACCAAGGGCTTCTTGAACTAGAACTATGATTTCTGGCCGTTTGCCAATCAAAAGATGGATATTGAAGGTAACAAGTTCCCTGACCTTAGCATCTAATGAGCAAATTATTTGAAATCTTGATGATGTTTAATAAATATGGAGATTATTTGGCTGCATATCGGTAAGTAGGTACCTTCCTACACACCACCATTAAATGTTTGACCCTAAGAGAGAGAAAAGTGAAAAATGAGAAATTGAATTTTTTTTTACTTTCCTGTAGTTGTACAAAACAAAAGTAAATGATTGCATGTAGGAAGATACCTACACATTGGTATGCAGCGAAGTATTGTTCATAAATTATTTAGGAGACATACAAAAGATTACAATAACCAGATATCATATATGAGTTGCCTATTAATGATGAAAACAATTCAAGAAAATTGTATGTGATGCAGGTCAGAATCATTCATGAAGCAATGCGATTTCCTTTGTGGTTACATGGTCGGACGGTTGTTACATTCCTTGTGGTTTCTACCTCTCCTAAGCGTGCGGTGGGTAAGAGGATATCTAATGCTTAGTTTACTTGTCATTTGTTTGCTTTGCTAATATATTGATTGGCTGCTATGAAAGCATACAAGATTCTTTTATTTTTATTATTAAGAGCTAATTTGAAATGTTTGAGATTGTAAAAACTCAATTTCTATAGGCTAGGCAATAGTTCTGTGAGATAACTTGATTTTTGCGTGTATTAGCTGAACACTCACATTCTTCCAAAATAATACTAAGCACAATACATTCCTGGAGGTTGCAGCTATACCTTTCTTCATTTTAATCTACTTATGAGTCATCTGTTATTATGTTTCAATGCATTCGATGTCCAAGTGTATGCACTTTTCTGCATATGTCTGCAATAGCCTTCATATACTACATTCCTCTTGTCAAGTCTTTTTGATAGAGTATGGAAAATATTTAGCCATTTATTTTCTTTTAAGTAGTCTTGTGAAAATTATCTTATTTTTCCTTTTTGTTTTTCAGTGCAACTCGTGCCCGGAACTGAGGTAG

mRNA sequence

AACAATTTCACGGCAACTTTCTGCTCCGACGACTACATGACGACGAGCGACAACTGAGCCGACTTCAACTCCAACTCGCAAAGCCGTCACTGCCGGAGAAAGTTGGGATCGGAGAGCGCCTGGAACTCTCTCTCTTTTTGACGGTGTGAAGACCGGCGTCATAGCCATCGTCGGAGCACTCAATTTTCATTTTCATTACACGCGGCGGCCGACTTAATTCGGTATTGGAATTGCATTGCGCAATCTAATTCAGTCGCTTCTGCTGCGGGCTTCCGTTTGTGGAAATTCAATTCTTAGAGTGCTATGGAATTGGAGGTGAGGACTGTGGGAGGGATGGAGAACTGTTTTGTGTCACTTCCTCTCGTTTTCATCCAAACTCTCGAGAGGCGGTCTGGTTCTGGCTCGGCCATGGGCGGTCTCCCTGAATTCCTCGTTCTTGAACTTCGCGATTCCTCTTCCGATGAGGTTTGGACGGTTGCTTGGTCTGGCGCTTCGTCATCTTCTGCTGCAATTGAGGTCTCCAAGCAATTTGCAGATTGTATTTCCTTACCAGACTGTACCAGTGTTCAAGTTCGAGCTATTTCTAATGTGCCAAAGGCTACTGTAGTTACAATAGAGCCTTATGGTGAGGATGACTGGGAAGTTCTAGAGTTAAATGCAGAGCTTGCTGAGGCAGCCATATTGAACCAGGTCAGAATCATTCATGAAGCAATGCGATTTCCTTTGTGGTTACATGGTCGGACGGTTGTTACATTCCTTGTGGTTTCTACCTCTCCTAAGCGTGCGTGCAACTCGTGCCCGGAACTGAGGTAG

Coding sequence (CDS)

ATGGAATTGGAGGTGAGGACTGTGGGAGGGATGGAGAACTGTTTTGTGTCACTTCCTCTCGTTTTCATCCAAACTCTCGAGAGGCGGTCTGGTTCTGGCTCGGCCATGGGCGGTCTCCCTGAATTCCTCGTTCTTGAACTTCGCGATTCCTCTTCCGATGAGGTTTGGACGGTTGCTTGGTCTGGCGCTTCGTCATCTTCTGCTGCAATTGAGGTCTCCAAGCAATTTGCAGATTGTATTTCCTTACCAGACTGTACCAGTGTTCAAGTTCGAGCTATTTCTAATGTGCCAAAGGCTACTGTAGTTACAATAGAGCCTTATGGTGAGGATGACTGGGAAGTTCTAGAGTTAAATGCAGAGCTTGCTGAGGCAGCCATATTGAACCAGGTCAGAATCATTCATGAAGCAATGCGATTTCCTTTGTGGTTACATGGTCGGACGGTTGTTACATTCCTTGTGGTTTCTACCTCTCCTAAGCGTGCGTGCAACTCGTGCCCGGAACTGAGGTAG

Protein sequence

MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAWSGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAELAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRACNSCPELR

Homology

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BLAST of CmoCh18G005130 vs. ExPASy Swiss-Prot
Match: Q9FNP1 (Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana OX=3702 GN=PEX1 PE=1 SV=2)

HSP 1 Score: 180.3 bits (456), Expect = 1.9e-44
Identity = 97/159 (61.01%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 2   ELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAWS 61
           E  V TV G++ CFVSLP   +  L+  S S      LP  L +ELR  S D  W+VAWS
Sbjct: 17  EAVVNTVAGVD-CFVSLPRQLLHALQSTSSS-----PLPPLLPVELR--SGDRRWSVAWS 76

Query: 62  GASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAEL 121
           G+SSSS+AIE+++ FA+ ISLPD T V+VR + NVPKAT+VT+EP  EDDWEVLELNAEL
Sbjct: 77  GSSSSSSAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWEVLELNAEL 136

Query: 122 AEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKR 161
           AEAAIL+QVRI+HE M+FPLWLH RTV+ F VVST P +
Sbjct: 137 AEAAILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSK 167

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BLAST of CmoCh18G005130 vs. ExPASy Swiss-Prot
Match: Q54GX5 (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum OX=44689 GN=pex1 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-14
Identity = 48/163 (29.45%), Postives = 90/163 (55.21%), Query Frame = 0


Query: 1   MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGS-AMGGLPEFLVLELRDSSSDEVWTVA 60
           MEL V+ +    +CFVSLP   + +L   S   S ++G L   +    + +  +    V 
Sbjct: 1   MELHVQ-LKHSTDCFVSLPPKIVHSLLLLSEKQSKSLGTLGLEITWYDKINKKENKGYVG 60

Query: 61  WSGASSS---SAAIEVSKQFADCI-SLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVL 120
           W+G S+    + +IE+S++ A C+  + +   ++++A++N+  A  V +EP   DDWE++
Sbjct: 61  WAGGSTDPRFTDSIEMSQEMAQCLGGIKNEQKLKLKALNNIELAHSVQVEPLTSDDWEIM 120

Query: 121 ELNAELAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSP 159
           E++ +  E  +LNQV I++     P+W+H +T++   V  T P
Sbjct: 121 EVHQQYLEEQLLNQVNILYSGQIVPIWIHHKTIIKLKVTETLP 162

[Close]

BLAST of CmoCh18G005130 vs. ExPASy Swiss-Prot
Match: O43933 (Peroxisome biogenesis factor 1 OS=Homo sapiens OX=9606 GN=PEX1 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 28/88 (31.82%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 71  EVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAELAEAAILNQV 130
           E+++Q    + L +   V ++  S+V     V +EP   DDWE+LEL+A   E  +L+Q+
Sbjct: 75  EINRQVGQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQI 134

Query: 131 RIIHEAMRFPLWLHGRTVVTFLVVSTSP 159
           RI+     FP+W+  +T +   +V+  P
Sbjct: 135 RIVFPKAIFPVWVDQQTYIFIQIVALIP 162

[Close]

BLAST of CmoCh18G005130 vs. ExPASy Swiss-Prot
Match: Q5BL07 (Peroxisome biogenesis factor 1 OS=Mus musculus OX=10090 GN=Pex1 PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-07
Identity = 29/93 (31.18%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 66  SSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAELAEAA 125
           S    E+++Q    + L     V +R  S+V     V +EP   DDWE+LEL+A   E  
Sbjct: 70  SENVAEINRQVGQKLGLSSGDQVFLRPCSHVVSCQQVEVEPLSADDWEILELHAISLEQH 129

Query: 126 ILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSP 159
           +L+Q+RI+      P+W+  +T +   +V+  P
Sbjct: 130 LLDQIRIVFPKAVVPIWVDQQTYIFIQIVTLMP 162

[Close]

BLAST of CmoCh18G005130 vs. ExPASy Swiss-Prot
Match: P46463 (Peroxisome biosynthesis protein PAS1 OS=Komagataella pastoris OX=4922 GN=PEX1 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.0e-07
Identity = 30/104 (28.85%), Postives = 51/104 (49.04%), Query Frame = 0


Query: 56  WTVAWSGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVL 115
           W    +  SSS+  IE+ +  A  I L +  +V V    +  KA  V +EP   +DWE++
Sbjct: 60  WAGGITKTSSSNPVIEIDRSLASAIDLQENVNVTVNVHIDAVKAITVELEPVTSNDWEIV 119

Query: 116 ELNAELAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPK 160
           E +A++ E  +LNQ R ++      ++   +T    LV    P+
Sbjct: 120 ETHAQVLETYLLNQTRCVYPNQVLVVYPTPQTTARLLVKKIEPE 163

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BLAST of CmoCh18G005130 vs. ExPASy TrEMBL
Match: A0A6J1GS96 (Peroxin-1 OS=Cucurbita moschata OX=3662 GN=LOC111457058 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.8e-83
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60
           MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW
Sbjct: 1   MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60

Query: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120
           SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE
Sbjct: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120

Query: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 162
           LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA
Sbjct: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 161

[Close]

BLAST of CmoCh18G005130 vs. ExPASy TrEMBL
Match: A0A6J1JWN1 (Peroxin-1 OS=Cucurbita maxima OX=3661 GN=LOC111490363 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60
           MELEVRTVGGMENCFVSLPLV IQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW
Sbjct: 1   MELEVRTVGGMENCFVSLPLVLIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60

Query: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120
           SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE
Sbjct: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120

Query: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 162
           LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA
Sbjct: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 161

[Close]

BLAST of CmoCh18G005130 vs. ExPASy TrEMBL
Match: A0A5A7TIY1 (Peroxin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00340 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.2e-71
Identity = 139/161 (86.34%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 1   MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60
           MELEVRTVGGMENCFVSLPLV IQTLERR G  SAM  LPE LVLELR+SSSDEVWTV+W
Sbjct: 1   MELEVRTVGGMENCFVSLPLVLIQTLERRPGFASAMDRLPEILVLELRNSSSDEVWTVSW 60

Query: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120
           SGA+S+S+AIEV KQFADCISLPDCT+VQVRA+SNVP AT V IEPY EDDWEVLELNAE
Sbjct: 61  SGATSTSSAIEVCKQFADCISLPDCTTVQVRAVSNVPNATEVLIEPYSEDDWEVLELNAE 120

Query: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 162
           +AEAA+LNQVRIIHEAMRFPLWLHGRTVVTF VVSTSPKRA
Sbjct: 121 IAEAAMLNQVRIIHEAMRFPLWLHGRTVVTFRVVSTSPKRA 161

[Close]

BLAST of CmoCh18G005130 vs. ExPASy TrEMBL
Match: A0A1S3C9G0 (Peroxin-1 OS=Cucumis melo OX=3656 GN=LOC103498290 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.2e-71
Identity = 139/161 (86.34%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 1   MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60
           MELEVRTVGGMENCFVSLPLV IQTLERR G  SAM  LPE LVLELR+SSSDEVWTV+W
Sbjct: 1   MELEVRTVGGMENCFVSLPLVLIQTLERRPGFASAMDRLPEILVLELRNSSSDEVWTVSW 60

Query: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120
           SGA+S+S+AIEV KQFADCISLPDCT+VQVRA+SNVP AT V IEPY EDDWEVLELNAE
Sbjct: 61  SGATSTSSAIEVCKQFADCISLPDCTTVQVRAVSNVPNATEVLIEPYSEDDWEVLELNAE 120

Query: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 162
           +AEAA+LNQVRIIHEAMRFPLWLHGRTVVTF VVSTSPKRA
Sbjct: 121 IAEAAMLNQVRIIHEAMRFPLWLHGRTVVTFRVVSTSPKRA 161

[Close]

BLAST of CmoCh18G005130 vs. ExPASy TrEMBL
Match: A0A0A0LYG9 (Peroxin-1 OS=Cucumis sativus OX=3659 GN=Csa_1G716240 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.7e-69
Identity = 135/159 (84.91%), Postives = 146/159 (91.82%), Query Frame = 0


Query: 1   MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60
           MELEVRTVGGMENCFVSLPLV IQTLERR G  SAM  L E LVLELR+SSSDEVWTV+W
Sbjct: 1   MELEVRTVGGMENCFVSLPLVLIQTLERRPGFASAMDRLSEILVLELRNSSSDEVWTVSW 60

Query: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120
           SGA+S+S+AIEVSKQFADCISLPDCT+VQVRA+S+VP AT V IEPY EDDWEVLELNAE
Sbjct: 61  SGATSTSSAIEVSKQFADCISLPDCTTVQVRAVSSVPNATEVLIEPYSEDDWEVLELNAE 120

Query: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPK 160
           +AEAA+LNQ+RIIHEAMRFPLWLHGRTVVTF VVSTSPK
Sbjct: 121 IAEAAMLNQLRIIHEAMRFPLWLHGRTVVTFRVVSTSPK 159

[Close]

BLAST of CmoCh18G005130 vs. NCBI nr
Match: XP_022954952.1 (peroxisome biogenesis protein 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 317.8 bits (813), Expect = 5.7e-83
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60
           MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW
Sbjct: 1   MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60

Query: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120
           SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE
Sbjct: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120

Query: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 162
           LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA
Sbjct: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 161

[Close]

BLAST of CmoCh18G005130 vs. NCBI nr
Match: XP_022994717.1 (peroxisome biogenesis protein 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 315.5 bits (807), Expect = 2.9e-82
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60
           MELEVRTVGGMENCFVSLPLV IQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW
Sbjct: 1   MELEVRTVGGMENCFVSLPLVLIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60

Query: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120
           SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE
Sbjct: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120

Query: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 162
           LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA
Sbjct: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 161

[Close]

BLAST of CmoCh18G005130 vs. NCBI nr
Match: KAG6573441.1 (Peroxisome biogenesis protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315.5 bits (807), Expect = 2.9e-82
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60
           MELEVRTVGGMENCFVSLPLV IQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW
Sbjct: 1   MELEVRTVGGMENCFVSLPLVLIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60

Query: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120
           SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE
Sbjct: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120

Query: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 162
           LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA
Sbjct: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 161

[Close]

BLAST of CmoCh18G005130 vs. NCBI nr
Match: XP_023541051.1 (peroxisome biogenesis protein 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.1 bits (806), Expect = 3.7e-82
Identity = 159/161 (98.76%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60
           MELEVRTVGGMENCFVSLPLV IQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW
Sbjct: 1   MELEVRTVGGMENCFVSLPLVLIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60

Query: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120
           SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE
Sbjct: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120

Query: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 162
           LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLV+STSPKRA
Sbjct: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVISTSPKRA 161

[Close]

BLAST of CmoCh18G005130 vs. NCBI nr
Match: KAG7012585.1 (Peroxisome biogenesis protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315.1 bits (806), Expect = 3.7e-82
Identity = 159/161 (98.76%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60
           MELEVRTVGGMENCFVSLPL+ IQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW
Sbjct: 1   MELEVRTVGGMENCFVSLPLILIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAW 60

Query: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120
           SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE
Sbjct: 61  SGASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAE 120

Query: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 162
           LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA
Sbjct: 121 LAEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKRA 161

[Close]

BLAST of CmoCh18G005130 vs. TAIR 10
Match: AT5G08470.1 (peroxisome 1 )

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-45
Identity = 97/159 (61.01%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 2   ELEVRTVGGMENCFVSLPLVFIQTLERRSGSGSAMGGLPEFLVLELRDSSSDEVWTVAWS 61
           E  V TV G++ CFVSLP   +  L+  S S      LP  L +ELR  S D  W+VAWS
Sbjct: 17  EAVVNTVAGVD-CFVSLPRQLLHALQSTSSS-----PLPPLLPVELR--SGDRRWSVAWS 76

Query: 62  GASSSSAAIEVSKQFADCISLPDCTSVQVRAISNVPKATVVTIEPYGEDDWEVLELNAEL 121
           G+SSSS+AIE+++ FA+ ISLPD T V+VR + NVPKAT+VT+EP  EDDWEVLELNAEL
Sbjct: 77  GSSSSSSAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWEVLELNAEL 136

Query: 122 AEAAILNQVRIIHEAMRFPLWLHGRTVVTFLVVSTSPKR 161
           AEAAIL+QVRI+HE M+FPLWLH RTV+ F VVST P +
Sbjct: 137 AEAAILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSK 167

The following BLAST results are available for this feature:

BLAST of CmoCh18G005130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNP1	1.9e-44	61.01	Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana OX=3702 GN=PEX1 PE=1 SV=...	[more]
Q54GX5	1.2e-14	29.45	Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum OX=44689 GN=pex1 PE=3...	[more]
O43933	1.1e-07	31.82	Peroxisome biogenesis factor 1 OS=Homo sapiens OX=9606 GN=PEX1 PE=1 SV=1	[more]
Q5BL07	3.1e-07	31.18	Peroxisome biogenesis factor 1 OS=Mus musculus OX=10090 GN=Pex1 PE=1 SV=2	[more]
P46463	7.0e-07	28.85	Peroxisome biosynthesis protein PAS1 OS=Komagataella pastoris OX=4922 GN=PEX1 PE...	[more]

BLAST of CmoCh18G005130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GS96	2.8e-83	100.00	Peroxin-1 OS=Cucurbita moschata OX=3662 GN=LOC111457058 PE=4 SV=1	[more]
A0A6J1JWN1	1.4e-82	99.38	Peroxin-1 OS=Cucurbita maxima OX=3661 GN=LOC111490363 PE=4 SV=1	[more]
A0A5A7TIY1	3.2e-71	86.34	Peroxin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00340 PE=4...	[more]
A0A1S3C9G0	3.2e-71	86.34	Peroxin-1 OS=Cucumis melo OX=3656 GN=LOC103498290 PE=4 SV=1	[more]
A0A0A0LYG9	6.7e-69	84.91	Peroxin-1 OS=Cucumis sativus OX=3659 GN=Csa_1G716240 PE=4 SV=1	[more]

BLAST of CmoCh18G005130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954952.1	5.7e-83	100.00	peroxisome biogenesis protein 1 isoform X1 [Cucurbita moschata]	[more]
XP_022994717.1	2.9e-82	99.38	peroxisome biogenesis protein 1 isoform X1 [Cucurbita maxima]	[more]
KAG6573441.1	2.9e-82	99.38	Peroxisome biogenesis protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023541051.1	3.7e-82	98.76	peroxisome biogenesis protein 1 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7012585.1	3.7e-82	98.76	Peroxisome biogenesis protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh18G005130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08470.1	1.3e-45	61.01	peroxisome 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015342	Peroxisome biogenesis factor 1, N-terminal, psi beta-barrel fold	PFAM	PF09262	PEX-1N	coord: 102..159 e-value: 5.4E-19 score: 68.4
None	No IPR available	GENE3D	3.10.330.10		coord: 96..167 e-value: 1.0E-18 score: 69.6
None	No IPR available	PANTHER	PTHR23077:SF164	SUBFAMILY NOT NAMED	coord: 3..161
None	No IPR available	PANTHER	PTHR23077	AAA-FAMILY ATPASE	coord: 3..161
IPR009010	Aspartate decarboxylase-like domain superfamily	SUPERFAMILY	50692	ADC-like	coord: 10..94
IPR029067	CDC48 domain 2-like superfamily	SUPERFAMILY	54585	Cdc48 domain 2-like	coord: 97..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G005130.1	CmoCh18G005130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007031	peroxisome organization
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity