CmoCh18G004610 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh18G004610
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionglycine-rich protein
LocationCmo_Chr18: 3067711 .. 3070287 (-)
RNA-Seq ExpressionCmoCh18G004610
SyntenyCmoCh18G004610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAGCATGATGCAGATAACTGCGACACAGAATTCTCTCTGTCCCAATAAATCAATATGTCTTGTTTCTAAGTCAACGTATCCATCGTTCCTTGCTAGTCAGACACGAAGTGCTTTTGTGAATCCAAGTGCCAATGCATCTTATTTAAAGAAAGGTCTACCAGTATTGAAGTATGATCATCGGAGGGTTGGATTAAAACATCGGTATACCCCAATTGCTTCCTTGTTTGGTAGCAAGGGAAAGGACAATGCTGATGGGGTGAGAACATCTTTTACTTTGTTGTCATTGCTGTCTATTTATCAATTTTTTCTTTAACTATTTCTAAATTCTGTTCTTTGATGCTTTTTTCTGCCCGTAATACTTTGTCTAGCTCTCTTCTCTAACTAGTGGAACAAAAATTGTCTCTAACTAGATCGTACAATATGTGCTTCTTGCAAATCTTGTGTGTCATTTTGTCTTTTTCATGAAGCAATGGTTGATGGATTAGTACACTTGTCGGTAACGAAACAGAAATGACTGGAAAGCTTAATGTTGTAATTTATGTTTTGTTACTGACAAGTGTTTTAGTGTATTCACCAATGCGTTAACTTTGAAAACGTCAGCTATTGCAGTAAGTTCTTCATCAATGGATTAACTTTTCATGTCCGATCATACTTTTGATTTTATGCTCTTGATTTTTGTGATATCGAAGAAAAAACTCGAGTGTCAGAATTGCAGCTAGTTTTGCAAGCAAGGTAGAACATCTTAAACATTGTGGATGGAGGATTTGGAGTGTTTTTTTCTTTTTTTTTTTTCAAATGAGTAAATCTCAACTTTGGAGTTTGATAAGTTGCTATTTATTTAAGAGGTATCTGCAAATCTAGATACTAATGGTACCTTGTTTCTAGCAGGGTTCTCCATGGAAAGCTTTCGACAAAGTTGTTGAAAATTTTAAGAAGGGACGATCAGTAGAAGATATATTGCGACAGCAAATTGAAAACAAAGACTTCTATGATGGTGGAGATGGTGGAAGAACACCTCCAGGTGGTGGCGGTGGCGGTGGCAGCAGTGGCGGGGATAGCTCCAGTGAATCTGAGGATCCTAGCATTTTAGGAATTCTGGAAGAAACAATGCATGTAGTTCTGGCGACCATTGGCCTTGTTTTAGTGGTAATAATCATTTTCTTAGCTAAGCTCTAGATGTGTAGCTACAACTTCACCGAAGGAGGCATACTATAAGTATACTAGATTAGTAACCGCTGGATGGGTGATCCGGGAACAGCAACGGGAGAGGGCTCGTAGCCCCCCCTCTCCCTCTTCCTCGCGCCTATTTGTTCTCCCGGCAGTTTTTTTGTCCTCTCTTCTTAGTCAAGCTAGAGAAATTGCTATATCTTCTTCCATAGCTCTTAAAGGAAAAAGATTTTGTACAACAAACTATTGGCCTTTTTAGACTTGGCTTGAGTGTTGTAGCTTTCCGTGGATGCAGGGTTATATTCTTCACCCTCATCATTCGGCCAGCTCAACGCTAAAAATTGAAGGTTCAAGCTCAGCCCAAGTCCACGTCCAATAGGCCTAACACACTGTTTGCCCCGGATTGAGCTAGACCCAACCTTAAATAGCAAGCTCATGGCTCAAACCTTGGACTTGGGTTGAGCTTGGATCAAGCCTAGGCTAGACTTCGAGCCCGTTGATGAAGCCGAAGTATTCTCGAGGAAAATCATGTTGTATTCTCGAGGAAAATCATGTTGCTTTGGATACATTAGTAATATCTTAGTTGTGGGGAAATCTTAGGAACATTTGAATTGTGGGTTGTGTACTTACAAGTTAAGTTACAAAGCTTCACTTATGTTTTATTGTTTGAATGTTTGTTTGGGCAGTACATTTACATCATTGAAGGGCAAGAGCTGGTTCTATTAGCAAAGGATTACATCAAATACCTCTTCGGAGCAGACCGGAGTGCCCGCTTGAAGAGCGCAATGTACAGTTGGGGAAAGTTTTACAAAAGACGCACTCAAAAGAAGCCGAAACCTGATGAATATTGGCTGGAGAAAGCTATTCTGAACACCCCAACATGGTGGGATCATCCTGATAAGTACAGGTACGCCATAATGGAATATTTAGAATCTCAGGGTCAGCTAGAGAGTCCTGCGTCGTCGTCGTCGTCATCATCATCCTCATCCTCGTCATATGATGCCTCATCATCATCATCATATGACGATGAGGAATATGAGGAGTCAAATTCTGATGATGAACAATTCTGATTCCATTTGCTTTTAAACCAACCTTTTGGTTTTTTGCTTACAACTTCGTTTTCTGAAATGCTAAATTAGATATCTTATGGGTTTTTGGTGTAATGATATACAGTACAGAACATGGATCTGCTTGGTCACTTTTTCACCACTCTTTAAACTGTTCTTGGTTATCTGATCTCGAAATGTTTCTGGGTGCTTGGAAGTAGATTAGTAAGAAAACGTGAAATTTAGTCGCGACGATCATTTTAAAGATGTGTGGAGTTAGACCTGTGATAACGGTGTAAATGGTTCTATTTGGTTCGATTCAAACTTTGGCCGAAGTTGATAAGAAACCAGAAAAGTAA

mRNA sequence

ATGAGTAGCATGATGCAGATAACTGCGACACAGAATTCTCTCTGTCCCAATAAATCAATATGTCTTGTTTCTAAGTCAACGTATCCATCGTTCCTTGCTAGTCAGACACGAAGTGCTTTTGTGAATCCAAGTGCCAATGCATCTTATTTAAAGAAAGGTCTACCAGTATTGAAGTATGATCATCGGAGGGTTGGATTAAAACATCGGTATACCCCAATTGCTTCCTTGTTTGGTAGCAAGGGAAAGGACAATGCTGATGGGGGTTCTCCATGGAAAGCTTTCGACAAAGTTGTTGAAAATTTTAAGAAGGGACGATCAGTAGAAGATATATTGCGACAGCAAATTGAAAACAAAGACTTCTATGATGGTGGAGATGGTGGAAGAACACCTCCAGGTGGTGGCGGTGGCGGTGGCAGCAGTGGCGGGGATAGCTCCAGTGAATCTGAGGATCCTAGCATTTTAGGAATTCTGGAAGAAACAATGCATGTAGTTCTGGCGACCATTGGCCTTGTTTTAGTGTACATTTACATCATTGAAGGGCAAGAGCTGGTTCTATTAGCAAAGGATTACATCAAATACCTCTTCGGAGCAGACCGGAGTGCCCGCTTGAAGAGCGCAATGTACAGTTGGGGAAAGTTTTACAAAAGACGCACTCAAAAGAAGCCGAAACCTGATGAATATTGGCTGGAGAAAGCTATTCTGAACACCCCAACATGGTGGGATCATCCTGATAAGTACAGGTACGCCATAATGGAATATTTAGAATCTCAGGGTCAGCTAGAGAGTCCTGCGTCGTCGTCGTCGTCATCATCATCCTCATCCTCGTCATATGATGCCTCATCATCATCATCATATGACGATGAGGAATATGAGGAGTCAAATTCTGATGATGAACAATTCTGATTCCATTTGCTTTTAAACCAACCTTTTGGTTTTTTGCTTACAACTTCGTTTTCTGAAATGCTAAATTAGATATCTTATGGGTTTTTGGTGTAATGATATACAGTACAGAACATGGATCTGCTTGGTCACTTTTTCACCACTCTTTAAACTGTTCTTGGTTATCTGATCTCGAAATGTTTCTGGGTGCTTGGAAGTAGATTAGTAAGAAAACGTGAAATTTAGTCGCGACGATCATTTTAAAGATGTGTGGAGTTAGACCTGTGATAACGGTGTAAATGGTTCTATTTGGTTCGATTCAAACTTTGGCCGAAGTTGATAAGAAACCAGAAAAGTAA

Coding sequence (CDS)

ATGAGTAGCATGATGCAGATAACTGCGACACAGAATTCTCTCTGTCCCAATAAATCAATATGTCTTGTTTCTAAGTCAACGTATCCATCGTTCCTTGCTAGTCAGACACGAAGTGCTTTTGTGAATCCAAGTGCCAATGCATCTTATTTAAAGAAAGGTCTACCAGTATTGAAGTATGATCATCGGAGGGTTGGATTAAAACATCGGTATACCCCAATTGCTTCCTTGTTTGGTAGCAAGGGAAAGGACAATGCTGATGGGGGTTCTCCATGGAAAGCTTTCGACAAAGTTGTTGAAAATTTTAAGAAGGGACGATCAGTAGAAGATATATTGCGACAGCAAATTGAAAACAAAGACTTCTATGATGGTGGAGATGGTGGAAGAACACCTCCAGGTGGTGGCGGTGGCGGTGGCAGCAGTGGCGGGGATAGCTCCAGTGAATCTGAGGATCCTAGCATTTTAGGAATTCTGGAAGAAACAATGCATGTAGTTCTGGCGACCATTGGCCTTGTTTTAGTGTACATTTACATCATTGAAGGGCAAGAGCTGGTTCTATTAGCAAAGGATTACATCAAATACCTCTTCGGAGCAGACCGGAGTGCCCGCTTGAAGAGCGCAATGTACAGTTGGGGAAAGTTTTACAAAAGACGCACTCAAAAGAAGCCGAAACCTGATGAATATTGGCTGGAGAAAGCTATTCTGAACACCCCAACATGGTGGGATCATCCTGATAAGTACAGGTACGCCATAATGGAATATTTAGAATCTCAGGGTCAGCTAGAGAGTCCTGCGTCGTCGTCGTCGTCATCATCATCCTCATCCTCGTCATATGATGCCTCATCATCATCATCATATGACGATGAGGAATATGAGGAGTCAAATTCTGATGATGAACAATTCTGA

Protein sequence

MSSMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYDHRRVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDFYDGGDGGRTPPGGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEGQELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWWDHPDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDEQF
Homology
BLAST of CmoCh18G004610 vs. ExPASy TrEMBL
Match: A0A6J1GSZ4 (uncharacterized protein LOC111457207 OS=Cucurbita moschata OX=3662 GN=LOC111457207 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.0e-157
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0

Query: 1   MSSMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYD 60
           MSSMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYD
Sbjct: 1   MSSMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYD 60

Query: 61  HRRVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDF 120
           HRRVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDF
Sbjct: 61  HRRVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDF 120

Query: 121 YDGGDGGRTPPGGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEG 180
           YDGGDGGRTPPGGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEG
Sbjct: 121 YDGGDGGRTPPGGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEG 180

Query: 181 QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWW 240
           QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWW
Sbjct: 181 QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWW 240

Query: 241 DHPDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDEQF 300
           DHPDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDEQF
Sbjct: 241 DHPDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDEQF 300

BLAST of CmoCh18G004610 vs. ExPASy TrEMBL
Match: A0A6J1K2H4 (uncharacterized protein LOC111490456 OS=Cucurbita maxima OX=3661 GN=LOC111490456 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.5e-143
Identity = 278/300 (92.67%), Postives = 283/300 (94.33%), Query Frame = 0

Query: 1   MSSMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYD 60
           M SMMQITATQNSLCPNKS+CLVSKS+YPSFLASQTRSAFVNPSAN SYLKKGLPVLKYD
Sbjct: 1   MCSMMQITATQNSLCPNKSLCLVSKSSYPSFLASQTRSAFVNPSANTSYLKKGLPVLKYD 60

Query: 61  HRRVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDF 120
           HRRVGLKHRYTPIASLFGSKGKDN DGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDF
Sbjct: 61  HRRVGLKHRYTPIASLFGSKGKDNGDGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDF 120

Query: 121 YDGGDGGRTPPGGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEG 180
           YDGGDGGRTPP  GGGGGSSGGDSSSESED +ILGILEETMHVVLATIGLVLVYIYIIEG
Sbjct: 121 YDGGDGGRTPP--GGGGGSSGGDSSSESEDHNILGILEETMHVVLATIGLVLVYIYIIEG 180

Query: 181 QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWW 240
           QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRT+KK KPDEYWLEKAILNTPTWW
Sbjct: 181 QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTRKKQKPDEYWLEKAILNTPTWW 240

Query: 241 DHPDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDEQF 300
           DHPDKYRYAIMEYLESQ Q ESPA+SSSSSS        SSSSSYDDEEYEESNSDDEQF
Sbjct: 241 DHPDKYRYAIMEYLESQRQQESPAASSSSSS--------SSSSSYDDEEYEESNSDDEQF 290

BLAST of CmoCh18G004610 vs. ExPASy TrEMBL
Match: A0A6J1CES8 (uncharacterized protein LOC111010834 OS=Momordica charantia OX=3673 GN=LOC111010834 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 3.0e-96
Identity = 191/296 (64.53%), Postives = 231/296 (78.04%), Query Frame = 0

Query: 3   SMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYDHR 62
           S MQITATQNS+C ++SIC+ SKS YPSF A+++RSA VN SANASY K+GLPVLKY HR
Sbjct: 2   SSMQITATQNSICSSRSICIASKSIYPSFRATRSRSALVNLSANASYFKQGLPVLKYKHR 61

Query: 63  RVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDFYD 122
           R GL H++TPI SLFGSKGK++ DGGSPWK FDKVVENFKKGRSVED+LRQQIE K+FYD
Sbjct: 62  RAGLNHQHTPIVSLFGSKGKESGDGGSPWKTFDKVVENFKKGRSVEDVLRQQIEKKEFYD 121

Query: 123 GGDGGRTPPGGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEGQE 182
           GGDGG+ PP GGGG     GDSSS SED S+ GI++ET+ V+LATIG + +YIYII G+E
Sbjct: 122 GGDGGKRPPSGGGG----SGDSSSGSEDDSLGGIIDETLQVILATIGFIFLYIYIISGEE 181

Query: 183 LVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWWDH 242
           L  LAKDYIK++FG  +S RLK AMY WG+FY++ T+KK + DEYWLEKAI+NTPTWWDH
Sbjct: 182 LTRLAKDYIKFVFGGSKSVRLKRAMYKWGRFYQKLTEKK-QYDEYWLEKAIINTPTWWDH 241

Query: 243 PDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDE 299
           PDKYR A+M+Y+ESQ + +  AS+ +                 DD E + SNSDDE
Sbjct: 242 PDKYRRAVMDYMESQYENQHSASNVN-----------------DDAEMDVSNSDDE 275

BLAST of CmoCh18G004610 vs. ExPASy TrEMBL
Match: A0A0A0LVP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534740 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 2.1e-89
Identity = 177/249 (71.08%), Postives = 205/249 (82.33%), Query Frame = 0

Query: 3   SMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYDHR 62
           S MQITATQNS+C NKSICLVSKS YPSF A+Q+R A VN SANASY K+GLPVLKY+HR
Sbjct: 2   SSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEHR 61

Query: 63  RVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDFYD 122
           RVGLK+++TPI SL+GSKGK + DGGSPWK  DKVVE+F KGRSVED+LRQQIE K+FYD
Sbjct: 62  RVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESF-KGRSVEDVLRQQIEKKEFYD 121

Query: 123 GGDGGRTPPGGGGG-----GGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYI 182
           GGDGG+ PPGGGGG      G  G DSSS SED S+ GI++E + V+LAT+GLV VYIYI
Sbjct: 122 GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI 181

Query: 183 IEGQELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTP 242
           + G+EL  LAKDYIKYLFG  +S RLK AMY+WGKFY +   KK K D+YWLEKAIL+TP
Sbjct: 182 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFY-QSLMKKKKYDQYWLEKAILSTP 241

Query: 243 TWWDHPDKY 247
           TWWD+PDKY
Sbjct: 242 TWWDNPDKY 248

BLAST of CmoCh18G004610 vs. ExPASy TrEMBL
Match: A0A1S3BA69 (uncharacterized protein LOC103487859 OS=Cucumis melo OX=3656 GN=LOC103487859 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 2.1e-89
Identity = 178/282 (63.12%), Postives = 216/282 (76.60%), Query Frame = 0

Query: 3   SMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYDHR 62
           S MQITATQNS+C NKSICLVSKS YPSF A+Q+  A VN SANASY K+GLP+LKY HR
Sbjct: 2   SSMQITATQNSICANKSICLVSKSIYPSFHANQSLRAVVNLSANASYFKQGLPILKYKHR 61

Query: 63  RVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDFYD 122
           RVGLKH++TPI SLFGSKGK + DGGSPWKAFDKVVE+FKKG SVED+LR+QIE K+FYD
Sbjct: 62  RVGLKHQHTPIVSLFGSKGKGSDDGGSPWKAFDKVVESFKKGGSVEDVLRKQIEKKEFYD 121

Query: 123 GGDGGRTPPGGGGGGGSSGG-------DSSSESEDPSILGILEETMHVVLATIGLVLVYI 182
           GGDGGR PP GGGGGG  GG       DSSS ++D S+   L+ET+ VVLAT+G + +Y 
Sbjct: 122 GGDGGRRPPSGGGGGGGGGGGGGSGSEDSSSGAKDFSLAEALDETLQVVLATLGFIFMYF 181

Query: 183 YIIEGQELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILN 242
           Y++ G+E+  L KDYIKY FG  +S RL+ AMY WG+FY+R T KK K DE+WLEKAI+N
Sbjct: 182 YLLNGEEVTRLLKDYIKYRFGGSKSVRLRRAMYEWGRFYQRLTAKK-KYDEFWLEKAIIN 241

Query: 243 TPTWWDHPDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSY 278
           TPTWWDHPD YR+A M Y +++ Q ++ AS     +     +
Sbjct: 242 TPTWWDHPDNYRHAAMAYGKAENQEKNFASDDDGETDDDEEF 282

BLAST of CmoCh18G004610 vs. NCBI nr
Match: XP_022955156.1 (uncharacterized protein LOC111457207 [Cucurbita moschata])

HSP 1 Score: 564.3 bits (1453), Expect = 6.3e-157
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0

Query: 1   MSSMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYD 60
           MSSMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYD
Sbjct: 1   MSSMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYD 60

Query: 61  HRRVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDF 120
           HRRVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDF
Sbjct: 61  HRRVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDF 120

Query: 121 YDGGDGGRTPPGGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEG 180
           YDGGDGGRTPPGGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEG
Sbjct: 121 YDGGDGGRTPPGGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEG 180

Query: 181 QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWW 240
           QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWW
Sbjct: 181 QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWW 240

Query: 241 DHPDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDEQF 300
           DHPDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDEQF
Sbjct: 241 DHPDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDEQF 300

BLAST of CmoCh18G004610 vs. NCBI nr
Match: XP_023542514.1 (uncharacterized protein LOC111802398 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 530.4 bits (1365), Expect = 1.0e-146
Identity = 285/300 (95.00%), Postives = 288/300 (96.00%), Query Frame = 0

Query: 1   MSSMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYD 60
           MSSMMQITATQNSLCPNKSICLVSKS YPSFLASQTRSAFVNPSANASYLKKGLPVLKYD
Sbjct: 1   MSSMMQITATQNSLCPNKSICLVSKSMYPSFLASQTRSAFVNPSANASYLKKGLPVLKYD 60

Query: 61  HRRVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDF 120
           HRRVGLKHRYTPIASLFGSKGKD+ DG SPWKAFDKVVENFKKGRSVEDILRQQIENKDF
Sbjct: 61  HRRVGLKHRYTPIASLFGSKGKDSGDGASPWKAFDKVVENFKKGRSVEDILRQQIENKDF 120

Query: 121 YDGGDGGRTPPGGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEG 180
           YDGGDGGRTPPGGGGGGGSSGGDSSSESE PSILGILEETMHVVLATIGLVLVYIYIIEG
Sbjct: 121 YDGGDGGRTPPGGGGGGGSSGGDSSSESEGPSILGILEETMHVVLATIGLVLVYIYIIEG 180

Query: 181 QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWW 240
           QELVLL KDYIKYLFGAD+SARLKSAMYSWGKFYKRRT+KKPKPDEYWLEKAILNTPTWW
Sbjct: 181 QELVLLVKDYIKYLFGADQSARLKSAMYSWGKFYKRRTRKKPKPDEYWLEKAILNTPTWW 240

Query: 241 DHPDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDEQF 300
           DHPDKYRYAIMEYLESQGQLESPASS SS SSSSS    SSS SYDDEEYEESNSDDEQF
Sbjct: 241 DHPDKYRYAIMEYLESQGQLESPASSPSSPSSSSS----SSSLSYDDEEYEESNSDDEQF 296

BLAST of CmoCh18G004610 vs. NCBI nr
Match: XP_022994855.1 (uncharacterized protein LOC111490456 [Cucurbita maxima])

HSP 1 Score: 516.2 bits (1328), Expect = 2.0e-142
Identity = 278/300 (92.67%), Postives = 283/300 (94.33%), Query Frame = 0

Query: 1   MSSMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYD 60
           M SMMQITATQNSLCPNKS+CLVSKS+YPSFLASQTRSAFVNPSAN SYLKKGLPVLKYD
Sbjct: 1   MCSMMQITATQNSLCPNKSLCLVSKSSYPSFLASQTRSAFVNPSANTSYLKKGLPVLKYD 60

Query: 61  HRRVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDF 120
           HRRVGLKHRYTPIASLFGSKGKDN DGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDF
Sbjct: 61  HRRVGLKHRYTPIASLFGSKGKDNGDGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDF 120

Query: 121 YDGGDGGRTPPGGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEG 180
           YDGGDGGRTPP  GGGGGSSGGDSSSESED +ILGILEETMHVVLATIGLVLVYIYIIEG
Sbjct: 121 YDGGDGGRTPP--GGGGGSSGGDSSSESEDHNILGILEETMHVVLATIGLVLVYIYIIEG 180

Query: 181 QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWW 240
           QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRT+KK KPDEYWLEKAILNTPTWW
Sbjct: 181 QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTRKKQKPDEYWLEKAILNTPTWW 240

Query: 241 DHPDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDEQF 300
           DHPDKYRYAIMEYLESQ Q ESPA+SSSSSS        SSSSSYDDEEYEESNSDDEQF
Sbjct: 241 DHPDKYRYAIMEYLESQRQQESPAASSSSSS--------SSSSSYDDEEYEESNSDDEQF 290

BLAST of CmoCh18G004610 vs. NCBI nr
Match: XP_038895689.1 (uncharacterized protein LOC120083861 [Benincasa hispida])

HSP 1 Score: 364.4 bits (934), Expect = 9.5e-97
Identity = 197/297 (66.33%), Postives = 229/297 (77.10%), Query Frame = 0

Query: 3   SMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYDHR 62
           S MQITATQNS+C NKSICLVSKS YPSF ASQ+RS  VN SAN S  K+GLPVLKY HR
Sbjct: 2   SSMQITATQNSICSNKSICLVSKSIYPSFHASQSRSVLVNLSANGSSFKQGLPVLKYKHR 61

Query: 63  RVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDFYD 122
           RVGLKH++TPI SLFGSKGKD  DGGSPWKAFD+VVENFKKGRSVED+LRQQIE K+FYD
Sbjct: 62  RVGLKHQHTPIVSLFGSKGKDTGDGGSPWKAFDQVVENFKKGRSVEDVLRQQIEKKEFYD 121

Query: 123 GGDGGRTPPGGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEGQE 182
           GG+GG+ PP GGGG GS  GDSSS SED S+ GIL+ET+ VVLAT+G + +YIYII G+E
Sbjct: 122 GGNGGKRPPSGGGGSGS--GDSSSGSEDDSLAGILDETLQVVLATLGFIFLYIYIINGEE 181

Query: 183 LVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWWDH 242
           L  LAKDYIKYLFG  +S RL+ +MY WG+FY++ T+KK + DEYWLEKAILNTPTWWDH
Sbjct: 182 LARLAKDYIKYLFGGSKSVRLRRSMYQWGRFYQKLTEKK-QYDEYWLEKAILNTPTWWDH 241

Query: 243 PDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDEQ 300
           PD YR  +M ++ESQ Q E+ AS                    D  E ++ NSDDE+
Sbjct: 242 PDNYRRTVMAHIESQHQKENFASD-------------------DYGEVDKPNSDDEE 276

BLAST of CmoCh18G004610 vs. NCBI nr
Match: XP_022140099.1 (uncharacterized protein LOC111010834 [Momordica charantia])

HSP 1 Score: 361.7 bits (927), Expect = 6.2e-96
Identity = 191/296 (64.53%), Postives = 231/296 (78.04%), Query Frame = 0

Query: 3   SMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYDHR 62
           S MQITATQNS+C ++SIC+ SKS YPSF A+++RSA VN SANASY K+GLPVLKY HR
Sbjct: 2   SSMQITATQNSICSSRSICIASKSIYPSFRATRSRSALVNLSANASYFKQGLPVLKYKHR 61

Query: 63  RVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDFYD 122
           R GL H++TPI SLFGSKGK++ DGGSPWK FDKVVENFKKGRSVED+LRQQIE K+FYD
Sbjct: 62  RAGLNHQHTPIVSLFGSKGKESGDGGSPWKTFDKVVENFKKGRSVEDVLRQQIEKKEFYD 121

Query: 123 GGDGGRTPPGGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEGQE 182
           GGDGG+ PP GGGG     GDSSS SED S+ GI++ET+ V+LATIG + +YIYII G+E
Sbjct: 122 GGDGGKRPPSGGGG----SGDSSSGSEDDSLGGIIDETLQVILATIGFIFLYIYIISGEE 181

Query: 183 LVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWWDH 242
           L  LAKDYIK++FG  +S RLK AMY WG+FY++ T+KK + DEYWLEKAI+NTPTWWDH
Sbjct: 182 LTRLAKDYIKFVFGGSKSVRLKRAMYKWGRFYQKLTEKK-QYDEYWLEKAIINTPTWWDH 241

Query: 243 PDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDE 299
           PDKYR A+M+Y+ESQ + +  AS+ +                 DD E + SNSDDE
Sbjct: 242 PDKYRRAVMDYMESQYENQHSASNVN-----------------DDAEMDVSNSDDE 275

BLAST of CmoCh18G004610 vs. TAIR 10
Match: AT2G43630.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 162.9 bits (411), Expect = 3.9e-40
Identity = 108/261 (41.38%), Postives = 147/261 (56.32%), Query Frame = 0

Query: 45  ANASYLKKGLPVLKYDHRRVGLKHRYTPIASLFGSKGK-DNADGGSPWKAFDKVVENFKK 104
           A A+   +  P+L +  R    K + +    LFG K K D +D  SPWKA +K +     
Sbjct: 47  ATAAVSTQFSPLLDHRRRLPTGKSKQSSAVCLFGGKDKPDGSDEISPWKAIEKAMGK--- 106

Query: 105 GRSVEDILRQQIENKDFYDGGDGGRTPP-GGGGGGGSSGGDSSSE---SEDPSILGILEE 164
            +SVED+LR+QI+ KDFYD   GG  PP GGG GGG   G+   E    ED  + GI +E
Sbjct: 107 -KSVEDMLREQIQKKDFYDTDSGGNMPPRGGGSGGGGGNGEERPEGSGGEDGGLAGIADE 166

Query: 165 TMHVVLATIGLVLVYIYIIEGQELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQ 224
           T+ VVLAT+G + +Y YII G+ELV LA+DYI++L G  ++ RL  AM SW  F ++ ++
Sbjct: 167 TLQVVLATLGFIFLYTYIITGEELVKLARDYIRFLMGRPKTVRLTRAMDSWNGFLEKMSR 226

Query: 225 KKPKPDEYWLEKAILNTPTWWDHPDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDA 284
           ++   DEYWLEKAI+NTPTW+D P+KYR  I  Y++S                       
Sbjct: 227 QRVY-DEYWLEKAIINTPTWYDSPEKYRRVIKAYVDSN---------------------- 274

Query: 285 SSSSSYDDEEYEESNSDDEQF 301
                  DE Y ESNSD+  +
Sbjct: 287 ------SDEAYVESNSDEVSY 274

BLAST of CmoCh18G004610 vs. TAIR 10
Match: AT3G59640.1 (glycine-rich protein )

HSP 1 Score: 110.5 bits (275), Expect = 2.3e-24
Identity = 86/240 (35.83%), Postives = 127/240 (52.92%), Query Frame = 0

Query: 7   ITATQNSLCPNKSICL-------VSKSTYPSFLASQTR---SAFVNPSANASYLKKGLPV 66
           +++TQ +LC     C        VS + + S L    R      +  SA++S   +  P+
Sbjct: 1   MSSTQANLCRPSLFCARTTQTRHVSSAPFMSSLRFDYRPLPKLAIRASASSSMSSQFSPL 60

Query: 67  LKYDHRRVGLKHRYTPIASLFGSKGKDNADG--GSPWKAFDKVVENFKKGRSVEDILRQQ 126
             +  R      R  P+  L G K K N      S W+A +K +      +SVED+LR+Q
Sbjct: 61  QNHRCR----NQRQGPVVCLLGGKDKSNGSNELSSTWEAIEKAMGK----KSVEDMLREQ 120

Query: 127 IENKDFYDGGDGGRTPPG-GGGGGGSSGGDS---SSESEDPSILGILEETMHVVLATIGL 186
           I+ KD      GG  P G GGGGGG +GG++    S  ED  +    +ET+ VVLAT+G 
Sbjct: 121 IQKKD-----TGGIPPRGRGGGGGGRNGGNNGSGGSSGEDGGLASFGDETLQVVLATLGF 180

Query: 187 VLVYIYIIEGQELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLE 231
           + +Y YII G+EL  LA+DYI+YL G  +S RL   M  W +F+++ ++KK   +EYWL+
Sbjct: 181 IFLYFYIINGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSRFFEKMSRKKVY-NEYWLK 226

BLAST of CmoCh18G004610 vs. TAIR 10
Match: AT3G59640.2 (glycine-rich protein )

HSP 1 Score: 110.5 bits (275), Expect = 2.3e-24
Identity = 86/240 (35.83%), Postives = 127/240 (52.92%), Query Frame = 0

Query: 7   ITATQNSLCPNKSICL-------VSKSTYPSFLASQTR---SAFVNPSANASYLKKGLPV 66
           +++TQ +LC     C        VS + + S L    R      +  SA++S   +  P+
Sbjct: 1   MSSTQANLCRPSLFCARTTQTRHVSSAPFMSSLRFDYRPLPKLAIRASASSSMSSQFSPL 60

Query: 67  LKYDHRRVGLKHRYTPIASLFGSKGKDNADG--GSPWKAFDKVVENFKKGRSVEDILRQQ 126
             +  R      R  P+  L G K K N      S W+A +K +      +SVED+LR+Q
Sbjct: 61  QNHRCR----NQRQGPVVCLLGGKDKSNGSNELSSTWEAIEKAMGK----KSVEDMLREQ 120

Query: 127 IENKDFYDGGDGGRTPPG-GGGGGGSSGGDS---SSESEDPSILGILEETMHVVLATIGL 186
           I+ KD      GG  P G GGGGGG +GG++    S  ED  +    +ET+ VVLAT+G 
Sbjct: 121 IQKKD-----TGGIPPRGRGGGGGGRNGGNNGSGGSSGEDGGLASFGDETLQVVLATLGF 180

Query: 187 VLVYIYIIEGQELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLE 231
           + +Y YII G+EL  LA+DYI+YL G  +S RL   M  W +F+++ ++KK   +EYWL+
Sbjct: 181 IFLYFYIINGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSRFFEKMSRKKVY-NEYWLK 226

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GSZ43.0e-157100.00uncharacterized protein LOC111457207 OS=Cucurbita moschata OX=3662 GN=LOC1114572... [more]
A0A6J1K2H49.5e-14392.67uncharacterized protein LOC111490456 OS=Cucurbita maxima OX=3661 GN=LOC111490456... [more]
A0A6J1CES83.0e-9664.53uncharacterized protein LOC111010834 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A0A0LVP52.1e-8971.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534740 PE=4 SV=1[more]
A0A1S3BA692.1e-8963.12uncharacterized protein LOC103487859 OS=Cucumis melo OX=3656 GN=LOC103487859 PE=... [more]
Match NameE-valueIdentityDescription
XP_022955156.16.3e-157100.00uncharacterized protein LOC111457207 [Cucurbita moschata][more]
XP_023542514.11.0e-14695.00uncharacterized protein LOC111802398 [Cucurbita pepo subsp. pepo][more]
XP_022994855.12.0e-14292.67uncharacterized protein LOC111490456 [Cucurbita maxima][more]
XP_038895689.19.5e-9766.33uncharacterized protein LOC120083861 [Benincasa hispida][more]
XP_022140099.16.2e-9664.53uncharacterized protein LOC111010834 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT2G43630.13.9e-4041.38FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT3G59640.12.3e-2435.83glycine-rich protein [more]
AT3G59640.22.3e-2435.83glycine-rich protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..283
NoneNo IPR availablePANTHERPTHR35483NUCLEUSENVELOPE PROTEINcoord: 3..259
NoneNo IPR availablePANTHERPTHR35483:SF1NUCLEUSENVELOPE PROTEINcoord: 3..259

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G004610.1CmoCh18G004610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane