CmoCh18G003590 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh18G003590
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionlate embryogenesis abundant protein, group 3-like
LocationCmo_Chr18: 2339059 .. 2340411 (+)
RNA-Seq ExpressionCmoCh18G003590
SyntenyCmoCh18G003590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAACGAGGCAAACAAACACATCACCACGTGGCAAAAGCCCCACGTGTCACATGCTAAACTCTGCCACTTCTTCCTATAAACCACACCTTACAAACCCCTTCAAATCAACACGTTCAGATTCACAAAAAAACACATACAGAGAAAGAGAGAACTACGGTCGGTGTCGGCTGTCGGTGTCGGTGTTCGAACTGAAACAATGGCAGTAAGCATTTCCTTAGCCAAAAATGTCATCTTCAACCTCTGGAAGGCCTTTCCCAATGCCTCTCCTTCTCAAACTCTCAGATATTCCTCCAAGATTTCAAGGGTCTCTTTCACTACTTCCGCCTCTAAGCAACCATGGGTATCATTCCTTACACCAATTTCATGATTTAAAATTGTTATTTTAGTGATTTGTTTCATGGGTTTTGTTCGTCGTATAGAATGGACATGGCGCGGATGCGAACCGAGACCCGAGACCGGATTTAGCATACGAAGATGCGAAGGAAAGAGCCAAGGAAGGAGCCTATGACATGAAGGAGAAGGCGAAAGACTACGCCGAGGGGACGAAAGACATGGCGAAGGAAGAAACCAACAAGGCTGCGGAGACAGCGCGGGCTGCGAAGGAGAAGGTGAAAGACTACGCCGACGATGCGAGGGAGAAGGCTAAGGAAGGGACGAATAGGGTAGCGGAGACGGCGGAGGATGCGAGCGAGAGAGCGAAGGAAAGTGCGAAGGGAATGAAGGAGAAGACGGAGGAGATGGCGAAGGAGGGGACGAAGAAGGCGACGGAGACGGTGCAGAATATTGGGGAGAAGGCGAAGAGGACAGTGGAAGGGGCATGGGAGGCGGCTAAGGATACAACGCAGAAGATAAAGGAGAGGGTTGTAGGGTCAGATGAAGATGAGAGGGATGAAGATGTTGTGGATGTTAGGAGAAAAAGTGGGAGAAAGTTGGATGATTGAAATAATGGGTGGAGTTCCTTTTAGTTGCATCAATGAAATTTCATGTTGTTTTAGGCTTTTGATCAAGAGATGTTCTATGTGTTATGTGGGAACTGTGGAATAAGGTAGATATTTGAAGGAAGTTTCTTTTGTTATCCACTTTTTAAGTGTCTATGAATTTAAACACACGAAGGAATTTATTTGGGGTATATACATTGGGTATCATTTGGAAATTTCTAATGGGTATTATAGATAATGGATATATAGGATATATAGTTTTGATTTATATATCTCTTTACCGTTCGAGTTCGAGCTGACATGTTTGCTGGATTCTTTGTACCTATTTTCTTAGGCTTGTTTTGCTATCACCTTTTATGTTTTGTTTTCGTACGGAGTGAAATGGTATCACTTTTTATGTTTTGTTTTCGTAC

mRNA sequence

AACAACGAGGCAAACAAACACATCACCACGTGGCAAAAGCCCCACGTGTCACATGCTAAACTCTGCCACTTCTTCCTATAAACCACACCTTACAAACCCCTTCAAATCAACACGTTCAGATTCACAAAAAAACACATACAGAGAAAGAGAGAACTACGGTCGGTGTCGGCTGTCGGTGTCGGTGTTCGAACTGAAACAATGGCAGTAAGCATTTCCTTAGCCAAAAATGTCATCTTCAACCTCTGGAAGGCCTTTCCCAATGCCTCTCCTTCTCAAACTCTCAGATATTCCTCCAAGATTTCAAGGGTCTCTTTCACTACTTCCGCCTCTAAGCAACCATGGAATGGACATGGCGCGGATGCGAACCGAGACCCGAGACCGGATTTAGCATACGAAGATGCGAAGGAAAGAGCCAAGGAAGGAGCCTATGACATGAAGGAGAAGGCGAAAGACTACGCCGAGGGGACGAAAGACATGGCGAAGGAAGAAACCAACAAGGCTGCGGAGACAGCGCGGGCTGCGAAGGAGAAGGTGAAAGACTACGCCGACGATGCGAGGGAGAAGGCTAAGGAAGGGACGAATAGGGTAGCGGAGACGGCGGAGGATGCGAGCGAGAGAGCGAAGGAAAGTGCGAAGGGAATGAAGGAGAAGACGGAGGAGATGGCGAAGGAGGGGACGAAGAAGGCGACGGAGACGGTGCAGAATATTGGGGAGAAGGCGAAGAGGACAGTGGAAGGGGCATGGGAGGCGGCTAAGGATACAACGCAGAAGATAAAGGAGAGGGTTGTAGGGTCAGATGAAGATGAGAGGGATGAAGATGTTGTGGATGTTAGGAGAAAAAGTGGGAGAAAGTTGGATGATTGAAATAATGGGTGGAGTTCCTTTTAGTTGCATCAATGAAATTTCATGTTGTTTTAGGCTTTTGATCAAGAGATGTTCTATGTGTTATGTGGGAACTGTGGAATAAGGTAGATATTTGAAGGAAGTTTCTTTTGTTATCCACTTTTTAAGTGTCTATGAATTTAAACACACGAAGGAATTTATTTGGGGTATATACATTGGGTATCATTTGGAAATTTCTAATGGGTATTATAGATAATGGATATATAGGATATATAGTTTTGATTTATATATCTCTTTACCGTTCGAGTTCGAGCTGACATGTTTGCTGGATTCTTTGTACCTATTTTCTTAGGCTTGTTTTGCTATCACCTTTTATGTTTTGTTTTCGTACGGAGTGAAATGGTATCACTTTTTATGTTTTGTTTTCGTAC

Coding sequence (CDS)

ATGGCAGTAAGCATTTCCTTAGCCAAAAATGTCATCTTCAACCTCTGGAAGGCCTTTCCCAATGCCTCTCCTTCTCAAACTCTCAGATATTCCTCCAAGATTTCAAGGGTCTCTTTCACTACTTCCGCCTCTAAGCAACCATGGAATGGACATGGCGCGGATGCGAACCGAGACCCGAGACCGGATTTAGCATACGAAGATGCGAAGGAAAGAGCCAAGGAAGGAGCCTATGACATGAAGGAGAAGGCGAAAGACTACGCCGAGGGGACGAAAGACATGGCGAAGGAAGAAACCAACAAGGCTGCGGAGACAGCGCGGGCTGCGAAGGAGAAGGTGAAAGACTACGCCGACGATGCGAGGGAGAAGGCTAAGGAAGGGACGAATAGGGTAGCGGAGACGGCGGAGGATGCGAGCGAGAGAGCGAAGGAAAGTGCGAAGGGAATGAAGGAGAAGACGGAGGAGATGGCGAAGGAGGGGACGAAGAAGGCGACGGAGACGGTGCAGAATATTGGGGAGAAGGCGAAGAGGACAGTGGAAGGGGCATGGGAGGCGGCTAAGGATACAACGCAGAAGATAAAGGAGAGGGTTGTAGGGTCAGATGAAGATGAGAGGGATGAAGATGTTGTGGATGTTAGGAGAAAAAGTGGGAGAAAGTTGGATGATTGA

Protein sequence

MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPRPDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAREKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEGAWEAAKDTTQKIKERVVGSDEDERDEDVVDVRRKSGRKLDD
Homology
BLAST of CmoCh18G003590 vs. ExPASy Swiss-Prot
Match: P23283 (Desiccation-related protein PCC3-06 OS=Craterostigma plantagineum OX=4153 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.5e-06
Identity = 54/210 (25.71%), Postives = 92/210 (43.81%), Query Frame = 0

Query: 8   AKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPRPDLA--Y 67
           A++ + ++ K+FP  +    L    K SRV FTT AS+       ++   D +   +   
Sbjct: 8   ARSTVLSISKSFPKNNSPTYLTLRPKFSRVRFTTVASQSQGRQQVSENAEDAKKKFSETT 67

Query: 68  EDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAREKAKE 127
           +  K +  E       KA   A  T D AKE  N A+  A   K+K ++ A++ REKA +
Sbjct: 68  DSLKHKTSEATDSASHKANGAARETNDKAKETYNAASGKAGELKDKTQEGAENVREKAMD 127

Query: 128 GTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEGAWEAA 187
             N   E   +A ER  +                       V N+G+  K  V GA E  
Sbjct: 128 AGNDAMEKTRNAGERVADG----------------------VSNVGQNVKENVMGAGEKV 187

Query: 188 KDTTQKIKERVVGSDEDERDEDVVDVRRKS 216
           K+  + +K+ V+G  E+ +++   + +++S
Sbjct: 188 KEFAEDVKDTVMGKSEEVKNQAEHETKKRS 195

BLAST of CmoCh18G003590 vs. ExPASy Swiss-Prot
Match: Q9LW12 (Late embryogenesis abundant protein 29 OS=Arabidopsis thaliana OX=3702 GN=LEA29 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.7e-05
Identity = 38/112 (33.93%), Postives = 67/112 (59.82%), Query Frame = 0

Query: 94  AKEETNKAAETARAAKEKVKDYADDAREKAKEGTNRVAETAEDASERAKESAKGMKEKTE 153
           + +++ KA ET   A+EK        R+KA+EG ++ ++TA+ A ++A E+A+  K+KT 
Sbjct: 3   SNQQSYKAGETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTS 62

Query: 154 EMAKEGTKKATETVQNIGEKAKRTVEGAWEAAKDTTQKIKERVVGSDEDERD 206
           + A+   +KA ET Q+  EK  +T + A + A +TTQ  KE+   + +  R+
Sbjct: 63  QTAQAAQQKAHETAQSAKEKTSQTAQTAQQKAHETTQAAKEKTSQAGDKARE 114

BLAST of CmoCh18G003590 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-05
Identity = 48/145 (33.10%), Postives = 76/145 (52.41%), Query Frame = 0

Query: 67  DAKERAKEGAYDMKEKAKDYAEGTKDMAKEET----NKAAETARAAKEKVKDYADDAREK 126
           +AK R +E    M    +D A+  K+ A++      +K ++TA+AAKEK +  A  A++K
Sbjct: 12  EAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEKTQQTAQAAKDK 71

Query: 127 AKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEGAW 186
            ++ T    E A+D + RAKE    M + T+E A+ G   +   +Q  GEKAK   +GA 
Sbjct: 72  TQQTTQATKEKAQDTTGRAKEKGSEMGQSTKETAQSGKDNSAGFLQQTGEKAKGMAQGAT 131

Query: 187 EAAKDTTQKIKERVVGSDEDERDED 208
           +A K T         G   D++D+D
Sbjct: 132 DAVKQT--------FGMTNDDQDKD 148

BLAST of CmoCh18G003590 vs. ExPASy Swiss-Prot
Match: O49816 (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.8e-05
Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 0

Query: 66  EDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAA--------ETARAAKEKVKDYAD 125
           ED  + AKE A    + AKD    T   AKE+T + A        +TA+AAK++ +  A 
Sbjct: 29  EDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEKTQQTAQAAKEKTQQTAQAAKDETQQTAQ 88

Query: 126 DAREKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRT 185
            A++K ++ T    E A+D + RA+E    M + T+E A+ G   +   +Q  GEK K  
Sbjct: 89  AAKDKTQQTTEATKEKAQDTTGRAREKGSEMGQSTKETAQSGKDNSAGFLQQTGEKVKGM 148

Query: 186 VEGAWEAAKDTTQKIKERVVGSDEDERDED 208
            +GA +A K T         G   D++D+D
Sbjct: 149 AQGATDAVKQT--------FGMANDDKDKD 170

BLAST of CmoCh18G003590 vs. ExPASy Swiss-Prot
Match: Q03968 (Late embryogenesis abundant protein, group 3 OS=Triticum aestivum OX=4565 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-04
Identity = 45/140 (32.14%), Postives = 73/140 (52.14%), Query Frame = 0

Query: 66  EDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAREKAKE 125
           E  K++A E     K+KA + AE TK  A E  +K A+TA+AAKEK  + A  A+E+A +
Sbjct: 50  EATKQKAAETTEAAKQKASETAEATKQKAAEAKDKTAQTAQAAKEKTYETAQSAKERAAQ 109

Query: 126 GTNRVAET----AEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEGA 185
           G ++ A T     E A ++A E+ +  ++K  E  +   +KA+ET Q   E A    +  
Sbjct: 110 GKDQTASTLGEKTEAAKQKAAETTEAARQKAAEATEAAKQKASETAQYTKESAVTGKDKT 169

Query: 186 WEAAKDTTQKIKERVVGSDE 202
               +   + +   VVG+ +
Sbjct: 170 GSVLQQAGETVVNAVVGAKD 189

BLAST of CmoCh18G003590 vs. ExPASy TrEMBL
Match: A0A6J1GR50 (late embryogenesis abundant protein, group 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456764 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 5.6e-108
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR 60
           MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR
Sbjct: 1   MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR 60

Query: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR 120
           PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR
Sbjct: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR 120

Query: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG 180
           EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG
Sbjct: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG 180

Query: 181 AWEAAKDTTQKIKERVVGSDEDERDEDVVDVRRKSGRKLDD 222
           AWEAAKDTTQKIKERVVGSDEDERDEDVVDVRRKSGRKLDD
Sbjct: 181 AWEAAKDTTQKIKERVVGSDEDERDEDVVDVRRKSGRKLDD 221

BLAST of CmoCh18G003590 vs. ExPASy TrEMBL
Match: A0A6J1K2X8 (late embryogenesis abundant protein, group 3-like OS=Cucurbita maxima OX=3661 GN=LOC111490179 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.5e-100
Identity = 211/221 (95.48%), Postives = 215/221 (97.29%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR 60
           MAVSISLAKNVIFNL KAFPNASPS TLRYS+KISRVSFTTSASKQPWNGHG DANRDPR
Sbjct: 1   MAVSISLAKNVIFNLCKAFPNASPSPTLRYSTKISRVSFTTSASKQPWNGHGVDANRDPR 60

Query: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR 120
           PDLAYEDAK RAKEGA DMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDA+
Sbjct: 61  PDLAYEDAKGRAKEGAQDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAK 120

Query: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG 180
           EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAK+TVEG
Sbjct: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKKTVEG 180

Query: 181 AWEAAKDTTQKIKERVVGSDEDERDEDVVDVRRKSGRKLDD 222
           AWEAAKDTTQKIKERVVGSDEDERDEDVVD+RR SGRKLDD
Sbjct: 181 AWEAAKDTTQKIKERVVGSDEDERDEDVVDLRR-SGRKLDD 220

BLAST of CmoCh18G003590 vs. ExPASy TrEMBL
Match: A0A6J1GR73 (late embryogenesis abundant protein, group 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456764 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.6e-94
Identity = 202/221 (91.40%), Postives = 202/221 (91.40%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR 60
           MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR
Sbjct: 1   MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR 60

Query: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR 120
           PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR
Sbjct: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR 120

Query: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG 180
           EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG
Sbjct: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG 180

Query: 181 AWEAAKDTTQKIKERVVGSDEDERDEDVVDVRRKSGRKLDD 222
           AWEA                   RDEDVVDVRRKSGRKLDD
Sbjct: 181 AWEA-------------------RDEDVVDVRRKSGRKLDD 202

BLAST of CmoCh18G003590 vs. ExPASy TrEMBL
Match: A0A0A0LRY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G074950 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.4e-66
Identity = 162/247 (65.59%), Postives = 193/247 (78.14%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLWK---AFPNASPSQTL-RYSSKISRVSFTTSASKQP-WNGHGADA 60
           MA+SISLAKNVIFNL K   AF N+SPS  L  +S+K+S +SF+TSASK P W+G+G DA
Sbjct: 1   MALSISLAKNVIFNLCKPKAAFANSSPSLFLNNHSTKLSSLSFSTSASKHPSWDGNGVDA 60

Query: 61  NRDPRPDLAYEDA-----------KERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAET 120
           NRD  PD AYEDA           KERAKEGA +MKEKAKDY++ TK+   E+TNKA+ET
Sbjct: 61  NRDSSPDYAYEDAKEQAKEEAKEMKERAKEGAKEMKEKAKDYSQETKEKVAEKTNKASET 120

Query: 121 ARAAKEKVKDYADDAREKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKAT 180
           A AAKEKVKDYA DA+EKAKEGTNR  ET E+A+ERAKE AKGMK+KT+EMAKEGT KAT
Sbjct: 121 ASAAKEKVKDYARDAKEKAKEGTNRATETVEEATERAKEGAKGMKDKTKEMAKEGTNKAT 180

Query: 181 ETVQNIGEKAKRTVEGAWEAAKDTTQKIKERVVGSDEDER----------DEDVVDVRRK 222
           ET+QNIGEKAK+TV+GAWEAAKDTT K+KE+V+G++ +E           DEDVVDVRRK
Sbjct: 181 ETMQNIGEKAKQTVQGAWEAAKDTTNKVKEKVMGTNNEEEDEEGRRGKVMDEDVVDVRRK 240

BLAST of CmoCh18G003590 vs. ExPASy TrEMBL
Match: A0A5D3DRU4 (ABA-inducible protein PHV A1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00910 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.2e-65
Identity = 158/235 (67.23%), Postives = 186/235 (79.15%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLWK---AFPNASPSQTLRYSSKISRVSFTTSASKQP-WNGHGADAN 60
           MAVSISLAKNVIFNL K   AF N+SPS  L  S+KIS +SF+TSASK P W+G+G D N
Sbjct: 1   MAVSISLAKNVIFNLCKPKAAFANSSPSLFLNKSTKISSLSFSTSASKHPSWDGNGVDPN 60

Query: 61  RDPRPDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYA 120
           RD R D AYEDAKERAKEGA +MKEKAK+  +  K+ A E+  +A+ETA AAKEKVKDYA
Sbjct: 61  RDSRADYAYEDAKERAKEGAKEMKEKAKENTQEAKEKAAEKAKRASETASAAKEKVKDYA 120

Query: 121 DDAREKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKR 180
            DA+EKAKEGT R  ET E+A+ERAKE AKGMKEKTEEMAKEGT KATETVQNIGEKAK+
Sbjct: 121 RDAKEKAKEGTYRATETVEEATERAKEGAKGMKEKTEEMAKEGTNKATETVQNIGEKAKQ 180

Query: 181 TVEGAWEAAKDTTQKIKERVVGSDEDER----------DEDVVDVRRKSGRKLDD 222
           TV+GAWEAAKDTT K+KE+V+G++ +E           DEDVV++RRK+G K D+
Sbjct: 181 TVQGAWEAAKDTTNKMKEKVMGTNNEEEVEEGRRGKVMDEDVVELRRKAGNKYDE 235

BLAST of CmoCh18G003590 vs. NCBI nr
Match: XP_022954521.1 (late embryogenesis abundant protein, group 3 isoform X1 [Cucurbita moschata])

HSP 1 Score: 400.2 bits (1027), Expect = 1.2e-107
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR 60
           MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR
Sbjct: 1   MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR 60

Query: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR 120
           PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR
Sbjct: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR 120

Query: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG 180
           EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG
Sbjct: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG 180

Query: 181 AWEAAKDTTQKIKERVVGSDEDERDEDVVDVRRKSGRKLDD 222
           AWEAAKDTTQKIKERVVGSDEDERDEDVVDVRRKSGRKLDD
Sbjct: 181 AWEAAKDTTQKIKERVVGSDEDERDEDVVDVRRKSGRKLDD 221

BLAST of CmoCh18G003590 vs. NCBI nr
Match: KAG7012442.1 (hypothetical protein SDJN02_25194, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 385.2 bits (988), Expect = 3.8e-103
Identity = 218/226 (96.46%), Postives = 218/226 (96.46%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR 60
           MAVSISLAKNVIFNL KAFPNASPS TLRYSSKISRVSFTTSASKQPWNGHG DANRDPR
Sbjct: 1   MAVSISLAKNVIFNLCKAFPNASPSPTLRYSSKISRVSFTTSASKQPWNGHGTDANRDPR 60

Query: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR 120
           PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR
Sbjct: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR 120

Query: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG 180
           EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG
Sbjct: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG 180

Query: 181 AWEAAKDTTQKIKERVVGS-----DEDERDEDVVDVRRKSGRKLDD 222
           AWEAAKDTTQKIKERVVGS     DEDERDEDVVDVRRKSGRKLDD
Sbjct: 181 AWEAAKDTTQKIKERVVGSDEDERDEDERDEDVVDVRRKSGRKLDD 226

BLAST of CmoCh18G003590 vs. NCBI nr
Match: KAG6573277.1 (hypothetical protein SDJN03_27164, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 383.3 bits (983), Expect = 1.5e-102
Identity = 217/226 (96.02%), Postives = 218/226 (96.46%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR 60
           MAVSISLAKNVIFNL KAFPNASPS TLRYSSKISRVSFTTSASKQPWNGHG DANRDPR
Sbjct: 1   MAVSISLAKNVIFNLCKAFPNASPSPTLRYSSKISRVSFTTSASKQPWNGHGTDANRDPR 60

Query: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR 120
           PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYA+DAR
Sbjct: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYANDAR 120

Query: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG 180
           EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG
Sbjct: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG 180

Query: 181 AWEAAKDTTQKIKERVVGS-----DEDERDEDVVDVRRKSGRKLDD 222
           AWEAAKDTTQKIKERVVGS     DEDERDEDVVDVRRKSGRKLDD
Sbjct: 181 AWEAAKDTTQKIKERVVGSDEDERDEDERDEDVVDVRRKSGRKLDD 226

BLAST of CmoCh18G003590 vs. NCBI nr
Match: XP_023542553.1 (late embryogenesis abundant protein, group 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.4 bits (973), Expect = 2.1e-101
Identity = 215/230 (93.48%), Postives = 218/230 (94.78%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR 60
           MAVSISLAKNVIFNL KAFPNASPS TLRYSSKISRVSFTTSASKQPWNGHGADANRDPR
Sbjct: 1   MAVSISLAKNVIFNLCKAFPNASPSPTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR 60

Query: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR 120
           PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR
Sbjct: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR 120

Query: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG 180
           EKAKEGTNRVAETAEDASERAKESAKGMKEKTE+MAKEGTKKATETVQNIGE+AK+TVEG
Sbjct: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEDMAKEGTKKATETVQNIGERAKKTVEG 180

Query: 181 AWEAAKDTTQKIKERVVGSDEDE---------RDEDVVDVRRKSGRKLDD 222
           AWEAAKDTTQKIKERVVGSDEDE          DEDVVDVRRKSGRKLDD
Sbjct: 181 AWEAAKDTTQKIKERVVGSDEDEGEEERGGKVMDEDVVDVRRKSGRKLDD 230

BLAST of CmoCh18G003590 vs. NCBI nr
Match: XP_022994469.1 (late embryogenesis abundant protein, group 3-like [Cucurbita maxima])

HSP 1 Score: 374.8 bits (961), Expect = 5.2e-100
Identity = 211/221 (95.48%), Postives = 215/221 (97.29%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLWKAFPNASPSQTLRYSSKISRVSFTTSASKQPWNGHGADANRDPR 60
           MAVSISLAKNVIFNL KAFPNASPS TLRYS+KISRVSFTTSASKQPWNGHG DANRDPR
Sbjct: 1   MAVSISLAKNVIFNLCKAFPNASPSPTLRYSTKISRVSFTTSASKQPWNGHGVDANRDPR 60

Query: 61  PDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAR 120
           PDLAYEDAK RAKEGA DMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDA+
Sbjct: 61  PDLAYEDAKGRAKEGAQDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDAK 120

Query: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEG 180
           EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAK+TVEG
Sbjct: 121 EKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKKTVEG 180

Query: 181 AWEAAKDTTQKIKERVVGSDEDERDEDVVDVRRKSGRKLDD 222
           AWEAAKDTTQKIKERVVGSDEDERDEDVVD+RR SGRKLDD
Sbjct: 181 AWEAAKDTTQKIKERVVGSDEDERDEDVVDLRR-SGRKLDD 220

BLAST of CmoCh18G003590 vs. TAIR 10
Match: AT5G44310.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 100.1 bits (248), Expect = 2.3e-21
Identity = 75/168 (44.64%), Postives = 105/168 (62.50%), Query Frame = 0

Query: 62  DLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDARE 121
           D AYE  KE+AK+ AYD+KEK KD+AE TK+   E  ++AA+ A   KEK K+YA+  ++
Sbjct: 128 DKAYE-TKEKAKDKAYDVKEKTKDFAEETKEKVNEGASRAADKAYDVKEKTKNYAEQTKD 187

Query: 122 KAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEGA 181
           K  EG +R A+ AE+  ++AK+ A+  KEK E+MA    +KA    Q+IGEK   TV+  
Sbjct: 188 KVNEGASRAADKAEETKDKAKDYAEDSKEKAEDMAHGFKEKA----QDIGEKTMDTVKDV 247

Query: 182 WEAAKDTTQKIKERVVGSDE------DERDEDVVDVRRKS--GRKLDD 222
           WE AK T QK+ E VVGS E      D+ D+ + D+ +K+   R  DD
Sbjct: 248 WETAKSTAQKVTEAVVGSGEEADKARDDVDKGLEDLSKKAKENRNKDD 290

BLAST of CmoCh18G003590 vs. TAIR 10
Match: AT5G44310.2 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 100.1 bits (248), Expect = 2.3e-21
Identity = 75/168 (44.64%), Postives = 105/168 (62.50%), Query Frame = 0

Query: 62  DLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYADDARE 121
           D AYE  KE+AK+ AYD+KEK KD+AE TK+   E  ++AA+ A   KEK K+YA+  ++
Sbjct: 164 DKAYE-TKEKAKDKAYDVKEKTKDFAEETKEKVNEGASRAADKAYDVKEKTKNYAEQTKD 223

Query: 122 KAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRTVEGA 181
           K  EG +R A+ AE+  ++AK+ A+  KEK E+MA    +KA    Q+IGEK   TV+  
Sbjct: 224 KVNEGASRAADKAEETKDKAKDYAEDSKEKAEDMAHGFKEKA----QDIGEKTMDTVKDV 283

Query: 182 WEAAKDTTQKIKERVVGSDE------DERDEDVVDVRRKS--GRKLDD 222
           WE AK T QK+ E VVGS E      D+ D+ + D+ +K+   R  DD
Sbjct: 284 WETAKSTAQKVTEAVVGSGEEADKARDDVDKGLEDLSKKAKENRNKDD 326

BLAST of CmoCh18G003590 vs. TAIR 10
Match: AT4G21020.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 98.6 bits (244), Expect = 6.7e-21
Identity = 94/254 (37.01%), Postives = 128/254 (50.39%), Query Frame = 0

Query: 4   SISLAKNVIFNLWKAFPNASPSQTLRYSS-KISRVSFTTSASKQPWNGHGADANRDPRPD 63
           ++ L +  +  L KAFP      TL  SS K+SR+ F TS S Q       D  RD R D
Sbjct: 3   AMQLTRTALVGLSKAFPGIKAPATLAASSRKVSRICFATSVS-QNEGRDPLDNARDSRAD 62

Query: 64  LAY--------------EDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAA 123
            AY              + AK++A EGA    +KA +  E  KD A E   KA +TA  A
Sbjct: 63  SAYGSKKWREDTGEYYAQAAKDKANEGASKAADKAYETKEQAKDKAYETKEKAKDTAYNA 122

Query: 124 KEKVKDYADDAREKAKEGTNRVAETAEDASER-----------AKESAKGMKEKTEEMAK 183
           KEK KDYA+  ++K  EG  + A+ AED  E+           AKE A+  KEK +E  +
Sbjct: 123 KEKAKDYAERTKDKVNEGAYKAADKAEDTKEKAKDYAEDTMDNAKEKARHAKEKVKEYGE 182

Query: 184 EGTKKA---TETV----QNIGEKAKRTVEGAWEAAKDTTQKIKERVVGSDED------ER 219
           +  +KA    ETV    + +GEK K TV+GAWE+ K+  Q + E VVG +ED      + 
Sbjct: 183 DTKEKAEGFKETVKGKAEELGEKTKETVKGAWESTKNAAQTVTEAVVGPEEDAEKARADM 242

BLAST of CmoCh18G003590 vs. TAIR 10
Match: AT3G15670.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 38/112 (33.93%), Postives = 67/112 (59.82%), Query Frame = 0

Query: 94  AKEETNKAAETARAAKEKVKDYADDAREKAKEGTNRVAETAEDASERAKESAKGMKEKTE 153
           + +++ KA ET   A+EK        R+KA+EG ++ ++TA+ A ++A E+A+  K+KT 
Sbjct: 3   SNQQSYKAGETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTS 62

Query: 154 EMAKEGTKKATETVQNIGEKAKRTVEGAWEAAKDTTQKIKERVVGSDEDERD 206
           + A+   +KA ET Q+  EK  +T + A + A +TTQ  KE+   + +  R+
Sbjct: 63  QTAQAAQQKAHETAQSAKEKTSQTAQTAQQKAHETTQAAKEKTSQAGDKARE 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P232834.5e-0625.71Desiccation-related protein PCC3-06 OS=Craterostigma plantagineum OX=4153 PE=2 S... [more]
Q9LW121.7e-0533.93Late embryogenesis abundant protein 29 OS=Arabidopsis thaliana OX=3702 GN=LEA29 ... [more]
O498172.9e-0533.10Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1[more]
O498163.8e-0532.67Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1[more]
Q039681.1e-0432.14Late embryogenesis abundant protein, group 3 OS=Triticum aestivum OX=4565 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A6J1GR505.6e-108100.00late embryogenesis abundant protein, group 3 isoform X1 OS=Cucurbita moschata OX... [more]
A0A6J1K2X82.5e-10095.48late embryogenesis abundant protein, group 3-like OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1GR731.6e-9491.40late embryogenesis abundant protein, group 3 isoform X2 OS=Cucurbita moschata OX... [more]
A0A0A0LRY01.4e-6665.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G074950 PE=4 SV=1[more]
A0A5D3DRU41.2e-6567.23ABA-inducible protein PHV A1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
XP_022954521.11.2e-107100.00late embryogenesis abundant protein, group 3 isoform X1 [Cucurbita moschata][more]
KAG7012442.13.8e-10396.46hypothetical protein SDJN02_25194, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6573277.11.5e-10296.02hypothetical protein SDJN03_27164, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023542553.12.1e-10193.48late embryogenesis abundant protein, group 3 [Cucurbita pepo subsp. pepo][more]
XP_022994469.15.2e-10095.48late embryogenesis abundant protein, group 3-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G44310.12.3e-2144.64Late embryogenesis abundant protein (LEA) family protein [more]
AT5G44310.22.3e-2144.64Late embryogenesis abundant protein (LEA) family protein [more]
AT4G21020.16.7e-2137.01Late embryogenesis abundant protein (LEA) family protein [more]
AT3G15670.11.2e-0633.93Late embryogenesis abundant protein (LEA) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 221..221
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
NoneNo IPR availableCOILSCoilCoilcoord: 91..125
NoneNo IPR availableGENE3D1.20.120.20Apolipoproteincoord: 62..201
e-value: 1.3E-8
score: 36.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..221
NoneNo IPR availablePANTHERPTHR47372DAUER UP-REGULATED-RELATEDcoord: 7..219
NoneNo IPR availablePANTHERPTHR47372:SF27SUBFAMILY NOT NAMEDcoord: 7..219
NoneNo IPR availableSUPERFAMILY58113Apolipoprotein A-Icoord: 66..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G003590.1CmoCh18G003590.1mRNA