CmoCh18G003440 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G003440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Cmo_Chr18: 2258000 .. 2260296 (-)
RNA-Seq Expression	CmoCh18G003440
Synteny	CmoCh18G003440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTGAAACAGTTCTCGTCGTCTTCTTCTTCTTCGTTTTCTTCTTTCGAAGGCGTGATCTCCGCGGATCTCATCTATGGATCAGTTCTTTTCCAAAGCTTTAACACGCTATGCCCTGGCTGGCAGGTTTTACCATACGAATCGATTGAAAAAGGCGACTCTGTACGCGAAAATTAGTCCTCTGGGCGATCCTAGCGTCAGTGTGGAGCCGGTGCTGGACGGCTGGGTTAAGGAGGGAAAGAAGGTCCGAATCGCTGAGCTTCAGAGAATCATTCATGACCTTCGCAAGCGTAAACGCTTCACACAAGCTCTTGAGGTTTGAGTTTTTCTTTCTTGAAATGTGGTATATTTTGGTTTGAGCTGTAGGATGTGTAGGAAGAAGTGAACTGTGAAAAAAGATGCATACAGTGAGAACTAAGTGTCTTTCGGATGAGCCTCCCTTTCAAAATGTGAATAGCTCAATCGCTAACTTCAAATCCTCAGGATTATGGAGAATGAGGTTATATTGACAGATATAGCTTGGGGAAATGGAAGGTACGCGGGTTTTCTATGCTAAAAAGTCAGAAAATACTTCTTTAGATTCTTTGATTCAATGACTTTGTTTGAGTAACTTCATTAGTTCACATAATATGGACCTTCAGCCATGGAGTTATGTTGTTTCTCCCTTATTTAATCTGGAGTATGATTTCACTTGTTAGGAATCTAAATCTGTGGATAATGATAGAATGACTATAGCATCATATGAGCTAGAAATGTGTGGATTTCAACAATTTATTGGGGGTGTTCTTTATAATTGATGATGGATGTAAATGCAGGTGTCCGAATGGATGAAGAAAACCGGTGTCTGCATATTTTCGCCAAGCGAACATGCGGTGCAATTGGACCTGATTGGCCGAGTTCGTGGATATCTTTCTGCCGAAAGCTATTTCAATCAGTTGAAGGAGCAAGACCAGACTGATAAGACATACGGTGCTCTCCTCAATTGCTACGTTCGGCAGCGGCAAGTTGAAAAATCTCTTTCCCATTTGCAAAAAATGAAAGAGATGGGCTTTGCAACTTCAGAGCTCACTTACAATGACATGATGTGCTTGTATACAAATGTTGGTCAGCATGACAAGGTCCCTGAGGTACTAGCAGAGATGAAAGAGAAAAATGTTTCTCCAGACAACTTCAGTTACAGAATCTGCATCAATTCATATGGTGCGAGACGGGATCTTGAGGGGATGGAGAATGTATTAAAGGAGATGGAATCTCAACCTCATATAGTCATGGATTGGAACACTTATGCAGTAGTAGCTAACTTCTTTATAAAAGCGGATCTCGCTGATAAGGCGGTTGATGCCTTGAAAAAAGCAGAAGAGAGACTGAAGAGTAAAGATAGAATTGGCCATAACCATCTAATCTCGCTATACGCAACGTTAGGAAACAAGGAGAAGGTGTTGAGATTGTGGAATCTGGATAAAACTGATACTACGAGACTCATCAATAGAGACTACATCACAATGCTTGAATCTCTGGTGAGACTGGGTGAACTTGAGGAAGCTGAAAAAGTGCTGAAAGAGTGGGAATCATCTGGGAATTGCTATGATTTTCGAGTTCCTAACACTGTCATTGTTGGGTATATTGACAAGGGAATGTGTGAGAGAGCCGAAGCCCTGCTCGAAGACTTGATGGAGAAGGGAAAGACTACCACACCAAACTGTTGGGGTGCTGTGGCTGTTCAATATATGGACAGGAGTGAGACTGAAAAATCTGTAGAGTGCATGAAGGCCGCCCTTACTCTAAATATGGATAAAGGATGGAAACCTAATCTACGTGTGATTACGGGCATATTGAATTGGCTTGGCGAAAACGCCAGCATTGAAGAAGTAGAAGCTTTTGTAGGCTCATTGAGGTCTGTGATTCCAGTGAACAGAGAGATGTATCATGCCTTGATGAAGGCTCATATAAGAGGTGGTAAAGAAGTACATGAGCTGTTAAATCAAATGAAGTCTGATAAAATAGATGAAGATGAAGAAACAAAGAAAATTCTTGGCACTGGGCAAGAAACAACTGAAGGAAGGTAAGAACAATTGCTGATTGTTTTCTTATTGAATCTTATTGTTGTTGTTGTCGATCTTAACACCTGTTGCTTGGGTTTCAATAATGCAAAATCTTATTTATCATCATGTTCTTCACATGAAAGGAGTAAAAGTAGCTGATGTTCACTTCCAATTTACTGATTGTATTTGGTGGTTTAATGAAGTGTTGGTGATTTGAGGGAAATGTGCTACATGCATAGATGATTCGTGAACAGGG

mRNA sequence

ACTTGAAACAGTTCTCGTCGTCTTCTTCTTCTTCGTTTTCTTCTTTCGAAGGCGTGATCTCCGCGGATCTCATCTATGGATCAGTTCTTTTCCAAAGCTTTAACACGCTATGCCCTGGCTGGCAGGTTTTACCATACGAATCGATTGAAAAAGGCGACTCTGTACGCGAAAATTAGTCCTCTGGGCGATCCTAGCGTCAGTGTGGAGCCGGTGCTGGACGGCTGGGTTAAGGAGGGAAAGAAGGTCCGAATCGCTGAGCTTCAGAGAATCATTCATGACCTTCGCAAGCGTAAACGCTTCACACAAGCTCTTGAGGTGTCCGAATGGATGAAGAAAACCGGTGTCTGCATATTTTCGCCAAGCGAACATGCGGTGCAATTGGACCTGATTGGCCGAGTTCGTGGATATCTTTCTGCCGAAAGCTATTTCAATCAGTTGAAGGAGCAAGACCAGACTGATAAGACATACGGTGCTCTCCTCAATTGCTACGTTCGGCAGCGGCAAGTTGAAAAATCTCTTTCCCATTTGCAAAAAATGAAAGAGATGGGCTTTGCAACTTCAGAGCTCACTTACAATGACATGATGTGCTTGTATACAAATGTTGGTCAGCATGACAAGGTCCCTGAGGTACTAGCAGAGATGAAAGAGAAAAATGTTTCTCCAGACAACTTCAGTTACAGAATCTGCATCAATTCATATGGTGCGAGACGGGATCTTGAGGGGATGGAGAATGTATTAAAGGAGATGGAATCTCAACCTCATATAGTCATGGATTGGAACACTTATGCAGTAGTAGCTAACTTCTTTATAAAAGCGGATCTCGCTGATAAGGCGGTTGATGCCTTGAAAAAAGCAGAAGAGAGACTGAAGAGTAAAGATAGAATTGGCCATAACCATCTAATCTCGCTATACGCAACGTTAGGAAACAAGGAGAAGGTGTTGAGATTGTGGAATCTGGATAAAACTGATACTACGAGACTCATCAATAGAGACTACATCACAATGCTTGAATCTCTGGTGAGACTGGGTGAACTTGAGGAAGCTGAAAAAGTGCTGAAAGAGTGGGAATCATCTGGGAATTGCTATGATTTTCGAGTTCCTAACACTGTCATTGTTGGGTATATTGACAAGGGAATGTGTGAGAGAGCCGAAGCCCTGCTCGAAGACTTGATGGAGAAGGGAAAGACTACCACACCAAACTGTTGGGGTGCTGTGGCTGTTCAATATATGGACAGGAGTGAGACTGAAAAATCTGTAGAGTGCATGAAGGCCGCCCTTACTCTAAATATGGATAAAGGATGGAAACCTAATCTACGTGTGATTACGGGCATATTGAATTGGCTTGGCGAAAACGCCAGCATTGAAGAAGTAGAAGCTTTTGTAGGCTCATTGAGGTCTGTGATTCCAGTGAACAGAGAGATGTATCATGCCTTGATGAAGGCTCATATAAGAGGTGGTAAAGAAGTACATGAGCTGTTAAATCAAATGAAGTCTGATAAAATAGATGAAGATGAAGAAACAAAGAAAATTCTTGGCACTGGGCAAGAAACAACTGAAGGAAGGTAAGAACAATTGCTGATTGTTTTCTTATTGAATCTTATTGTTGTTGTTGTCGATCTTAACACCTGTTGCTTGGGTTTCAATAATGCAAAATCTTATTTATCATCATGTTCTTCACATGAAAGGAGTAAAAGTAGCTGATGTTCACTTCCAATTTACTGATTGTATTTGGTGGTTTAATGAAGTGTTGGTGATTTGAGGGAAATGTGCTACATGCATAGATGATTCGTGAACAGGG

Coding sequence (CDS)

ATGGATCAGTTCTTTTCCAAAGCTTTAACACGCTATGCCCTGGCTGGCAGGTTTTACCATACGAATCGATTGAAAAAGGCGACTCTGTACGCGAAAATTAGTCCTCTGGGCGATCCTAGCGTCAGTGTGGAGCCGGTGCTGGACGGCTGGGTTAAGGAGGGAAAGAAGGTCCGAATCGCTGAGCTTCAGAGAATCATTCATGACCTTCGCAAGCGTAAACGCTTCACACAAGCTCTTGAGGTGTCCGAATGGATGAAGAAAACCGGTGTCTGCATATTTTCGCCAAGCGAACATGCGGTGCAATTGGACCTGATTGGCCGAGTTCGTGGATATCTTTCTGCCGAAAGCTATTTCAATCAGTTGAAGGAGCAAGACCAGACTGATAAGACATACGGTGCTCTCCTCAATTGCTACGTTCGGCAGCGGCAAGTTGAAAAATCTCTTTCCCATTTGCAAAAAATGAAAGAGATGGGCTTTGCAACTTCAGAGCTCACTTACAATGACATGATGTGCTTGTATACAAATGTTGGTCAGCATGACAAGGTCCCTGAGGTACTAGCAGAGATGAAAGAGAAAAATGTTTCTCCAGACAACTTCAGTTACAGAATCTGCATCAATTCATATGGTGCGAGACGGGATCTTGAGGGGATGGAGAATGTATTAAAGGAGATGGAATCTCAACCTCATATAGTCATGGATTGGAACACTTATGCAGTAGTAGCTAACTTCTTTATAAAAGCGGATCTCGCTGATAAGGCGGTTGATGCCTTGAAAAAAGCAGAAGAGAGACTGAAGAGTAAAGATAGAATTGGCCATAACCATCTAATCTCGCTATACGCAACGTTAGGAAACAAGGAGAAGGTGTTGAGATTGTGGAATCTGGATAAAACTGATACTACGAGACTCATCAATAGAGACTACATCACAATGCTTGAATCTCTGGTGAGACTGGGTGAACTTGAGGAAGCTGAAAAAGTGCTGAAAGAGTGGGAATCATCTGGGAATTGCTATGATTTTCGAGTTCCTAACACTGTCATTGTTGGGTATATTGACAAGGGAATGTGTGAGAGAGCCGAAGCCCTGCTCGAAGACTTGATGGAGAAGGGAAAGACTACCACACCAAACTGTTGGGGTGCTGTGGCTGTTCAATATATGGACAGGAGTGAGACTGAAAAATCTGTAGAGTGCATGAAGGCCGCCCTTACTCTAAATATGGATAAAGGATGGAAACCTAATCTACGTGTGATTACGGGCATATTGAATTGGCTTGGCGAAAACGCCAGCATTGAAGAAGTAGAAGCTTTTGTAGGCTCATTGAGGTCTGTGATTCCAGTGAACAGAGAGATGTATCATGCCTTGATGAAGGCTCATATAAGAGGTGGTAAAGAAGTACATGAGCTGTTAAATCAAATGAAGTCTGATAAAATAGATGAAGATGAAGAAACAAAGAAAATTCTTGGCACTGGGCAAGAAACAACTGAAGGAAGGTAA

Protein sequence

MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIAELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTTRLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGILNWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEETKKILGTGQETTEGR

Homology

[Close]

BLAST of CmoCh18G003440 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 3.4e-171
Identity = 292/477 (61.22%), Postives = 371/477 (77.78%), Query Frame = 0


Query: 14  LAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIAELQRIIHDLRKRK 73
           +A R+Y+TNR+KK TLY+KISPLGDP  SV P L  WV+ GKKV +AEL RI+HDLR+RK
Sbjct: 12  IASRYYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRK 71

Query: 74  RFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGA 133
           RF  ALEVS+WM +TGVC+FSP+EHAV LDLIGRV G+++AE YF  LKEQ + DKTYGA
Sbjct: 72  RFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGA 131

Query: 134 LLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPEVLAEMKEKN 193
           LLNCYVRQ+ VEKSL H +KMKEMGF TS LTYN++MCLYTN+GQH+KVP+VL EMKE+N
Sbjct: 132 LLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEEN 191

Query: 194 VSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKADLADKA 253
           V+PDN+SYRICIN++GA  DLE +   L++ME +  I MDWNTYAV A F+I     D+A
Sbjct: 192 VAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRA 251

Query: 254 VDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTTRLINRDYITMLES 313
           V+ LK +E RL+ KD  G+NHLI+LYA LG K +VLRLW+L+K    R IN+DY+T+L+S
Sbjct: 252 VELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQS 311

Query: 314 LVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKTTT 373
           LV++  L EAE+VL EW+SSGNCYDFRVPNTVI GYI K M E+AEA+LEDL  +GK TT
Sbjct: 312 LVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATT 371

Query: 374 PNCWGAVAVQYMDRSETEKSVECMKAALTLNM-DKGWKPNLRVITGILNWLGENASIEEV 433
           P  W  VA  Y ++   E + +CMK AL + +  + W+P L ++T +L+W+G+  S++EV
Sbjct: 372 PESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEV 431

Query: 434 EAFVGSLRSVIPVNREMYHALMKAHIR-GGKEVHELLNQMKSDKIDEDEETKKILGT 489
           E+FV SLR+ I VN++MYHAL+KA IR GG+ +  LL +MK DKI+ DEET  IL T
Sbjct: 432 ESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILST 488

[Close]

BLAST of CmoCh18G003440 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 292.7 bits (748), Expect = 7.6e-78
Identity = 154/427 (36.07%), Postives = 253/427 (59.25%), Query Frame = 0


Query: 29  LYAKISPLGDPSVSVEPVLDGWVKEGKKVRIAELQRIIHDLRKRKRFTQALEVSEWMKKT 88
           +Y KIS +  P +    VL+ W K G+K+   EL R++ +LRK KR  QALEV +WM   
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 89  GVCI-FSPSEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYVRQRQVEKS 148
           G     S S+ A+QLDLIG+VRG   AE +F QL E  +  + YG+LLN YVR +  EK+
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 149 LSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPEVLAEMKEKNVSPDNFSYRICINS 208
            + L  M++ G+A   L +N MM LY N+ ++DKV  ++ EMK+K++  D +SY I ++S
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248

Query: 209 YGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKADLADKAVDALKKAEERLKSK 268
            G+   +E ME V ++M+S   I  +W T++ +A  +IK    +KA DAL+K E R+  +
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308

Query: 269 DRIGHNHLISLYATLGNKEKVLRLWNLDKTDTTRLINRDYITMLESLVRLGELEEAEKVL 328
           +RI +++L+SLY +LGNK+++ R+W++ K+    + N  Y  ++ SLVR+G++E AEKV 
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368

Query: 329 KEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKTTTPNCWGAVAVQYMDR 388
           +EW    + YD R+PN ++  Y+     E AE L + ++E G   + + W  +AV +  +
Sbjct: 369 EEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRK 428

Query: 389 SETEKSVECMKAALTLNMDKGWKPNLRVITGILNWLGENASIEEVEAFVGSLRSVIPVNR 448
               +++ C++ A +      W+P + +++G      E + +   EA +  LR    +  
Sbjct: 429 RCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLED 488

Query: 449 EMYHALM 455
           + Y AL+
Sbjct: 489 KSYLALI 495

[Close]

BLAST of CmoCh18G003440 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.2e-75
Identity = 147/404 (36.39%), Postives = 244/404 (60.40%), Query Frame = 0


Query: 28  TLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIAELQRIIHDLRKRKRFTQALEVSEWMKK 87
           TL  +++  GDPS S+  VLDGW+ +G  V+ +EL  II  LRK  RF+ AL++S+WM +
Sbjct: 39  TLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSE 98

Query: 88  TGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYVRQRQVEKS 147
             V   S  + A++LDLI +V G   AE +F  +  + +    YGALLNCY  ++ + K+
Sbjct: 99  HRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKA 158

Query: 148 LSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPEVLAEMKEKNVSPDNFSYRICINS 207
               Q+MKE+GF    L YN M+ LY   G++  V ++L EM+++ V PD F+    +++
Sbjct: 159 EQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHA 218

Query: 208 YGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKADLADKAVDALKKAEERLKS- 267
           Y    D+EGME  L   E+   + +DW TYA  AN +IKA L +KA++ L+K+E+ + + 
Sbjct: 219 YSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQ 278

Query: 268 KDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTTRLINRDYITMLESLVRLGELEEAEKV 327
           K +  +  L+S Y   G KE+V RLW+L K +     N  YI+++ +L+++ ++EE EK+
Sbjct: 279 KRKHAYEVLMSFYGAAGKKEEVYRLWSLYK-ELDGFYNTGYISVISALLKMDDIEEVEKI 338

Query: 328 LKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKTTTPNCWGAVAVQYMD 387
           ++EWE+  + +D R+P+ +I GY  KGM E+AE ++  L++K +    + W  +A+ Y  
Sbjct: 339 MEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKM 398

Query: 388 RSETEKSVECMKAALTLNMDKGWKPNLRVITGILNWLGENASIE 431
             + EK+VE  K A+ ++   GW+P+  V+   +++L     +E
Sbjct: 399 AGKMEKAVEKWKRAIEVS-KPGWRPHQVVLMSCVDYLEGQRDME 440

[Close]

BLAST of CmoCh18G003440 vs. ExPASy Swiss-Prot
Match: Q93WC5 (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01990 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 7.4e-73
Identity = 152/467 (32.55%), Postives = 265/467 (56.75%), Query Frame = 0


Query: 21  TNRLKKATLYAKISPLGD-PSVSVEPVLDGWVKEGKKVRIAELQRIIHDLRKRKRFTQAL 80
           T   K  ++Y K+S LG      +E  L+ +V EG  V+  +L R   DLRK ++  +AL
Sbjct: 33  TKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRAL 92

Query: 81  EVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYV 140
           E+ EWM++  +  F+ S+HA++L+LI + +G  +AE+YFN L +  +   TYG+LLNCY 
Sbjct: 93  EIFEWMERKEIA-FTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYC 152

Query: 141 RQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPEVLAEMKEKNVSPDNF 200
            +++  K+ +H + M ++   ++ L +N++M +Y  +GQ +KVP ++  MKEK+++P + 
Sbjct: 153 VEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDI 212

Query: 201 SYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKADLADKAVDALKK 260
           +Y + I S G+ +DL+G+E VL EM+++   +  WNT+A +A  +IK  L  KA +ALK 
Sbjct: 213 TYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKS 272

Query: 261 AEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTTRLINRDYITMLESLVRLGE 320
            E  +    R  ++ LI+LY  + N  +V R+W+L K     + N  Y+TML +L +L +
Sbjct: 273 LENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDD 332

Query: 321 LEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKTTTPNCWGA 380
           ++  +KV  EWES+   YD R+ N  I  Y+ + M E AEA+    M+K K         
Sbjct: 333 IDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQL 392

Query: 381 VAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGILNWLGENASIEEVEAFVGSL 440
           + +  +   + + +++  +AA+ L+ DK W  +  +I+       E   ++  E F  +L
Sbjct: 393 LMMHLLKNDQADLALKHFEAAV-LDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTL 452

Query: 441 RSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEETKKIL 487
               P++ E Y  LMK ++  GK   ++  +++   I  DEE + +L
Sbjct: 453 TKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLL 497

[Close]

BLAST of CmoCh18G003440 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.8e-69
Identity = 145/438 (33.11%), Postives = 251/438 (57.31%), Query Frame = 0


Query: 50  WVKEGKKVRIAELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVR 109
           W +EG  VR  EL RI+ +LRK KR+  ALE+ EWM           ++AV LDLI ++R
Sbjct: 84  WKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIR 143

Query: 110 GYLSAESYFNQLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDM 169
           G  SAE +F  + +Q +      +LL+ YV+ +  +K+ +  +KM E GF  S L YN M
Sbjct: 144 GLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHM 203

Query: 170 MCLYTNVGQHDKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENV-LKEMESQP 229
           + +Y + GQ +KVP ++ E+K +  SPD  +Y + + ++ +  D+EG E V LK  E + 
Sbjct: 204 LSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEK- 263

Query: 230 HIVMDWNTYAVVANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKV 289
            +  DW TY+V+ N + K D  +KA  ALK+ E+ +  K+R+ +  LISL+A LG+K+ V
Sbjct: 264 -LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGV 323

Query: 290 LRLWNLDKTDTTRLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVG 349
              W   K+   ++ + +Y++M+ ++V+LGE E+A+ +  EWES     D R+PN ++  
Sbjct: 324 NLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAE 383

Query: 350 YIDKGMCERAEALLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKG 409
           Y+++      E   E ++EKG   + + W  +   Y+ R + EK ++C   A  ++  K 
Sbjct: 384 YMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKA--IDSVKK 443

Query: 410 WKPNLRVITGILNWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELL 469
           W  N+R++ G    L E  +++  E  +  L+    VN ++Y++L++ + + G+    + 
Sbjct: 444 WTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMALIVE 503

Query: 470 NQMKSDKIDEDEETKKIL 487
            +M  D ++ DEETK+++
Sbjct: 504 ERMAKDNVELDEETKELI 516

[Close]

BLAST of CmoCh18G003440 vs. ExPASy TrEMBL
Match: A0A6J1GTN5 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457015 PE=4 SV=1)

HSP 1 Score: 994.2 bits (2569), Expect = 2.0e-286
Identity = 495/495 (100.00%), Postives = 495/495 (100.00%), Query Frame = 0


Query: 1   MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA 60
           MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA
Sbjct: 1   MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA 60

Query: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120
           ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ
Sbjct: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120

Query: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD 180
           LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD
Sbjct: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD 180

Query: 181 KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240
           KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV
Sbjct: 181 KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240

Query: 241 ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT 300
           ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT
Sbjct: 241 ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT 300

Query: 301 RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360
           RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA
Sbjct: 301 RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360

Query: 361 LLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420
           LLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL
Sbjct: 361 LLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420

Query: 421 NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDE 480
           NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDE
Sbjct: 421 NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDE 480

Query: 481 ETKKILGTGQETTEG 496
           ETKKILGTGQETTEG
Sbjct: 481 ETKKILGTGQETTEG 495

[Close]

BLAST of CmoCh18G003440 vs. ExPASy TrEMBL
Match: A0A6J1K124 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490120 PE=4 SV=1)

HSP 1 Score: 978.4 bits (2528), Expect = 1.1e-281
Identity = 487/496 (98.19%), Postives = 488/496 (98.39%), Query Frame = 0


Query: 1   MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA 60
           MDQFFSKALTRYALA RFYHTNRLKKATLYAKISPLGDP+VSVEP LDGWVKEGKKVRIA
Sbjct: 1   MDQFFSKALTRYALADRFYHTNRLKKATLYAKISPLGDPNVSVEPELDGWVKEGKKVRIA 60

Query: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120
           ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ
Sbjct: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120

Query: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD 180
           LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD
Sbjct: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD 180

Query: 181 KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240
           KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV
Sbjct: 181 KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240

Query: 241 ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT 300
           ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLY TLGNKEKVLRLWNLDKTDTT
Sbjct: 241 ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYTTLGNKEKVLRLWNLDKTDTT 300

Query: 301 RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360
           R INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA
Sbjct: 301 RFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360

Query: 361 LLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420
           LLEDLMEKGKTTTPN WGAVAVQYMDR ETEKSVECMKAALTLNMDKGWKPNLRVITGIL
Sbjct: 361 LLEDLMEKGKTTTPNSWGAVAVQYMDRGETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420

Query: 421 NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDE 480
           NWLGENASIEEVEAFVGSLRS IPVNREMYHALMK HIRGGKEVHELLNQMKSDKIDEDE
Sbjct: 421 NWLGENASIEEVEAFVGSLRSAIPVNREMYHALMKVHIRGGKEVHELLNQMKSDKIDEDE 480

Query: 481 ETKKILGTGQETTEGR 497
           ETKKILGTGQETTEGR
Sbjct: 481 ETKKILGTGQETTEGR 496

[Close]

BLAST of CmoCh18G003440 vs. ExPASy TrEMBL
Match: A0A6J1CGU2 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111010721 PE=4 SV=1)

HSP 1 Score: 898.3 bits (2320), Expect = 1.5e-257
Identity = 441/497 (88.73%), Postives = 473/497 (95.17%), Query Frame = 0


Query: 1   MDQ-FFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRI 60
           MDQ  FSKALTRYA+AGR YHTNR+KKATLYAKISPLGDPS+SV P LDGWV+EGKK+R+
Sbjct: 10  MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 69

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120
           AELQRIIHDLRKRKRFTQALEVSEWMK++GVCIFSPSEHAVQLDLIGRVRGYLSAESYF+
Sbjct: 70  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 129

Query: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180
           QLK+QD+T KTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH
Sbjct: 130 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 189

Query: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240
           DKVP+VLAEMKE  VSPDNFSYRICINSYG R DLEGME+VLKEMESQPHIVMDWNTYAV
Sbjct: 190 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 249

Query: 241 VANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDT 300
           VANFFIK  L DKAVDAL+K+EERL SKDRIGHNHLISLYATLGNKE+VLRLW LDK+D+
Sbjct: 250 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 309

Query: 301 TRLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 310 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 369

Query: 361 ALLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGI 420
           ALLEDLM++GK TTPN WGAVAVQY+DR ETEK+VECMK AL+L++DKGWKPNLRVITGI
Sbjct: 370 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 429

Query: 421 LNWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDED 480
           LNW+G+N+S EEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVH LL+QMKSD+IDED
Sbjct: 430 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 489

Query: 481 EETKKILGTGQETTEGR 497
           EETKKILGT QE TEG+
Sbjct: 490 EETKKILGTWQEATEGK 506

[Close]

BLAST of CmoCh18G003440 vs. ExPASy TrEMBL
Match: A0A5A7UM45 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00740 PE=4 SV=1)

HSP 1 Score: 855.9 bits (2210), Expect = 8.3e-245
Identity = 420/497 (84.51%), Postives = 459/497 (92.35%), Query Frame = 0


Query: 1   MDQ-FFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRI 60
           MDQ  FSKALT YALA R YHT RLKKATLYAKISPLGDPS+SVE  LDGWV+EGKKVR+
Sbjct: 1   MDQKLFSKALTHYALASRSYHTTRLKKATLYAKISPLGDPSISVESELDGWVQEGKKVRV 60

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120
           AELQRII D RKR RF+QAL+VSEWMKK+G CIFSP+EHAVQLDLIGRVRGYLSAE YFN
Sbjct: 61  AELQRIIRDFRKRSRFSQALQVSEWMKKSGACIFSPTEHAVQLDLIGRVRGYLSAEKYFN 120

Query: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180
           QLKEQDQ  KTYGALLNCYVRQ+QV+KSLSHLQKMKE+GFATSELTYND+MCLYT VGQH
Sbjct: 121 QLKEQDQNIKTYGALLNCYVRQQQVDKSLSHLQKMKELGFATSELTYNDIMCLYTRVGQH 180

Query: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240
           +KVPEVLAEMK  NVSPDNFSYRICINSYGAR+DLEGMENVLKEMESQPHIVMDWNTYAV
Sbjct: 181 EKVPEVLAEMKGNNVSPDNFSYRICINSYGARKDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDT 300
           VANFFIKA L DKAVDAL+K+EE+LKSKDRIGHNHLISLYATLGNKEKVLR+WNLDKT T
Sbjct: 241 VANFFIKAGLTDKAVDALRKSEEKLKSKDRIGHNHLISLYATLGNKEKVLRVWNLDKTAT 300

Query: 301 TRLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR+INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRIINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 ALLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGI 420
            LLE+L +  K TTPN WGAVAV+Y+DR ETEK++ECMKAAL++N DKGWKPN RVITG+
Sbjct: 361 TLLENLNQNEKATTPNSWGAVAVKYLDRGETEKALECMKAALSVNTDKGWKPNPRVITGV 420

Query: 421 LNWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDED 480
           LNWLG+   +EEVEAFV +LRSVIPVNREMYHAL+K +IR  KEV+E+LN+MK+DKI+ED
Sbjct: 421 LNWLGDKGIVEEVEAFVSALRSVIPVNREMYHALLKVYIRADKEVNEVLNKMKADKINED 480

Query: 481 EETKKILGTGQETTEGR 497
           EETKKILGT +ETTEG+
Sbjct: 481 EETKKILGTWEETTEGK 497

[Close]

BLAST of CmoCh18G003440 vs. ExPASy TrEMBL
Match: A0A1S3B5N2 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486296 PE=4 SV=1)

HSP 1 Score: 855.9 bits (2210), Expect = 8.3e-245
Identity = 420/497 (84.51%), Postives = 459/497 (92.35%), Query Frame = 0


Query: 1   MDQ-FFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRI 60
           MDQ  FSKALT YALA R YHT RLKKATLYAKISPLGDPS+SVE  LDGWV+EGKKVR+
Sbjct: 1   MDQKLFSKALTHYALASRSYHTTRLKKATLYAKISPLGDPSISVESELDGWVQEGKKVRV 60

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120
           AELQRII D RKR RF+QAL+VSEWMKK+G CIFSP+EHAVQLDLIGRVRGYLSAE YFN
Sbjct: 61  AELQRIIRDFRKRSRFSQALQVSEWMKKSGACIFSPTEHAVQLDLIGRVRGYLSAEKYFN 120

Query: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180
           QLKEQDQ  KTYGALLNCYVRQ+QV+KSLSHLQKMKE+GFATSELTYND+MCLYT VGQH
Sbjct: 121 QLKEQDQNIKTYGALLNCYVRQQQVDKSLSHLQKMKELGFATSELTYNDIMCLYTRVGQH 180

Query: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240
           +KVPEVLAEMK  NVSPDNFSYRICINSYGAR+DLEGMENVLKEMESQPHIVMDWNTYAV
Sbjct: 181 EKVPEVLAEMKGNNVSPDNFSYRICINSYGARKDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDT 300
           VANFFIKA L DKAVDAL+K+EE+LKSKDRIGHNHLISLYATLGNKEKVLR+WNLDKT T
Sbjct: 241 VANFFIKAGLTDKAVDALRKSEEKLKSKDRIGHNHLISLYATLGNKEKVLRVWNLDKTAT 300

Query: 301 TRLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR+INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRIINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 ALLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGI 420
            LLE+L +  K TTPN WGAVAV+Y+DR ETEK++ECMKAAL++N DKGWKPN RVITG+
Sbjct: 361 TLLENLNQNEKATTPNSWGAVAVKYLDRGETEKALECMKAALSVNTDKGWKPNPRVITGV 420

Query: 421 LNWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDED 480
           LNWLG+   +EEVEAFV +LRSVIPVNREMYHAL+K +IR  KEV+E+LN+MK+DKI+ED
Sbjct: 421 LNWLGDKGIVEEVEAFVSALRSVIPVNREMYHALLKVYIRADKEVNEVLNKMKADKINED 480

Query: 481 EETKKILGTGQETTEGR 497
           EETKKILGT +ETTEG+
Sbjct: 481 EETKKILGTWEETTEGK 497

[Close]

BLAST of CmoCh18G003440 vs. NCBI nr
Match: XP_022954890.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 994.2 bits (2569), Expect = 4.0e-286
Identity = 495/495 (100.00%), Postives = 495/495 (100.00%), Query Frame = 0


Query: 1   MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA 60
           MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA
Sbjct: 1   MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA 60

Query: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120
           ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ
Sbjct: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120

Query: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD 180
           LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD
Sbjct: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD 180

Query: 181 KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240
           KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV
Sbjct: 181 KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240

Query: 241 ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT 300
           ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT
Sbjct: 241 ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT 300

Query: 301 RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360
           RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA
Sbjct: 301 RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360

Query: 361 LLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420
           LLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL
Sbjct: 361 LLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420

Query: 421 NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDE 480
           NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDE
Sbjct: 421 NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDE 480

Query: 481 ETKKILGTGQETTEG 496
           ETKKILGTGQETTEG
Sbjct: 481 ETKKILGTGQETTEG 495

[Close]

BLAST of CmoCh18G003440 vs. NCBI nr
Match: KAG6573262.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 993.4 bits (2567), Expect = 6.9e-286
Identity = 495/496 (99.80%), Postives = 495/496 (99.80%), Query Frame = 0


Query: 1   MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA 60
           MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA
Sbjct: 1   MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA 60

Query: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120
           ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ
Sbjct: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120

Query: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD 180
           LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD
Sbjct: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD 180

Query: 181 KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240
           KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV
Sbjct: 181 KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240

Query: 241 ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT 300
           ANFFIKADLADKAVDALKKAE RLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT
Sbjct: 241 ANFFIKADLADKAVDALKKAEVRLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT 300

Query: 301 RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360
           RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA
Sbjct: 301 RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360

Query: 361 LLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420
           LLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL
Sbjct: 361 LLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420

Query: 421 NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDE 480
           NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDE
Sbjct: 421 NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDE 480

Query: 481 ETKKILGTGQETTEGR 497
           ETKKILGTGQETTEGR
Sbjct: 481 ETKKILGTGQETTEGR 496

[Close]

BLAST of CmoCh18G003440 vs. NCBI nr
Match: KAG7012430.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 985.7 bits (2547), Expect = 1.4e-283
Identity = 491/494 (99.39%), Postives = 492/494 (99.60%), Query Frame = 0


Query: 1   MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA 60
           MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA
Sbjct: 1   MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA 60

Query: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120
           ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ
Sbjct: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120

Query: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD 180
           LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD
Sbjct: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD 180

Query: 181 KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240
           KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV
Sbjct: 181 KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240

Query: 241 ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT 300
           ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT
Sbjct: 241 ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT 300

Query: 301 RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360
           RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA
Sbjct: 301 RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360

Query: 361 LLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420
           LLEDLMEKGKTTTPN WGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL
Sbjct: 361 LLEDLMEKGKTTTPNSWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420

Query: 421 NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDE 480
           NWLGEN SIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDK+DEDE
Sbjct: 421 NWLGENGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKLDEDE 480

Query: 481 ETKKILGTGQETTE 495
           ETKKILGTGQETTE
Sbjct: 481 ETKKILGTGQETTE 494

[Close]

BLAST of CmoCh18G003440 vs. NCBI nr
Match: XP_022994385.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 978.4 bits (2528), Expect = 2.3e-281
Identity = 487/496 (98.19%), Postives = 488/496 (98.39%), Query Frame = 0


Query: 1   MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA 60
           MDQFFSKALTRYALA RFYHTNRLKKATLYAKISPLGDP+VSVEP LDGWVKEGKKVRIA
Sbjct: 1   MDQFFSKALTRYALADRFYHTNRLKKATLYAKISPLGDPNVSVEPELDGWVKEGKKVRIA 60

Query: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120
           ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ
Sbjct: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120

Query: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD 180
           LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD
Sbjct: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD 180

Query: 181 KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240
           KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV
Sbjct: 181 KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240

Query: 241 ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT 300
           ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLY TLGNKEKVLRLWNLDKTDTT
Sbjct: 241 ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYTTLGNKEKVLRLWNLDKTDTT 300

Query: 301 RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360
           R INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA
Sbjct: 301 RFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360

Query: 361 LLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420
           LLEDLMEKGKTTTPN WGAVAVQYMDR ETEKSVECMKAALTLNMDKGWKPNLRVITGIL
Sbjct: 361 LLEDLMEKGKTTTPNSWGAVAVQYMDRGETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420

Query: 421 NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDE 480
           NWLGENASIEEVEAFVGSLRS IPVNREMYHALMK HIRGGKEVHELLNQMKSDKIDEDE
Sbjct: 421 NWLGENASIEEVEAFVGSLRSAIPVNREMYHALMKVHIRGGKEVHELLNQMKSDKIDEDE 480

Query: 481 ETKKILGTGQETTEGR 497
           ETKKILGTGQETTEGR
Sbjct: 481 ETKKILGTGQETTEGR 496

[Close]

BLAST of CmoCh18G003440 vs. NCBI nr
Match: XP_023542644.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 973.8 bits (2516), Expect = 5.7e-280
Identity = 483/494 (97.77%), Postives = 488/494 (98.79%), Query Frame = 0


Query: 1   MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIA 60
           MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEP LDGWVKEGKKVRIA
Sbjct: 1   MDQFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPELDGWVKEGKKVRIA 60

Query: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120
           ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ
Sbjct: 61  ELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQ 120

Query: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHD 180
           LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELT+NDMMCLYTNVGQHD
Sbjct: 121 LKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTFNDMMCLYTNVGQHD 180

Query: 181 KVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240
           KVPEVLAEMKEKN+SPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV
Sbjct: 181 KVPEVLAEMKEKNISPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVV 240

Query: 241 ANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTT 300
           ANFFIKADL +KAVDAL+KAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTD T
Sbjct: 241 ANFFIKADLTEKAVDALRKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDAT 300

Query: 301 RLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360
           R INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA
Sbjct: 301 RFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEA 360

Query: 361 LLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420
           LLEDLMEKGKTTTPN WGAVAVQYMDR ETEKSVECMKAALTLNMDKGWKPNLRVITGIL
Sbjct: 361 LLEDLMEKGKTTTPNSWGAVAVQYMDRGETEKSVECMKAALTLNMDKGWKPNLRVITGIL 420

Query: 421 NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDE 480
           NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDK+DEDE
Sbjct: 421 NWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKLDEDE 480

Query: 481 ETKKILGTGQETTE 495
           ETKKILGTGQETTE
Sbjct: 481 ETKKILGTGQETTE 494

[Close]

BLAST of CmoCh18G003440 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 602.8 bits (1553), Expect = 2.4e-172
Identity = 292/477 (61.22%), Postives = 371/477 (77.78%), Query Frame = 0


Query: 14  LAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIAELQRIIHDLRKRK 73
           +A R+Y+TNR+KK TLY+KISPLGDP  SV P L  WV+ GKKV +AEL RI+HDLR+RK
Sbjct: 12  IASRYYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRK 71

Query: 74  RFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGA 133
           RF  ALEVS+WM +TGVC+FSP+EHAV LDLIGRV G+++AE YF  LKEQ + DKTYGA
Sbjct: 72  RFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGA 131

Query: 134 LLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPEVLAEMKEKN 193
           LLNCYVRQ+ VEKSL H +KMKEMGF TS LTYN++MCLYTN+GQH+KVP+VL EMKE+N
Sbjct: 132 LLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEEN 191

Query: 194 VSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKADLADKA 253
           V+PDN+SYRICIN++GA  DLE +   L++ME +  I MDWNTYAV A F+I     D+A
Sbjct: 192 VAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRA 251

Query: 254 VDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTTRLINRDYITMLES 313
           V+ LK +E RL+ KD  G+NHLI+LYA LG K +VLRLW+L+K    R IN+DY+T+L+S
Sbjct: 252 VELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQS 311

Query: 314 LVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKTTT 373
           LV++  L EAE+VL EW+SSGNCYDFRVPNTVI GYI K M E+AEA+LEDL  +GK TT
Sbjct: 312 LVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATT 371

Query: 374 PNCWGAVAVQYMDRSETEKSVECMKAALTLNM-DKGWKPNLRVITGILNWLGENASIEEV 433
           P  W  VA  Y ++   E + +CMK AL + +  + W+P L ++T +L+W+G+  S++EV
Sbjct: 372 PESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEV 431

Query: 434 EAFVGSLRSVIPVNREMYHALMKAHIR-GGKEVHELLNQMKSDKIDEDEETKKILGT 489
           E+FV SLR+ I VN++MYHAL+KA IR GG+ +  LL +MK DKI+ DEET  IL T
Sbjct: 432 ESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILST 488

[Close]

BLAST of CmoCh18G003440 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 292.7 bits (748), Expect = 5.4e-79
Identity = 154/427 (36.07%), Postives = 253/427 (59.25%), Query Frame = 0


Query: 29  LYAKISPLGDPSVSVEPVLDGWVKEGKKVRIAELQRIIHDLRKRKRFTQALEVSEWMKKT 88
           +Y KIS +  P +    VL+ W K G+K+   EL R++ +LRK KR  QALEV +WM   
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 89  GVCI-FSPSEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYVRQRQVEKS 148
           G     S S+ A+QLDLIG+VRG   AE +F QL E  +  + YG+LLN YVR +  EK+
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 149 LSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPEVLAEMKEKNVSPDNFSYRICINS 208
            + L  M++ G+A   L +N MM LY N+ ++DKV  ++ EMK+K++  D +SY I ++S
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248

Query: 209 YGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKADLADKAVDALKKAEERLKSK 268
            G+   +E ME V ++M+S   I  +W T++ +A  +IK    +KA DAL+K E R+  +
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308

Query: 269 DRIGHNHLISLYATLGNKEKVLRLWNLDKTDTTRLINRDYITMLESLVRLGELEEAEKVL 328
           +RI +++L+SLY +LGNK+++ R+W++ K+    + N  Y  ++ SLVR+G++E AEKV 
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368

Query: 329 KEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKTTTPNCWGAVAVQYMDR 388
           +EW    + YD R+PN ++  Y+     E AE L + ++E G   + + W  +AV +  +
Sbjct: 369 EEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRK 428

Query: 389 SETEKSVECMKAALTLNMDKGWKPNLRVITGILNWLGENASIEEVEAFVGSLRSVIPVNR 448
               +++ C++ A +      W+P + +++G      E + +   EA +  LR    +  
Sbjct: 429 RCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLED 488

Query: 449 EMYHALM 455
           + Y AL+
Sbjct: 489 KSYLALI 495

[Close]

BLAST of CmoCh18G003440 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 285.4 bits (729), Expect = 8.6e-77
Identity = 147/404 (36.39%), Postives = 244/404 (60.40%), Query Frame = 0


Query: 28  TLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIAELQRIIHDLRKRKRFTQALEVSEWMKK 87
           TL  +++  GDPS S+  VLDGW+ +G  V+ +EL  II  LRK  RF+ AL++S+WM +
Sbjct: 39  TLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSE 98

Query: 88  TGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYVRQRQVEKS 147
             V   S  + A++LDLI +V G   AE +F  +  + +    YGALLNCY  ++ + K+
Sbjct: 99  HRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKA 158

Query: 148 LSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPEVLAEMKEKNVSPDNFSYRICINS 207
               Q+MKE+GF    L YN M+ LY   G++  V ++L EM+++ V PD F+    +++
Sbjct: 159 EQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHA 218

Query: 208 YGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKADLADKAVDALKKAEERLKS- 267
           Y    D+EGME  L   E+   + +DW TYA  AN +IKA L +KA++ L+K+E+ + + 
Sbjct: 219 YSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQ 278

Query: 268 KDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTTRLINRDYITMLESLVRLGELEEAEKV 327
           K +  +  L+S Y   G KE+V RLW+L K +     N  YI+++ +L+++ ++EE EK+
Sbjct: 279 KRKHAYEVLMSFYGAAGKKEEVYRLWSLYK-ELDGFYNTGYISVISALLKMDDIEEVEKI 338

Query: 328 LKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKTTTPNCWGAVAVQYMD 387
           ++EWE+  + +D R+P+ +I GY  KGM E+AE ++  L++K +    + W  +A+ Y  
Sbjct: 339 MEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKM 398

Query: 388 RSETEKSVECMKAALTLNMDKGWKPNLRVITGILNWLGENASIE 431
             + EK+VE  K A+ ++   GW+P+  V+   +++L     +E
Sbjct: 399 AGKMEKAVEKWKRAIEVS-KPGWRPHQVVLMSCVDYLEGQRDME 440

[Close]

BLAST of CmoCh18G003440 vs. TAIR 10
Match: AT4G01990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 276.2 bits (705), Expect = 5.2e-74
Identity = 152/467 (32.55%), Postives = 265/467 (56.75%), Query Frame = 0


Query: 21  TNRLKKATLYAKISPLGD-PSVSVEPVLDGWVKEGKKVRIAELQRIIHDLRKRKRFTQAL 80
           T   K  ++Y K+S LG      +E  L+ +V EG  V+  +L R   DLRK ++  +AL
Sbjct: 33  TKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRAL 92

Query: 81  EVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYV 140
           E+ EWM++  +  F+ S+HA++L+LI + +G  +AE+YFN L +  +   TYG+LLNCY 
Sbjct: 93  EIFEWMERKEIA-FTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYC 152

Query: 141 RQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPEVLAEMKEKNVSPDNF 200
            +++  K+ +H + M ++   ++ L +N++M +Y  +GQ +KVP ++  MKEK+++P + 
Sbjct: 153 VEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDI 212

Query: 201 SYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKADLADKAVDALKK 260
           +Y + I S G+ +DL+G+E VL EM+++   +  WNT+A +A  +IK  L  KA +ALK 
Sbjct: 213 TYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKS 272

Query: 261 AEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTTRLINRDYITMLESLVRLGE 320
            E  +    R  ++ LI+LY  + N  +V R+W+L K     + N  Y+TML +L +L +
Sbjct: 273 LENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDD 332

Query: 321 LEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKTTTPNCWGA 380
           ++  +KV  EWES+   YD R+ N  I  Y+ + M E AEA+    M+K K         
Sbjct: 333 IDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQL 392

Query: 381 VAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGILNWLGENASIEEVEAFVGSL 440
           + +  +   + + +++  +AA+ L+ DK W  +  +I+       E   ++  E F  +L
Sbjct: 393 LMMHLLKNDQADLALKHFEAAV-LDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTL 452

Query: 441 RSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEETKKIL 487
               P++ E Y  LMK ++  GK   ++  +++   I  DEE + +L
Sbjct: 453 TKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLL 497

[Close]

BLAST of CmoCh18G003440 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 263.8 bits (673), Expect = 2.7e-70
Identity = 145/438 (33.11%), Postives = 251/438 (57.31%), Query Frame = 0


Query: 50  WVKEGKKVRIAELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVR 109
           W +EG  VR  EL RI+ +LRK KR+  ALE+ EWM           ++AV LDLI ++R
Sbjct: 84  WKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIR 143

Query: 110 GYLSAESYFNQLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDM 169
           G  SAE +F  + +Q +      +LL+ YV+ +  +K+ +  +KM E GF  S L YN M
Sbjct: 144 GLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHM 203

Query: 170 MCLYTNVGQHDKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENV-LKEMESQP 229
           + +Y + GQ +KVP ++ E+K +  SPD  +Y + + ++ +  D+EG E V LK  E + 
Sbjct: 204 LSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEK- 263

Query: 230 HIVMDWNTYAVVANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKV 289
            +  DW TY+V+ N + K D  +KA  ALK+ E+ +  K+R+ +  LISL+A LG+K+ V
Sbjct: 264 -LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGV 323

Query: 290 LRLWNLDKTDTTRLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVG 349
              W   K+   ++ + +Y++M+ ++V+LGE E+A+ +  EWES     D R+PN ++  
Sbjct: 324 NLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAE 383

Query: 350 YIDKGMCERAEALLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKG 409
           Y+++      E   E ++EKG   + + W  +   Y+ R + EK ++C   A  ++  K 
Sbjct: 384 YMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKA--IDSVKK 443

Query: 410 WKPNLRVITGILNWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELL 469
           W  N+R++ G    L E  +++  E  +  L+    VN ++Y++L++ + + G+    + 
Sbjct: 444 WTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMALIVE 503

Query: 470 NQMKSDKIDEDEETKKIL 487
            +M  D ++ DEETK+++
Sbjct: 504 ERMAKDNVELDEETKELI 516

The following BLAST results are available for this feature:

BLAST of CmoCh18G003440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JR3	3.4e-171	61.22	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
Q8LPS6	7.6e-78	36.07	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
Q9SKU6	1.2e-75	36.39	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
Q93WC5	7.4e-73	32.55	Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidop...	[more]
Q9SY07	3.8e-69	33.11	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]

BLAST of CmoCh18G003440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GTN5	2.0e-286	100.00	pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ...	[more]
A0A6J1K124	1.1e-281	98.19	pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ...	[more]
A0A6J1CGU2	1.5e-257	88.73	pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Momordic...	[more]
A0A5A7UM45	8.3e-245	84.51	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B5N2	8.3e-245	84.51	pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Cucumis ...	[more]

BLAST of CmoCh18G003440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954890.1	4.0e-286	100.00	pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ...	[more]
KAG6573262.1	6.9e-286	99.80	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG7012430.1	1.4e-283	99.39	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022994385.1	2.3e-281	98.19	pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ...	[more]
XP_023542644.1	5.7e-280	97.77	pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ...	[more]

BLAST of CmoCh18G003440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21705.1	2.4e-172	61.22	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	5.4e-79	36.07	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20710.1	8.6e-77	36.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G01990.1	5.2e-74	32.55	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02820.1	2.7e-70	33.11	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 52..72
None	No IPR available	COILS	Coil	Coil	coord: 250..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 473..487
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 473..496
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 16..488
None	No IPR available	PANTHER	PTHR45717:SF20	OS07G0598500 PROTEIN	coord: 16..488
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 293..405 e-value: 4.5E-9 score: 37.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 59..270 e-value: 1.2E-26 score: 95.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 310..404
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 165..208 e-value: 6.0E-9 score: 36.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 199..233 e-value: 0.0011 score: 16.9 coord: 130..159 e-value: 5.1E-5 score: 21.2 coord: 165..197 e-value: 5.2E-6 score: 24.3 coord: 307..337 e-value: 3.7E-4 score: 18.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 343..369 e-value: 0.06 score: 13.6 coord: 307..334 e-value: 0.0024 score: 18.0 coord: 130..159 e-value: 1.3E-4 score: 22.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 162..196 score: 10.39137
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 127..161 score: 9.613118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G003440.1	CmoCh18G003440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0043565	sequence-specific DNA binding