CmoCh18G002080 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G002080
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Citrulline--aspartate ligase
Location	Cmo_Chr18: 1373048 .. 1374417 (-)
RNA-Seq Expression	CmoCh18G002080
Synteny	CmoCh18G002080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTAACCGTAACATTAATAGCGATTTCCTCGTTCATTAAGTCGTCAGTATTACGCGGCAATATAAAGATGGCCGTCGGCCGTTCAATATTTTAAACCCTAGCGTCTTAGCCATTTTCAGAAAGCTGGTTGTCAGAAAGCTGATTGTCAGAAGGTTGTTCTTCTCTGAGATTTGCGAAGGTCACTATCGTCGCCGCTAACATCATGGCTCGGTTAATGGGAGGCTCTCTGTTCTCATCGGCTACTGGTGCTTTTCAGCCATCCAAAACAGGTATTTCGTTCGAAATCTTCATTCGTTGGAAATGGAAATGGAAATGGGAACGGAAATGGGAATGGATATGTTCGTGGTAACGTTTTTGATTTGTCTATTTGAGTTTGTGGCTACTCTGTAATGTTCTTTTGAAAAGATGGTGGAGAATATGATTCGATTGAGTTTTGTTAATCATATGTTATGTCCTGTGGTTTTTAAAGTACATTACCTGAGATTTCACACTTATGTTTTCATTTTCAGAGTCAGTGGCGAATTATTGCAGAATATCTGGCCCGGTGAAGTTGCATTTATTCCAAGAGGTATTTGAATCAATGATGCTTTCCCTTCTGTTATTCAATGAATTTGATCGATATCGGCCTGTTTTATCTGAATCTTGGACTTATTCAATTGCATTCGTGGGTGTAGCTGGGTGCAAAAGCGTCTGAACTTCATGGCAATGGCATAGCTAGTAACAGGGCTGGTGTTCTGCGGTCGAATAAGAAAAGCGGTGAGGTTCCGCTTGTTTGCTTGATATGTGCTTAATTCGCCCCCCGTCTATTGGGTTAGTTTAGTTCGCCAGTTTTAAGTCGTTTGGAGAAGCCAAGGGAGTTTATATCTGATGGAGCTTTTAATCATGGAGTCACTCTTTTAGTACTATTTGAATAGATGGTGATTACGTTCGTAGATGTGGGTATATTTACTTTAAAAGAGCAGCCTAGTGGTATATTTTGCCTTGCTTGTTTTACTCTGTGATTTAGATGCTTTATAAAATGTGCTTTTGTATTTTTCTCTTCACATCGTGTTTATAAAACTTTTAATCTTTCTTTTTGAATCACTGTTGAATACAGTTATACAGGCAATATTGCAGAGTGAGAGTGAGGTCGAAACTGCCAATGGTAGAGGGACTAGAGGTCTGCGAGGGCAGTTGAATAAGGTTGTTTTGGCTTATAGTGGTGGCTTAGACACATCAGTCATTGTTCCCTGGCTGAGGTAGGTCTTCATTTCTTACACCGATTCAGAGTTATGTTGTTTATTGATCTAGCCATGGACTTCTAAACTTATCAAATACTCATTCAGCAAGTGGCAGTAGTCGCATGATTGAAGAACTGAGAGATAGCTGA

mRNA sequence

GATTAACCGTAACATTAATAGCGATTTCCTCGTTCATTAAGTCGTCAGTATTACGCGGCAATATAAAGATGGCCGTCGGCCGTTCAATATTTTAAACCCTAGCGTCTTAGCCATTTTCAGAAAGCTGGTTGTCAGAAAGCTGATTGTCAGAAGGTTGTTCTTCTCTGAGATTTGCGAAGGTCACTATCGTCGCCGCTAACATCATGGCTCGGTTAATGGGAGGCTCTCTGTTCTCATCGGCTACTGGTGCTTTTCAGCCATCCAAAACAGAGTCAGTGGCGAATTATTGCAGAATATCTGGCCCGGTGAAGTTGCATTTATTCCAAGAGGTATTTGAATCAATGATGCTTTCCCTTCTGTTATTCAATGAATTTGATCGATATCGGCCTCTGGGTGCAAAAGCGTCTGAACTTCATGGCAATGGCATAGCTAGTAACAGGGCTGGTGTTCTGCGGTCGAATAAGAAAAGCGTTATACAGGCAATATTGCAGAGTGAGAGTGAGGTCGAAACTGCCAATGGTAGAGGGACTAGAGGTCTGCGAGGGCAGTTGAATAAGGTTGTTTTGGCTTATAGTGGTGGCTTAGACACATCAGTCATTGTTCCCTGGCTGAGCCATGGACTTCTAAACTTATCAAATACTCATTCAGCAAGTGGCAGTAGTCGCATGATTGAAGAACTGAGAGATAGCTGA

Coding sequence (CDS)

ATGGCTCGGTTAATGGGAGGCTCTCTGTTCTCATCGGCTACTGGTGCTTTTCAGCCATCCAAAACAGAGTCAGTGGCGAATTATTGCAGAATATCTGGCCCGGTGAAGTTGCATTTATTCCAAGAGGTATTTGAATCAATGATGCTTTCCCTTCTGTTATTCAATGAATTTGATCGATATCGGCCTCTGGGTGCAAAAGCGTCTGAACTTCATGGCAATGGCATAGCTAGTAACAGGGCTGGTGTTCTGCGGTCGAATAAGAAAAGCGTTATACAGGCAATATTGCAGAGTGAGAGTGAGGTCGAAACTGCCAATGGTAGAGGGACTAGAGGTCTGCGAGGGCAGTTGAATAAGGTTGTTTTGGCTTATAGTGGTGGCTTAGACACATCAGTCATTGTTCCCTGGCTGAGCCATGGACTTCTAAACTTATCAAATACTCATTCAGCAAGTGGCAGTAGTCGCATGATTGAAGAACTGAGAGATAGCTGA

Protein sequence

MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWLSHGLLNLSNTHSASGSSRMIEELRDS

Homology

[Close]

BLAST of CmoCh18G002080 vs. ExPASy Swiss-Prot
Match: Q9SZX3 (Argininosuccinate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g24830 PE=1 SV=3)

HSP 1 Score: 68.6 bits (166), Expect = 7.6e-11
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 59  RYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNK 118
           +++ L  K S+L GN + +      RS K   I+A+L  +    T + +   GLRG+L K
Sbjct: 40  QFQELSLKRSQLVGNAVVTGHVTGSRSCKNQAIRAVLSGDGTALTTDSK-EAGLRGKLKK 99

Query: 119 VVLAYSGGLDTSVIVPWL 137
           VVLAYSGGLDTSVIVPWL
Sbjct: 100 VVLAYSGGLDTSVIVPWL 116

[Close]

BLAST of CmoCh18G002080 vs. ExPASy Swiss-Prot
Match: A4XKG4 (Argininosuccinate synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) OX=351627 GN=argG PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.4e-04
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 0


Query: 115 QLNKVVLAYSGGLDTSVIVPWL 137
           QLNKVVLAYSGGLDTSVI+PWL
Sbjct: 2   QLNKVVLAYSGGLDTSVIIPWL 23

[Close]

BLAST of CmoCh18G002080 vs. ExPASy Swiss-Prot
Match: B9MRP5 (Argininosuccinate synthase OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) OX=521460 GN=argG PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.1e-04
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 0


Query: 115 QLNKVVLAYSGGLDTSVIVPWL 137
           +LNKVVLAYSGGLDTSVI+PWL
Sbjct: 2   KLNKVVLAYSGGLDTSVIIPWL 23

[Close]

BLAST of CmoCh18G002080 vs. ExPASy Swiss-Prot
Match: B2UYI0 (Argininosuccinate synthase OS=Clostridium botulinum (strain Alaska E43 / Type E3) OX=508767 GN=argG PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 6.9e-04
Identity = 18/22 (81.82%), Postives = 22/22 (100.00%), Query Frame = 0


Query: 115 QLNKVVLAYSGGLDTSVIVPWL 137
           +LNKV+LAYSGGLDTS+I+PWL
Sbjct: 3   KLNKVILAYSGGLDTSIIIPWL 24

[Close]

BLAST of CmoCh18G002080 vs. ExPASy Swiss-Prot
Match: B2TQ23 (Argininosuccinate synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) OX=935198 GN=argG PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 6.9e-04
Identity = 18/22 (81.82%), Postives = 22/22 (100.00%), Query Frame = 0


Query: 115 QLNKVVLAYSGGLDTSVIVPWL 137
           +LNKV+LAYSGGLDTS+I+PWL
Sbjct: 3   KLNKVILAYSGGLDTSIIIPWL 24

[Close]

BLAST of CmoCh18G002080 vs. ExPASy TrEMBL
Match: A0A6J1GSL4 (Citrulline--aspartate ligase OS=Cucurbita moschata OX=3662 GN=LOC111457148 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.1e-52
Identity = 116/136 (85.29%), Postives = 116/136 (85.29%), Query Frame = 0


Query: 1   MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRY 60
           MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE                  
Sbjct: 1   MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE------------------ 60

Query: 61  RPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVV 120
             LGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVV
Sbjct: 61  --LGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVV 116

Query: 121 LAYSGGLDTSVIVPWL 137
           LAYSGGLDTSVIVPWL
Sbjct: 121 LAYSGGLDTSVIVPWL 116

[Close]

BLAST of CmoCh18G002080 vs. ExPASy TrEMBL
Match: A0A6J1K5F5 (Citrulline--aspartate ligase OS=Cucurbita maxima OX=3661 GN=LOC111490225 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 7.8e-51
Identity = 113/136 (83.09%), Postives = 115/136 (84.56%), Query Frame = 0


Query: 1   MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRY 60
           MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE                  
Sbjct: 1   MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE------------------ 60

Query: 61  RPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVV 120
             LGAKASELHGNGIASNRAGVLRSNK SVIQAILQSESE+ETANGRGT+GLRGQLNKVV
Sbjct: 61  --LGAKASELHGNGIASNRAGVLRSNKNSVIQAILQSESEIETANGRGTKGLRGQLNKVV 116

Query: 121 LAYSGGLDTSVIVPWL 137
           LAYSGGLDTSVIVPWL
Sbjct: 121 LAYSGGLDTSVIVPWL 116

[Close]

BLAST of CmoCh18G002080 vs. ExPASy TrEMBL
Match: A0A6J1E7A9 (Citrulline--aspartate ligase OS=Cucurbita moschata OX=3662 GN=LOC111431281 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.3e-41
Identity = 97/136 (71.32%), Postives = 102/136 (75.00%), Query Frame = 0


Query: 1   MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRY 60
           MA+LMGG LFS+A G F PSK ESVA+YCRISGP KLH FQE                  
Sbjct: 1   MAQLMGGFLFSTAPGGFHPSKAESVASYCRISGPTKLHSFQE------------------ 60

Query: 61  RPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVV 120
             LGAKASE+HGN IA NRA VLRSNKKSVIQAILQSE E+ET NG  TRGLRGQLNKVV
Sbjct: 61  --LGAKASEIHGNSIACNRASVLRSNKKSVIQAILQSEREIETTNGITTRGLRGQLNKVV 116

Query: 121 LAYSGGLDTSVIVPWL 137
           LAYSGGLDTSVIVPWL
Sbjct: 121 LAYSGGLDTSVIVPWL 116

[Close]

BLAST of CmoCh18G002080 vs. ExPASy TrEMBL
Match: A0A6J1KF74 (Citrulline--aspartate ligase OS=Cucurbita maxima OX=3661 GN=LOC111495262 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.1e-39
Identity = 95/136 (69.85%), Postives = 100/136 (73.53%), Query Frame = 0


Query: 1   MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRY 60
           MA+LMGGSLFS+A G F PSK ESVA+YCRISG  KLH FQE                  
Sbjct: 1   MAQLMGGSLFSTAPGGFHPSKAESVASYCRISGSTKLHSFQE------------------ 60

Query: 61  RPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVV 120
             LGAKASE+HGN IA N A VLRSNKKSVIQAIL SE E+ET NG  TRGLRGQLNKVV
Sbjct: 61  --LGAKASEIHGNSIACNMASVLRSNKKSVIQAILPSERELETTNGITTRGLRGQLNKVV 116

Query: 121 LAYSGGLDTSVIVPWL 137
           LAYSGGLDTSVIVPWL
Sbjct: 121 LAYSGGLDTSVIVPWL 116

[Close]

BLAST of CmoCh18G002080 vs. ExPASy TrEMBL
Match: A0A0A0LWM9 (Citrulline--aspartate ligase OS=Cucumis sativus OX=3659 GN=Csa_1G050400 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.2e-38
Identity = 93/136 (68.38%), Postives = 100/136 (73.53%), Query Frame = 0


Query: 1   MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRY 60
           MA+LMGGSLFSSA   F PSKTE+VA+YCRIS   KLH FQE                  
Sbjct: 1   MAQLMGGSLFSSAPVGFHPSKTEAVASYCRISSLTKLHSFQE------------------ 60

Query: 61  RPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVV 120
             LGAK  E+HGNG++SN AGVLRSNKK VIQAILQSE E+ET NG GT GLRGQLNKVV
Sbjct: 61  --LGAKTCEIHGNGLSSNSAGVLRSNKKRVIQAILQSEREIETTNGIGTGGLRGQLNKVV 116

Query: 121 LAYSGGLDTSVIVPWL 137
           LAYSGGLDTSVIVPWL
Sbjct: 121 LAYSGGLDTSVIVPWL 116

[Close]

BLAST of CmoCh18G002080 vs. NCBI nr
Match: XP_022955077.1 (argininosuccinate synthase, chloroplastic-like [Cucurbita moschata] >KAG7012308.1 Argininosuccinate synthase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.4 bits (542), Expect = 1.5e-51
Identity = 116/136 (85.29%), Postives = 116/136 (85.29%), Query Frame = 0


Query: 1   MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRY 60
           MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE                  
Sbjct: 1   MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE------------------ 60

Query: 61  RPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVV 120
             LGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVV
Sbjct: 61  --LGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVV 116

Query: 121 LAYSGGLDTSVIVPWL 137
           LAYSGGLDTSVIVPWL
Sbjct: 121 LAYSGGLDTSVIVPWL 116

[Close]

BLAST of CmoCh18G002080 vs. NCBI nr
Match: XP_022994533.1 (argininosuccinate synthase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-50
Identity = 113/136 (83.09%), Postives = 115/136 (84.56%), Query Frame = 0


Query: 1   MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRY 60
           MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE                  
Sbjct: 1   MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE------------------ 60

Query: 61  RPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVV 120
             LGAKASELHGNGIASNRAGVLRSNK SVIQAILQSESE+ETANGRGT+GLRGQLNKVV
Sbjct: 61  --LGAKASELHGNGIASNRAGVLRSNKNSVIQAILQSESEIETANGRGTKGLRGQLNKVV 116

Query: 121 LAYSGGLDTSVIVPWL 137
           LAYSGGLDTSVIVPWL
Sbjct: 121 LAYSGGLDTSVIVPWL 116

[Close]

BLAST of CmoCh18G002080 vs. NCBI nr
Match: XP_023542652.1 (argininosuccinate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.5 bits (524), Expect = 1.8e-49
Identity = 112/136 (82.35%), Postives = 113/136 (83.09%), Query Frame = 0


Query: 1   MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRY 60
           MARL GGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE                  
Sbjct: 1   MARLTGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE------------------ 60

Query: 61  RPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVV 120
             LGAKASELHGN IASNRAGVLRSNKK VIQAILQSESE+ETANGRGTRGLRGQLNKVV
Sbjct: 61  --LGAKASELHGNSIASNRAGVLRSNKKRVIQAILQSESEIETANGRGTRGLRGQLNKVV 116

Query: 121 LAYSGGLDTSVIVPWL 137
           LAYSGGLDTSVIVPWL
Sbjct: 121 LAYSGGLDTSVIVPWL 116

[Close]

BLAST of CmoCh18G002080 vs. NCBI nr
Match: KAG6573121.1 (Argininosuccinate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206.5 bits (524), Expect = 1.8e-49
Identity = 112/132 (84.85%), Postives = 112/132 (84.85%), Query Frame = 0


Query: 5   MGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLG 64
           MGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE                    LG
Sbjct: 1   MGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE--------------------LG 60

Query: 65  AKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVVLAYS 124
           AKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVVLAYS
Sbjct: 61  AKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVVLAYS 112

Query: 125 GGLDTSVIVPWL 137
           GGLDTSVIVPWL
Sbjct: 121 GGLDTSVIVPWL 112

[Close]

BLAST of CmoCh18G002080 vs. NCBI nr
Match: XP_023519539.1 (argininosuccinate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179.9 bits (455), Expect = 1.8e-41
Identity = 98/136 (72.06%), Postives = 103/136 (75.74%), Query Frame = 0


Query: 1   MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRY 60
           MA+LMGGSLFS+A G F PSK ESVA+YCRISGP KLH FQE                  
Sbjct: 1   MAQLMGGSLFSTAPGGFHPSKAESVASYCRISGPTKLHSFQE------------------ 60

Query: 61  RPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVV 120
             LGAKASE+HGN IA NRA VLRSNKKSVIQAILQSE E+ET NG  TRGLRGQLNKVV
Sbjct: 61  --LGAKASEIHGNSIACNRASVLRSNKKSVIQAILQSEREIETTNGITTRGLRGQLNKVV 116

Query: 121 LAYSGGLDTSVIVPWL 137
           LAYSGGLDTSVIVPWL
Sbjct: 121 LAYSGGLDTSVIVPWL 116

[Close]

BLAST of CmoCh18G002080 vs. TAIR 10
Match: AT4G24830.1 (arginosuccinate synthase family )

HSP 1 Score: 68.6 bits (166), Expect = 5.4e-12
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 59  RYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNK 118
           +++ L  K S+L GN + +      RS K   I+A+L  +    T + +   GLRG+L K
Sbjct: 40  QFQELSLKRSQLVGNAVVTGHVTGSRSCKNQAIRAVLSGDGTALTTDSK-EAGLRGKLKK 99

Query: 119 VVLAYSGGLDTSVIVPWL 137
           VVLAYSGGLDTSVIVPWL
Sbjct: 100 VVLAYSGGLDTSVIVPWL 116

[Close]

BLAST of CmoCh18G002080 vs. TAIR 10
Match: AT4G24830.2 (arginosuccinate synthase family )

HSP 1 Score: 68.6 bits (166), Expect = 5.4e-12
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 59  RYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNK 118
           +++ L  K S+L GN + +      RS K   I+A+L  +    T + +   GLRG+L K
Sbjct: 40  QFQELSLKRSQLVGNAVVTGHVTGSRSCKNQAIRAVLSGDGTALTTDSK-EAGLRGKLKK 99

Query: 119 VVLAYSGGLDTSVIVPWL 137
           VVLAYSGGLDTSVIVPWL
Sbjct: 100 VVLAYSGGLDTSVIVPWL 116

The following BLAST results are available for this feature:

BLAST of CmoCh18G002080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZX3	7.6e-11	47.44	Argininosuccinate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4...	[more]
A4XKG4	1.4e-04	95.45	Argininosuccinate synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC ...	[more]
B9MRP5	4.1e-04	90.91	Argininosuccinate synthase OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 ...	[more]
B2UYI0	6.9e-04	81.82	Argininosuccinate synthase OS=Clostridium botulinum (strain Alaska E43 / Type E3...	[more]
B2TQ23	6.9e-04	81.82	Argininosuccinate synthase OS=Clostridium botulinum (strain Eklund 17B / Type B)...	[more]

BLAST of CmoCh18G002080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GSL4	7.1e-52	85.29	Citrulline--aspartate ligase OS=Cucurbita moschata OX=3662 GN=LOC111457148 PE=3 ...	[more]
A0A6J1K5F5	7.8e-51	83.09	Citrulline--aspartate ligase OS=Cucurbita maxima OX=3661 GN=LOC111490225 PE=3 SV...	[more]
A0A6J1E7A9	4.3e-41	71.32	Citrulline--aspartate ligase OS=Cucurbita moschata OX=3662 GN=LOC111431281 PE=3 ...	[more]
A0A6J1KF74	3.1e-39	69.85	Citrulline--aspartate ligase OS=Cucurbita maxima OX=3661 GN=LOC111495262 PE=3 SV...	[more]
A0A0A0LWM9	1.2e-38	68.38	Citrulline--aspartate ligase OS=Cucumis sativus OX=3659 GN=Csa_1G050400 PE=3 SV=...	[more]

BLAST of CmoCh18G002080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955077.1	1.5e-51	85.29	argininosuccinate synthase, chloroplastic-like [Cucurbita moschata] >KAG7012308....	[more]
XP_022994533.1	1.6e-50	83.09	argininosuccinate synthase, chloroplastic-like [Cucurbita maxima]	[more]
XP_023542652.1	1.8e-49	82.35	argininosuccinate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
KAG6573121.1	1.8e-49	84.85	Argininosuccinate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp...	[more]
XP_023519539.1	1.8e-41	72.06	argininosuccinate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh18G002080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24830.1	5.4e-12	47.44	arginosuccinate synthase family	[more]
AT4G24830.2	5.4e-12	47.44	arginosuccinate synthase family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 112..146 e-value: 2.1E-7 score: 32.9
IPR018223	Argininosuccinate synthase, conserved site	PROSITE	PS00564	ARGININOSUCCIN_SYN_1	coord: 122..130
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 117..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G002080.1	CmoCh18G002080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006526	arginine biosynthetic process
biological_process	GO:0000053	argininosuccinate metabolic process
biological_process	GO:0000050	urea cycle
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004055	argininosuccinate synthase activity
molecular_function	GO:0005524	ATP binding