CmoCh18G000930 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCACATGAAGAGAGGACCGTTCATTAGTTGAGGGCAAATTTCTGTATCGTAGCGGAAAAGAAGCAGTGAAAATGGAGGAGAAGGATCCAGATTCCGTCACTCAAACGCATCGTTCTTCGATTAAGACTCATCCTCGTTACAACAATCATCAGTCATGGAAGGAGAAGGTGAATTTTCTCTTTTCTTGATGCCAATTGTTTTGTGTTTCTTGCGGGATATATGATCAATTAGAAGAAGAAGAATAATGTATTCGTTAATTTTATTCGAAATTGATAATTTTACTGTGATTAGCTGAGGGAGAATTGTTGCAAGAGGGTCAGAGAAGGAAGAAACCGCTTGCTCTGGAAGATGAGGTCGCCCGGTTATCTCCATTCTCTCGATGATCGGCAGCAGGTTCGTTTTTGTAAATATTTCTGTAATATATACGATTTTAACAATTAGTTGTTGGATCTTCTATGTTGCTCTTTGTTTTCTTACATGACTTACTTCTTTTGTTATGTAATTTGCATGTGTTTTTTTTTGGATTTTTGGTTGGTTGTAGGATTTCATCAGATCTTCTTTTCAAGATATATTTTCTGATGAGCTGAAAAAGATTAAAGACGAAGCTGAGAATGAATGTTATAAGAATTTACCCTCTGCTCCCGAGTCTGATGATGTTCTTTGGGAATATGAGGGGCTTCATGATGCTTATGGAGGTGAAGGTGAAGAAATTTTGTTGGAAATGCAAAGGATTTTTTATGAGGATTTGAATGTTGATCTGAAACAAAAAGGTGTTTTTTCTAACGCCATTTTACTTGTTCATGTTCATTGGCTTCACTGACTGTATCTGTAATAACCCGAGTCCACTGCTAGTAGATATTTTCTTCTTTAGGCTTTCCTTTCTGAGTTTTCCCTCAAGGTTTAAAAACGCGTCTACTAGGGAGATGTTTCCACACCCTTATAAAGAATGTTTCATTCCCCTCTCCAATCAATGTGGGATCTCACAATCCCCACCCCCTTCAGGGCCCAGTGTCTTTGTTGACACTCGTTCCCCTCTCCAATCGATGTGGAACACTCCCAATCCATCCCCTTTGGGGCTCAGCCTCCTCGCTGGCACATAACCCAGTGACTCTGATACCATTTGTAACAGCCCAAGCCCACCGCTAGTAAATATTGTTTTCTTTGGCTTTTCCCTTCCAGGGTTCCCCTCAAGGTTTTAAAATGCATTTGCTAGAGAGAGGTTTCCACACTCTTATAAAGAATGCTTAATTCTCCACTCCAACTGATGTGAGATGTCTTTGAATTGAAAAACATCCTCCTTTTAACTGCGGAACAAATTTAGTAGCAGTGAGCAGGCTTTGTCTTCCAAAGAATAAATGATTTGTTGTCATCTGTTCTTTTAGCAGGCTTTGTTATATTAGAGCCATGGTTATTGATCTTCTCTGGTAGTATTTAAGCTGTTAAAATCACTATTTTGAGTAGGATGTTTACTCAGCTCCTTGCAGAATCTGAAGGCCCTATTGTAACATGGGAAGACGAAGAAGACGAGTTCTTAGCCCGTGCAGTTTACGAACATATGCAACTTAACAGTGAGAAGGTTGGTTTTCATCTTGATTCTTGAGGGCTGTAATTAACTTGAAATTTTGGATGCCTTTAGGCATTCTTGTTAACTAGATCTTACATTTCCTTTTTTTTTTTTTTTTATCTATTTTGGATGTCTTGTTAGGATCTTGGGAAGTTATGGTGTCCTATTTGTAAACAAGGAGATCTGCAAGAGAACAAACACTTCATACATTGCACTCACTGTGGAGTTCAGCTTAACAAAGGCAATGAGGTTTTCCACTAATTTGATCTTAAGAGCTTATAGTCCACCATCCTCATCTTAATCCATGTCCATGTTAAGATATTTATAGTTACTATTGTTAGAGACTACGGATCTCCACAATGGTATGATATCATCCACGTTGAGCATAAGCTCTCATGACTTTGCTTTTGGTTTCCCCAAAAGACCTCATAACATGGGAGATGTATTCATTACTTATAAACTCACGATCATTCCCTTAATTAGCCAATGTGGGACTCCCTCTCAACAATCCTCTCCTCGAACAAAGTACACCATGGATCCTCCCTTGAGGTCTATGTAGCCCTCGAACAATCTTCCCTTAATTGAGGCTCGACTCTTTTTTTTAGAGCCCTCGAACAAAGTACACCATTTGTTCGATACTTAAGTCACTTTTGACTACACCTTTGAGGCTAGCAACTTTGTTCAACACTTGAGGATTCTATTGACATGACTAAACTAAGGGTATGGTTTTGATACCATGTTAGAAATCACAGACTTCCACAATGGTATGACATTGTCCACTTTGAGCATAAACTCTCATAGATTAGCTTTTGGTTCCCCTAAAAGACCTCGTTCTAGTGGAGACGTATTCATTACTTATAAACCAATGATCATCCCCTTAATTAGCCAACGTGGGACTCTCTCCCAACAATCCTCTACAACTACTACCATATAATATTTTTATTGTTTTAGAGTTCAGTGACACGGTAGTACAATCTATAGAACAAATCCTGTTCAAGCAACGTCGTGACATTATTAGATAATACGTCGGCTGAGTATTTATATTTAGAAATTGTGGTTGCCATCTTTCTTTAACTTGTCAGATCATTGCCTGTGACTTTGATATATGATCTCGTGATGGGGCTTAATAAATCGGATTATCTTGAGCTGCTGTGGTCCCATTGGCCATGCCTGGAATTGAATAACTTGTCGAATAACAGGGTGCTGTATAGAAAGAAAAAGTAAAATTGATGTGCAAATCTCGACATGATTCGAATGCTTGATCGATAACAAAACAACCGTTGTTTGTCTCTACCGTCTTTTAATTACTAGTTATATGGCCTTTCAGGTTACTCTGGACCTCCTCCGCTCCCGGTTGGCCGATGTGCATGCTGAACATCTCGATCGAGGTTGCAGGTTGAGACCTATGTTCTGTGTTGAGAGTAGATTTAACATAACTGCATTATATATCTCTTGTAAAGGCTGCAACACATTTGAGGTTGTCATGTAGCATTGTTAAGAAACAGATCCCTTCAGGTTCAGTTGTGTGATTAAAATTGGTTTTATTAGTTATGACAGAATGATGACCAACATTTTTGATGGGTAACATAGCATGTATGAAGAATCAGGTGTCTCTAACGACTCGTTATTACTAATAAAGATGTCATCGTACCTAAACTAGCCGTCTGTTGCTCGGGGCTGATTGGTTCTGTAGGTTGTACAACTATGCCCTCGAATTCTAAGGAATCGAGTTTCCTAGGTTCCTATGATTAAAATTACTTTTACTAGAAATGATAGAATGACGATTTTTTTTAAAATTACTTTTACTACACATGATAGCTCCAACATTTCTCTTGCATTCCTTGCGACATGGTCACATTACCATCGGTCAATGATTAACCATTTTGCTTGCAAGGTAAATGCTCAATGACCTAGGTTTTGGACCTGACTAACCGGTTTTGGACCTGACTAACCCTAGACTTAATCGAGCTACTTTTACTCGAACTTCCTTCATTACAAACCTATTTAAGGTGATTTTATAGTTGCGTATTTTATCACGATAAATTTTAATTTAGTCAACTAAATATTAATGGTACTTGACTTGGTTTTTATAGACTAAAAGACTAATCAAAGGCTAAAGATATGCATTATCCTCTTCAAATATCTATGCCCAATCAACCAATACCTCCAAATAAACTAACAATGGAGTGGAAGAATTATTATTTGGATGTTATATTGATTCCTCTTGGTCTTCTCTTAAACTTCACTTATCATGCTTGGTTATGGTACAAGGTTAAGACTCAGCCACTCGCCACCATCATCGGAGTTAATGCCGCCGTCCGCCGCCCGTGGATCGCCACCATGCTTGCGGTATTTTCCTTTTTTACCATCTCTAAGTCATGTGACCATCATCTTTTCAGTCGTCGTCTAATTGAACTTTTATTATCATATCCCATATAATTTTCTTATTCTTTTAGGATCGAGAATCTTAGATTTATCTATCTATATATATATATATATATAAACATTGATCTTGATTTATGGGTTGAAACTTTTATGCTCGGGTCACCCAGCCAACCAAAAAATACAATTCACAACCCACCAAATTTTACTGTACTTTTAAGATTATTACAAAGATTAAAAATAATTAATATTCTCCAGGACATAGACAAGAAGAGCATCATCGCAATTCAAACATTTAGAAACATGATCATGGGTTCAAGCCTCATGGCGACCACCTCAATCCTCCTCTGCGCGGGGCTCGCTGCCGTCCTCAGCAGCTCATACAGCATCAAAAAGCCACTGACCGACACCGTCTACGGCGCGCACGGGGAGTTCACATTGGTTCTAAAGTTCGTAACAATCCTAACCATCTTCATCTTCTCCTTCTTCTGCCATTCCTTGTCCATCAAGTTCATGAACCAAGCCAGCCTTCTGATCAGCGCCCCATTGCAGCCCTTGTCCGTGCTAACAGAGCACCATTTGGTGGACCTTTTGGACAAAGGCTGTGTTTTGAACACCGTTGGGAATAGACTCTTCTATTTAGCTCTGCCTTTGTTGCTTTGGACTTGTGGACCATTGCTTGTTTTCTTGAGCTCTGTAGTGATGGTTCCTGTGCTTTATAATCTTGACTTTGTTTCTAAAAAACCAAGTGATGGAAAAACGGATCGTGATATCGTTTAA CCACATGAAGAGAGGACCGTTCATTAGTTGAGGGCAAATTTCTGTATCGTAGCGGAAAAGAAGCAGTGAAAATGGAGGAGAAGGATCCAGATTCCGTCACTCAAACGCATCGTTCTTCGATTAAGACTCATCCTCGTTACAACAATCATCAGTCATGGAAGGAGAAGCTGAGGGAGAATTGTTGCAAGAGGGTCAGAGAAGGAAGAAACCGCTTGCTCTGGAAGATGAGGTCGCCCGGTTATCTCCATTCTCTCGATGATCGGCAGCAGGATTTCATCAGATCTTCTTTTCAAGATATATTTTCTGATGAGCTGAAAAAGATTAAAGACGAAGCTGAGAATGAATGTTATAAGAATTTACCCTCTGCTCCCGAGTCTGATGATGTTCTTTGGGAATATGAGGGGCTTCATGATGCTTATGGAGGTGAAGGTGAAGAAATTTTGTTGGAAATGCAAAGGATTTTTTATGAGGATTTGAATGTTGATCTGAAACAAAAAGAATCTGAAGGCCCTATTGTAACATGGGAAGACGAAGAAGACGAGTTCTTAGCCCGTGCAGTTTACGAACATATGCAACTTAACAGTGAGAAGGATCTTGGGAAGTTATGGTGTCCTATTTGTAAACAAGGAGATCTGCAAGAGAACAAACACTTCATACATTGCACTCACTGTGGAGTTCAGCTTAACAAAGGCAATGAGGTTACTCTGGACCTCCTCCGCTCCCGGTTGGCCGATGTGCATGCTGAACATCTCGATCGAGGTTGCAGGTTGAGACCTATGTTCTGTGTTGAGAGTAGATTTAACATAACTGCATTATATATCTCTTGTAAAGGCTGCAACACATTTGAGGTTAAGACTCAGCCACTCGCCACCATCATCGGAGTTAATGCCGCCGTCCGCCGCCCGTGGATCGCCACCATGCTTGCGGACATAGACAAGAAGAGCATCATCGCAATTCAAACATTTAGAAACATGATCATGGGTTCAAGCCTCATGGCGACCACCTCAATCCTCCTCTGCGCGGGGCTCGCTGCCGTCCTCAGCAGCTCATACAGCATCAAAAAGCCACTGACCGACACCGTCTACGGCGCGCACGGGGAGTTCACATTGGTTCTAAAGTTCGTAACAATCCTAACCATCTTCATCTTCTCCTTCTTCTGCCATTCCTTGTCCATCAAGTTCATGAACCAAGCCAGCCTTCTGATCAGCGCCCCATTGCAGCCCTTGTCCGTGCTAACAGAGCACCATTTGGTGGACCTTTTGGACAAAGGCTGTGTTTTGAACACCGTTGGGAATAGACTCTTCTATTTAGCTCTGCCTTTGTTGCTTTGGACTTGTGGACCATTGCTTGTTTTCTTGAGCTCTGTAGTGATGGTTCCTGTGCTTTATAATCTTGACTTTGTTTCTAAAAAACCAAGTGATGGAAAAACGGATCGTGATATCGTTTAA ATGGAGGAGAAGGATCCAGATTCCGTCACTCAAACGCATCGTTCTTCGATTAAGACTCATCCTCGTTACAACAATCATCAGTCATGGAAGGAGAAGCTGAGGGAGAATTGTTGCAAGAGGGTCAGAGAAGGAAGAAACCGCTTGCTCTGGAAGATGAGGTCGCCCGGTTATCTCCATTCTCTCGATGATCGGCAGCAGGATTTCATCAGATCTTCTTTTCAAGATATATTTTCTGATGAGCTGAAAAAGATTAAAGACGAAGCTGAGAATGAATGTTATAAGAATTTACCCTCTGCTCCCGAGTCTGATGATGTTCTTTGGGAATATGAGGGGCTTCATGATGCTTATGGAGGTGAAGGTGAAGAAATTTTGTTGGAAATGCAAAGGATTTTTTATGAGGATTTGAATGTTGATCTGAAACAAAAAGAATCTGAAGGCCCTATTGTAACATGGGAAGACGAAGAAGACGAGTTCTTAGCCCGTGCAGTTTACGAACATATGCAACTTAACAGTGAGAAGGATCTTGGGAAGTTATGGTGTCCTATTTGTAAACAAGGAGATCTGCAAGAGAACAAACACTTCATACATTGCACTCACTGTGGAGTTCAGCTTAACAAAGGCAATGAGGTTACTCTGGACCTCCTCCGCTCCCGGTTGGCCGATGTGCATGCTGAACATCTCGATCGAGGTTGCAGGTTGAGACCTATGTTCTGTGTTGAGAGTAGATTTAACATAACTGCATTATATATCTCTTGTAAAGGCTGCAACACATTTGAGGTTAAGACTCAGCCACTCGCCACCATCATCGGAGTTAATGCCGCCGTCCGCCGCCCGTGGATCGCCACCATGCTTGCGGACATAGACAAGAAGAGCATCATCGCAATTCAAACATTTAGAAACATGATCATGGGTTCAAGCCTCATGGCGACCACCTCAATCCTCCTCTGCGCGGGGCTCGCTGCCGTCCTCAGCAGCTCATACAGCATCAAAAAGCCACTGACCGACACCGTCTACGGCGCGCACGGGGAGTTCACATTGGTTCTAAAGTTCGTAACAATCCTAACCATCTTCATCTTCTCCTTCTTCTGCCATTCCTTGTCCATCAAGTTCATGAACCAAGCCAGCCTTCTGATCAGCGCCCCATTGCAGCCCTTGTCCGTGCTAACAGAGCACCATTTGGTGGACCTTTTGGACAAAGGCTGTGTTTTGAACACCGTTGGGAATAGACTCTTCTATTTAGCTCTGCCTTTGTTGCTTTGGACTTGTGGACCATTGCTTGTTTTCTTGAGCTCTGTAGTGATGGTTCCTGTGCTTTATAATCTTGACTTTGTTTCTAAAAAACCAAGTGATGGAAAAACGGATCGTGATATCGTTTAA MEEKDPDSVTQTHRSSIKTHPRYNNHQSWKEKLRENCCKRVREGRNRLLWKMRSPGYLHSLDDRQQDFIRSSFQDIFSDELKKIKDEAENECYKNLPSAPESDDVLWEYEGLHDAYGGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKDLGKLWCPICKQGDLQENKHFIHCTHCGVQLNKGNEVTLDLLRSRLADVHAEHLDRGCRLRPMFCVESRFNITALYISCKGCNTFEVKTQPLATIIGVNAAVRRPWIATMLADIDKKSIIAIQTFRNMIMGSSLMATTSILLCAGLAAVLSSSYSIKKPLTDTVYGAHGEFTLVLKFVTILTIFIFSFFCHSLSIKFMNQASLLISAPLQPLSVLTEHHLVDLLDKGCVLNTVGNRLFYLALPLLLWTCGPLLVFLSSVVMVPVLYNLDFVSKKPSDGKTDRDIV Homology
BLAST of CmoCh18G000930 vs. ExPASy TrEMBL
Match: A0A5D3BJ40 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002980 PE=4 SV=1) HSP 1 Score: 547.4 bits (1409), Expect = 5.9e-152 Identity = 277/384 (72.14%), Postives = 310/384 (80.73%), Query Frame = 0
BLAST of CmoCh18G000930 vs. ExPASy TrEMBL
Match: A0A6J1GT42 (uncharacterized protein LOC111457192 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457192 PE=4 SV=1) HSP 1 Score: 547.0 bits (1408), Expect = 7.6e-152 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
BLAST of CmoCh18G000930 vs. ExPASy TrEMBL
Match: A0A6J1JWH1 (uncharacterized protein LOC111490304 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490304 PE=4 SV=1) HSP 1 Score: 533.9 bits (1374), Expect = 6.7e-148 Identity = 253/260 (97.31%), Postives = 256/260 (98.46%), Query Frame = 0
BLAST of CmoCh18G000930 vs. ExPASy TrEMBL
Match: A0A1S3AU18 (uncharacterized protein LOC103482820 OS=Cucumis melo OX=3656 GN=LOC103482820 PE=4 SV=1) HSP 1 Score: 453.0 bits (1164), Expect = 1.5e-123 Identity = 215/264 (81.44%), Postives = 240/264 (90.91%), Query Frame = 0
BLAST of CmoCh18G000930 vs. ExPASy TrEMBL
Match: A0A0A0LTY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G044910 PE=4 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 3.3e-123 Identity = 215/264 (81.44%), Postives = 238/264 (90.15%), Query Frame = 0
BLAST of CmoCh18G000930 vs. NCBI nr
Match: KAG6573010.1 (hypothetical protein SDJN03_26897, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 911.4 bits (2354), Expect = 3.2e-261 Identity = 454/456 (99.56%), Postives = 455/456 (99.78%), Query Frame = 0
BLAST of CmoCh18G000930 vs. NCBI nr
Match: KAG7012195.1 (hypothetical protein SDJN02_24947 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 911.0 bits (2353), Expect = 4.2e-261 Identity = 453/458 (98.91%), Postives = 455/458 (99.34%), Query Frame = 0
BLAST of CmoCh18G000930 vs. NCBI nr
Match: TYJ99094.1 (uncharacterized protein E5676_scaffold248G002980 [Cucumis melo var. makuwa]) HSP 1 Score: 547.4 bits (1409), Expect = 1.2e-151 Identity = 277/384 (72.14%), Postives = 310/384 (80.73%), Query Frame = 0
BLAST of CmoCh18G000930 vs. NCBI nr
Match: XP_022955133.1 (uncharacterized protein LOC111457192 isoform X1 [Cucurbita moschata]) HSP 1 Score: 547.0 bits (1408), Expect = 1.6e-151 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
BLAST of CmoCh18G000930 vs. NCBI nr
Match: XP_023541291.1 (uncharacterized protein LOC111801509 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 535.8 bits (1379), Expect = 3.6e-148 Identity = 255/260 (98.08%), Postives = 257/260 (98.85%), Query Frame = 0
BLAST of CmoCh18G000930 vs. TAIR 10
Match: AT4G12760.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 244.2 bits (622), Expect = 2.0e-64 Identity = 130/261 (49.81%), Postives = 173/261 (66.28%), Query Frame = 0
BLAST of CmoCh18G000930 vs. TAIR 10
Match: AT4G31330.1 (Protein of unknown function, DUF599 ) HSP 1 Score: 238.4 bits (607), Expect = 1.1e-62 Identity = 122/191 (63.87%), Postives = 156/191 (81.68%), Query Frame = 0
BLAST of CmoCh18G000930 vs. TAIR 10
Match: AT5G10580.1 (Protein of unknown function, DUF599 ) HSP 1 Score: 236.5 bits (602), Expect = 4.3e-62 Identity = 119/195 (61.03%), Postives = 156/195 (80.00%), Query Frame = 0
BLAST of CmoCh18G000930 vs. TAIR 10
Match: AT5G24790.1 (Protein of unknown function, DUF599 ) HSP 1 Score: 214.5 bits (545), Expect = 1.7e-55 Identity = 112/201 (55.72%), Postives = 152/201 (75.62%), Query Frame = 0
BLAST of CmoCh18G000930 vs. TAIR 10
Match: AT5G10580.2 (Protein of unknown function, DUF599 ) HSP 1 Score: 178.7 bits (452), Expect = 1.1e-44 Identity = 90/157 (57.32%), Postives = 122/157 (77.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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