CmoCh18G000810 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G000810
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CDT1-like protein a, chloroplastic
Location	Cmo_Chr18: 547199 .. 551606 (-)
RNA-Seq Expression	CmoCh18G000810
Synteny	CmoCh18G000810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCAATTGGAGGATTTTCCCTCCGTTCCAGTAATCATCTCCTCCGCCCCCTTTCCTTACCAGTTCCTCTTATTACTGCTACAAGCATTGATCCGCCATTGTTGGCTCAAGGTATTTCTCCCCTTTTTCTTCAATTTTTTACCCCTTTAATTCTTGATTTTACCATCAGTTATTCCCAGTAAGGTTTTTGGCTGTAGACCAACTGTCGTATGGAAGGGTTAAATTCTGTAGTAATTTTTTTTGGTTTCACTAATGTTCTTCACGACCATATGCTGTAATTTCTGGATGATTCTCCATTTCAGGCCACGTAACGGGTAATTGTGGAAAGAAATTACTCTATTAATTCACTTCTTCATTATTGTCGAACTGTTAGTTTAATTTCTGATAGTTTTCTGTCGTCTGTTGGTCCTGAAGTGATTTTAATTATGTGGTAGGATTAGGATAAGTTGGGGTAAATTCATATTAATCTTGGTTAATAATTTTAGTTTTCCTATTAGGATTTTTCGTTAATTCTCGAATCCGTGTGATGTATTCGATAGCTTTGATCGATTCTCGGAGCGAATTTTGATCTTTTATCGGTTTCGGCTATGCCAGTTTTTGATTCGATCGGTTGAAGAATGGGTGAAAAAACATGTGAAGATGGTAGCCATGATGTTTCAGCCATTGAAGCTAATCCGGTTCCATTTCCGCCACATAAGGAAGGAGTTTCCGGTAACGTCGTATGTATGACACCGGAGAAGGGAGACGAGTACTCGAAAGGAAAGTTGAAGGAAGGAGGGATCAAACATCAAGAAAAGTGCGTATACTTTTACTAGATGCAACGCCTAAAACATTCGATGTTTAGATCTTGTTTCGATTCTCGAGCTTTGTTAGGCCTACTTCGTTTTTCTTCCTAAACGTTCAAATGTTTTGTTTTAGTTCTTAAAATTTTATATTAAAAACTATTATAGTATGATCGATCATGTCAAACTTGAATGATTCTTAAAACGAACATTTTGTTGCTATAGATTTGACTTAAACTCGATTTGATTATATGCAGATATCAAAGCATTGTAGAGTTCTTTACTTGCTTGATTTCCTCACTAAGGCTGCTTGGAATGCGCAAGAAGCTATCTACGTTTCACAATGTATCCGGTCAGGTGTCGGTTATGAGTAAAAGGTATATCGTAGCGTTCGCTAATGAATCTACTGAGCTTTTTTACTGCTATCTCGTCGCATTTAACCGATCAACGACGATCAATTTATTAATGTTGTGTCTGAACTAATAGTTTCATTGGGTAGGTGAAACAAAACGGTAGGTTGAAAGAAAATAACTCGAAAACGTGTAAAAACTTTTACTAGATTTCGATGCAAATCGAAATTGGAACGATCGAGGAAATGGACCGAATAGGTTCAATTTGATTAGTTTTGTTCGTTCTTGGTTGATCTAAGTTGATTCGTTTCGTTTCTTTCGCAGAAAGTTTTTACACAGACATCTAGCACAAATAGTGTATTTCATTCCAGAAGTTGTGACTATTGATAAAGTGACGATTCATGACAAGAAAACGTCATGCATGAAGTCGGAAATGATAATCAGTCTTCGATTAGATACCGTAAAAGGTCACTCCGAGCATTCCGATTTTCTGGCATTACACAAAGTTTTCGCTTCAAGGGTAGCAAAATTCTTTGTCATGCATCCAGAGGTACTTTCTACATTATAATAAATTGTTCGAGTTTAGAGATATTTTTCTAGCGACCTAGAGATTAGACGGTTTAGATGTCTTCCATGGTCATGAAAATTTCATAGCTTAAACCTTTGCCTCTTAGCTTTGGGGTCGGAAAAACCTCTCGAGCAGTAGCACGGATGGACTATGAGTCATTCCAGGAATGGGCTGCATAGAGATGCCTATTTAACCCTCGGAACCCTGGCCCCGTTCAGGAAATGAGTGAGAGAGTGGAGAGAGATTTCTTTCTATTAGCTAAACAAGAACGGGGATTATATTCTCCGACCCTTCTCCCAACCTCGACCCCACCAAATCCCTACCCGTTCATTTTTTATATCTAAGGTATAAAAATAACTTATATTATATTATTTTCTCCTTAAATATTAGATTGGAATATGGAAATTATCCATTAAAAAATTCTTCGAAATGTGTTTTTATTTTTAAAAAAATTCCTTGTGGGATCCTGATCCTCGTTAATTCTCTACGGAGAATCTCCGTTTTGATTCCTACATAGATAAATGGAGAATTTTGTGGAGATGGGAATCATTATTTTGTTACATTTGTGACCGTTTTACTAGTAAGCATCTCGTAATTTAACTATTTTTCTCATTTGGTTTGGCAACCAGAAAAGTGAAGTTCCGGAGGCGGCGCTACCGGAGCCCTTCAACCGGAGAAACATTACGTTCTCTCTCGATCAATCGACCGATGATTCTTCAGAAAAATCTGAGCCAATATCCGTACAAACCGAGTTGTCCTTTGAAGACCCTTATCCACAGTCAACCTTCAAGAGACATTTCTCTAAGAAAGCTGTTCCTAAAACAGAGCTATCAGAGCCTATTACATCTTCTGTTGTTGGTTTGCCATCTGCTCCAGCTTGTAGTCTGAAAGAGGAGGAAGATAAAAACGATAATTTGCTCGAAGATCTTCCCGTGCAGTCGATCTCGCCTCGAGCCACTGCTAATTCTTCTGAGAGTCCTGTCGTCAAGCCTGCAACGTCTGGTTCTAGCAATATAATAACACAAACCCCGGTACAGTCGACACCGAAAAGATCGATGCTACCGAGTTCTGATGTGAAAATGAGGAAAACTGCAAGTGTAGGAAGTTTATGCAAACCTGCAAAAAGGTTTCTCAACTTTTCTGGCATGGAAGGTGATAATGGTCCATTGAGTTTCAGTGTGGATGATTTGCAATGCTACGATATCCCGGAAAAGAGAGATTTCCATTATGAGCGTTACCGAAAGGATTCTTCGAGTGGACGTGTAACTTGTGAAGAATCATCTTGCTTGCCCGAACTTGTTCGTGTTATCTACAACGTTTTCAAGTCTGTAAATTGCGCTTCGATTACCAAGGAGGAGCTGGTGCACAAGATTATAATGAATAGTCTTGATATTACAGAGCGAAGTATGTATGGTTTTTGTACGTGATTTTGGACATGAATTTGGTTTGAATTTTTGCTCGACTTTTACGTGTTTTCTTGTAGGAGAGGTGGAAGAGCGGATTGAGCAGCTCGAAAAGTCGGTCCCGAGTTGGATCTCCAAGAAATTGACACCGAGCGGCGATGTTACTTTCAGGTGAATCATTCAAATAACTTTTGTAACCTATAGATATGATTCCCAAATGGTCTTCTTTGATACAAGATTTGCCTGATTAGGATTTGTGCATATATAGGAAAAATGCTTCATATAGGTTTCTATTTTGCTGTACATGGGTACTAAGAGGGGTGTAAGTGGATCGGATCGGTTTTTTGAGTCGAAACCTACATTGAACCAACCCGAGGGCAGCCGAGTTTTTAGGAAATAAACAACCGGTCTCCAAAGCTACATTGAACCAACCCGAGGGCAGCCGTGCTTTCGGAGAGTAAAAAACCAGTTTCCAATCCTACATTGAACCAACCCGAGGGCAGCCGAGTTTTTGGGAAATAAAACCGGTTTCCAAACCTACATTGGACCAACCCGAGGGCAGCCGAGTTTTCAGGAAATAAAAAACCGGTATCCAAACCTACGTTGAACCAACCCGAGGGCAGCCGTGCTTTTGGAAAGTAAAAAACTGGTTTCCAAACCTACATTGAACCAACCCGAGGGCAGCCGTGCTTTCGGAAAGTAAAAAACCAGTTTCCAATCCTACATTGAACCAACCCGAGGGCAGCCGAGTTTTCAGGAAATAAACAACCGGTCTCCAAACCTACATTGAACCAACCCGAGGGCAGCCGTGCTTTCAAAAAGTAAAAAACCGGTATCCAAACCTACATTGGACCAACCCGAGGGCAGCTGTGCTTTCAAGAAGTAAAAAACCAGTTTCCAAACCTACATCGAACCAACCCGAGGGCAGCCGAATCGACAAAAGATGTATAGCTTTACTCGAACTGAACCCCACAAACTATTTTTTTCGATTTCGTAATCGAACGAACCATGAATGCATTTGTATAGCTTCTAACAACGCTATCACTCTCTGCAGCATTAGCGCCAAAGAAGACCTAGAATCAGTGGTGGCAAAGACTGCTCCAGTTTGAGAAGCTCCCAACAAAAGGGTCACCACATTGTGTTGTTATGTTTTGTCTGTAATGCTAATTTCAGCGATTGTTCTTTAGAAGTTATTAAAGGCACCTATGTTTTACACATCTTACCTTACATAATACATTCAAATCAAAACAGCCCCACAAGAGTTATTTTTAATCCGTTTTTGGGACTAGGGGTGTTCGAATGACC

mRNA sequence

TTTCAATTGGAGGATTTTCCCTCCGTTCCAGTAATCATCTCCTCCGCCCCCTTTCCTTACCAGTTCCTCTTATTACTGCTACAAGCATTGATCCGCCATTGTTGGCTCAAGTTTTTGATTCGATCGGTTGAAGAATGGGTGAAAAAACATGTGAAGATGGTAGCCATGATGTTTCAGCCATTGAAGCTAATCCGGTTCCATTTCCGCCACATAAGGAAGGAGTTTCCGGTAACGTCGTATGTATGACACCGGAGAAGGGAGACGAGTACTCGAAAGGAAAGTTGAAGGAAGGAGGGATCAAACATCAAGAAAAATATCAAAGCATTGTAGAGTTCTTTACTTGCTTGATTTCCTCACTAAGGCTGCTTGGAATGCGCAAGAAGCTATCTACGTTTCACAATGTATCCGGTCAGGTGTCGGTTATGAGTAAAAGAAAGTTTTTACACAGACATCTAGCACAAATAGTGTATTTCATTCCAGAAGTTGTGACTATTGATAAAGTGACGATTCATGACAAGAAAACGTCATGCATGAAGTCGGAAATGATAATCAGTCTTCGATTAGATACCGTAAAAGGTCACTCCGAGCATTCCGATTTTCTGGCATTACACAAAGTTTTCGCTTCAAGGGTAGCAAAATTCTTTGTCATGCATCCAGAGAAAAGTGAAGTTCCGGAGGCGGCGCTACCGGAGCCCTTCAACCGGAGAAACATTACGTTCTCTCTCGATCAATCGACCGATGATTCTTCAGAAAAATCTGAGCCAATATCCGTACAAACCGAGTTGTCCTTTGAAGACCCTTATCCACAGTCAACCTTCAAGAGACATTTCTCTAAGAAAGCTGTTCCTAAAACAGAGCTATCAGAGCCTATTACATCTTCTGTTGTTGGTTTGCCATCTGCTCCAGCTTGTAGTCTGAAAGAGGAGGAAGATAAAAACGATAATTTGCTCGAAGATCTTCCCGTGCAGTCGATCTCGCCTCGAGCCACTGCTAATTCTTCTGAGAGTCCTGTCGTCAAGCCTGCAACGTCTGGTTCTAGCAATATAATAACACAAACCCCGGTACAGTCGACACCGAAAAGATCGATGCTACCGAGTTCTGATGTGAAAATGAGGAAAACTGCAAGTGTAGGAAGTTTATGCAAACCTGCAAAAAGGTTTCTCAACTTTTCTGGCATGGAAGGTGATAATGGTCCATTGAGTTTCAGTGTGGATGATTTGCAATGCTACGATATCCCGGAAAAGAGAGATTTCCATTATGAGCGTTACCGAAAGGATTCTTCGAGTGGACGTGTAACTTGTGAAGAATCATCTTGCTTGCCCGAACTTGTTCGTGTTATCTACAACGTTTTCAAGTCTGTAAATTGCGCTTCGATTACCAAGGAGGAGCTGGTGCACAAGATTATAATGAATAGTCTTGATATTACAGAGCGAAGAGAGGTGGAAGAGCGGATTGAGCAGCTCGAAAAGTCGGTCCCGAGTTGGATCTCCAAGAAATTGACACCGAGCGGCGATGTTACTTTCAGCATTAGCGCCAAAGAAGACCTAGAATCAGTGGTGGCAAAGACTGCTCCAGTTTGAGAAGCTCCCAACAAAAGGGTCACCACATTGTGTTGTTATGTTTTGTCTGTAATGCTAATTTCAGCGATTGTTCTTTAGAAGTTATTAAAGGCACCTATGTTTTACACATCTTACCTTACATAATACATTCAAATCAAAACAGCCCCACAAGAGTTATTTTTAATCCGTTTTTGGGACTAGGGGTGTTCGAATGACC

Coding sequence (CDS)

ATGGGTGAAAAAACATGTGAAGATGGTAGCCATGATGTTTCAGCCATTGAAGCTAATCCGGTTCCATTTCCGCCACATAAGGAAGGAGTTTCCGGTAACGTCGTATGTATGACACCGGAGAAGGGAGACGAGTACTCGAAAGGAAAGTTGAAGGAAGGAGGGATCAAACATCAAGAAAAATATCAAAGCATTGTAGAGTTCTTTACTTGCTTGATTTCCTCACTAAGGCTGCTTGGAATGCGCAAGAAGCTATCTACGTTTCACAATGTATCCGGTCAGGTGTCGGTTATGAGTAAAAGAAAGTTTTTACACAGACATCTAGCACAAATAGTGTATTTCATTCCAGAAGTTGTGACTATTGATAAAGTGACGATTCATGACAAGAAAACGTCATGCATGAAGTCGGAAATGATAATCAGTCTTCGATTAGATACCGTAAAAGGTCACTCCGAGCATTCCGATTTTCTGGCATTACACAAAGTTTTCGCTTCAAGGGTAGCAAAATTCTTTGTCATGCATCCAGAGAAAAGTGAAGTTCCGGAGGCGGCGCTACCGGAGCCCTTCAACCGGAGAAACATTACGTTCTCTCTCGATCAATCGACCGATGATTCTTCAGAAAAATCTGAGCCAATATCCGTACAAACCGAGTTGTCCTTTGAAGACCCTTATCCACAGTCAACCTTCAAGAGACATTTCTCTAAGAAAGCTGTTCCTAAAACAGAGCTATCAGAGCCTATTACATCTTCTGTTGTTGGTTTGCCATCTGCTCCAGCTTGTAGTCTGAAAGAGGAGGAAGATAAAAACGATAATTTGCTCGAAGATCTTCCCGTGCAGTCGATCTCGCCTCGAGCCACTGCTAATTCTTCTGAGAGTCCTGTCGTCAAGCCTGCAACGTCTGGTTCTAGCAATATAATAACACAAACCCCGGTACAGTCGACACCGAAAAGATCGATGCTACCGAGTTCTGATGTGAAAATGAGGAAAACTGCAAGTGTAGGAAGTTTATGCAAACCTGCAAAAAGGTTTCTCAACTTTTCTGGCATGGAAGGTGATAATGGTCCATTGAGTTTCAGTGTGGATGATTTGCAATGCTACGATATCCCGGAAAAGAGAGATTTCCATTATGAGCGTTACCGAAAGGATTCTTCGAGTGGACGTGTAACTTGTGAAGAATCATCTTGCTTGCCCGAACTTGTTCGTGTTATCTACAACGTTTTCAAGTCTGTAAATTGCGCTTCGATTACCAAGGAGGAGCTGGTGCACAAGATTATAATGAATAGTCTTGATATTACAGAGCGAAGAGAGGTGGAAGAGCGGATTGAGCAGCTCGAAAAGTCGGTCCCGAGTTGGATCTCCAAGAAATTGACACCGAGCGGCGATGTTACTTTCAGCATTAGCGCCAAAGAAGACCTAGAATCAGTGGTGGCAAAGACTGCTCCAGTTTGA

Protein sequence

MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKGKLKEGGIKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIPEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKKAVPKTELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSGSSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVDDLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAPV

Homology

[Close]

BLAST of CmoCh18G000810 vs. ExPASy Swiss-Prot
Match: Q9SJW9 (CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.0e-42
Identity = 151/471 (32.06%), Postives = 234/471 (49.68%), Query Frame = 0


Query: 38  TPEKGDEYSKGKLKEGGIKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVM 97
           +P K    +K   KE   K  EKY+++ +FF  L +S+ L  +R    TF N+S Q+  +
Sbjct: 95  SPSKRKSSNKNAEKE---KLPEKYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHL 154

Query: 98  SKRKFLHRHLAQIVYFIPEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVKGHSE---HSD 157
           ++R+F + HLAQI + +PE + I +V IHD+ T CMK ++ ++L  D V+ + +    S 
Sbjct: 155 TERRFCYSHLAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESK 214

Query: 158 FLALHKVFASRVAKFFVMHPEKSEVPEAALPEPFNRRN-ITFSLDQSTDDSSEKSEPISV 217
            +AL KVF +R+A F   HP+  EVPE  LPEPFNRR  +  S  +    SS   E  S+
Sbjct: 215 KIALRKVFRARLADFVKAHPQGDEVPEEPLPEPFNRRKPVENSNVEVKRVSSLMEEMASI 274

Query: 218 QTELSFEDPYPQSTFKRHFSKKAVPKTELSEPITS--SVVGLPSAPACSLKEEEDKNDNL 277
                F  P   +  K          + L++P +S  ++   P+ P  +  ++     N+
Sbjct: 275 PASKLFSSPITSTPVK--------TTSSLAKPTSSQINIAPTPTKPTSTPAKQTLSEINI 334

Query: 278 LEDLPVQSISPRATANSSESPVVKPATSGSSNIITQTPVQ--STPKRSMLPSSDVKMRKT 337
           L   PV+ +S  A   S+      PA   S+ +IT TP +  STP R M  S   +  K 
Sbjct: 335 L-PTPVKPVSTLAKFPST------PAIIDSTPVITATPPEFASTPARLMSTSLAARPLKR 394

Query: 338 A---------SVGSLCKPAKR--FLNFSGMEGDNGPLSFSVDDLQCYDIPEK-------- 397
           +         S     K  +R   LNF     D   + F+ DD+    +PE+        
Sbjct: 395 SNGHTNPDDISADPPTKLVRRSLSLNFDSYPEDERTMDFT-DDIPIDQVPEEDVSSDDEI 454

Query: 398 --------RDFHYERYRK--DSSSGRVTCEES-----SCLPELVRVIYNVFKSVNCASIT 457
                   R    E+ RK  +  +  ++  +      +CLP+L  VI+ + +S+    IT
Sbjct: 455 LSILPDKLRHAIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVIT 514

Query: 458 KEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSIS 467
           KEELVHKII    DIT+R+EVEE++  L++ VP W+S+K + SGDV   I+
Sbjct: 515 KEELVHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVCIN 546

[Close]

BLAST of CmoCh18G000810 vs. ExPASy Swiss-Prot
Match: Q9M1S9 (CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.3e-29
Identity = 122/453 (26.93%), Postives = 207/453 (45.70%), Query Frame = 0


Query: 45  YSKGKLKEGGIKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLH 104
           +S     E  IK  E+++ + EFF  L +++RLL ++   +T+ N+  ++  ++ R F +
Sbjct: 34  FSSSPKPESVIKLPERFEILEEFFNGLDTAIRLLKLKGSSTTYANICPKIEYLTNRIFSY 93

Query: 105 RHLAQIVYFIPEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVKGHSE--HSDFLALHKVF 164
            HLAQ+ +  PE + + +V    + T CMK  + I L  D +        + ++ L KVF
Sbjct: 94  DHLAQMKHIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAIVVEDTICGTKYMELRKVF 153

Query: 165 ASRVAKFFVMHPEKSEVPEAALPEPFNR-RNITFSLDQSTDDSSEKSEPISVQTELSFED 224
            S++  F   HP K E+P+  LPEPFN  +  ++S   S      K E       +   +
Sbjct: 154 HSKLVDFRKAHP-KDEIPKELLPEPFNSPQRDSYSGIVSVGLGEPKLEVGGFDVHMEEIE 213

Query: 225 PYPQSTFKRHFSKKAVPKTELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSIS 284
              Q         K +P + LS  I S +V  P     +  ++      L+   P   +S
Sbjct: 214 QEEQDV------NKVIPDSTLSH-IESRIVETPVKDLSTPSKDLSTPIRLMSATPTLQLS 273

Query: 285 PRA-----------TANSSESPVVKPATSGSSNIITQTPVQSTPKRSMLPSSDVKMRKTA 344
            R            +  S+ S    P+ S + +   +  ++     +      +   +  
Sbjct: 274 KRCIELTPEGGDDNSLRSTNSLARGPSRSLNFDTFEEDAIEKDDIGNESDDKGINYEEDG 333

Query: 345 SVGSLCKPAKRFLNFSGMEGDNGPLSFSVDDLQCYDIPEKRDFHYERYRKDSSSGRVTCE 404
            + S+  P+ R LNF  +E +    +   DD+      EK ++  +    D S  +   E
Sbjct: 334 LLQSVKGPS-RSLNFDTLEEE----TIVKDDISNESGDEKSNYEGDNASDDDSLLQSMIE 393

Query: 405 ------ESSCLPELVRVIYNVFKSVNCASITKEELVHKIIMNSLDITERREVEERIEQLE 464
                 E   LP+LV +I+ VF S N   ITKEEL++KII N ++IT+RREVEE++  + 
Sbjct: 394 RPKTEPEKHNLPQLVNLIHRVFHSTNRTVITKEELLYKIIANQINITDRREVEEQLSLML 453

Query: 465 KSVPSWISKKLTPSGDVTFSISAKEDLESVVAK 478
           + VP WIS+    SGD+   I+     E+V A+
Sbjct: 454 QLVPDWISETKASSGDLLVRINKMSTAETVRAR 473

[Close]

BLAST of CmoCh18G000810 vs. ExPASy TrEMBL
Match: A0A6J1GR86 (CDT1-like protein a, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456741 PE=3 SV=1)

HSP 1 Score: 938.3 bits (2424), Expect = 1.2e-269
Identity = 481/481 (100.00%), Postives = 481/481 (100.00%), Query Frame = 0


Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKGKLKEGGIKHQEK 60
           MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKGKLKEGGIKHQEK
Sbjct: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKGKLKEGGIKHQEK 60

Query: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIPEVVTI 120
           YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIPEVVTI
Sbjct: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIPEVVTI 120

Query: 121 DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180
           DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP
Sbjct: 121 DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180

Query: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKKAVPKT 240
           EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKKAVPKT
Sbjct: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKKAVPKT 240

Query: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG 300
           ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG
Sbjct: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG 300

Query: 301 SSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360
           SSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD
Sbjct: 301 SSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360

Query: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420
           DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV
Sbjct: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420

Query: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480
           HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP
Sbjct: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480

Query: 481 V 482
           V
Sbjct: 481 V 481

[Close]

BLAST of CmoCh18G000810 vs. ExPASy TrEMBL
Match: A0A6J1K5V4 (CDT1-like protein a, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111490341 PE=3 SV=1)

HSP 1 Score: 870.5 bits (2248), Expect = 3.2e-249
Identity = 454/481 (94.39%), Postives = 460/481 (95.63%), Query Frame = 0


Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKGKLKEGGIKHQEK 60
           MGEKTCEDGSHDVSAIEANPVPFPP KEGVSGNV CMTPEKGDEY KGKLKEGGIKHQEK
Sbjct: 1   MGEKTCEDGSHDVSAIEANPVPFPPQKEGVSGNVGCMTPEKGDEYLKGKLKEGGIKHQEK 60

Query: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIPEVVTI 120
           YQSIVE FTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVY IPEVVTI
Sbjct: 61  YQSIVELFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTI 120

Query: 121 DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180
           DKVTIHDKKTSCMKSEMIISLR DTVKGHSE+SDFLALHKVFASRVAKFFVMHPEKSEVP
Sbjct: 121 DKVTIHDKKTSCMKSEMIISLRFDTVKGHSEYSDFLALHKVFASRVAKFFVMHPEKSEVP 180

Query: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKKAVPKT 240
           EAALPEPFNRRNITFSL+QST +SS  S PISVQTELSFED  PQST KRHFSKKAVPKT
Sbjct: 181 EAALPEPFNRRNITFSLEQSTYNSS--SVPISVQTELSFEDLCPQSTCKRHFSKKAVPKT 240

Query: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG 300
           ELSEPITSSV GLPSAPACSLKEEED NDNLLEDLPVQSISPRATANSSESPVVKPATS 
Sbjct: 241 ELSEPITSSVAGLPSAPACSLKEEEDNNDNLLEDLPVQSISPRATANSSESPVVKPATSA 300

Query: 301 SSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360
           SSNI+TQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD
Sbjct: 301 SSNIMTQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360

Query: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420
           DLQCYDI EKR+FHYERYR DSSSG VTCEESSCLPELVRVIYNVFKSVNCASITKEELV
Sbjct: 361 DLQCYDIREKRNFHYERYRTDSSSGGVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420

Query: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480
           HKIIMNSLDITE+REVEERIEQLEKSVPSWISKK TPSGDVTFSIS KEDLESVVAKTAP
Sbjct: 421 HKIIMNSLDITEQREVEERIEQLEKSVPSWISKKSTPSGDVTFSISGKEDLESVVAKTAP 479

Query: 481 V 482
           V
Sbjct: 481 V 479

[Close]

BLAST of CmoCh18G000810 vs. ExPASy TrEMBL
Match: A0A6J1C8S9 (CDT1-like protein a, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009026 PE=3 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 3.6e-176
Identity = 329/492 (66.87%), Postives = 388/492 (78.86%), Query Frame = 0


Query: 1   MGEKTCEDGSHDVSAIEANP------VPF--PPHKEGVSG------NVVCMTPEKGDEYS 60
           MGEKT ED   +VSAIE NP      +PF  PP K G+SG      N+ CMTPEK DEY 
Sbjct: 1   MGEKTFEDDGQNVSAIETNPSTDKSKIPFNVPPQKGGISGVQNSDCNIACMTPEKADEYL 60

Query: 61  KGKLKEGGIKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRH 120
           KGKLKE  IK QEK Q+IV  F+C+ISSLRLLG+RKKLSTF N+S  VS M+KRKF HRH
Sbjct: 61  KGKLKEEEIKVQEKCQTIVRLFSCMISSLRLLGLRKKLSTFKNISCMVSAMTKRKFFHRH 120

Query: 121 LAQIVYFIPEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRV 180
           LAQIVY IPE V I+K+ IHD +T CMK EM+ISL+LD V+GHSEHSDFLAL  +F SRV
Sbjct: 121 LAQIVYIIPEAVNIEKMMIHDMRTLCMKPEMVISLQLDIVEGHSEHSDFLALGTLFTSRV 180

Query: 181 AKFFVMHPEKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQS 240
            K+FV+HPEKSEVPE  LPEPFN+RN+  SL QS+D SSEKS+ ISV+T   FE+ YP S
Sbjct: 181 KKYFVLHPEKSEVPEGPLPEPFNQRNLMLSLYQSSDSSSEKSQQISVETNSYFEESYPPS 240

Query: 241 TFKRHFSKKAVPKTELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATA 300
           +FKR+FSK+AVPK E+SEP+  S V LPS  AC L  E+D ND+LLED P QS+SP+A  
Sbjct: 241 SFKRYFSKQAVPKAEISEPVAPSAVDLPSTAACGL-TEQDSNDHLLEDFPAQSVSPQAAD 300

Query: 301 NSSESPVVKPATSGSSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFS 360
            SSES + KP TS SS+ +TQTP QSTPKRSMLPSSDVKM+   S GSL KPAKRFLNFS
Sbjct: 301 ESSESSLAKPVTSASSSTMTQTPAQSTPKRSMLPSSDVKMKIVKSTGSLSKPAKRFLNFS 360

Query: 361 GMEGDNGPLSFSVDDLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVF 420
           GMEGD G  SFS+DD QCYDI  K+DFH++ + + + +  V C+ESSCLPELVRVIY++F
Sbjct: 361 GMEGDIGTSSFSLDDFQCYDIHRKKDFHHDGHCQKNRTSGVICQESSCLPELVRVIYDIF 420

Query: 421 KSVNCASITKEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSIS 479
           KSVNC++ITKEELVHK+IMNSLD+TERREVEE+IE+LEK VP WIS+KLT SGD+TFSI+
Sbjct: 421 KSVNCSNITKEELVHKVIMNSLDVTERREVEEQIERLEKLVPDWISRKLTASGDITFSIN 480

[Close]

BLAST of CmoCh18G000810 vs. ExPASy TrEMBL
Match: A0A5D3BIY5 (CDT1-like protein a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002810 PE=3 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 7.0e-172
Identity = 338/491 (68.84%), Postives = 391/491 (79.63%), Query Frame = 0


Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSG------NVVCMTPEKGDEYSKGKLKEGG 60
           MGEKT +DG  +VSAIE NP       EG+ G      N+ CMTPEK DEY KGKLKE  
Sbjct: 1   MGEKTFDDGGLNVSAIETNP-SMDKQIEGIHGNQNSESNIACMTPEKADEYLKGKLKEEE 60

Query: 61  IKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFI 120
           IK QEK Q+IVEFFTCL SS+RLL MRKK+STFHNVS QVSVM+KR FL +HLAQIVY I
Sbjct: 61  IKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSRQVSVMTKRMFLDKHLAQIVYII 120

Query: 121 PEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHP 180
           PE V IDKV IHDKKTSCMK EMIISL+LD VKGHSEHSDFLALHKVFASRV K+F +H 
Sbjct: 121 PEAVNIDKVMIHDKKTSCMKPEMIISLQLDVVKGHSEHSDFLALHKVFASRVLKYFAVHT 180

Query: 181 EKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSK 240
           EK+EVPE ALP+PFNRR I FSLDQ +D+S E+S P S+ ++L+ E+  P S+ KRHFSK
Sbjct: 181 EKNEVPEGALPKPFNRRKI-FSLDQLSDNSPERSRPTSIDSDLTLEELCPHSSLKRHFSK 240

Query: 241 KAVPKTELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPR-ATANSSESPV 300
           K++   E+SEP+ SS+V  PS PACS  +EED ND LLED+P  ++ P+ A ANSSESP+
Sbjct: 241 KSISSVEISEPVASSIVFSPSIPACSSLKEEDTNDKLLEDIP--TLPPQVAAANSSESPL 300

Query: 301 VKPA-TSGSSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDN 360
           VK   +S SS+I+TQTPVQ TPKRSMLPSS+VK RK ASVGS+CKPAKRFLNFSGMEGDN
Sbjct: 301 VKSVLSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDN 360

Query: 361 GPLSFSVDDLQCYDIPEKRDFHYERYRKDSSSGR--VTCEESSCLPELVRVIYNVFKSVN 420
           G  S  VDDLQ   IP K++F  E + K + + +  ++ E SSCLPELV V+YN+FKSVN
Sbjct: 361 GKSSLGVDDLQ---IPGKKNFLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVN 420

Query: 421 CASITKEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKED 480
           C+SITKEELVHKIIMN LDITERREVEERIEQLEK VP+WISKKLT SGDVTFSI+ KED
Sbjct: 421 CSSITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKED 480

Query: 481 LESVVAKTAPV 482
           LESVVAKTA +
Sbjct: 481 LESVVAKTARI 484

[Close]

BLAST of CmoCh18G000810 vs. ExPASy TrEMBL
Match: A0A1S3ATS0 (CDT1-like protein a, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482615 PE=3 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 7.0e-172
Identity = 338/491 (68.84%), Postives = 391/491 (79.63%), Query Frame = 0


Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSG------NVVCMTPEKGDEYSKGKLKEGG 60
           MGEKT +DG  +VSAIE NP       EG+ G      N+ CMTPEK DEY KGKLKE  
Sbjct: 1   MGEKTFDDGGLNVSAIETNP-SMDKQIEGIHGNQNSESNIACMTPEKADEYLKGKLKEEE 60

Query: 61  IKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFI 120
           IK QEK Q+IVEFFTCL SS+RLL MRKK+STFHNVS QVSVM+KR FL +HLAQIVY I
Sbjct: 61  IKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSRQVSVMTKRMFLDKHLAQIVYII 120

Query: 121 PEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHP 180
           PE V IDKV IHDKKTSCMK EMIISL+LD VKGHSEHSDFLALHKVFASRV K+F +H 
Sbjct: 121 PEAVNIDKVMIHDKKTSCMKPEMIISLQLDVVKGHSEHSDFLALHKVFASRVLKYFAVHT 180

Query: 181 EKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSK 240
           EK+EVPE ALP+PFNRR I FSLDQ +D+S E+S P S+ ++L+ E+  P S+ KRHFSK
Sbjct: 181 EKNEVPEGALPKPFNRRKI-FSLDQLSDNSPERSRPTSIDSDLTLEELCPHSSLKRHFSK 240

Query: 241 KAVPKTELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPR-ATANSSESPV 300
           K++   E+SEP+ SS+V  PS PACS  +EED ND LLED+P  ++ P+ A ANSSESP+
Sbjct: 241 KSISSVEISEPVASSIVFSPSIPACSSLKEEDTNDKLLEDIP--TLPPQVAAANSSESPL 300

Query: 301 VKPA-TSGSSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDN 360
           VK   +S SS+I+TQTPVQ TPKRSMLPSS+VK RK ASVGS+CKPAKRFLNFSGMEGDN
Sbjct: 301 VKSVLSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDN 360

Query: 361 GPLSFSVDDLQCYDIPEKRDFHYERYRKDSSSGR--VTCEESSCLPELVRVIYNVFKSVN 420
           G  S  VDDLQ   IP K++F  E + K + + +  ++ E SSCLPELV V+YN+FKSVN
Sbjct: 361 GKSSLGVDDLQ---IPGKKNFLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVN 420

Query: 421 CASITKEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKED 480
           C+SITKEELVHKIIMN LDITERREVEERIEQLEK VP+WISKKLT SGDVTFSI+ KED
Sbjct: 421 CSSITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKED 480

Query: 481 LESVVAKTAPV 482
           LESVVAKTA +
Sbjct: 481 LESVVAKTARI 484

[Close]

BLAST of CmoCh18G000810 vs. NCBI nr
Match: XP_022954488.1 (CDT1-like protein a, chloroplastic [Cucurbita moschata])

HSP 1 Score: 938.3 bits (2424), Expect = 2.6e-269
Identity = 481/481 (100.00%), Postives = 481/481 (100.00%), Query Frame = 0


Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKGKLKEGGIKHQEK 60
           MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKGKLKEGGIKHQEK
Sbjct: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKGKLKEGGIKHQEK 60

Query: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIPEVVTI 120
           YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIPEVVTI
Sbjct: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIPEVVTI 120

Query: 121 DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180
           DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP
Sbjct: 121 DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180

Query: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKKAVPKT 240
           EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKKAVPKT
Sbjct: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKKAVPKT 240

Query: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG 300
           ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG
Sbjct: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG 300

Query: 301 SSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360
           SSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD
Sbjct: 301 SSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360

Query: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420
           DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV
Sbjct: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420

Query: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480
           HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP
Sbjct: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480

Query: 481 V 482
           V
Sbjct: 481 V 481

[Close]

BLAST of CmoCh18G000810 vs. NCBI nr
Match: KAG7012181.1 (CDT1-like protein a, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 924.1 bits (2387), Expect = 5.0e-265
Identity = 475/481 (98.75%), Postives = 477/481 (99.17%), Query Frame = 0


Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKGKLKEGGIKHQEK 60
           MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSK K KEGGIKHQEK
Sbjct: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKEKSKEGGIKHQEK 60

Query: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIPEVVTI 120
           YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVY IPEVVTI
Sbjct: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTI 120

Query: 121 DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180
           DKVTIHDKKTSCMKSEMIISLRLDTV+GHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP
Sbjct: 121 DKVTIHDKKTSCMKSEMIISLRLDTVEGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180

Query: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKKAVPKT 240
           EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFED YP+STFKRHFSKKAVPKT
Sbjct: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDLYPESTFKRHFSKKAVPKT 240

Query: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG 300
           ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG
Sbjct: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG 300

Query: 301 SSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360
           SSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD
Sbjct: 301 SSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360

Query: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420
           DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV
Sbjct: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420

Query: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480
           HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP
Sbjct: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480

Query: 481 V 482
           V
Sbjct: 481 V 481

[Close]

BLAST of CmoCh18G000810 vs. NCBI nr
Match: KAG6572997.1 (CDT1-like protein a, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 922.9 bits (2384), Expect = 1.1e-264
Identity = 474/481 (98.54%), Postives = 477/481 (99.17%), Query Frame = 0


Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKGKLKEGGIKHQEK 60
           MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSK K KEGGIKHQEK
Sbjct: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKEKSKEGGIKHQEK 60

Query: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIPEVVTI 120
           YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVY IPEVVTI
Sbjct: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTI 120

Query: 121 DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180
           DKVTIHDKKTSCMKSEMIISLRLDTV+GHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP
Sbjct: 121 DKVTIHDKKTSCMKSEMIISLRLDTVEGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180

Query: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKKAVPKT 240
           EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFED YP+STFKRHFSKKAVPKT
Sbjct: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDLYPESTFKRHFSKKAVPKT 240

Query: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG 300
           ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG
Sbjct: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG 300

Query: 301 SSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360
           SSNI+TQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD
Sbjct: 301 SSNIMTQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360

Query: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420
           DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV
Sbjct: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420

Query: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480
           HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP
Sbjct: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480

Query: 481 V 482
           V
Sbjct: 481 V 481

[Close]

BLAST of CmoCh18G000810 vs. NCBI nr
Match: XP_023541265.1 (CDT1-like protein a, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 897.5 bits (2318), Expect = 5.0e-257
Identity = 465/481 (96.67%), Postives = 470/481 (97.71%), Query Frame = 0


Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKGKLKEGGIKHQEK 60
           MGEKTCEDGSHDVSAIEA  VPFPPHKEGVSGNVVCMTPEKGDEYSKGK KEGGIKHQEK
Sbjct: 1   MGEKTCEDGSHDVSAIEAKRVPFPPHKEGVSGNVVCMTPEKGDEYSKGKSKEGGIKHQEK 60

Query: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIPEVVTI 120
           YQSIVEFFTCLISSLRLLGMRKK STFHNVSGQVSVMSKRKFLHRHLAQIVY IPEVVTI
Sbjct: 61  YQSIVEFFTCLISSLRLLGMRKKPSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTI 120

Query: 121 DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180
           DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP
Sbjct: 121 DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180

Query: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKKAVPKT 240
           EAALPEPFNRRNITFSL+QSTD+SSEKSEPISVQTELSFED YPQSTFKRHFSKKAVPKT
Sbjct: 181 EAALPEPFNRRNITFSLEQSTDNSSEKSEPISVQTELSFEDLYPQSTFKRHFSKKAVPKT 240

Query: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG 300
           ELSEPITSSVVGLPSAPAC +KEEED NDNLLEDLPVQSIS RATANSSESPVVKPATS 
Sbjct: 241 ELSEPITSSVVGLPSAPAC-VKEEEDNNDNLLEDLPVQSISSRATANSSESPVVKPATSA 300

Query: 301 SSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360
           SSNI+TQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD
Sbjct: 301 SSNIMTQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360

Query: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420
           DLQCYDIPEKRDFH+E YRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV
Sbjct: 361 DLQCYDIPEKRDFHHEPYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420

Query: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480
           HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP
Sbjct: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480

Query: 481 V 482
           V
Sbjct: 481 V 480

[Close]

BLAST of CmoCh18G000810 vs. NCBI nr
Match: XP_022994693.1 (CDT1-like protein a, chloroplastic [Cucurbita maxima])

HSP 1 Score: 870.5 bits (2248), Expect = 6.5e-249
Identity = 454/481 (94.39%), Postives = 460/481 (95.63%), Query Frame = 0


Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKGKLKEGGIKHQEK 60
           MGEKTCEDGSHDVSAIEANPVPFPP KEGVSGNV CMTPEKGDEY KGKLKEGGIKHQEK
Sbjct: 1   MGEKTCEDGSHDVSAIEANPVPFPPQKEGVSGNVGCMTPEKGDEYLKGKLKEGGIKHQEK 60

Query: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIPEVVTI 120
           YQSIVE FTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVY IPEVVTI
Sbjct: 61  YQSIVELFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTI 120

Query: 121 DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180
           DKVTIHDKKTSCMKSEMIISLR DTVKGHSE+SDFLALHKVFASRVAKFFVMHPEKSEVP
Sbjct: 121 DKVTIHDKKTSCMKSEMIISLRFDTVKGHSEYSDFLALHKVFASRVAKFFVMHPEKSEVP 180

Query: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKKAVPKT 240
           EAALPEPFNRRNITFSL+QST +SS  S PISVQTELSFED  PQST KRHFSKKAVPKT
Sbjct: 181 EAALPEPFNRRNITFSLEQSTYNSS--SVPISVQTELSFEDLCPQSTCKRHFSKKAVPKT 240

Query: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSG 300
           ELSEPITSSV GLPSAPACSLKEEED NDNLLEDLPVQSISPRATANSSESPVVKPATS 
Sbjct: 241 ELSEPITSSVAGLPSAPACSLKEEEDNNDNLLEDLPVQSISPRATANSSESPVVKPATSA 300

Query: 301 SSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360
           SSNI+TQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD
Sbjct: 301 SSNIMTQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360

Query: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420
           DLQCYDI EKR+FHYERYR DSSSG VTCEESSCLPELVRVIYNVFKSVNCASITKEELV
Sbjct: 361 DLQCYDIREKRNFHYERYRTDSSSGGVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420

Query: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480
           HKIIMNSLDITE+REVEERIEQLEKSVPSWISKK TPSGDVTFSIS KEDLESVVAKTAP
Sbjct: 421 HKIIMNSLDITEQREVEERIEQLEKSVPSWISKKSTPSGDVTFSISGKEDLESVVAKTAP 479

Query: 481 V 482
           V
Sbjct: 481 V 479

[Close]

BLAST of CmoCh18G000810 vs. TAIR 10
Match: AT2G31270.1 (homolog of yeast CDT1 A )

HSP 1 Score: 173.7 bits (439), Expect = 3.6e-43
Identity = 151/471 (32.06%), Postives = 234/471 (49.68%), Query Frame = 0


Query: 38  TPEKGDEYSKGKLKEGGIKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVM 97
           +P K    +K   KE   K  EKY+++ +FF  L +S+ L  +R    TF N+S Q+  +
Sbjct: 95  SPSKRKSSNKNAEKE---KLPEKYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHL 154

Query: 98  SKRKFLHRHLAQIVYFIPEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVKGHSE---HSD 157
           ++R+F + HLAQI + +PE + I +V IHD+ T CMK ++ ++L  D V+ + +    S 
Sbjct: 155 TERRFCYSHLAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESK 214

Query: 158 FLALHKVFASRVAKFFVMHPEKSEVPEAALPEPFNRRN-ITFSLDQSTDDSSEKSEPISV 217
            +AL KVF +R+A F   HP+  EVPE  LPEPFNRR  +  S  +    SS   E  S+
Sbjct: 215 KIALRKVFRARLADFVKAHPQGDEVPEEPLPEPFNRRKPVENSNVEVKRVSSLMEEMASI 274

Query: 218 QTELSFEDPYPQSTFKRHFSKKAVPKTELSEPITS--SVVGLPSAPACSLKEEEDKNDNL 277
                F  P   +  K          + L++P +S  ++   P+ P  +  ++     N+
Sbjct: 275 PASKLFSSPITSTPVK--------TTSSLAKPTSSQINIAPTPTKPTSTPAKQTLSEINI 334

Query: 278 LEDLPVQSISPRATANSSESPVVKPATSGSSNIITQTPVQ--STPKRSMLPSSDVKMRKT 337
           L   PV+ +S  A   S+      PA   S+ +IT TP +  STP R M  S   +  K 
Sbjct: 335 L-PTPVKPVSTLAKFPST------PAIIDSTPVITATPPEFASTPARLMSTSLAARPLKR 394

Query: 338 A---------SVGSLCKPAKR--FLNFSGMEGDNGPLSFSVDDLQCYDIPEK-------- 397
           +         S     K  +R   LNF     D   + F+ DD+    +PE+        
Sbjct: 395 SNGHTNPDDISADPPTKLVRRSLSLNFDSYPEDERTMDFT-DDIPIDQVPEEDVSSDDEI 454

Query: 398 --------RDFHYERYRK--DSSSGRVTCEES-----SCLPELVRVIYNVFKSVNCASIT 457
                   R    E+ RK  +  +  ++  +      +CLP+L  VI+ + +S+    IT
Sbjct: 455 LSILPDKLRHAIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVIT 514

Query: 458 KEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSIS 467
           KEELVHKII    DIT+R+EVEE++  L++ VP W+S+K + SGDV   I+
Sbjct: 515 KEELVHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVCIN 546

[Close]

BLAST of CmoCh18G000810 vs. TAIR 10
Match: AT3G54710.1 (homolog of yeast CDT1 B homolog of yeast CDT1 B )

HSP 1 Score: 132.5 bits (332), Expect = 9.1e-31
Identity = 122/453 (26.93%), Postives = 207/453 (45.70%), Query Frame = 0


Query: 45  YSKGKLKEGGIKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLH 104
           +S     E  IK  E+++ + EFF  L +++RLL ++   +T+ N+  ++  ++ R F +
Sbjct: 34  FSSSPKPESVIKLPERFEILEEFFNGLDTAIRLLKLKGSSTTYANICPKIEYLTNRIFSY 93

Query: 105 RHLAQIVYFIPEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVKGHSE--HSDFLALHKVF 164
            HLAQ+ +  PE + + +V    + T CMK  + I L  D +        + ++ L KVF
Sbjct: 94  DHLAQMKHIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAIVVEDTICGTKYMELRKVF 153

Query: 165 ASRVAKFFVMHPEKSEVPEAALPEPFNR-RNITFSLDQSTDDSSEKSEPISVQTELSFED 224
            S++  F   HP K E+P+  LPEPFN  +  ++S   S      K E       +   +
Sbjct: 154 HSKLVDFRKAHP-KDEIPKELLPEPFNSPQRDSYSGIVSVGLGEPKLEVGGFDVHMEEIE 213

Query: 225 PYPQSTFKRHFSKKAVPKTELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSIS 284
              Q         K +P + LS  I S +V  P     +  ++      L+   P   +S
Sbjct: 214 QEEQDV------NKVIPDSTLSH-IESRIVETPVKDLSTPSKDLSTPIRLMSATPTLQLS 273

Query: 285 PRA-----------TANSSESPVVKPATSGSSNIITQTPVQSTPKRSMLPSSDVKMRKTA 344
            R            +  S+ S    P+ S + +   +  ++     +      +   +  
Sbjct: 274 KRCIELTPEGGDDNSLRSTNSLARGPSRSLNFDTFEEDAIEKDDIGNESDDKGINYEEDG 333

Query: 345 SVGSLCKPAKRFLNFSGMEGDNGPLSFSVDDLQCYDIPEKRDFHYERYRKDSSSGRVTCE 404
            + S+  P+ R LNF  +E +    +   DD+      EK ++  +    D S  +   E
Sbjct: 334 LLQSVKGPS-RSLNFDTLEEE----TIVKDDISNESGDEKSNYEGDNASDDDSLLQSMIE 393

Query: 405 ------ESSCLPELVRVIYNVFKSVNCASITKEELVHKIIMNSLDITERREVEERIEQLE 464
                 E   LP+LV +I+ VF S N   ITKEEL++KII N ++IT+RREVEE++  + 
Sbjct: 394 RPKTEPEKHNLPQLVNLIHRVFHSTNRTVITKEELLYKIIANQINITDRREVEEQLSLML 453

Query: 465 KSVPSWISKKLTPSGDVTFSISAKEDLESVVAK 478
           + VP WIS+    SGD+   I+     E+V A+
Sbjct: 454 QLVPDWISETKASSGDLLVRINKMSTAETVRAR 473

The following BLAST results are available for this feature:

BLAST of CmoCh18G000810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJW9	5.0e-42	32.06	CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1...	[more]
Q9M1S9	1.3e-29	26.93	CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1	[more]

BLAST of CmoCh18G000810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GR86	1.2e-269	100.00	CDT1-like protein a, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456741...	[more]
A0A6J1K5V4	3.2e-249	94.39	CDT1-like protein a, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111490341 P...	[more]
A0A6J1C8S9	3.6e-176	66.87	CDT1-like protein a, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11100902...	[more]
A0A5D3BIY5	7.0e-172	68.84	CDT1-like protein a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G...	[more]
A0A1S3ATS0	7.0e-172	68.84	CDT1-like protein a, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of CmoCh18G000810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954488.1	2.6e-269	100.00	CDT1-like protein a, chloroplastic [Cucurbita moschata]	[more]
KAG7012181.1	5.0e-265	98.75	CDT1-like protein a, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6572997.1	1.1e-264	98.54	CDT1-like protein a, chloroplastic, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023541265.1	5.0e-257	96.67	CDT1-like protein a, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022994693.1	6.5e-249	94.39	CDT1-like protein a, chloroplastic [Cucurbita maxima]	[more]

BLAST of CmoCh18G000810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31270.1	3.6e-43	32.06	homolog of yeast CDT1 A	[more]
AT3G54710.1	9.1e-31	26.93	homolog of yeast CDT1 B homolog of yeast CDT1 B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014939	CDT1 Geminin-binding domain-like	SMART	SM01075	CDT1_2	coord: 59..186 e-value: 3.7E-5 score: 29.7
IPR014939	CDT1 Geminin-binding domain-like	PFAM	PF08839	CDT1	coord: 60..128 e-value: 4.5E-9 score: 36.8
IPR038090	DNA replication factor Cdt1, C-terminal WH domain superfamily	GENE3D	1.10.10.1420		coord: 388..480 e-value: 1.9E-18 score: 68.4
IPR032054	DNA replication factor Cdt1, C-terminal	PFAM	PF16679	CDT1_C	coord: 392..453 e-value: 4.7E-7 score: 30.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..220
None	No IPR available	PANTHER	PTHR28637:SF13	EXPRESSED PROTEIN	coord: 30..478
None	No IPR available	PANTHER	PTHR28637	DNA REPLICATION FACTOR CDT1	coord: 30..478
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 59..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G000810.1	CmoCh18G000810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000076	DNA replication checkpoint signaling
biological_process	GO:0071163	DNA replication preinitiation complex assembly
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0030174	regulation of DNA-dependent DNA replication initiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0070182	DNA polymerase binding