CmoCh17G013590 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G013590
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	LITAF domain-containing protein
Location	Cmo_Chr17: 10570933 .. 10572668 (+)
RNA-Seq Expression	CmoCh17G013590
Synteny	CmoCh17G013590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAAGAACGATGAGCCGGTCGTCGGAATTCCATTCTATGTTGGCAATAACGCTTATCAGGCTGGACAGATCCCTCCGAACGCCATCTTTGGCCATCCCCAGGGAGTTCCTATCCACCAAACCATGTACCGCGACACTCCTGCTCCTTACTGCTGTGTTTATTGTGGAAATTCCGGTCTCACCTCCATCAGGTTCCTTTTCTACCTTCTCTCTATCTCTGCGTCTAGGTTTTTTTTTTTTGTCTCCTTTCTTTGATCTATTCGAAATTCTGTGTCTAATTAGTCCGGTAGTTGTCTTTTTCTGTTTTAACCGATGATTATCCCATTGTTTGTTTTACTTGAATCGTTAATTCAGGAACGGTTTTGGGCATTGAAATTTTTTACTTCGTTTATTGGAACTTGTATTTGATTGATCAATGGGCCTTCCCCATTTTTGTCTTTCACCTAATTTTCTTCTTTAGGATTAGAATCACTTGTCGCTATTGAATTTCGTGGGTCGTGAAACTTTGCTTACATCATAAGGCAGGAACTGTCTGGTTGTTGCTGCTATGCTCTAACAATTAACTGAAATGATTTGAGTGACTTTTACCCTATATACCCGGAATGTCTTTGAAATAGTTGTTGCTTGGGTGTTTAAGTACACTTCTTCGTTTACATTGGTTTCAAAATCGTCTGACGCCCAACTTTACTGTTGTCCAATTATGTTTTACCAGGTTGTGGTCGTTTTGAGGGATTGCTGTTTGTGTTTGATTTCTTACATAAAACTAATTGGATCAAGGGCAGTTACTTTGTTTTCAAATTTGTATAAACACTCGGTCAGAGCGCAGGTGCAAGGTGGTACAAACTCAGGGGCTCGCAAATGGTTTACACCCATACAAAGTTTTGTTTGGCTTTAAATCATTTTCATTTTTAGAAACATTCAAATTGCATACTTTTACATAAGATGCTCCCTTCTTTAAAATAGCATTATTGTTAGTGGGGACACTTGAAATTTTACCATTCAGAACTTATCAATCAATCTAATTTCTCGGTGTGCGTTAAAAATTAATGCTCTGTTCATTCTTTCTTCAACGGCAACAATGAAAATTACAATAATAGCATAAATCAAATAGGTTATCATGTTACAATTTCAGTTTTTAATGAGAGTAGCCTAAACAAATATAAGACCAAATGTTGGGATTGTATATACACTGACAAAAATGTTGGTACTCGTATGTTCAAGACTTGCTGTAGCAGAGCACCAATATGATTTATCATGGTTAGGCAGCAAAATTTTGTGTATAATTATCTGGACATAGTAGATATAGGAGGGGAGAGAGGTGGATGTCGTATATTTATGTTAACAGTCAAATAATTATGCCTCTTCATATGGTTGTGATGCTTTCATGATCTCTGCAGATCGAAGATAAGTTTAGCTGCTGTCGTTGGTTGTATGATGCCATTTATGTTGGGAGTATGCTTTCTTTGTCCTTCAATGGATTGCCTTTGGCATAAGTATCACTATTGTCCCAGCTGCAAGGAAAAGGTATGACTATTTCCTGTCATTTTTAATTCTTTCAGTTGCTTCTTCTTATCTGCATATTGGTTATTTGAGACCTTGCTCTATTATGGATAATTGGAGTAATTAATGATACTATCATATTTCCTTAGGTTGGTGATTTTGAGAAATCGGATGTGTGTGCTGTGATGGATCCTCCACACTGGACACAGCCAAGCTTTGCATTGCCTGCCTGA

mRNA sequence

ATGTCGAAGAACGATGAGCCGGTCGTCGGAATTCCATTCTATGTTGGCAATAACGCTTATCAGGCTGGACAGATCCCTCCGAACGCCATCTTTGGCCATCCCCAGGGAGTTCCTATCCACCAAACCATGTACCGCGACACTCCTGCTCCTTACTGCTGTGTTTATTGTGGAAATTCCGGTCTCACCTCCATCAGGTTCCTTTTCTACCTTCTCTCTATCTCTGCGTCTAGATCGAAGATAAGTTTAGCTGCTGTCGTTGGTTGTATGATGCCATTTATGTTGGGAGTATGCTTTCTTTGTCCTTCAATGGATTGCCTTTGGCATAAGTATCACTATTGTCCCAGCTGCAAGGAAAAGGTTGGTGATTTTGAGAAATCGGATGTGTGTGCTGTGATGGATCCTCCACACTGGACACAGCCAAGCTTTGCATTGCCTGCCTGA

Coding sequence (CDS)

ATGTCGAAGAACGATGAGCCGGTCGTCGGAATTCCATTCTATGTTGGCAATAACGCTTATCAGGCTGGACAGATCCCTCCGAACGCCATCTTTGGCCATCCCCAGGGAGTTCCTATCCACCAAACCATGTACCGCGACACTCCTGCTCCTTACTGCTGTGTTTATTGTGGAAATTCCGGTCTCACCTCCATCAGGTTCCTTTTCTACCTTCTCTCTATCTCTGCGTCTAGATCGAAGATAAGTTTAGCTGCTGTCGTTGGTTGTATGATGCCATTTATGTTGGGAGTATGCTTTCTTTGTCCTTCAATGGATTGCCTTTGGCATAAGTATCACTATTGTCCCAGCTGCAAGGAAAAGGTTGGTGATTTTGAGAAATCGGATGTGTGTGCTGTGATGGATCCTCCACACTGGACACAGCCAAGCTTTGCATTGCCTGCCTGA

Protein sequence

MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSGLTSIRFLFYLLSISASRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKSDVCAVMDPPHWTQPSFALPA

Homology

[Close]

BLAST of CmoCh17G013590 vs. ExPASy Swiss-Prot
Match: Q94CD4 (GSH-induced LITAF domain protein OS=Arabidopsis thaliana OX=3702 GN=GILP PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.3e-53
Identity = 93/146 (63.70%), Postives = 108/146 (73.97%), Query Frame = 0


Query: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60
           M+K    V+G+P+Y G N YQAG +PPNAI+G P G PI QT+YRDTPAP+ C+YCGN+G
Sbjct: 1   MAKEGTTVIGVPYYAGQNPYQAGIVPPNAIYGDPLGAPIQQTIYRDTPAPFNCLYCGNTG 60

Query: 61  LTSIRFLFYLLSISASRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120
           LT++            RSK  +AAVV CMMPFMLG CFLCPSMDCLW+K H+CP C  KV
Sbjct: 61  LTNL------------RSKPGVAAVVACMMPFMLGFCFLCPSMDCLWNKQHHCPQCGNKV 120

Query: 121 GDFEKSDVCAVMDPPHWTQPSFALPA 147
            DFEKSD C VMDPP W QPSFALPA
Sbjct: 121 ADFEKSDPCLVMDPPQWKQPSFALPA 134

[Close]

BLAST of CmoCh17G013590 vs. ExPASy TrEMBL
Match: A0A6J1GS01 (GSH-induced LITAF domain protein OS=Cucurbita moschata OX=3662 GN=LOC111456579 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75
Identity = 134/146 (91.78%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60
           MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG
Sbjct: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60

Query: 61  LTSIRFLFYLLSISASRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120
           LTSI            RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV
Sbjct: 61  LTSI------------RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120

Query: 121 GDFEKSDVCAVMDPPHWTQPSFALPA 147
           GDFEKSDVCAVMDPPHWTQPSFALPA
Sbjct: 121 GDFEKSDVCAVMDPPHWTQPSFALPA 134

[Close]

BLAST of CmoCh17G013590 vs. ExPASy TrEMBL
Match: A0A6J1JVN9 (GSH-induced LITAF domain protein OS=Cucurbita maxima OX=3661 GN=LOC111488277 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.6e-74
Identity = 132/146 (90.41%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60
           MSKNDEPVVGIPFYVGNN+YQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG
Sbjct: 1   MSKNDEPVVGIPFYVGNNSYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60

Query: 61  LTSIRFLFYLLSISASRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120
           LTSI            RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV
Sbjct: 61  LTSI------------RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120

Query: 121 GDFEKSDVCAVMDPPHWTQPSFALPA 147
           GDFEKSD CAVMDPPHWTQPSFALPA
Sbjct: 121 GDFEKSDACAVMDPPHWTQPSFALPA 134

[Close]

BLAST of CmoCh17G013590 vs. ExPASy TrEMBL
Match: A0A5D3DMB0 (Zf-LITAF-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002020 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66
Identity = 121/145 (83.45%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60
           MSKN EPVVG+P YVGNN YQAGQIPPNAIFG PQGVPI QTMYRDTPAP+ CVYCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTSIRFLFYLLSISASRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120
           LT+I            RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV
Sbjct: 61  LTTI------------RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120

Query: 121 GDFEKSDVCAVMDPPHWTQPSFALP 146
           GDFEK D CAVMDPPHWTQPS+ALP
Sbjct: 121 GDFEKLDRCAVMDPPHWTQPSYALP 133

[Close]

BLAST of CmoCh17G013590 vs. ExPASy TrEMBL
Match: A0A1S3CCH3 (uncharacterized protein LOC103498881 OS=Cucumis melo OX=3656 GN=LOC103498881 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.6e-66
Identity = 120/145 (82.76%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60
           MSKN EPVVG+P YVGNN YQAGQIPPN IFG PQGVPI QTMYRDTPAP+ CVYCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTSIRFLFYLLSISASRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120
           LT+I            RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV
Sbjct: 61  LTTI------------RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120

Query: 121 GDFEKSDVCAVMDPPHWTQPSFALP 146
           GDFEK D CAVMDPPHWTQPS+ALP
Sbjct: 121 GDFEKLDRCAVMDPPHWTQPSYALP 133

[Close]

BLAST of CmoCh17G013590 vs. ExPASy TrEMBL
Match: A0A0A0KDG7 (LITAF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091950 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.3e-65
Identity = 119/145 (82.07%), Postives = 123/145 (84.83%), Query Frame = 0


Query: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60
           MSKN EPVVG+P YVGNN YQAGQIPPNAIFG P GVPI QTMYRDTPAP+ CVYCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPHGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTSIRFLFYLLSISASRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120
           LT+I            RSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV
Sbjct: 61  LTTI------------RSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120

Query: 121 GDFEKSDVCAVMDPPHWTQPSFALP 146
           GDFEK D CAVMDPPHWTQPS+ALP
Sbjct: 121 GDFEKLDRCAVMDPPHWTQPSYALP 133

[Close]

BLAST of CmoCh17G013590 vs. NCBI nr
Match: XP_022954275.1 (GSH-induced LITAF domain protein [Cucurbita moschata] >XP_023547364.1 GSH-induced LITAF domain protein [Cucurbita pepo subsp. pepo] >KAG6576107.1 GSH-induced LITAF domain protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014627.1 GSH-induced LITAF domain protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291.2 bits (744), Expect = 5.0e-75
Identity = 134/146 (91.78%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60
           MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG
Sbjct: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60

Query: 61  LTSIRFLFYLLSISASRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120
           LTSI            RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV
Sbjct: 61  LTSI------------RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120

Query: 121 GDFEKSDVCAVMDPPHWTQPSFALPA 147
           GDFEKSDVCAVMDPPHWTQPSFALPA
Sbjct: 121 GDFEKSDVCAVMDPPHWTQPSFALPA 134

[Close]

BLAST of CmoCh17G013590 vs. NCBI nr
Match: XP_022991744.1 (GSH-induced LITAF domain protein [Cucurbita maxima])

HSP 1 Score: 288.5 bits (737), Expect = 3.2e-74
Identity = 132/146 (90.41%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60
           MSKNDEPVVGIPFYVGNN+YQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG
Sbjct: 1   MSKNDEPVVGIPFYVGNNSYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60

Query: 61  LTSIRFLFYLLSISASRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120
           LTSI            RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV
Sbjct: 61  LTSI------------RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120

Query: 121 GDFEKSDVCAVMDPPHWTQPSFALPA 147
           GDFEKSD CAVMDPPHWTQPSFALPA
Sbjct: 121 GDFEKSDACAVMDPPHWTQPSFALPA 134

[Close]

BLAST of CmoCh17G013590 vs. NCBI nr
Match: KAA0039847.1 (zf-LITAF-like domain-containing protein [Cucumis melo var. makuwa] >TYK24652.1 zf-LITAF-like domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 262.3 bits (669), Expect = 2.5e-66
Identity = 121/145 (83.45%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60
           MSKN EPVVG+P YVGNN YQAGQIPPNAIFG PQGVPI QTMYRDTPAP+ CVYCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTSIRFLFYLLSISASRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120
           LT+I            RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV
Sbjct: 61  LTTI------------RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120

Query: 121 GDFEKSDVCAVMDPPHWTQPSFALP 146
           GDFEK D CAVMDPPHWTQPS+ALP
Sbjct: 121 GDFEKLDRCAVMDPPHWTQPSYALP 133

[Close]

BLAST of CmoCh17G013590 vs. NCBI nr
Match: XP_008459901.1 (PREDICTED: uncharacterized protein LOC103498881 [Cucumis melo])

HSP 1 Score: 260.4 bits (664), Expect = 9.4e-66
Identity = 120/145 (82.76%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60
           MSKN EPVVG+P YVGNN YQAGQIPPN IFG PQGVPI QTMYRDTPAP+ CVYCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTSIRFLFYLLSISASRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120
           LT+I            RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV
Sbjct: 61  LTTI------------RSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120

Query: 121 GDFEKSDVCAVMDPPHWTQPSFALP 146
           GDFEK D CAVMDPPHWTQPS+ALP
Sbjct: 121 GDFEKLDRCAVMDPPHWTQPSYALP 133

[Close]

BLAST of CmoCh17G013590 vs. NCBI nr
Match: XP_004140553.1 (GSH-induced LITAF domain protein [Cucumis sativus] >KGN46422.1 hypothetical protein Csa_005550 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 4.7e-65
Identity = 119/145 (82.07%), Postives = 123/145 (84.83%), Query Frame = 0


Query: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60
           MSKN EPVVG+P YVGNN YQAGQIPPNAIFG P GVPI QTMYRDTPAP+ CVYCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPHGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTSIRFLFYLLSISASRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120
           LT+I            RSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV
Sbjct: 61  LTTI------------RSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120

Query: 121 GDFEKSDVCAVMDPPHWTQPSFALP 146
           GDFEK D CAVMDPPHWTQPS+ALP
Sbjct: 121 GDFEKLDRCAVMDPPHWTQPSYALP 133

[Close]

BLAST of CmoCh17G013590 vs. TAIR 10
Match: AT5G13190.1 (CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 209.1 bits (531), Expect = 2.3e-54
Identity = 93/146 (63.70%), Postives = 108/146 (73.97%), Query Frame = 0


Query: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60
           M+K    V+G+P+Y G N YQAG +PPNAI+G P G PI QT+YRDTPAP+ C+YCGN+G
Sbjct: 1   MAKEGTTVIGVPYYAGQNPYQAGIVPPNAIYGDPLGAPIQQTIYRDTPAPFNCLYCGNTG 60

Query: 61  LTSIRFLFYLLSISASRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKV 120
           LT++            RSK  +AAVV CMMPFMLG CFLCPSMDCLW+K H+CP C  KV
Sbjct: 61  LTNL------------RSKPGVAAVVACMMPFMLGFCFLCPSMDCLWNKQHHCPQCGNKV 120

Query: 121 GDFEKSDVCAVMDPPHWTQPSFALPA 147
            DFEKSD C VMDPP W QPSFALPA
Sbjct: 121 ADFEKSDPCLVMDPPQWKQPSFALPA 134

The following BLAST results are available for this feature:

BLAST of CmoCh17G013590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CD4	3.3e-53	63.70	GSH-induced LITAF domain protein OS=Arabidopsis thaliana OX=3702 GN=GILP PE=1 SV...	[more]

BLAST of CmoCh17G013590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GS01	2.4e-75	91.78	GSH-induced LITAF domain protein OS=Cucurbita moschata OX=3662 GN=LOC111456579 P...	[more]
A0A6J1JVN9	1.6e-74	90.41	GSH-induced LITAF domain protein OS=Cucurbita maxima OX=3661 GN=LOC111488277 PE=...	[more]
A0A5D3DMB0	1.2e-66	83.45	Zf-LITAF-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CCH3	4.6e-66	82.76	uncharacterized protein LOC103498881 OS=Cucumis melo OX=3656 GN=LOC103498881 PE=...	[more]
A0A0A0KDG7	2.3e-65	82.07	LITAF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091950 PE=3 ...	[more]

BLAST of CmoCh17G013590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954275.1	5.0e-75	91.78	GSH-induced LITAF domain protein [Cucurbita moschata] >XP_023547364.1 GSH-induce...	[more]
XP_022991744.1	3.2e-74	90.41	GSH-induced LITAF domain protein [Cucurbita maxima]	[more]
KAA0039847.1	2.5e-66	83.45	zf-LITAF-like domain-containing protein [Cucumis melo var. makuwa] >TYK24652.1 z...	[more]
XP_008459901.1	9.4e-66	82.76	PREDICTED: uncharacterized protein LOC103498881 [Cucumis melo]	[more]
XP_004140553.1	4.7e-65	82.07	GSH-induced LITAF domain protein [Cucumis sativus] >KGN46422.1 hypothetical prot...	[more]

BLAST of CmoCh17G013590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13190.1	2.3e-54	63.70	CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (Inte...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006629	LPS-induced tumour necrosis factor alpha factor	SMART	SM00714	litaf	coord: 48..125 e-value: 1.2E-7 score: 41.4
IPR006629	LPS-induced tumour necrosis factor alpha factor	PFAM	PF10601	zf-LITAF-like	coord: 46..122 e-value: 4.9E-7 score: 29.9
IPR006629	LPS-induced tumour necrosis factor alpha factor	PROSITE	PS51837	LITAF	coord: 33..125 score: 9.573557
IPR037519	LITAF domain containing protein	PANTHER	PTHR23292	LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR	coord: 3..138
None	No IPR available	PANTHER	PTHR23292:SF37	BNAC09G43880D PROTEIN	coord: 3..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G013590.1	CmoCh17G013590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding