CmoCh17G012990 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G012990
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ferredoxin-2, mitochondrial
Location	Cmo_Chr17: 10200377 .. 10200871 (-)
RNA-Seq Expression	CmoCh17G012990
Synteny	CmoCh17G012990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTCGTAAACCTACACAGGCTCCGCCAAATCCACCGTCTGCCGGCGATCAGCTGCTCCAAATCCATTTTCTCAAGATGGTCGGCGTCCGCTGCTGCCTCGACGGAATCCTCATCGTCCTCATCTAAAAAGGTATCAGATCGAATCGTCAAATTGTTCGCAATTGATCCGGAGGGCACGAAGAAAGAGGTCGTTGGATTAACGGGTCAGACTCTTCTTAAGGCGCTTGCGAATCGGGGCCTGATCGACCCCGATTCCCATCGATTGGAAAACATTGATGCCTGTTCGGCGGAATGCGAGGTTAGTATTGCTCAGGAGTGGCTCGAGAAGCTCCCGCCGCGGTCCTACGACGAGGAGTATGTGCTCAAGAGAAACTCCAGGGTCAGGGCTTTGAACAAGCACTCAAGGCTTGGCTGCCAGGTTATCCTCACCCCCGAACTTCAAGGTATGGTCGTTGCAGTTCCCGAGCCCAAGCCTTGGGACATTCCTTAA

mRNA sequence

ATGGCGGTCGTAAACCTACACAGGCTCCGCCAAATCCACCGTCTGCCGGCGATCAGCTGCTCCAAATCCATTTTCTCAAGATGGTCGGCGTCCGCTGCTGCCTCGACGGAATCCTCATCGTCCTCATCTAAAAAGGTATCAGATCGAATCGTCAAATTGTTCGCAATTGATCCGGAGGGCACGAAGAAAGAGGTCGTTGGATTAACGGGTCAGACTCTTCTTAAGGCGCTTGCGAATCGGGGCCTGATCGACCCCGATTCCCATCGATTGGAAAACATTGATGCCTGTTCGGCGGAATGCGAGGTTAGTATTGCTCAGGAGTGGCTCGAGAAGCTCCCGCCGCGGTCCTACGACGAGGAGTATGTGCTCAAGAGAAACTCCAGGGTCAGGGCTTTGAACAAGCACTCAAGGCTTGGCTGCCAGGTTATCCTCACCCCCGAACTTCAAGGTATGGTCGTTGCAGTTCCCGAGCCCAAGCCTTGGGACATTCCTTAA

Coding sequence (CDS)

ATGGCGGTCGTAAACCTACACAGGCTCCGCCAAATCCACCGTCTGCCGGCGATCAGCTGCTCCAAATCCATTTTCTCAAGATGGTCGGCGTCCGCTGCTGCCTCGACGGAATCCTCATCGTCCTCATCTAAAAAGGTATCAGATCGAATCGTCAAATTGTTCGCAATTGATCCGGAGGGCACGAAGAAAGAGGTCGTTGGATTAACGGGTCAGACTCTTCTTAAGGCGCTTGCGAATCGGGGCCTGATCGACCCCGATTCCCATCGATTGGAAAACATTGATGCCTGTTCGGCGGAATGCGAGGTTAGTATTGCTCAGGAGTGGCTCGAGAAGCTCCCGCCGCGGTCCTACGACGAGGAGTATGTGCTCAAGAGAAACTCCAGGGTCAGGGCTTTGAACAAGCACTCAAGGCTTGGCTGCCAGGTTATCCTCACCCCCGAACTTCAAGGTATGGTCGTTGCAGTTCCCGAGCCCAAGCCTTGGGACATTCCTTAA

Protein sequence

MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEGTKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP

Homology

[Close]

BLAST of CmoCh17G012990 vs. ExPASy Swiss-Prot
Match: Q6P4F2 (Ferredoxin-2, mitochondrial OS=Homo sapiens OX=9606 GN=FDX2 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-07
Identity = 37/108 (34.26%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 50  IVKLFAIDPEGTKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWL 109
           +V +  +D  G +  V G  G  +L  LA R  +D +    E   ACS  C V ++++ L
Sbjct: 70  VVNVVFVDRSGQRIPVSGRVGDNVLH-LAQRHGVDLEG-ACEASLACST-CHVYVSEDHL 129

Query: 110 EKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPE 158
           + LPP    E+ +L        L ++SRLGCQ++LTPEL+G    +P+
Sbjct: 130 DLLPPPEEREDDML---DMAPLLQENSRLGCQIVLTPELEGAEFTLPK 171

[Close]

BLAST of CmoCh17G012990 vs. ExPASy Swiss-Prot
Match: Q9CPW2 (Ferredoxin-2, mitochondrial OS=Mus musculus OX=10090 GN=Fdx2 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.8e-07
Identity = 39/118 (33.05%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 40  SSSSKKVSDRIVKLFAIDPEGTKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAE 99
           ++ S ++   +V +  +D  G +  V G  G  +L  LA R  +D +    E   ACS  
Sbjct: 48  AADSPELPRDVVNVVFVDRSGKRIPVRGKVGDNVL-YLAQRHGVDLEG-ACEASLACST- 107

Query: 100 CEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPE 158
           C V +++  L+ LPP    E+ +L        L ++SRLGCQ++LTPEL+G+  A+P+
Sbjct: 108 CHVYVSEAHLDLLPPPEEREDDML---DMAPLLQENSRLGCQIVLTPELEGVEFALPK 159

[Close]

BLAST of CmoCh17G012990 vs. ExPASy Swiss-Prot
Match: P37193 (Adrenodoxin-like protein 1, mitochondrial OS=Drosophila melanogaster OX=7227 GN=Fdx1 PE=2 SV=3)

HSP 1 Score: 53.5 bits (127), Expect = 2.6e-06
Identity = 36/118 (30.51%), Postives = 60/118 (50.85%), Query Frame = 0


Query: 45  KVSDRIVKLFAIDPEGTKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAE----- 104
           K +D IV +  +D +G + +V G  G  +L  LA+R       H +E   AC A      
Sbjct: 51  KSTDEIVNITYVDKDGKRTKVQGKVGDNVL-YLAHR-------HGIEMEGACEASLACTT 110

Query: 105 CEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPE 158
           C V +  ++L+KL      E+ +L        L ++SRLGCQ++L   ++GM + +P+
Sbjct: 111 CHVYVQHDYLQKLKEAEEQEDDLL---DMAPFLRENSRLGCQILLDKSMEGMELELPK 157

[Close]

BLAST of CmoCh17G012990 vs. ExPASy Swiss-Prot
Match: P43493 (Rhodocoxin OS=Rhodococcus erythropolis OX=1833 GN=thcC PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 2.6e-06
Identity = 32/103 (31.07%), Postives = 55/103 (53.40%), Query Frame = 0


Query: 56  IDPEGTKKEVVGLTGQTLLKALANRGLIDPDSHRLE-NIDACSAECEVSIAQEWLEKLPP 115
           + P+GTK EV   TG+ +++A    G+   D    E    A  A C V +   W +K P 
Sbjct: 7   VHPDGTKHEVEVPTGKRVMQAAIGAGI---DGIVAECGGQAMCATCHVYVESPWADKFPS 66

Query: 116 RSYDEEYVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPE 158
            S +E+ +L  +  V    + SRL CQ++++ ++ G++V +PE
Sbjct: 67  ISEEEDEML--DDTVSPRTEASRLSCQLVVSDDVDGLIVRLPE 104

[Close]

BLAST of CmoCh17G012990 vs. ExPASy Swiss-Prot
Match: Q5FWQ0 (Ferredoxin-2, mitochondrial OS=Xenopus laevis OX=8355 GN=fdx2 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.5e-06
Identity = 42/130 (32.31%), Postives = 69/130 (53.08%), Query Frame = 0


Query: 29  SASAAASTESSSSSSK-KVSDRIVKLFAIDPEGTKKEVVGLTGQTLLKALANRGLIDPDS 88
           SA   A  ES + + + ++S+  V++  +D  G +  V G  G+++L  LA+R  I+ + 
Sbjct: 55  SAQITAGVESDAENQRAELSEETVEVVFLDRSGQRIPVKGKVGESVL-CLAHRYNIELEG 114

Query: 89  HRLENIDACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPE 148
              E+  ACS  C V +  E+  KLP     E+ +L        L ++SRLGCQ+ILT +
Sbjct: 115 -ACESSLACST-CHVYVNTEYFHKLPEPDEREDDML---DMAPLLQENSRLGCQIILTKQ 174

Query: 149 LQGMVVAVPE 158
           L G    +P+
Sbjct: 175 LNGAEFTLPK 178

[Close]

BLAST of CmoCh17G012990 vs. ExPASy TrEMBL
Match: A0A6J1GP07 (uncharacterized protein LOC111456197 OS=Cucurbita moschata OX=3662 GN=LOC111456197 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.2e-84
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG 60
           MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG
Sbjct: 1   MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG 60

Query: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE
Sbjct: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 165
           YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP
Sbjct: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 164

[Close]

BLAST of CmoCh17G012990 vs. ExPASy TrEMBL
Match: A0A6J1JU11 (uncharacterized protein LOC111488356 OS=Cucurbita maxima OX=3661 GN=LOC111488356 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79
Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG 60
           MAV NLHRLRQI RLPAIS SKSIFSRWSASAAAST+SSSSSSKKVSDRIVKLFAIDPEG
Sbjct: 1   MAVANLHRLRQIDRLPAISYSKSIFSRWSASAAASTDSSSSSSKKVSDRIVKLFAIDPEG 60

Query: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE
Sbjct: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 165
           YVLKR+SRVRALNKHSRLGCQVILTPELQGMVVAVPE KPWDIP
Sbjct: 121 YVLKRSSRVRALNKHSRLGCQVILTPELQGMVVAVPETKPWDIP 164

[Close]

BLAST of CmoCh17G012990 vs. ExPASy TrEMBL
Match: A0A6J1L0K3 (uncharacterized protein LOC111497990 OS=Cucurbita maxima OX=3661 GN=LOC111497990 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.5e-76
Identity = 150/164 (91.46%), Postives = 158/164 (96.34%), Query Frame = 0


Query: 1   MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG 60
           MAV NLHRLRQIHRLPAIS SKSIF+R SASA AS+E+ SSSSKKVSDRIVKLFAIDPEG
Sbjct: 1   MAVANLHRLRQIHRLPAISYSKSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEG 60

Query: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKE+VGLTGQTLLKALANRGLIDP+SHRLE+I ACSAECEVSIAQEWLEKLPPRSYDEE
Sbjct: 61  TKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 165
           YVLKRNSRVRALNKHSRLGCQVILTP+LQGMVVAVPEPKPW+IP
Sbjct: 121 YVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 164

[Close]

BLAST of CmoCh17G012990 vs. ExPASy TrEMBL
Match: A0A6J1CR41 (uncharacterized protein LOC111013414 OS=Momordica charantia OX=3673 GN=LOC111013414 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.6e-75
Identity = 146/164 (89.02%), Postives = 156/164 (95.12%), Query Frame = 0


Query: 1   MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG 60
           MAV NLHRLRQ +RLPAIS SKSIFSRWSASA A++  SSSSS+KVSDRIVKLFAIDPEG
Sbjct: 1   MAVANLHRLRQFNRLPAISYSKSIFSRWSASAVAASPESSSSSRKVSDRIVKLFAIDPEG 60

Query: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120
           T++EVVGLTGQTLLKALANRGLIDPDSHRLE IDACSAECEVSIA+EWLEKLPPRSYDEE
Sbjct: 61  TRREVVGLTGQTLLKALANRGLIDPDSHRLEEIDACSAECEVSIAEEWLEKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 165
           YVLKR+SRVR LNKHSRLGCQV+LTP+LQGMVVAVPEPKPWDIP
Sbjct: 121 YVLKRSSRVRVLNKHSRLGCQVVLTPDLQGMVVAVPEPKPWDIP 164

[Close]

BLAST of CmoCh17G012990 vs. ExPASy TrEMBL
Match: A0A6J1H9A5 (uncharacterized protein LOC111461255 OS=Cucurbita moschata OX=3662 GN=LOC111461255 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.3e-73
Identity = 147/164 (89.63%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG 60
           MAV NLHR RQIHRLPAI  S SIF+R SASA AS+E+ SSSSKKVSDRIVKLFAIDPEG
Sbjct: 1   MAVANLHRFRQIHRLPAI--SYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEG 60

Query: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKE+VGLTGQTLLKALANRGLIDP+SHRLE+I ACSAECEVSIAQEWLEKLPPRSYDEE
Sbjct: 61  TKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 165
           YVLKRNSRVRALNKHSRLGCQVILTP+LQGMVVAVPEPKPW+IP
Sbjct: 121 YVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 162

[Close]

BLAST of CmoCh17G012990 vs. NCBI nr
Match: XP_022953771.1 (uncharacterized protein LOC111456197 [Cucurbita moschata])

HSP 1 Score: 320.5 bits (820), Expect = 8.6e-84
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG 60
           MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG
Sbjct: 1   MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG 60

Query: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE
Sbjct: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 165
           YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP
Sbjct: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 164

[Close]

BLAST of CmoCh17G012990 vs. NCBI nr
Match: KAG6576046.1 (Ferredoxin-2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014569.1 Ferredoxin-2, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.9 bits (816), Expect = 2.5e-83
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG 60
           MAV NLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG
Sbjct: 1   MAVANLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG 60

Query: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE
Sbjct: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 165
           YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP
Sbjct: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 164

[Close]

BLAST of CmoCh17G012990 vs. NCBI nr
Match: XP_023548565.1 (uncharacterized protein LOC111807194 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.1 bits (780), Expect = 3.7e-79
Identity = 159/164 (96.95%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG 60
           MAV NLHRLRQIHRLPAIS SKSIFSRWSASAAASTE   SSSKKVSDRIVKLFAIDPEG
Sbjct: 1   MAVGNLHRLRQIHRLPAISYSKSIFSRWSASAAASTE---SSSKKVSDRIVKLFAIDPEG 60

Query: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE
Sbjct: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 165
           YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP
Sbjct: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 161

[Close]

BLAST of CmoCh17G012990 vs. NCBI nr
Match: XP_022991825.1 (uncharacterized protein LOC111488356 [Cucurbita maxima])

HSP 1 Score: 305.1 bits (780), Expect = 3.7e-79
Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG 60
           MAV NLHRLRQI RLPAIS SKSIFSRWSASAAAST+SSSSSSKKVSDRIVKLFAIDPEG
Sbjct: 1   MAVANLHRLRQIDRLPAISYSKSIFSRWSASAAASTDSSSSSSKKVSDRIVKLFAIDPEG 60

Query: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE
Sbjct: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 165
           YVLKR+SRVRALNKHSRLGCQVILTPELQGMVVAVPE KPWDIP
Sbjct: 121 YVLKRSSRVRALNKHSRLGCQVILTPELQGMVVAVPETKPWDIP 164

[Close]

BLAST of CmoCh17G012990 vs. NCBI nr
Match: XP_023004798.1 (uncharacterized protein LOC111497990 [Cucurbita maxima] >XP_023513596.1 uncharacterized protein LOC111778155 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 150/164 (91.46%), Postives = 158/164 (96.34%), Query Frame = 0


Query: 1   MAVVNLHRLRQIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEG 60
           MAV NLHRLRQIHRLPAIS SKSIF+R SASA AS+E+ SSSSKKVSDRIVKLFAIDPEG
Sbjct: 1   MAVANLHRLRQIHRLPAISYSKSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEG 60

Query: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKE+VGLTGQTLLKALANRGLIDP+SHRLE+I ACSAECEVSIAQEWLEKLPPRSYDEE
Sbjct: 61  TKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 165
           YVLKRNSRVRALNKHSRLGCQVILTP+LQGMVVAVPEPKPW+IP
Sbjct: 121 YVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 164

[Close]

BLAST of CmoCh17G012990 vs. TAIR 10
Match: AT3G07480.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.5e-54
Identity = 109/154 (70.78%), Postives = 129/154 (83.77%), Query Frame = 0


Query: 11  QIHRLPAISCSKSIFSRWSASAAASTESSSSSSKKVSDRIVKLFAIDPEGTKKEVVGLTG 70
           QIHRL     ++S+  R SA++A    S S  SKKVSDRIVKL AIDP+G K++++GL+G
Sbjct: 11  QIHRLSPF--TRSLIVRTSATSA---PSPSLGSKKVSDRIVKLSAIDPDGYKQDIIGLSG 70

Query: 71  QTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVR 130
           QTLL+AL + GLIDP SHRL++I+ACSAECEV IA+EWLEKLPPR+YDEEYVLKR+SR R
Sbjct: 71  QTLLRALTHTGLIDPASHRLDDIEACSAECEVQIAEEWLEKLPPRTYDEEYVLKRSSRSR 130

Query: 131 ALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 165
            LNKHSRLGCQV+LT ELQGMVVAVPE KPWDIP
Sbjct: 131 ILNKHSRLGCQVVLTQELQGMVVAVPEAKPWDIP 159

The following BLAST results are available for this feature:

BLAST of CmoCh17G012990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6P4F2	5.2e-07	34.26	Ferredoxin-2, mitochondrial OS=Homo sapiens OX=9606 GN=FDX2 PE=1 SV=2	[more]
Q9CPW2	8.8e-07	33.05	Ferredoxin-2, mitochondrial OS=Mus musculus OX=10090 GN=Fdx2 PE=1 SV=1	[more]
P37193	2.6e-06	30.51	Adrenodoxin-like protein 1, mitochondrial OS=Drosophila melanogaster OX=7227 GN=...	[more]
P43493	2.6e-06	31.07	Rhodocoxin OS=Rhodococcus erythropolis OX=1833 GN=thcC PE=1 SV=2	[more]
Q5FWQ0	7.5e-06	32.31	Ferredoxin-2, mitochondrial OS=Xenopus laevis OX=8355 GN=fdx2 PE=2 SV=1	[more]

BLAST of CmoCh17G012990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GP07	4.2e-84	100.00	uncharacterized protein LOC111456197 OS=Cucurbita moschata OX=3662 GN=LOC1114561...	[more]
A0A6J1JU11	1.8e-79	96.34	uncharacterized protein LOC111488356 OS=Cucurbita maxima OX=3661 GN=LOC111488356...	[more]
A0A6J1L0K3	5.5e-76	91.46	uncharacterized protein LOC111497990 OS=Cucurbita maxima OX=3661 GN=LOC111497990...	[more]
A0A6J1CR41	4.6e-75	89.02	uncharacterized protein LOC111013414 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1H9A5	4.3e-73	89.63	uncharacterized protein LOC111461255 OS=Cucurbita moschata OX=3662 GN=LOC1114612...	[more]

BLAST of CmoCh17G012990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953771.1	8.6e-84	100.00	uncharacterized protein LOC111456197 [Cucurbita moschata]	[more]
KAG6576046.1	2.5e-83	99.39	Ferredoxin-2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KA...	[more]
XP_023548565.1	3.7e-79	96.95	uncharacterized protein LOC111807194 [Cucurbita pepo subsp. pepo]	[more]
XP_022991825.1	3.7e-79	96.34	uncharacterized protein LOC111488356 [Cucurbita maxima]	[more]
XP_023004798.1	1.1e-75	91.46	uncharacterized protein LOC111497990 [Cucurbita maxima] >XP_023513596.1 uncharac...	[more]

BLAST of CmoCh17G012990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07480.1	1.5e-54	70.78	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 46..159 e-value: 1.3E-22 score: 81.5
None	No IPR available	PANTHER	PTHR23426:SF35	2FE-2S FERREDOXIN-LIKE SUPERFAMILY PROTEIN	coord: 1..163
None	No IPR available	PANTHER	PTHR23426	FERREDOXIN/ADRENODOXIN	coord: 1..163
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 51..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G012990.1	CmoCh17G012990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0051536	iron-sulfur cluster binding