Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAAATTGTTTATGGCTTTGCTTTTGGCACTTATGGCCACTCACGCCGTAGCTAGACCTGCGCCAACCCACGCCACTTTCAATGACCAAAAGAATCTCCTTGGTGGGGTTGGTGGCGTCTCCGGCCTCCCCTTCGGTGGATTGGGTGGTGGTCTTGGTTTTCCTGGTGGAATTGGTGGTCTCGGTGGCCCTGGTGGTATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGTGGTCTTGGCTTTCCTGGTGGGATTGGCGGGCTCGGTGGCCCTGGTGGGATTGGTGGTCTCGGTGGCCCTGGTGGAGTTGGGGGACTGGGAGGCACTGGTGGTGGCTTGGGTGGAGGTGGAAGCGGAGGTACCGGTGGTGTTGGTGTTGGTGGCGGTTCTGGTGGCCCTTATCCTTGA
mRNA sequence
ATGGGCAAATTGTTTATGGCTTTGCTTTTGGCACTTATGGCCACTCACGCCGTAGCTAGACCTGCGCCAACCCACGCCACTTTCAATGACCAAAAGAATCTCCTTGGTGGGGTTGGTGGCGTCTCCGGCCTCCCCTTCGGTGGATTGGGTGGTGGTCTTGGTTTTCCTGGTGGAATTGGTGGTCTCGGTGGCCCTGGTGGTATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGTGGTCTTGGCTTTCCTGGTGGGATTGGCGGGCTCGGTGGCCCTGGTGGGATTGGTGGTCTCGGTGGCCCTGGTGGAGTTGGGGGACTGGGAGGCACTGGTGGTGGCTTGGGTGGAGGTGGAAGCGGAGGTACCGGTGGTGTTGGTGTTGGTGGCGGTTCTGGTGGCCCTTATCCTTGA
Coding sequence (CDS)
ATGGGCAAATTGTTTATGGCTTTGCTTTTGGCACTTATGGCCACTCACGCCGTAGCTAGACCTGCGCCAACCCACGCCACTTTCAATGACCAAAAGAATCTCCTTGGTGGGGTTGGTGGCGTCTCCGGCCTCCCCTTCGGTGGATTGGGTGGTGGTCTTGGTTTTCCTGGTGGAATTGGTGGTCTCGGTGGCCCTGGTGGTATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGTGGTCTTGGCTTTCCTGGTGGGATTGGCGGGCTCGGTGGCCCTGGTGGGATTGGTGGTCTCGGTGGCCCTGGTGGAGTTGGGGGACTGGGAGGCACTGGTGGTGGCTTGGGTGGAGGTGGAAGCGGAGGTACCGGTGGTGTTGGTGTTGGTGGCGGTTCTGGTGGCCCTTATCCTTGA
Protein sequence
MGKLFMALLLALMATHAVARPAPTHATFNDQKNLLGGVGGVSGLPFGGLGGGLGFPGGIGGLGGPGGIGGLGFPGGIGGLGFPGGIGGLGFPGGIGGLGGPGGIGGLGGPGGVGGLGGTGGGLGGGGSGGTGGVGVGGGSGGPYP
Homology
BLAST of CmoCh17G012130 vs. ExPASy TrEMBL
Match:
A0A6J1GP70 (glycine-rich protein 23-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455872 PE=4 SV=1)
HSP 1 Score: 191.4 bits (485), Expect = 2.6e-45
Identity = 130/145 (89.66%), Postives = 130/145 (89.66%), Query Frame = 0
Query: 1 MGKLFMALLLALMATHAVARPAPTHATFNDQKNLLGGVGGVSGLPFGGLGGGLGFPGGIG 60
MGKLFMALLLALMATHAVARPAPTHATFNDQKNLLGGVGGVSGLPFGGLGGGLGFPGGIG
Sbjct: 1 MGKLFMALLLALMATHAVARPAPTHATFNDQKNLLGGVGGVSGLPFGGLGGGLGFPGGIG 60
Query: 61 GLGGPGGIGGLGFPGGIGGLGFPGGIGGLGFPGGIGGLGGPGGIGGLGGPGGVGGLGGTG 120
GLGGPGGIGGLGFPGGIGGL GGLGGPGGIGGLGGPGGVGGLGGTG
Sbjct: 61 GLGGPGGIGGLGFPGGIGGL---------------GGLGGPGGIGGLGGPGGVGGLGGTG 120
Query: 121 GGLGGGGSGGTGGVGVGGGSGGPYP 146
GGLGGGGSGGTGGVGVGGGSGGPYP
Sbjct: 121 GGLGGGGSGGTGGVGVGGGSGGPYP 130
BLAST of CmoCh17G012130 vs. ExPASy TrEMBL
Match:
A0A6J1H8T3 (acanthoscurrin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461135 PE=4 SV=1)
HSP 1 Score: 73.9 bits (180), Expect = 6.0e-10
Identity = 94/153 (61.44%), Postives = 100/153 (65.36%), Query Frame = 0
Query: 1 MGKLFMALLLALMATHAVARPAPTHATFNDQKNLL--GGVGGVS-----GLPFGGLGGGL 60
M KLFMA+LLAL+ATHA+ARP P ATF DQKN L GG+GG S GLPFGGLGG +
Sbjct: 1 MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
Query: 61 G--FPGGIGGLGGPGGIGGLGFPGGIGGLGFPGGIGGLGFPGGIGGLGGPGGIGGLGGPG 120
G PGGIG GGIGGLG GG GG G GG+GG GGLGG G G LG
Sbjct: 61 GGTGPGGIG-----GGIGGLGGFGGGGGAGLGGGLGG-------GGLGGTMGGGNLG--- 120
Query: 121 GVGGLGGT-GGGLGGGGSGGTGGVGVGGGSGGP 144
GGLGGT GGGLGGG GG GG GGGSG P
Sbjct: 121 --GGLGGTVGGGLGGGLGGGVGG---GGGSGLP 133
BLAST of CmoCh17G012130 vs. ExPASy TrEMBL
Match:
A0A6P5RWK0 (glycine-rich protein 5-like OS=Prunus avium OX=42229 GN=LOC110750110 PE=4 SV=1)
HSP 1 Score: 72.0 bits (175), Expect = 2.3e-09
Identity = 99/174 (56.90%), Postives = 109/174 (62.64%), Query Frame = 0
Query: 1 MGKLFMALLLALMATHAVARPAPT--HATFNDQKNLLGGVGGVS-----GLPFGG----- 60
M + + L+LAL+ H AR PT A F DQKN LGGVGG S GLPF G
Sbjct: 1 MARWCIVLVLALVVAHTTARNVPTANDAGFKDQKNFLGGVGGFSGIGSNGLPFAGAGAGG 60
Query: 61 ---LGGGLGFPGGIGGL----GGPGGIGGLGFPGGIGGL----GFPGGIGGLGFPGGIGG 120
LGGGLG GIGG+ GG GGIG LG GG+GGL G GG+GGLG GG+GG
Sbjct: 61 GGDLGGGLGGGAGIGGVAGLGGGSGGIGDLGGAGGLGGLGGLGGGTGGLGGLGGLGGLGG 120
Query: 121 L----GGPGGIGGLGGPGGVGG-LGGTGGGLGGGGSGGTGGVGVGGGSGG-PYP 146
L GG GG+GGLGG GG GG LGG GGG+GGG GG GG GVGGGSG PYP
Sbjct: 121 LGGLGGGTGGLGGLGGVGGAGGVLGGAGGGVGGGVGGGVGG-GVGGGSGVLPYP 173
BLAST of CmoCh17G012130 vs. ExPASy TrEMBL
Match:
A0N070 (Glycine-rich protein OS=Gossypium hirsutum OX=3635 GN=GRP3 PE=2 SV=1)
HSP 1 Score: 70.1 bits (170), Expect = 8.7e-09
Identity = 88/159 (55.35%), Postives = 101/159 (63.52%), Query Frame = 0
Query: 6 MALLLALMATHAVARPAPT--------------HATFNDQKNLL--GGVGGV-----SGL 65
+ +LLAL+ HA AR PT A+ DQKN L GG GG +G+
Sbjct: 8 LLVLLALVVVHASARNVPTKTTTMAANAVPSAASASVGDQKNFLTYGGAGGFAGIGSNGM 67
Query: 66 PFGGLG--GGLGFPGGIGGLGGPGGIGGLGFPGGIGGLGFPGGIGGLGFPGGIGGLGGPG 125
PFGG G GG+ GG+GGLGG GG+GGLG GG GGLG GG+GGLG PGG+GG GG G
Sbjct: 68 PFGGGGVLGGVTPFGGVGGLGG-GGLGGLGGTGGFGGLGGTGGVGGLGGPGGVGGFGGTG 127
Query: 126 GIGGLGGPGGVGGLGGTGGGLGGGGSGGTGGVGVGGGSG 142
G GLGG GGVGG GG GGG+GGG G GG GVGGG+G
Sbjct: 128 GADGLGGTGGVGGFGGAGGGVGGGVGGAVGG-GVGGGAG 164
BLAST of CmoCh17G012130 vs. ExPASy TrEMBL
Match:
A0A5D2JY80 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D08G241800v1 PE=4 SV=1)
HSP 1 Score: 70.1 bits (170), Expect = 8.7e-09
Identity = 88/159 (55.35%), Postives = 101/159 (63.52%), Query Frame = 0
Query: 6 MALLLALMATHAVARPAPT--------------HATFNDQKNLL--GGVGGV-----SGL 65
+ +LLAL+ HA AR PT A+ DQKN L GG GG +G+
Sbjct: 8 LLVLLALVVVHASARNVPTKTTTMAANAVPSAASASVGDQKNFLTYGGAGGFAGIGSNGM 67
Query: 66 PFGGLG--GGLGFPGGIGGLGGPGGIGGLGFPGGIGGLGFPGGIGGLGFPGGIGGLGGPG 125
PFGG G GG+ GG+GGLGG GG+GGLG GG GGLG GG+GGLG PGG+GG GG G
Sbjct: 68 PFGGGGVLGGVTPFGGVGGLGG-GGLGGLGGTGGFGGLGGTGGVGGLGGPGGVGGFGGTG 127
Query: 126 GIGGLGGPGGVGGLGGTGGGLGGGGSGGTGGVGVGGGSG 142
G GLGG GGVGG GG GGG+GGG G GG GVGGG+G
Sbjct: 128 GADGLGGTGGVGGFGGAGGGVGGGVGGAVGG-GVGGGAG 164
BLAST of CmoCh17G012130 vs. NCBI nr
Match:
KAG6575962.1 (hypothetical protein SDJN03_26601, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 196.4 bits (498), Expect = 1.7e-46
Identity = 134/145 (92.41%), Postives = 137/145 (94.48%), Query Frame = 0
Query: 1 MGKLFMALLLALMATHAVARPAPTHATFNDQKNLLGGVGGVSGLPFGGLGGGLGFPGGIG 60
MGKLFMALLLAL+ATHAVARPAPTHATFNDQKNLLGGVG +SGLPFGGLGGGLGFPGGIG
Sbjct: 1 MGKLFMALLLALVATHAVARPAPTHATFNDQKNLLGGVGAISGLPFGGLGGGLGFPGGIG 60
Query: 61 GLGGPGGIGGLGFPGGIGGLGFPGGIGGLGFPGGIGGLGGPGGIGGLGGPGGVGGLGGTG 120
GLGGPGGIGGLGFPGGIGGLGFPGGIGGLG PGGIGGLGGPGG GG+ GGVGGLGGTG
Sbjct: 61 GLGGPGGIGGLGFPGGIGGLGFPGGIGGLGGPGGIGGLGGPGGNGGV---GGVGGLGGTG 120
Query: 121 GGLGGGGSGGTGGVGVGGGSGGPYP 146
GGLGGGGSGGTG GVGGGSGGPYP
Sbjct: 121 GGLGGGGSGGTG--GVGGGSGGPYP 140
BLAST of CmoCh17G012130 vs. NCBI nr
Match:
XP_022953275.1 (glycine-rich protein 23-like isoform X1 [Cucurbita moschata] >XP_022953276.1 glycine-rich protein 23-like isoform X2 [Cucurbita moschata])
HSP 1 Score: 191.4 bits (485), Expect = 5.3e-45
Identity = 130/145 (89.66%), Postives = 130/145 (89.66%), Query Frame = 0
Query: 1 MGKLFMALLLALMATHAVARPAPTHATFNDQKNLLGGVGGVSGLPFGGLGGGLGFPGGIG 60
MGKLFMALLLALMATHAVARPAPTHATFNDQKNLLGGVGGVSGLPFGGLGGGLGFPGGIG
Sbjct: 1 MGKLFMALLLALMATHAVARPAPTHATFNDQKNLLGGVGGVSGLPFGGLGGGLGFPGGIG 60
Query: 61 GLGGPGGIGGLGFPGGIGGLGFPGGIGGLGFPGGIGGLGGPGGIGGLGGPGGVGGLGGTG 120
GLGGPGGIGGLGFPGGIGGL GGLGGPGGIGGLGGPGGVGGLGGTG
Sbjct: 61 GLGGPGGIGGLGFPGGIGGL---------------GGLGGPGGIGGLGGPGGVGGLGGTG 120
Query: 121 GGLGGGGSGGTGGVGVGGGSGGPYP 146
GGLGGGGSGGTGGVGVGGGSGGPYP
Sbjct: 121 GGLGGGGSGGTGGVGVGGGSGGPYP 130
BLAST of CmoCh17G012130 vs. NCBI nr
Match:
XP_023549420.1 (glycine-rich protein 23-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 184.5 bits (467), Expect = 6.5e-43
Identity = 128/140 (91.43%), Postives = 132/140 (94.29%), Query Frame = 0
Query: 6 MALLLALMATHAVARPAPTHATFNDQKNLLGGVGGVSGLPFGGLGGGLGFPGGIGGLGGP 65
MALLLAL+ATHAVARPAPTHATFNDQKNLLGGVGG+SGLPFGGLGGGLGFPGGIGGLGGP
Sbjct: 1 MALLLALVATHAVARPAPTHATFNDQKNLLGGVGGISGLPFGGLGGGLGFPGGIGGLGGP 60
Query: 66 GGIGGLGFPGGIGGLGFPGGIGGLGFPGGIGGLGGPGGIGGLGGPGGVGGLGGTGGGLGG 125
GGIGGLGFPGGIGGLGFPGGIGGLG GG GG+GG GG GG+GG GGVGGLGGTGGGLGG
Sbjct: 61 GGIGGLGFPGGIGGLGFPGGIGGLGGLGGPGGIGGLGGPGGIGGVGGVGGLGGTGGGLGG 120
Query: 126 GGSGGTGGVGVGGGSGGPYP 146
GGSGGTG GVGGGSGGPYP
Sbjct: 121 GGSGGTG--GVGGGSGGPYP 138
BLAST of CmoCh17G012130 vs. NCBI nr
Match:
KAG7014487.1 (hypothetical protein SDJN02_24665, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 99.4 bits (246), Expect = 2.8e-17
Identity = 112/206 (54.37%), Postives = 118/206 (57.28%), Query Frame = 0
Query: 1 MGKLFMALLLALMATHAVARPAPTHATFNDQKNLL--GGVG-----GVSGLPFGGLGGGL 60
M KL MAL LALM THA+ARP P ATFNDQKN L GG+G G +GLPFGG+GG +
Sbjct: 1 MAKLLMALFLALMVTHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAV 60
Query: 61 GFPGGI-GGLGGP-GGIGGLGFPGGIGG-------------------------------- 120
G G + GGLGGP GGIGGLG GG GG
Sbjct: 61 GSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGGGSEKKKMGKLFMALLLALVA 120
Query: 121 --------------------LGFPGGIGGLGFPGGIGGLGGPGGIGGLGGPGGVGGLGGT 146
LG G I GL F G GGLG PGGIGGLGGPGGVGGLGGT
Sbjct: 121 THAVARPAPTHATFNDQKNLLGGVGAISGLPFGGLGGGLGFPGGIGGLGGPGGVGGLGGT 180
BLAST of CmoCh17G012130 vs. NCBI nr
Match:
XP_011659762.1 (glycine-rich protein 5 [Cucumis sativus])
HSP 1 Score: 75.5 bits (184), Expect = 4.3e-10
Identity = 94/153 (61.44%), Postives = 100/153 (65.36%), Query Frame = 0
Query: 1 MGKLFMALLLALMATHAVARPAPTHATFNDQKNLL--GGVGGVS-----GLPFGGLGGGL 60
M KLFMALLLAL+ATHA+ARP P TF+DQKN L GGVGG S GLPFGGLGG +
Sbjct: 1 MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGGAI 60
Query: 61 GFPGGIGGLGGPGGIGGLGFPGGIGGLGFPGGIGGLGFPGGIGGLGGPGGIGGLGGPGGV 120
G G GGLG GGLG GGLG GG G GG+GGLGGPG GG GG+
Sbjct: 61 GGGGLGGGLG-----GGLG-----GGLG-----GGTGIGGGLGGLGGPG-----GGFGGI 120
Query: 121 GG-LGGTGGGLGGGGSGGTGGVGVGGGSGGPYP 146
GG GG GGGLGGG GG GG GVGG SG YP
Sbjct: 121 GGTTGGLGGGLGGGLGGGLGG-GVGGASGVTYP 132
BLAST of CmoCh17G012130 vs. TAIR 10
Match:
AT1G04660.1 (glycine-rich protein )
HSP 1 Score: 43.5 bits (101), Expect = 1.7e-04
Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 0
Query: 34 LLGGVGGVSGLPFGGLGGGLGFP-----GGIGGLGG-PGGIGGL-GFPGGIGGLGFPGGI 93
L+GG+GG+ +GG+GG G GG+GGLGG GG+GGL G GG+GGLG GG+
Sbjct: 88 LIGGLGGIG--KYGGIGGAAGIGGFHSIGGVGGLGGVGGGVGGLGGVGGGVGGLGGVGGL 147
Query: 94 GGLGFPGGIGGLGGPGGIGGLGGPGGVGGLGGTGGGLGG-GGSGGTGGVGVGGGSGG 143
GG G GG+GG+G GGIG GG GG+GGLGG GGGLGG GG G GG+GVGGG GG
Sbjct: 148 GGAGL-GGVGGVG--GGIGKAGGIGGLGGLGGAGGGLGGVGGLGKAGGIGVGGGIGG 199
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1GP70 | 2.6e-45 | 89.66 | glycine-rich protein 23-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114... | [more] |
A0A6J1H8T3 | 6.0e-10 | 61.44 | acanthoscurrin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461135 PE=4 SV=1 | [more] |
A0A6P5RWK0 | 2.3e-09 | 56.90 | glycine-rich protein 5-like OS=Prunus avium OX=42229 GN=LOC110750110 PE=4 SV=1 | [more] |
A0N070 | 8.7e-09 | 55.35 | Glycine-rich protein OS=Gossypium hirsutum OX=3635 GN=GRP3 PE=2 SV=1 | [more] |
A0A5D2JY80 | 8.7e-09 | 55.35 | Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D08G241800v1 P... | [more] |
Match Name | E-value | Identity | Description | |
KAG6575962.1 | 1.7e-46 | 92.41 | hypothetical protein SDJN03_26601, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022953275.1 | 5.3e-45 | 89.66 | glycine-rich protein 23-like isoform X1 [Cucurbita moschata] >XP_022953276.1 gly... | [more] |
XP_023549420.1 | 6.5e-43 | 91.43 | glycine-rich protein 23-like [Cucurbita pepo subsp. pepo] | [more] |
KAG7014487.1 | 2.8e-17 | 54.37 | hypothetical protein SDJN02_24665, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_011659762.1 | 4.3e-10 | 61.44 | glycine-rich protein 5 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
AT1G04660.1 | 1.7e-04 | 59.83 | glycine-rich protein | [more] |