CmoCh17G011920 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G011920
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein OSB2, chloroplastic-like
Location	Cmo_Chr17: 9578362 .. 9584544 (-)
RNA-Seq Expression	CmoCh17G011920
Synteny	CmoCh17G011920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAACCCTCGGCCAAGAGTCTGGCGCGCACACAAAGGAACACAGTCGAAGATAAGAGGGAAATCGAGAGCGATGATAATGGCGGTACAGAAAACCCTAACTCTTTCTTCGTCATTTTTATCAAAGAGCTGCATCTTCTCCTTCTCTAGAAACAAGTCACGAATCGCTTCCTTCTCCCCTTTTCTCTCGCATCTGAACGCTGCTAAACACAGCCGTTTCGCTACTCGTTTCCCAAAATGCTTGGCTATGGAAAACTACAGCACTTACTCTGTTTCCTACCCCAAACCTTCCGAAATCCCATGGAAGAAGGAGCTCAGTAACTCGGTCAGTCTCATCGGGATAGTTGGTACGCCCGTGGAGCTCAAGCGCCTACCAACGGGCAAAGATGTCGCGCGGACGCGACTTGCTGTGTGGAAGTCATCTACTGAAACATCTTGGTACTAATCTAATGTTCTTTTCGAAATGGGTTTTTATGGTTACATTTTATAGAATATTGAATGATAATGTGATTTTTTTTTCGTGGGGGTGCTTATGAGGATTAAATTATTTTCGAATATGAAGAATAAGCTCTTGTGTAGTTTGGAGTTGAGATGTTAAGAATATGGAAGTTTTAGGACCATCGTTATAGACTATATTTCTGATTACGGGGGAGTGGCATCCCAAAATTGTTGTCTCAATTTCAGTAGGATTTGGAAGCCATACGAATCTTTAAATGAACTTTTGTTTCATATAAATTTTCGGGTTTTACCAAGATTGGAAGGAAGTTATTCAAATGCCTCTGTTTGGGTGTTGACAGAGAGGATGTGTGGAATTTGGCACATTCTAAAATTCTTAACAATGGAAGTTTATTGTTGGTGTTATTATGTATTTTTTACTTTTTGGCTCGTTTATCGGAGTTTTCTTGTTTGTATAGCTTTTGCTCTGTAGTTTCCATCTTACAAAAGCTTGTTTTTCAAATTAAAAAAGTGTTATTTCACTAAATCTATCCTACCATGAAGTCCACTAATCAATTGGCATTTGAAGCAAATATTATCTGCTAAAGCATTCTAGAATGATTTCATTCCAACTGTTGTTAGGATTTGCCCTGTTACCCATCTCAGCCGCCAAGTTGTTAGCTCTTTCACCATGTTTAACTGATTAATCATCCATAATTATTGTAATTTCATTGTTTATGTTTGTAATTTTTAAAAGTTGTTAAGGTATGTGGGTTATGAAGTAACGACTATTGGTTGGCCTATGGTCATTGGGACAGGTAAAGAAGAATTGTTGTTCTTGGAGGGACCAAAGTACTCAATCTCCCAACTATTTTAATTTCCTTCTAAATTCAAAATGCCGGCCTCCTCTGAAATTGTTCTTAGAGTGACTCATGTCCATTGGAATTAGCAAGGGGTTGAAGTTTAGGAAACAGTAAATAGGTAGGAAGTATGGATGATGAGACCAAGGATCTTCTAAAAATCTAAATCAAAGAATCCTGACCACCTTTAAATTTCAGGAGGTTATCCACTTTTATATCAAGAAATGAAACCCTAAGCATATTTTGAACAATGGGGACATCATTCTTATAGCTTCCTTACATATCGTCTATGAATAACTTTGCACCAAGTACCATTTGTTCATTGGCGAAGCTTATCAGTGAGGACACCTCCCACCAAGAGAGCTGAGTGCCTGAGCGCATTCCTAGGTGGAACTTTTAAAATTATGACCTTGCACTTTGGGCTTAGATGGCCATTATGCTTCAATGCACTTTAGGAAGATGCACAAGTCTTTTTGGTGAACAAACGTACTACTTCGAGTTTGTATCATCGTGTTAGTTATGTAGGACAAATGTTATTACATTATTAGAAAATTATAGTCATTAGCTAGGGATTTTATTAGAGAAGTAGTCATAAATAAAGTGTGGCTTGAGATAGGTGTATAATTGGGTATTATCTGAGGAGAGAACTAACCCTCTCTAATGCTTGGCAACCCATTGTAGTTCTAATCCATTCATTAGCCTTATCAATATCATATTTTCATTCATTTCCATTTCCTATTTTGTTTCCTATCAAATTGGTGTTAGAGCACCAACCACTAGGGAATATGCCCAACTATTTTCTAGTTATCTCCTAGGGGACCCCTTTCTAATGGTTAGTGCTGCTGATTTTTGAGGGAACAGATTCTGATATTTGGGCTTTGATAAATTTATCCAGTCAACCAGACTGAGTTAGACAAGAGATCAAAGTTTTTGCATGTTTGATGTGGTATTAAGTCTGTACCATGGATTGATAGGACTTGTGCAAACTTGGACATATATCAATTTTTCATTCTAGAATGATTTGTTCCCGTTCAAATTGAATTGTTAGTTACTAGCCATCAAGGGGTGGCGCCGTTGGTTAAGGCATGTGGTCTCTAAGTGTCGCCTACCTCATGTATTCCAATCTTCAAGTGAGCTTAATAATATGGAAAACTCTTGATGTTTCCATCTTGGGGCTGGCTCAATTGCTTTTGAATAGAGAGTTGGATAGCCACTAGTTTCCTATTGAACCTTTAAAATATTGAAATATTAAAAGTTGACACCCACAAGGAGGCATAACGACCTATAGAAAGATACTCTAATCCAACAAAATTATACTAAGATCATAATTACAAAAGACCTAGTAATTGACACCCACAAGGAGGCATTAAACTTCATCACCACCCAAACATTGTAACACGGTCTCTTCATCTCTCCAAATATCCTATTATTCTTTCAGGCTAAATGCCCCACAAGATAGCAAAACCCAGCAAATTCTCAAGTCAGACCACTCAAAAGGCAAATCGAACTGATTCACTTCTTTTGACATACCAGAAAGAAGCCTGGTAGTACCCTGGTGTGTTAGCTAGTGGGCTAAATCTTTCAAACACTTAGTTATCCTTTGTCACTCTGCTCTGTTGATTAGCATTTACGATAGCATTTTTTGTTAGCCTCCCTTTCAACTTTTGGTTCCTATCAAACTTTTGTTTTCTTTGATGATGAGAAACAAGTTAAATTAAGATAGAGAGGGAAAAGTATGGGAAAAAAAGGCATAACATTGTTGAAAGACTCCCCATTTCTTGCCAGCCAAATCTTCCACAAAGTGCTACTTTCATTCCTTTGCACGGCAGAACTTTAAACTTCAGATTTATAGAGAGATACAACATGACATTTCAATCTCGAACCGTTCAAATGTAAAGACAATTAGGACTATGACCCAGATCAATATTTCGCTCTTTCAGGATAAATTTAGCATTCTGGGATGAATTGGCACATGTTGCTTCTCAACACGTTCAGAAAGGCAACCAGATATATGTATCTGGCCGGATGGTCGCAGATGTAGCTGAAGCTGATGATGGAAAACAGCAAACTTACCATAAGGTTTTCCCGTCCTTGTTCTCATTGTTCCATGGTTTTCTGTTGATTCATGAAGTAGATTCTGATGCTTTCATATCTTTGGCAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCAACAGCCCCCCATTGTGACCAAGACTCTAATTCCGCAATGGAAGGCACGGGATACGGGATATTCTTTAATTCAAGATTATTGGTATGACACTTTGCTTCAGAATCTTATTATTTGATCCTATCAAATTTCTCCGCAGGGAAAAAGCTCGGCAGTGGTGCTGTTGATAATGTGGGGGGGTCCACACAAGAACTATGGCAAGCATTCTTTGCCAATCCCGTTAACTGGTGGGACAATAGGAAAAACAAGGTACTTGATTAATTGTTCTCTTGCAATTTTCAACATTCAAATGTCTTGTTTTTGGATTTAAATGTACTTAACATGGACCAAGTCTGGTATTTTGCTTGTGCTTTTATGTATTTTATTACTTCTAATTGTATTTTGCCATATTGATGCATAAAAAAACCTTGAGAACTTACAATGAACTGCATGACATAATAACACATAGTTTTATGTATGTTATTATTTCTATTGCAGAGGGCAGGCCTCTTGGATGCTTGCATTTTCTTAGACGAATAAATTATATAGGCTTTTTTTTGTTGAAAAAAAAGAAACAACAATAATAAAAAGGAAAATGTTCCAGGGATACGAACTCCAAAGGGGAGTGGGAATAAAGAAAGAAAAAAAAAAATCAAGAATTTATAGAAAAAGGAAAAATCAAAAACTTTGAGCCGAACACAAGCAAATAGTGGTTACCCTGCGAACAATATATTTATCCAATAAAACACTCCGCCTTCTTTGAACCAAAAACTTTTAGAGTTTGCAAATCAAGGCTGAAGTGAAGAAGGCTTCACAAACCACCCCTAAAGCAGCCGCAGCTAAAAACAAGGTTAAAACAAACACAGTCGACAGGAACACTGCCAAAAGAATCTTCAATCAGAGCTTTCTGAAAAATTGTTGGATGGATATTTACAAGTATTCAAATACCAGAAAACTAGGTGCAACCTCACAACTGTGCGAGACAAATAGCTTGAAAATCTATGCAAACAACGTGAGGGCAGCATTTTCAACACCCAAGGAACCGAGTGTAATTGAGGCTGTAAAGATTTAAAACAGAGCAGACTAGAAACAACTTATCATATGCCGAAAAGGCAAAAGCAACAACAAAGGAAGGAGCCAGCACAAGGTATTGAAAAAGCAAGCTTCCACAAGACCAAAGATCCCAAAATAAAAAGAAAAAAAAAGCACAGCCATGAAGACGATGAAATCTCTAGGAGTCCGTATGCTTGAAAACTTGAACTTCTTAATGTCTGTGATTTTATCTCGTAAACCTCAAGACCGCAGACCCTTGGGAGGGAGGAAAAATTATCTCATAATGAGTTCTCATGAATGGAGGAGTGGGACTTTGTATCAGAGAAATAATTTAAGAGGGAGGTTTATTTCTTCTAGAGAAATTTTACATAGAACCCTATCAATATCTTGTTAGATGAAATTTTATCATTCCCACTGTCAATTGGAAAATTGAAATCCAGTTCCTCACTAGTAAGACTCACCATGGATTGGTTGTCTTATTCGAGCACATCCTCCAAACATTGACTTTTTGGTTGGTCCATTTGTTGAAAATATGTCATCCTTTGACAGACCTTTGTCAACTAAGAGGCTGAAATTCCAAAAGAGGGGAACTGGGAGAAGAGTTGAATCTTGAGCCAACAGTCATCAGCAGACTATTTTTTAGTTATCATATCAAAATATTATTATTTATTGTATATATGAAATGGTGGGCCTCAATACTTGAAAAGGAAAGAAAAAGGATTACTAGCCTCCCTTTGCAGGCCATTTTAGACATCCTAAACGTCATCTTTTGTTAGTATTTTTAGGTTCCTTTCACTATATGATTCACTTGAATCCTTGATGAGAGATGAGATTCACTCTTTAATGTTAATACGCCTGCATTTTGATTCTGCTTGCAGAAGAACCCAAAATATCCAGATTTTAAACACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCTGGAATAATCCACCTTGGGTGAAGTCCCAGCTTGCACTATTGGACATGAGAATGGGTTCTCTTGATAATCAGGAAGCCAATATGGCTAACTTTGTAAACAATTTTTGATTTCCCATCTTACTGAACTGACTCTGGATTCCTTTAAATTGTTTCCAACAGGGTATTAACCAAATATATATGGAAAGATTCTCTTGTGGTTCCTGGCTTGTATGGTTTGAAAATTGATGTGCTACATGTTAGATTGATAGTAATTCAAATTTTTCTTGAGGGTCGGTACCTTTCATGATGGTATGTTGAAATATTTGTTTGTGTGTGACATTAGTTGAATAAATTGTAAATGATACTCATCTTTAATCTTTCATGTAAACGTTGCGTTTTAAAAGAAAAATGATTAAAAAGGAGAAGCTTAGAAAAGGTCAGGAGCAAAAGAGAATTCTGCAAGTACCAAAACCATGAGAACCAAGCAATTTATGTGCCAACTTTAGATACCAAAGGATCAACCCTGTTTGCTTCAGCCAATAATTTGGTTCTTCACACTGCTTAAGACTGCTTTTATAATTCCTTATGTATAACCAAGACATGCTCAAACAAAAAGAAGACCAAAAAAGAAGCTTTATGGGTCAAACACATTCTCTCTCTCTCTCTCTCTCTCTCTTCAATGATTTATTTGCCCAATAATGATCCATGAGAAAACAGAAGTCTTTGATAACTTTGGC

mRNA sequence

TGAAACCCTCGGCCAAGAGTCTGGCGCGCACACAAAGGAACACAGTCGAAGATAAGAGGGAAATCGAGAGCGATGATAATGGCGGTACAGAAAACCCTAACTCTTTCTTCGTCATTTTTATCAAAGAGCTGCATCTTCTCCTTCTCTAGAAACAAGTCACGAATCGCTTCCTTCTCCCCTTTTCTCTCGCATCTGAACGCTGCTAAACACAGCCGTTTCGCTACTCGTTTCCCAAAATGCTTGGCTATGGAAAACTACAGCACTTACTCTGTTTCCTACCCCAAACCTTCCGAAATCCCATGGAAGAAGGAGCTCAGTAACTCGGTCAGTCTCATCGGGATAGTTGGTACGCCCGTGGAGCTCAAGCGCCTACCAACGGGCAAAGATGTCGCGCGGACGCGACTTGCTGTGTGGAAGTCATCTACTGAAACATCTTGGATAAATTTAGCATTCTGGGATGAATTGGCACATGTTGCTTCTCAACACGTTCAGAAAGGCAACCAGATATATGTATCTGGCCGGATGGTCGCAGATGTAGCTGAAGCTGATGATGGAAAACAGCAAACTTACCATAAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCAACAGCCCCCCATTGTGACCAAGACTCTAATTCCGCAATGGAAGGGAAAAAGCTCGGCAGTGGTGCTGTTGATAATGTGGGGGGGTCCACACAAGAACTATGGCAAGCATTCTTTGCCAATCCCGTTAACTGGTGGGACAATAGGAAAAACAAGAAGAACCCAAAATATCCAGATTTTAAACACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCTGGAATAATCCACCTTGGGTGAAGTCCCAGCTTGCACTATTGGACATGAGAATGGGTTCTCTTGATAATCAGGAAGCCAATATGGCTAACTTTGTAAACAATTTTTGATTTCCCATCTTACTGAACTGACTCTGGATTCCTTTAAATTGTTTCCAACAGGGTATTAACCAAATATATATGGAAAGATTCTCTTGTGGTTCCTGGCTTGTATGGTTTGAAAATTGATGTGCTACATGTTAGATTGATAGTAATTCAAATTTTTCTTGAGGGTCGGTACCTTTCATGATGGTATGTTGAAATATTTGTTTGTGTGTGACATTAGTTGAATAAATTGTAAATGATACTCATCTTTAATCTTTCATGTAAACGTTGCGTTTTAAAAGAAAAATGATTAAAAAGGAGAAGCTTAGAAAAGGTCAGGAGCAAAAGAGAATTCTGCAAGTACCAAAACCATGAGAACCAAGCAATTTATGTGCCAACTTTAGATACCAAAGGATCAACCCTGTTTGCTTCAGCCAATAATTTGGTTCTTCACACTGCTTAAGACTGCTTTTATAATTCCTTATGTATAACCAAGACATGCTCAAACAAAAAGAAGACCAAAAAAGAAGCTTTATGGGTCAAACACATTCTCTCTCTCTCTCTCTCTCTCTCTTCAATGATTTATTTGCCCAATAATGATCCATGAGAAAACAGAAGTCTTTGATAACTTTGGC

Coding sequence (CDS)

ATGATAATGGCGGTACAGAAAACCCTAACTCTTTCTTCGTCATTTTTATCAAAGAGCTGCATCTTCTCCTTCTCTAGAAACAAGTCACGAATCGCTTCCTTCTCCCCTTTTCTCTCGCATCTGAACGCTGCTAAACACAGCCGTTTCGCTACTCGTTTCCCAAAATGCTTGGCTATGGAAAACTACAGCACTTACTCTGTTTCCTACCCCAAACCTTCCGAAATCCCATGGAAGAAGGAGCTCAGTAACTCGGTCAGTCTCATCGGGATAGTTGGTACGCCCGTGGAGCTCAAGCGCCTACCAACGGGCAAAGATGTCGCGCGGACGCGACTTGCTGTGTGGAAGTCATCTACTGAAACATCTTGGATAAATTTAGCATTCTGGGATGAATTGGCACATGTTGCTTCTCAACACGTTCAGAAAGGCAACCAGATATATGTATCTGGCCGGATGGTCGCAGATGTAGCTGAAGCTGATGATGGAAAACAGCAAACTTACCATAAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCAACAGCCCCCCATTGTGACCAAGACTCTAATTCCGCAATGGAAGGGAAAAAGCTCGGCAGTGGTGCTGTTGATAATGTGGGGGGGTCCACACAAGAACTATGGCAAGCATTCTTTGCCAATCCCGTTAACTGGTGGGACAATAGGAAAAACAAGAAGAACCCAAAATATCCAGATTTTAAACACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCTGGAATAATCCACCTTGGGTGAAGTCCCAGCTTGCACTATTGGACATGAGAATGGGTTCTCTTGATAATCAGGAAGCCAATATGGCTAACTTTGTAAACAATTTTTGA

Protein sequence

MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAMENYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTETSWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERSNSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPDFKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF

Homology

[Close]

BLAST of CmoCh17G011920 vs. ExPASy Swiss-Prot
Match: Q9SX99 (Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.2e-24
Identity = 77/244 (31.56%), Postives = 120/244 (49.18%), Query Frame = 0


Query: 47  SRFATRFPKCLAMENYST----YSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPT 106
           S+ ++ FPK     +  +    ++  + KP     K  L NSVSL+G V   +++  + T
Sbjct: 16  SQISSSFPKSRFFSDGESAVYHHARLFKKPLSTKLKFNLVNSVSLMGFVDRSIQV--MNT 75

Query: 107 GKD----VARTRLAVWKSSTETSWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEA 166
           G D        R+    +   +  I+L  WD +A     H++  + I VSGR+ +    +
Sbjct: 76  GPDRFGVFTILRVKDPLNPNRSFRISLRMWDAMARTCIAHLKLNDHILVSGRLESYSKSS 135

Query: 167 DD---GKQQTYHKVVVQQLNFIERSNSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQEL 226
            D   G    Y +V V ++N++    +  P    DS  +   K      ++        L
Sbjct: 136 SDVYSGLNLDY-QVKVAEVNYV----AAPPSHVLDSQISKNPKTKTEDDIEESKKDEIYL 195

Query: 227 WQAFFANPVNWWDNRKNKKNPKYPDFKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSL 280
           WQ FF+NP +WWDNR+NKKNPK PDFKHKDTGEALW+   + P W+  +L L D +    
Sbjct: 196 WQVFFSNPYDWWDNRRNKKNPKQPDFKHKDTGEALWLCS-DLPDWITRRLELFDQKNRFY 251

[Close]

BLAST of CmoCh17G011920 vs. ExPASy Swiss-Prot
Match: Q8GXH3 (Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 2.4e-23
Identity = 72/209 (34.45%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 70  PKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTETS-WINLAFW 129
           P+P+EI ++ E++N V+LIG V  PV+ +    GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 130 DELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIE-RSNSTAPHC 189
            +LA  A+++V K +QI+VSG++  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 190 DQDSNSAMEG---KKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKN----PKYPD 249
              S+   E    K+      D V     + W     NP  WWD+R+NK N    P++PD
Sbjct: 206 VMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 250 FKHKDTGEALWVEGWNNPPWVKSQLALLD 270
           FK KD+  +LW+     P WV  +L  L+
Sbjct: 266 FKSKDSSFSLWLN--KAPNWVLPKLEGLE 292

[Close]

BLAST of CmoCh17G011920 vs. ExPASy Swiss-Prot
Match: Q8GWJ4 (Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB3 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.5e-20
Identity = 70/212 (33.02%), Postives = 109/212 (51.42%), Query Frame = 0


Query: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120
           N +T   S P P +I +K E+SN ++LIG V  PV+      GK  A T ++    S  +
Sbjct: 61  NVATEKESTP-PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSS 120

Query: 121 S-WINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIER 180
           + WI + F  +LA +A QHV+K ++I+VSG++  D    +    Q+  +V+VQ LNF++ 
Sbjct: 121 NFWIPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQA 180

Query: 181 SNSTAPHCD--QDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKN-- 240
           + ST       +   ++++ K   S  V  +   T   W+    NP  W D+R NK N  
Sbjct: 181 ATSTTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGL 240

Query: 241 --PKYPDFKHKDTGEALWVEGWNNPPWVKSQL 266
             P +PDFK K  G +LW+     P W   +L
Sbjct: 241 VKPGHPDFKMKVGGLSLWLS--TAPDWALLKL 269

[Close]

BLAST of CmoCh17G011920 vs. ExPASy Swiss-Prot
Match: Q9FYJ2 (Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.2e-20
Identity = 69/227 (30.40%), Postives = 114/227 (50.22%), Query Frame = 0


Query: 66  SVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTETS---- 125
           S  +P+P E+P++ +++NS+ LIG V  PV+      GK  A T ++   SS   S    
Sbjct: 56  SEEWPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDS 115

Query: 126 ----WINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTY----------- 185
               WI + F  +LAH A+ +++K ++++++G+++ DV ++     Q +           
Sbjct: 116 SSNFWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSF 175

Query: 186 -HKVVVQQLNFIERSNS---TAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFAN 245
            H+V+V+ L++IE S +     P  DQ+     EG    S +V         LW      
Sbjct: 176 SHQVMVRDLHYIEGSKAMPKVLPTLDQN-----EGVLKHSASVQRGREFGTNLWFDLVDK 235

Query: 246 PVNWWDNRKNKK----NPKYPDFKHKDTGEALWVEGWNNPPWVKSQL 266
           P  W D R+ K+    NPK+PDFK KD  +ALW+   N P  + S+L
Sbjct: 236 PNEWCDYREMKQNGSVNPKHPDFKKKDGSQALWLN--NAPTEILSEL 275

[Close]

BLAST of CmoCh17G011920 vs. ExPASy Swiss-Prot
Match: Q8Y2B4 (Single-stranded DNA-binding protein OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=ssb PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06
Identity = 39/140 (27.86%), Postives = 65/140 (46.43%), Query Frame = 0


Query: 83  NSVSLIGIVGTPVELKRLPTGKDVARTRLAVW-----KSSTE----TSWINLAFWDELAH 142
           N V ++G +G   E + +P+G  V   R+A       K+S E    T W  +AF+  LA 
Sbjct: 5   NKVIIVGNLGADPETRYMPSGDAVTNIRVATTDRYKDKASGEMREATEWHRIAFFGRLAE 64

Query: 143 VASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERSNSTAPHCDQDSNS 202
           +A ++++KG+Q+YV GR+     E  DG++Q   ++V +Q+  +                
Sbjct: 65  IAGEYLKKGSQVYVEGRLKTRQWE-KDGQKQYSTEIVAEQMQMLGSRQGMGGEGGGGGGG 124

Query: 203 AMEGKKLGSGAVDNVGGSTQ 214
              G+  G G     GG  Q
Sbjct: 125 YSRGESSGGGGYG--GGRAQ 141

[Close]

BLAST of CmoCh17G011920 vs. ExPASy TrEMBL
Match: A0A6J1GQ31 (protein OSB2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456464 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 5.5e-164
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60
           MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME
Sbjct: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60

Query: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120
           NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET
Sbjct: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERS 180

Query: 181 NSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 290
           FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF
Sbjct: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 289

[Close]

BLAST of CmoCh17G011920 vs. ExPASy TrEMBL
Match: A0A6J1JVR7 (protein OSB2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487976 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 4.4e-153
Identity = 271/289 (93.77%), Postives = 279/289 (96.54%), Query Frame = 0


Query: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60
           MIMAV+KTLTLSSSFLSK+CIFSFSRNKSR+ASFS F SHLNAAKHSRFATRF KCLAME
Sbjct: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60

Query: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120
           NYS YSVSYPKPSEIPWKKELSNSVSLIG VGTPVELK LP+GKDVARTRLAVWKSSTET
Sbjct: 61  NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQH+QKGNQIYVSGRMVADV EADDGKQQTYHKVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS 180

Query: 181 NSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NS APHCDQDSNSAMEG+KLGSGAVDN+GGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 290
           FKHKDTGEALWVEG NNPPWVKSQLALLDMRMGSLD+QEA MANFVNNF
Sbjct: 241 FKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 289

[Close]

BLAST of CmoCh17G011920 vs. ExPASy TrEMBL
Match: A0A1S3BRV3 (protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 9.8e-129
Identity = 235/290 (81.03%), Postives = 256/290 (88.28%), Query Frame = 0


Query: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60
           M +A+++TLTLSSSF SK+ IFS  RN+ RI+SF PF S+LN  KH RFATRFPKC AME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 61  NYSTYS-VSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTE 120
           NY+ YS V+YPKPSEIPWKKELSNSV+LIG VG PVELK LP+GKDVA TRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 121 TSWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIER 180
           TSWI+L FWDELAH+ASQHVQKGNQIYVSGR+VAD+ EADDGKQQTY+KVVVQQLNFIER
Sbjct: 123 TSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 182

Query: 181 SNSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYP 240
           SNSTAPH DQDSNS M G+K  SGAVDN   STQELWQAFFANPV+WWDNRKNKKNPKYP
Sbjct: 183 SNSTAPHYDQDSNSIMAGRKPSSGAVDNT-ASTQELWQAFFANPVDWWDNRKNKKNPKYP 242

Query: 241 DFKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 290
           DFKHKDTGEALWVEG  NPPWVKSQLALLDMRM SLD+QE  M NFV+NF
Sbjct: 243 DFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNF 291

[Close]

BLAST of CmoCh17G011920 vs. ExPASy TrEMBL
Match: A0A5D3DR47 (Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.7e-128
Identity = 234/290 (80.69%), Postives = 256/290 (88.28%), Query Frame = 0


Query: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60
           M +A+++TLTLSSSF SK+ IFS  RN+ RI+SF PF S+LN  KH RFATRFPKC AME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 61  NYSTYS-VSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTE 120
           NY+ YS V+YPKPSEIPWKKELSNSV+LIG VG PVELK LP+GKDVA TRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 121 TSWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIER 180
           TSWI+L FWDELAH+ASQHVQKGNQIYVSGR+VAD+ EADDGKQQTY+KVVVQQLNFIER
Sbjct: 123 TSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 182

Query: 181 SNSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYP 240
           SNSTAPH DQDSNS M G+K  SGAVDN   STQELWQAFFANPV+WWDNRKNKK+PKYP
Sbjct: 183 SNSTAPHYDQDSNSIMAGRKPSSGAVDNT-ASTQELWQAFFANPVDWWDNRKNKKSPKYP 242

Query: 241 DFKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 290
           DFKHKDTGEALWVEG  NPPWVKSQLALLDMRM SLD+QE  M NFV+NF
Sbjct: 243 DFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNF 291

[Close]

BLAST of CmoCh17G011920 vs. ExPASy TrEMBL
Match: A0A0A0K4W2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 3.1e-127
Identity = 233/290 (80.34%), Postives = 254/290 (87.59%), Query Frame = 0


Query: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60
           M+MA+++TL LSSS  SK+ IFS  RN+  I+SF PF S+LN  KH RF   FPKC AME
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 60

Query: 61  NYSTYS-VSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTE 120
           NY+ YS V+YPKPS+IPWKKELSNSV+LIG VG PVELK LP+GKDVA TRLAVWKSSTE
Sbjct: 61  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 120

Query: 121 TSWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIER 180
           TSWI L FWDELAH+ASQHVQKGNQIYVSGR+VAD+ EADDGKQQTY+KVVVQQLNFIER
Sbjct: 121 TSWIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180

Query: 181 SNSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYP 240
           SNSTAPH DQDSNS M G+K GSGAVDN  GSTQELWQAFFANPV+WWDNRKNKKNPKYP
Sbjct: 181 SNSTAPHYDQDSNSIMAGRKPGSGAVDNT-GSTQELWQAFFANPVDWWDNRKNKKNPKYP 240

Query: 241 DFKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 290
           DFKHKDTGEALWVEG  NPPWVKSQLALLDMRMGSLD+QEA MANFV +F
Sbjct: 241 DFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMGSLDDQEAKMANFVTSF 289

[Close]

BLAST of CmoCh17G011920 vs. NCBI nr
Match: XP_022954097.1 (protein OSB2, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 586.6 bits (1511), Expect = 1.1e-163
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60
           MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME
Sbjct: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60

Query: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120
           NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET
Sbjct: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERS 180

Query: 181 NSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 290
           FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF
Sbjct: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 289

[Close]

BLAST of CmoCh17G011920 vs. NCBI nr
Match: KAG6575942.1 (Protein OSB1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 564.7 bits (1454), Expect = 4.6e-157
Identity = 277/289 (95.85%), Postives = 283/289 (97.92%), Query Frame = 0


Query: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60
           MIMAV+K LTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME
Sbjct: 1   MIMAVEKALTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60

Query: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120
           NYSTYSVSYPKPSEIPWKKELSNSVSLIG VG PVELK LP+GKDVA TRLAVWKSSTET
Sbjct: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGTVGAPVELKHLPSGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQHVQKGNQIYVSG+MVA+V EADDGKQQTY+KVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGQMVANVVEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 NSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NSTAPHCDQDSN+AMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSTAPHCDQDSNTAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 290
           FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF
Sbjct: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 289

[Close]

BLAST of CmoCh17G011920 vs. NCBI nr
Match: XP_023549001.1 (protein OSB2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 553.1 bits (1424), Expect = 1.4e-153
Identity = 272/289 (94.12%), Postives = 279/289 (96.54%), Query Frame = 0


Query: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60
           MIMAV+KTL LSSSFLSK+CIFSFSRNK RIASFSP LSHLNAAKHSRFATRFPKCLAME
Sbjct: 1   MIMAVEKTLILSSSFLSKNCIFSFSRNKLRIASFSPLLSHLNAAKHSRFATRFPKCLAME 60

Query: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120
           NYSTYSVSYPKPSEIPWKKELSNSVSLIG VG PVELK LP+GKDVA TRLAVWKSSTET
Sbjct: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGTVGAPVELKHLPSGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQHVQKGNQIYVSG+MVA+V EADDGKQQTY+KVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGQMVANVIEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 NSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NSTAPHCDQDSN+AMEGKKL SGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSTAPHCDQDSNTAMEGKKLDSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 290
           FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEA MANFVNNF
Sbjct: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEAKMANFVNNF 289

[Close]

BLAST of CmoCh17G011920 vs. NCBI nr
Match: XP_022991273.1 (protein OSB2, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 550.4 bits (1417), Expect = 9.0e-153
Identity = 271/289 (93.77%), Postives = 279/289 (96.54%), Query Frame = 0


Query: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60
           MIMAV+KTLTLSSSFLSK+CIFSFSRNKSR+ASFS F SHLNAAKHSRFATRF KCLAME
Sbjct: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60

Query: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120
           NYS YSVSYPKPSEIPWKKELSNSVSLIG VGTPVELK LP+GKDVARTRLAVWKSSTET
Sbjct: 61  NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQH+QKGNQIYVSGRMVADV EADDGKQQTYHKVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS 180

Query: 181 NSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NS APHCDQDSNSAMEG+KLGSGAVDN+GGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 290
           FKHKDTGEALWVEG NNPPWVKSQLALLDMRMGSLD+QEA MANFVNNF
Sbjct: 241 FKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 289

[Close]

BLAST of CmoCh17G011920 vs. NCBI nr
Match: KAG7014475.1 (Protein OSB1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 534.6 bits (1376), Expect = 5.1e-148
Identity = 267/289 (92.39%), Postives = 272/289 (94.12%), Query Frame = 0


Query: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60
           MIMAV+K LTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME
Sbjct: 1   MIMAVEKALTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60

Query: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120
           NYSTYSVSYPKPSEIPWKKELSNSVSLIG VG PVELK LP+GKDVA TRLAVWKSSTET
Sbjct: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGTVGAPVELKHLPSGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQHVQKGNQIYVSG+MVA+V EADDGKQQTY+KVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGQMVANVVEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 NSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NSTAPH           KKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSTAPH----------WKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 290
           FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF
Sbjct: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 279

[Close]

BLAST of CmoCh17G011920 vs. TAIR 10
Match: AT4G20010.2 (plastid transcriptionally active 9 )

HSP 1 Score: 112.8 bits (281), Expect = 4.5e-25
Identity = 73/209 (34.93%), Postives = 112/209 (53.59%), Query Frame = 0


Query: 70  PKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTETS-WINLAFW 129
           P+P+EI ++ E++N V+LIG V  PV+ +    GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 130 DELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIE-RSNSTAPHC 189
            +LA  A+++V K +QI+VSG++  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 190 DQDSNSAMEG---KKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKN----PKYPD 249
              S+   E    K+ G    D V     + W     NP  WWD+R+NK N    P++PD
Sbjct: 206 VMSSSEKEESGIKKQPGIAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 250 FKHKDTGEALWVEGWNNPPWVKSQLALLD 270
           FK KD+  +LW+     P WV  +L  L+
Sbjct: 266 FKSKDSSFSLWLN--KAPNWVLPKLEGLE 292

[Close]

BLAST of CmoCh17G011920 vs. TAIR 10
Match: AT1G47720.1 (Primosome PriB/single-strand DNA-binding )

HSP 1 Score: 112.5 bits (280), Expect = 5.8e-25
Identity = 77/244 (31.56%), Postives = 120/244 (49.18%), Query Frame = 0


Query: 47  SRFATRFPKCLAMENYST----YSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPT 106
           S+ ++ FPK     +  +    ++  + KP     K  L NSVSL+G V   +++  + T
Sbjct: 16  SQISSSFPKSRFFSDGESAVYHHARLFKKPLSTKLKFNLVNSVSLMGFVDRSIQV--MNT 75

Query: 107 GKD----VARTRLAVWKSSTETSWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEA 166
           G D        R+    +   +  I+L  WD +A     H++  + I VSGR+ +    +
Sbjct: 76  GPDRFGVFTILRVKDPLNPNRSFRISLRMWDAMARTCIAHLKLNDHILVSGRLESYSKSS 135

Query: 167 DD---GKQQTYHKVVVQQLNFIERSNSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQEL 226
            D   G    Y +V V ++N++    +  P    DS  +   K      ++        L
Sbjct: 136 SDVYSGLNLDY-QVKVAEVNYV----AAPPSHVLDSQISKNPKTKTEDDIEESKKDEIYL 195

Query: 227 WQAFFANPVNWWDNRKNKKNPKYPDFKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSL 280
           WQ FF+NP +WWDNR+NKKNPK PDFKHKDTGEALW+   + P W+  +L L D +    
Sbjct: 196 WQVFFSNPYDWWDNRRNKKNPKQPDFKHKDTGEALWLCS-DLPDWITRRLELFDQKNRFY 251

[Close]

BLAST of CmoCh17G011920 vs. TAIR 10
Match: AT4G20010.1 (plastid transcriptionally active 9 )

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-24
Identity = 72/209 (34.45%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 70  PKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTETS-WINLAFW 129
           P+P+EI ++ E++N V+LIG V  PV+ +    GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 130 DELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIE-RSNSTAPHC 189
            +LA  A+++V K +QI+VSG++  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 190 DQDSNSAMEG---KKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKN----PKYPD 249
              S+   E    K+      D V     + W     NP  WWD+R+NK N    P++PD
Sbjct: 206 VMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 250 FKHKDTGEALWVEGWNNPPWVKSQLALLD 270
           FK KD+  +LW+     P WV  +L  L+
Sbjct: 266 FKSKDSSFSLWLN--KAPNWVLPKLEGLE 292

[Close]

BLAST of CmoCh17G011920 vs. TAIR 10
Match: AT5G44785.2 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-21
Identity = 70/212 (33.02%), Postives = 109/212 (51.42%), Query Frame = 0


Query: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120
           N +T   S P P +I +K E+SN ++LIG V  PV+      GK  A T ++    S  +
Sbjct: 61  NVATEKESTP-PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSS 120

Query: 121 S-WINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIER 180
           + WI + F  +LA +A QHV+K ++I+VSG++  D    +    Q+  +V+VQ LNF++ 
Sbjct: 121 NFWIPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQA 180

Query: 181 SNSTAPHCD--QDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKN-- 240
           + ST       +   ++++ K   S  V  +   T   W+    NP  W D+R NK N  
Sbjct: 181 ATSTTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGL 240

Query: 241 --PKYPDFKHKDTGEALWVEGWNNPPWVKSQL 266
             P +PDFK K  G +LW+     P W   +L
Sbjct: 241 VKPGHPDFKMKVGGLSLWLS--TAPDWALLKL 269

[Close]

BLAST of CmoCh17G011920 vs. TAIR 10
Match: AT5G44785.1 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-21
Identity = 70/212 (33.02%), Postives = 109/212 (51.42%), Query Frame = 0


Query: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120
           N +T   S P P +I +K E+SN ++LIG V  PV+      GK  A T ++    S  +
Sbjct: 61  NVATEKESTP-PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSS 120

Query: 121 S-WINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIER 180
           + WI + F  +LA +A QHV+K ++I+VSG++  D    +    Q+  +V+VQ LNF++ 
Sbjct: 121 NFWIPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQA 180

Query: 181 SNSTAPHCD--QDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKN-- 240
           + ST       +   ++++ K   S  V  +   T   W+    NP  W D+R NK N  
Sbjct: 181 ATSTTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGL 240

Query: 241 --PKYPDFKHKDTGEALWVEGWNNPPWVKSQL 266
             P +PDFK K  G +LW+     P W   +L
Sbjct: 241 VKPGHPDFKMKVGGLSLWLS--TAPDWALLKL 269

The following BLAST results are available for this feature:

BLAST of CmoCh17G011920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX99	8.2e-24	31.56	Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1	[more]
Q8GXH3	2.4e-23	34.45	Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2	[more]
Q8GWJ4	1.5e-20	33.02	Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB...	[more]
Q9FYJ2	4.2e-20	30.40	Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1	[more]
Q8Y2B4	1.6e-06	27.86	Single-stranded DNA-binding protein OS=Ralstonia solanacearum (strain GMI1000) O...	[more]

BLAST of CmoCh17G011920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQ31	5.5e-164	100.00	protein OSB2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456464 P...	[more]
A0A6J1JVR7	4.4e-153	93.77	protein OSB2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487976 PE=...	[more]
A0A1S3BRV3	9.8e-129	81.03	protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV...	[more]
A0A5D3DR47	3.7e-128	80.69	Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 P...	[more]
A0A0A0K4W2	3.1e-127	80.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1	[more]

BLAST of CmoCh17G011920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954097.1	1.1e-163	100.00	protein OSB2, chloroplastic-like [Cucurbita moschata]	[more]
KAG6575942.1	4.6e-157	95.85	Protein OSB1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023549001.1	1.4e-153	94.12	protein OSB2, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022991273.1	9.0e-153	93.77	protein OSB2, chloroplastic-like [Cucurbita maxima]	[more]
KAG7014475.1	5.1e-148	92.39	Protein OSB1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh17G011920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20010.2	4.5e-25	34.93	plastid transcriptionally active 9	[more]
AT1G47720.1	5.8e-25	31.56	Primosome PriB/single-strand DNA-binding	[more]
AT4G20010.1	1.7e-24	34.45	plastid transcriptionally active 9	[more]
AT5G44785.2	1.0e-21	33.02	organellar single-stranded DNA binding protein 3	[more]
AT5G44785.1	1.0e-21	33.02	organellar single-stranded DNA binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 81..207 e-value: 1.4E-21 score: 79.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..202
None	No IPR available	PANTHER	PTHR10302:SF15	OS03G0633900 PROTEIN	coord: 23..284
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 83..176 e-value: 2.1E-18 score: 66.3
IPR000424	Primosome PriB/single-strand DNA-binding	PROSITE	PS50935	SSB	coord: 81..178 score: 21.768007
IPR000424	Primosome PriB/single-strand DNA-binding	CDD	cd04496	SSB_OBF	coord: 85..177 e-value: 1.06493E-20 score: 82.6601
IPR011344	Single-stranded DNA-binding protein	TIGRFAM	TIGR00621	TIGR00621	coord: 83..195 e-value: 2.0E-17 score: 62.0
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 23..284
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 83..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G011920.1	CmoCh17G011920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006264	mitochondrial DNA replication
biological_process	GO:0051096	positive regulation of helicase activity
biological_process	GO:0006260	DNA replication
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0003697	single-stranded DNA binding