CmoCh17G011840 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh17G011840
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionJmjC domain-containing protein
LocationCmo_Chr17: 9506387 .. 9512654 (-)
RNA-Seq ExpressionCmoCh17G011840
SyntenyCmoCh17G011840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTGGAGATCTTTATCGGAGTGGATTTCGTACAATGGCGGCCTTGGCAATCTACAGGTTGTATTTCAACGTTCCCGCTGTAAGCTAGCTTGTTTTGATATATATATATATATATTTTACAATTTAATCCTTGTAATTAAAAAGACGTAATCAATAAGTGCCTTGTCAAAGATTCCTCTGTAATTCAGCCATAGGAATAAGTTGGCATTTACCAATGCATAGGTAACTCCAAATAAGATTTGTAATGAATTTGTTGATGTAAAACATTTAACCGTTACATTTTTTAACAAGTACGAGGAGAATGTTGCTGTAAAGAAAAGTAGGAAGACTAGAACGTTATAAATGTCATAATATTGGGACTCTCGTGGAGTATTGTGCTTAAGATCAAGTTATTCTGGCCTATGTTTGAAAGCTTGTAAGCTATGATCACTAACTGTATGATGAAAATTTATAGATTGAGTTTGAATACTCAGTATCTCCATGAATATTGCATTATGCTTTTTTCTCATTAAGGCTATTGTGATAGAGTTGGGTTTGACATCTTTAAAATTAAGGTCAGAACGAAGTTTTGCATGTGCCTTGTTCTCTTGCTGACATGAATGAAACAAAGAACCATGAGCATGTCGTACCAAGTATCAGAAGGTTGGGTAAAGTTCTCTTCCCCACTCTAGATTTCTCAATAGTGTTTTTAACTCTCTCATAAGTGAGAGAATAGGGTTTAGAAGTTGCATTTTAAATTTGGTGGTTGAGGCAATTTGGTATATTGATCTTTGTTATTAATTGCCAGATCAAGGAGTTCAATGTTTGAGTCAATTACTTGAAGGTGGGGATTTGAGAGAAAAAGAGCTAAGGGAAGAAACTTATTCTCATAGGCTTATTACTATAGTTCATGACCACATAAGCGCTTCCGATCAAATTAAACACCTACAATCAAGTTCTACAAAAGGTTCTGCAGATGAGGTGGAGAGGATGGAGATGACTAGTTTACAGAGCTTGGAGAACGATCAAATAGCTACCTTTATTTGGAATTTGGAACCATGTATTCTTCAAAAGTTCCTTCTCACCACGGCGGTGATTTCTTTTGACTTCCCCATTACATTTACAAGGTTGAAATTGTTTTCATGGAAGGCCTTGAGGAAACTAGTTTATTCCAATTGTTCTGGTCTAATTAATATACTAAGCTTTCTCATTATTGAAATAGATGCATGAATATATTCGATGGATGTCGAACTATTTGTTTTAGTCGATAGATGTGTGAAATTATTCCTCTTTTTCTTGTTTTCCCCTTCTTTGTTTCTTCCTTAGCTTGTCATCTTATCCTACTTTCTTTTCCATCTATAATGACTTCCCAAGAACTCTAGAGGCTCTTATACTGCACTTGCCTTCTCCAGTTGGAGCAGAAGTTCTTACTCGAAAATTTGATTAGATGGATCAAGGAAACACCGATGAGGATCAGTTTATTATATTCTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCTATTATTATGGATTCTGTGGGAGATGTTTTACTTTTGGCTGATATCTCTTCATCCCTGGAAAAGACTCTACGGGGTTTTCTATAGTTCATTTGATGATCAATTTGCTGCGACGGATGCAATTCTATACAGGAAAGAGTCTTTTGCTCGTCAGGTCATGGTAACTCTATTTAACAGTAACATTTTTATTATTTATTATTTATTTTACTTCAACCATGATATCTCCCCTGTTTATCGTAGTAATAGCTCTGTGTAATTTGTTTTTAATCATAGGTAGGATTTTTCTTCTATGTTTTTTTCTCTTTTCCCGGAACAAAATACTGAGCACACAAGTAGATGGTAATAGTTATTGGTCTCGAAGGCAATCTTTGTGGGCTAGTAACAAAAGCTCTTCTCACATCTTTATCTCGTCCTCCATAAATTTGGCTGGCCTCAAATTGCAAACAGCATTCTGCATTTTTGTGCTCATCTTTTGTTCTTGTGAAATATCTTATTTGGCTTATTAGTTAGACACTTCTATGTAGCTTTCACGCAACCTTGAAGAATGGGCAGCATATTTGCTCAACCAAAACCGCCAAACTTCGGCGATAAATTTGATTTAGGTACTGTTACATAAGTTGATCTTGCAAAGATCCTAATGAATTATTGTGTTTGGCTTCAAGGAACTGCAAATCTTTTCTTTTTTTTGGTTGTTAACTTTTCTGTTTCAAGACTAGAAGCAATTTATTTAATTTTTAAAACTTCAGTTTGATTAAGTGCCTAAACTGAGTTCTTTCTTCTCACAGCCTTAAATATCTTAAATATCTGTTCCCTTCCGTGAATTTGGTATCTATTGATAATTTTGAATCTTAACGAATGCGCATGCTCTCTGCCCGCAGTTTTCTATTTGTGTCTATATATATTTTTTAATTTAATACGCCATTTCAGTTTCTGTGTTTTGAAGGGAAGCATATTTATTTCCATTCCGCATTTATTTATTTTAAAAACATCATTATTGTCGTCACCAAAGAATAGACACAACTAGCCAACCTGCATATTCATTAGGACTTCTTTTTATTCCCTCCCTAATAAATAAGCATGACCAGAGAATATTCTGCTGCAACGCTTTGAGACTTTACTTGTTGTGTTATTGTAATTTAACTTTAATTTTTGCGTCAGGCGTTCAAGAGTGTGCTGGATAAATACTTGGGAGTAAACTTAAATGGGCCAAATCCGGGATCTTGAAGGGGAAGTCCTTTAAAGAAATTGGTCCTGCAGATTCTGGAGCATATCGATGCTATCCATTTTCTAAGCTTTTCCTCGATTGGTACTTTTACGTATAAGTTATCCATAGCTATATAGAATAAAAATCATTACCTATTTTAGGCATTGCTTTGTAATTTATTTCAGACCCATTTTATTTTGTATAGAGAACAAAGTAGAGAGTGGCTTAAAATCAACGTGATTTAAGTTTCAACTTTATACTCCCAGTATCTCCATTTATCATCAAGTGTTTACATAAAAACTGCCGAAGTAAACCAGCAGCGAATGGACCTTTACTTTTACCTCATTTCTTCTAGCCAATGAAATCAAATTCCTGTAGTGAATAAGGTTAATGAGCTAAAATATCGTAGTTCAGGAGAAATGATGTAAGCAGCAAGTGAACCTAAATGCTCTTTCCTGGTACTTGAGTTGATGATTGGATTACCTAGCAGCTTCTGTTTATCTACAGATGAGACTGACAAGTACATTAGAATGCACAGGCAATGACCCCATTTTCAATTACTCTCCTATTTTGACCCTTTCCCCCCTATGATATGTCATTATTCTTCTGGCTGTATGTGAACTGAACTTGCTAAGATGACAACAAGGGTAGGAAAACCATTCTGATAGGCCTAGTTAGAACGAAAAAGAACATTGTGGAGGGATATAGATAGGGAATGTAATTAGTAATGAATATTCGTTTCTTGTAGAGTGGGGAGTTCCAAGATGGGATTTAGAAAAAAAGATGAGGGGTAGCATAGGGGTCTGCAGTAGAAGGGGGGAAAAAAAGGAAAGAAAAGCATTGGAAAGAAGGGTCTGTAAATAATCGAGATTGGAAGGAAGAAAAGAGGGAAAAGAAAAGGTAGCTGAGATGAGATTCCCTGATGGATGATGACATGGGCAGGTAATTTAATAGAAGAAGAGGCAAGGGGAGAGGGAATAGAAGCCTTTTGATTTTTGTCTGTTTGTGCAGCTCAAAGGGAGATAAAAAAAAAAAAAAGAAAAAAAAAGATGCAGTCTTTTTTACCAGGCAAATGGCATATTGTACCTTAATCCTGTTACTCATGCACATACTTTCTAAAAGCTAGGATATACCATAATGCCCAACCCTCCTTTCATTAATCCCCAGGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTTTTTGTCTCTCCCTGCTCTCTCTCTTTCTTTCTTTGTGAATATCCTAACCTTTTCTTTGGTTAAGTTGATCAGCTTTGCCATTTTTTAAACTGCGTGTGTGGTTTTTTTTTTTTATAAAAAAAGATATTCCAAAACCCTTTTATCCAAAGTAAGCTGACTGGCATTTTTACGTGGCTGCAGGAATCACATAAAGGTAGATGCACCACTTTGCATTATCACCATGGCTTTTTACTCTCATCAGCTTGGGAGAATATAAAATATATACACATACTAAGCTGATTGAACCTCTGGTAAATTCCTGTGCTATCTTTTCTTCTGCTTCAACATGAAGTAAAATATATACACATTGGTTGGTTGAATGTTCACATTTCTATCCTATAATTACACTCATATTCCGATCAAATATTAGGAAAGTCTAGTCATAGAACATGAGAATGTATCCATATAAAAAATCTTCCCCTTTTTTGTTTGACAGTAAAGTATCTGATTTCTTTTCAGGCATGCTGAAGAATATGTTGCATCAATGATTGATATGATTATCTGATAACAGTAGACTAGAAAAGCAGAGAAGGACAAGGTTTTAGTCAATAATTGGGATGTTATTGCAGGTTAAGCTGGCTACTAAAGGTTGTGTTGTGGGGAATATGCACAGAAATTGATAAAGCCCCTCTTAGCAACAACAGTAACAAAAGAAAGACTCACCACAGAATTGCAATTCAATCTTCCAGAGCTCTTTGTTGGTATCATTTTCATCCCCGTTGACATTTTCTTCTTCTTCTTTTTTTTTTTTCTTTATTTTCCTTTTCTTCCTTTAGGTGTTAGTTTGCAGCAGCACCCAAATCCCGGACCACCACCACAAACACTCGCTCACTGAGGCACAAATCCACATAACACCATCAACTTAGGTTGCCTTTATTTTTTAAGAGAGGAAAAAAAGAAAAAAACACTCGCACTTGCAACTAAATTTTACTGCTCCCTCCATCTGACTTCACAAAAGGCTTCTCTATTCAAATAGTTCCAGTAATTTCTCAGTTCCTCTAGAAAAGTTGTGAAGGGGAAAAGAAAAAAAAAACATCTTGGGATTTGATTTTTTCAACTGGAATTTCACCCATGATGTGGAAAAAGAATGTTTTGCCCGTTCTTGCCTGTAATGGTAATAAGGTTGAATATCCAACTTGTTAGGAATCACAAATCTCCACTCCACTTTAAGTATAAACTCTTATGGTTTTACTTTTGGTTTTCCCGAAAAGCCTCGTATCAATAGAGATGTATTCCTTACTTATAAACCCATGATCATTTCCTTAATTAGCCAATGTAGAACTGCCTCCCAACAATTCTCAACACGACTGATAGGACAAATGTGAGTTTTAACCGTCCAAAGATAGGTTCTACAAGGCCTAAGTCCAATATGCCATATTTTGAGTTTGTGAGGAATAATTTTCAAAGTCCTGTTTCAAAACAGACTCCTAGTCATCTTAAGTATAAAACTAGGTAACTTTAAATGAACCACTTTAAATTTGTCATTTTTTACTTGGTCACCACAAGCCTCCAATCTTGATCATTACAATACATTATGAAAAAAGAGGCTGGAAGGAGGAAGAGAGTGGCATCGCTGTCGCACAAATGGTGGGTTTGGGGTCCTCTGTAGAGCAGTAGGGGCCATAACCATTAACCACACTGGTCGCTCTCGAAGAGTACACGCATTGGCTCCCACCACCGACATCTCCCTTTGTCCACATCCCAATATTACTTCTCCTCCTTTCTTATTCCCATTACTTTTCTTATAGGCTCTGAGTTTTTCCCAATAATCATGTGGGAATTCGGTCAATCCGATTCTATATGAATTTGACT

mRNA sequence

ATGGACTGGAGATCTTTATCGGAGTGGATTTCGTACAATGGCGGCCTTGGCAATCTACAGGTTGTATTTCAACGTTCCCGCTATCAAGGAGTTCAATGTTTGAGTCAATTACTTGAAGGTGGGGATTTGAGAGAAAAAGAGCTAAGGGAAGAAACTTATTCTCATAGGCTTATTACTATAGTTCATGACCACATAAGCGCTTCCGATCAAATTAAACACCTACAATCAAGTTCTACAAAAGGTTCTGCAGATGAGGTGGAGAGGATGGAGATGACTAGTTTACAGAGCTTGGAGAACGATCAAATAGCTACCTTTATTTGGAATTTGGAACCATGTATTCTTCAAAAGTTCCTTCTCACCACGGCGGTGATTTCTTTTGACTTCCCCATTACATTTACAAGTTCATTTGATGATCAATTTGCTGCGACGGATGCAATTCTATACAGGAAAGAGTCTTTTGCTCGTCAGGTCATGGGGAAGTCCTTTAAAGAAATTGGTCCTGCAGATTCTGGAGCATATCGATGCTATCCATTTTCTAAGCTTTTCCTCGATTGGCATGCTGAAGAATATGTTGCATCAATGATTGATATGATTATCTGATAACAGTAGACTAGAAAAGCAGAGAAGGACAAGGTTTTAGTCAATAATTGGGATGTTATTGCAGGTTAAGCTGGCTACTAAAGGTTGTGTTGTGGGGAATATGCACAGAAATTGATAAAGCCCCTCTTAGCAACAACAGTAACAAAAGAAAGACTCACCACAGAATTGCAATTCAATCTTCCAGAGCTCTTTGTGTTAGTTTGCAGCAGCACCCAAATCCCGGACCACCACCACAAACACTCGCTCACTGAGGCACAAATCCACATAACACCATCAACTTAGGTTGCCTTTATTTTTTAAGAGAGGAAAAAAAGAAAAAAACACTCGCACTTGCAACTAAATTTTACTGCTCCCTCCATCTGACTTCACAAAAGGCTTCTCTATTCAAATAGTTCCAGTAATTTCTCAGTTCCTCTAGAAAAGTTGTGAAGGGGAAAAGAAAAAAAAAACATCTTGGGATTTGATTTTTTCAACTGGAATTTCACCCATGATGTGGAAAAAGAATGTTTTGCCCGTTCTTGCCTGTAATGGTAATAAGGTTGAATATCCAACTTGTTAGGAATCACAAATCTCCACTCCACTTTAAGTATAAACTCTTATGGTTTTACTTTTGGTTTTCCCGAAAAGCCTCGTATCAATAGAGATGTATTCCTTACTTATAAACCCATGATCATTTCCTTAATTAGCCAATGTAGAACTGCCTCCCAACAATTCTCAACACGACTGATAGGACAAATGTGAGTTTTAACCGTCCAAAGATAGGTTCTACAAGGCCTAAGTCCAATATGCCATATTTTGAGTTTGTGAGGAATAATTTTCAAAGTCCTGTTTCAAAACAGACTCCTAGTCATCTTAAGTATAAAACTAGGTAACTTTAAATGAACCACTTTAAATTTGTCATTTTTTACTTGGTCACCACAAGCCTCCAATCTTGATCATTACAATACATTATGAAAAAAGAGGCTGGAAGGAGGAAGAGAGTGGCATCGCTGTCGCACAAATGGTGGGTTTGGGGTCCTCTGTAGAGCAGTAGGGGCCATAACCATTAACCACACTGGTCGCTCTCGAAGAGTACACGCATTGGCTCCCACCACCGACATCTCCCTTTGTCCACATCCCAATATTACTTCTCCTCCTTTCTTATTCCCATTACTTTTCTTATAGGCTCTGAGTTTTTCCCAATAATCATGTGGGAATTCGGTCAATCCGATTCTATATGAATTTGACT

Coding sequence (CDS)

ATGGACTGGAGATCTTTATCGGAGTGGATTTCGTACAATGGCGGCCTTGGCAATCTACAGGTTGTATTTCAACGTTCCCGCTATCAAGGAGTTCAATGTTTGAGTCAATTACTTGAAGGTGGGGATTTGAGAGAAAAAGAGCTAAGGGAAGAAACTTATTCTCATAGGCTTATTACTATAGTTCATGACCACATAAGCGCTTCCGATCAAATTAAACACCTACAATCAAGTTCTACAAAAGGTTCTGCAGATGAGGTGGAGAGGATGGAGATGACTAGTTTACAGAGCTTGGAGAACGATCAAATAGCTACCTTTATTTGGAATTTGGAACCATGTATTCTTCAAAAGTTCCTTCTCACCACGGCGGTGATTTCTTTTGACTTCCCCATTACATTTACAAGTTCATTTGATGATCAATTTGCTGCGACGGATGCAATTCTATACAGGAAAGAGTCTTTTGCTCGTCAGGTCATGGGGAAGTCCTTTAAAGAAATTGGTCCTGCAGATTCTGGAGCATATCGATGCTATCCATTTTCTAAGCTTTTCCTCGATTGGCATGCTGAAGAATATGTTGCATCAATGATTGATATGATTATCTGA

Protein sequence

MDWRSLSEWISYNGGLGNLQVVFQRSRYQGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFTSSFDDQFAATDAILYRKESFARQVMGKSFKEIGPADSGAYRCYPFSKLFLDWHAEEYVASMIDMII
Homology
[Close]
BLAST of CmoCh17G011840 vs. ExPASy TrEMBL
Match: A0A6J1GSC3 (uncharacterized protein LOC111456538 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456538 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.6e-61
Identity = 132/164 (80.49%), Postives = 132/164 (80.49%), Query Frame = 0 

Query: 1   MDWRSLSEWISYNGGLGNLQVVFQRSRY-------------------------------Q 60
           MDWRSLSEWISYNGGLGNLQVVFQRSR                                Q
Sbjct: 37  MDWRSLSEWISYNGGLGNLQVVFQRSRCQNEVLHVPCSLADMNETKNHEHVVPSIRRLDQ 96

Query: 61  GVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERM 120
           GVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERM
Sbjct: 97  GVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERM 156

Query: 121 EMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT 134
           EMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
Sbjct: 157 EMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT 200

[Close]
BLAST of CmoCh17G011840 vs. ExPASy TrEMBL
Match: A0A6J1GQB4 (uncharacterized protein LOC111456538 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456538 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.6e-61
Identity = 132/164 (80.49%), Postives = 132/164 (80.49%), Query Frame = 0 

Query: 1   MDWRSLSEWISYNGGLGNLQVVFQRSRY-------------------------------Q 60
           MDWRSLSEWISYNGGLGNLQVVFQRSR                                Q
Sbjct: 1   MDWRSLSEWISYNGGLGNLQVVFQRSRCQNEVLHVPCSLADMNETKNHEHVVPSIRRLDQ 60

Query: 61  GVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERM 120
           GVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERM
Sbjct: 61  GVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERM 120

Query: 121 EMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT 134
           EMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
Sbjct: 121 EMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT 164

[Close]
BLAST of CmoCh17G011840 vs. ExPASy TrEMBL
Match: A0A6J1GRU8 (uncharacterized protein LOC111456538 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456538 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.4e-49
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 29  QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVER 88
           QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVER
Sbjct: 65  QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVER 124

Query: 89  MEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT 134
           MEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
Sbjct: 125 MEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT 169

[Close]
BLAST of CmoCh17G011840 vs. ExPASy TrEMBL
Match: A0A1S3BR94 (uncharacterized protein LOC103492647 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492647 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 9.1e-33
Identity = 100/205 (48.78%), Postives = 113/205 (55.12%), Query Frame = 0 

Query: 29  QGVQCLSQLLEGGDLREKELREETYSHR-----------LITIVHDHISASDQIKHLQSS 88
           QGVQCLSQ  EGGDL+EKELREET+SH            L+T+VHDH+S SDQ   LQSS
Sbjct: 347 QGVQCLSQAFEGGDLKEKELREETFSHELELCSARALHGLMTLVHDHVSVSDQTGALQSS 406

Query: 89  STKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTA--------------- 148
           ST GSAD  E M  TSL SLENDQ+A  IWNLEPC+LQK LLT A               
Sbjct: 407 STNGSADGEESMNFTSLNSLENDQVAISIWNLEPCVLQKVLLTMANNFPRTLEALILHLL 466

Query: 149 --------VISFD-------------FPITFTSSFDDQFAATDAILYRKESFARQVMGKS 186
                      FD             F   F SSFDDQFA  DAIL RKESFARQ +  S
Sbjct: 467 SPIGAEVLTRKFDQMDQRNTAEDQKRFYEVFYSSFDDQFAVMDAILNRKESFARQNIVLS 526

[Close]
BLAST of CmoCh17G011840 vs. ExPASy TrEMBL
Match: A0A1S3BR69 (uncharacterized protein LOC103492647 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492647 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 9.1e-33
Identity = 100/205 (48.78%), Postives = 113/205 (55.12%), Query Frame = 0 

Query: 29  QGVQCLSQLLEGGDLREKELREETYSHR-----------LITIVHDHISASDQIKHLQSS 88
           QGVQCLSQ  EGGDL+EKELREET+SH            L+T+VHDH+S SDQ   LQSS
Sbjct: 347 QGVQCLSQAFEGGDLKEKELREETFSHELELCSARALHGLMTLVHDHVSVSDQTGALQSS 406

Query: 89  STKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTA--------------- 148
           ST GSAD  E M  TSL SLENDQ+A  IWNLEPC+LQK LLT A               
Sbjct: 407 STNGSADGEESMNFTSLNSLENDQVAISIWNLEPCVLQKVLLTMANNFPRTLEALILHLL 466

Query: 149 --------VISFD-------------FPITFTSSFDDQFAATDAILYRKESFARQVMGKS 186
                      FD             F   F SSFDDQFA  DAIL RKESFARQ +  S
Sbjct: 467 SPIGAEVLTRKFDQMDQRNTAEDQKRFYEVFYSSFDDQFAVMDAILNRKESFARQNIVLS 526

[Close]
BLAST of CmoCh17G011840 vs. NCBI nr
Match: KAG7014469.1 (hypothetical protein SDJN02_24647 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.8 bits (678), Expect = 3.1e-67
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0 

Query: 1   MDWRSLSEWISYNGGLGNLQVVFQRSRYQGVQCLSQLLEGGDLREKELREETYSHRLITI 60
           MDWRSLSEWISYNGGLGNLQVVFQRSRYQGVQCLSQLLEGGDLREKELREETYSHRLITI
Sbjct: 37  MDWRSLSEWISYNGGLGNLQVVFQRSRYQGVQCLSQLLEGGDLREKELREETYSHRLITI 96

Query: 61  VHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLT 120
           VHDHIS+SDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLT
Sbjct: 97  VHDHISSSDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLT 156

Query: 121 TAVISFDFPITFTS 135
           TAVISFDFPITFTS
Sbjct: 157 TAVISFDFPITFTS 170

[Close]
BLAST of CmoCh17G011840 vs. NCBI nr
Match: XP_022954216.1 (uncharacterized protein LOC111456538 isoform X3 [Cucurbita moschata])

HSP 1 Score: 245.7 bits (626), Expect = 3.3e-61
Identity = 132/164 (80.49%), Postives = 132/164 (80.49%), Query Frame = 0 

Query: 1   MDWRSLSEWISYNGGLGNLQVVFQRSRY-------------------------------Q 60
           MDWRSLSEWISYNGGLGNLQVVFQRSR                                Q
Sbjct: 1   MDWRSLSEWISYNGGLGNLQVVFQRSRCQNEVLHVPCSLADMNETKNHEHVVPSIRRLDQ 60

Query: 61  GVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERM 120
           GVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERM
Sbjct: 61  GVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERM 120

Query: 121 EMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT 134
           EMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
Sbjct: 121 EMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT 164

[Close]
BLAST of CmoCh17G011840 vs. NCBI nr
Match: XP_022954214.1 (uncharacterized protein LOC111456538 isoform X1 [Cucurbita moschata])

HSP 1 Score: 245.7 bits (626), Expect = 3.3e-61
Identity = 132/164 (80.49%), Postives = 132/164 (80.49%), Query Frame = 0 

Query: 1   MDWRSLSEWISYNGGLGNLQVVFQRSRY-------------------------------Q 60
           MDWRSLSEWISYNGGLGNLQVVFQRSR                                Q
Sbjct: 37  MDWRSLSEWISYNGGLGNLQVVFQRSRCQNEVLHVPCSLADMNETKNHEHVVPSIRRLDQ 96

Query: 61  GVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERM 120
           GVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERM
Sbjct: 97  GVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERM 156

Query: 121 EMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT 134
           EMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
Sbjct: 157 EMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT 200

[Close]
BLAST of CmoCh17G011840 vs. NCBI nr
Match: XP_022954215.1 (uncharacterized protein LOC111456538 isoform X2 [Cucurbita moschata])

HSP 1 Score: 205.3 bits (521), Expect = 4.9e-49
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 29  QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVER 88
           QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVER
Sbjct: 65  QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVER 124

Query: 89  MEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT 134
           MEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
Sbjct: 125 MEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT 169

[Close]
BLAST of CmoCh17G011840 vs. NCBI nr
Match: XP_008451321.1 (PREDICTED: uncharacterized protein LOC103492647 isoform X3 [Cucumis melo] >XP_016901082.1 PREDICTED: uncharacterized protein LOC103492647 isoform X3 [Cucumis melo])

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-32
Identity = 100/205 (48.78%), Postives = 113/205 (55.12%), Query Frame = 0 

Query: 29  QGVQCLSQLLEGGDLREKELREETYSHR-----------LITIVHDHISASDQIKHLQSS 88
           QGVQCLSQ  EGGDL+EKELREET+SH            L+T+VHDH+S SDQ   LQSS
Sbjct: 347 QGVQCLSQAFEGGDLKEKELREETFSHELELCSARALHGLMTLVHDHVSVSDQTGALQSS 406

Query: 89  STKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTA--------------- 148
           ST GSAD  E M  TSL SLENDQ+A  IWNLEPC+LQK LLT A               
Sbjct: 407 STNGSADGEESMNFTSLNSLENDQVAISIWNLEPCVLQKVLLTMANNFPRTLEALILHLL 466

Query: 149 --------VISFD-------------FPITFTSSFDDQFAATDAILYRKESFARQVMGKS 186
                      FD             F   F SSFDDQFA  DAIL RKESFARQ +  S
Sbjct: 467 SPIGAEVLTRKFDQMDQRNTAEDQKRFYEVFYSSFDDQFAVMDAILNRKESFARQNIVLS 526

[Close]
BLAST of CmoCh17G011840 vs. TAIR 10
Match: AT5G19840.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 8.4e-07
Identity = 51/180 (28.33%), Postives = 72/180 (40.00%), Query Frame = 0 

Query: 34  LSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGS-ADEVERMEMT 93
           LS L E   L + +       H LI++VHDH++A D  K LQ +S   S   E  +  + 
Sbjct: 346 LSTLHEKASLHDLDPSASQALHDLISLVHDHVNAVDTSKGLQHTSPSCSEGGEKSKFLVN 405

Query: 94  SLQSLENDQIATFIWNLEPCILQKFLLTTA-----------------------------V 153
           ++  LE+D++A  +WNLE   L+  LL  A                             +
Sbjct: 406 AMSCLEDDRVAHLLWNLEASRLRDVLLAMALELSYLKLLVKMEIFVLVLHKIFETLEALI 465

Query: 154 ISFDFPIT--------------------------FTSSFDDQFAATDAILYRKESFARQV 158
           +    PI                           F S+FDD+ AA D IL RKE+FA QV
Sbjct: 466 LHMLSPIAAEVLTQKFDEIDQQTGEEDRTQFFREFYSAFDDEAAAMDIILSRKEAFAFQV 525

The following BLAST results are available for this feature:
BLAST of CmoCh17G011840 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh17G011840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GSC31.6e-6180.49uncharacterized protein LOC111456538 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1GQB41.6e-6180.49uncharacterized protein LOC111456538 isoform X3 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1GRU82.4e-49100.00uncharacterized protein LOC111456538 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A1S3BR949.1e-3348.78uncharacterized protein LOC103492647 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BR699.1e-3348.78uncharacterized protein LOC103492647 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of CmoCh17G011840 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7014469.13.1e-6799.25hypothetical protein SDJN02_24647 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022954216.13.3e-6180.49uncharacterized protein LOC111456538 isoform X3 [Cucurbita moschata][more]
XP_022954214.13.3e-6180.49uncharacterized protein LOC111456538 isoform X1 [Cucurbita moschata][more]
XP_022954215.14.9e-49100.00uncharacterized protein LOC111456538 isoform X2 [Cucurbita moschata][more]
XP_008451321.11.9e-3248.78PREDICTED: uncharacterized protein LOC103492647 isoform X3 [Cucumis melo] >XP_01... [more]
BLAST of CmoCh17G011840 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G19840.28.4e-0728.332-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G011840.1CmoCh17G011840.1mRNA