CmoCh17G011380 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh17G011380
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
LocationCmo_Chr17: 9263144 .. 9264343 (+)
RNA-Seq ExpressionCmoCh17G011380
SyntenyCmoCh17G011380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTCTACGCCCTATGCGCTCTTCTCGTATCTGCGCAGCTTCAAATCTGCTCAGTCTTGTTTCGTAAGGCGAAAATTCGTCTTACAGATCAGATCCGTTTCGAGTTTGAAGGTTATTTGGCGCAAGGATTCCAGATTGGACGAAGCCATTGAGAACGACAAGCGGTACAAGCTATGTGCGCGGGTTGTGAGGGAAGTTCTCAACGAGCCTGGACAGGTCATTCCGCTTCGATATCTGGAGAAACGACGGCAGAGATTGCGTCTCAATGTGTCAATCAAGACGTTTATGAGTTTTAATCCGGGTTTGTTGAATACTTACTATGATAGAATCAAACCTAAATCTGAACCCGTCCTGTTCTTACGCCCGAGCGACCGGCTTAGGGGGTTTCTCGAAGAGGAGAAGAGGATTACGATGGAAAACGAAGCGTTGATCGTTTCGAAATTGTGCAAGTTATTGATGATATCGAAGGATAAAGTGCTCAGTGTCGATAAATTAGTGCAGGTTAAGCGGGAATTCGGGTTTCCAAATGATTTTTTGGTCAATTTGGTGCCGAAGTACCCTGAATATTTTCAGATAATTGGTAGTCCTGGAGACGAAAAATCGTTTCTTCAATTGGTTTCTCGAAACCCTGACTTCGCGAAATCAGTGATTGAGAGAAGAGCCGAGGACGAATCCATATCGACAGGCATTGATATTCGACCCAATTTCAACTACAATCTTCCTCCTGGATTCTTCTTAAGAAAGGAAATGAGAGAATGGGTTAGAGATTGGTTAGAACTAGATTACATATCGCCGTACGAGGACGTGTCCCATTTGGCCCAAGCTTCGCCGGAGATGGAGAAGAGAACAGTAGGAGTTTTTCACGAGTTGCTATCACTTTCATTGTTCAAGAGGATTCCAGTGCCGATATTGGGAAAATTTAGTGATGAGTACCGGTTTTCAAATGCATTTTCCAGTGTGTTCACAAGGCATTCTGGGATATTTTATTTGTCTTTGAAAGGTGGGATTGAGACTGCGATGCTTCGAGAGGCATATAAGGGTAGCCAGTTGATTGATTGTGACCCATTGCTTGAAATAAAAGATAAGTTCGTGGAGTTGTTGGAAGAAGGATGGAGGGAGAGAGCTGAGCAGCGAAGGCAGCAGGCTAAACAAGTGAGGAACGACATGGAATTCATGGCTGCAAGAGCTGACGCTTAA

mRNA sequence

ATGCTCTCTACGCCCTATGCGCTCTTCTCGTATCTGCGCAGCTTCAAATCTGCTCAGTCTTGTTTCGTAAGGCGAAAATTCGTCTTACAGATCAGATCCGTTTCGAGTTTGAAGGTTATTTGGCGCAAGGATTCCAGATTGGACGAAGCCATTGAGAACGACAAGCGGTACAAGCTATGTGCGCGGGTTGTGAGGGAAGTTCTCAACGAGCCTGGACAGGTCATTCCGCTTCGATATCTGGAGAAACGACGGCAGAGATTGCGTCTCAATGTGTCAATCAAGACGTTTATGAGTTTTAATCCGGGTTTGTTGAATACTTACTATGATAGAATCAAACCTAAATCTGAACCCGTCCTGTTCTTACGCCCGAGCGACCGGCTTAGGGGGTTTCTCGAAGAGGAGAAGAGGATTACGATGGAAAACGAAGCGTTGATCGTTTCGAAATTGTGCAAGTTATTGATGATATCGAAGGATAAAGTGCTCAGTGTCGATAAATTAGTGCAGGTTAAGCGGGAATTCGGGTTTCCAAATGATTTTTTGGTCAATTTGGTGCCGAAGTACCCTGAATATTTTCAGATAATTGGTAGTCCTGGAGACGAAAAATCGTTTCTTCAATTGGTTTCTCGAAACCCTGACTTCGCGAAATCAGTGATTGAGAGAAGAGCCGAGGACGAATCCATATCGACAGGCATTGATATTCGACCCAATTTCAACTACAATCTTCCTCCTGGATTCTTCTTAAGAAAGGAAATGAGAGAATGGGTTAGAGATTGGTTAGAACTAGATTACATATCGCCGTACGAGGACGTGTCCCATTTGGCCCAAGCTTCGCCGGAGATGGAGAAGAGAACAGTAGGAGTTTTTCACGAGTTGCTATCACTTTCATTGTTCAAGAGGATTCCAGTGCCGATATTGGGAAAATTTAGTGATGAGTACCGGTTTTCAAATGCATTTTCCAGTGTGTTCACAAGGCATTCTGGGATATTTTATTTGTCTTTGAAAGGTGGGATTGAGACTGCGATGCTTCGAGAGGCATATAAGGGTAGCCAGTTGATTGATTGTGACCCATTGCTTGAAATAAAAGATAAGTTCGTGGAGTTGTTGGAAGAAGGATGGAGGGAGAGAGCTGAGCAGCGAAGGCAGCAGGCTAAACAAGTGAGGAACGACATGGAATTCATGGCTGCAAGAGCTGACGCTTAA

Coding sequence (CDS)

ATGCTCTCTACGCCCTATGCGCTCTTCTCGTATCTGCGCAGCTTCAAATCTGCTCAGTCTTGTTTCGTAAGGCGAAAATTCGTCTTACAGATCAGATCCGTTTCGAGTTTGAAGGTTATTTGGCGCAAGGATTCCAGATTGGACGAAGCCATTGAGAACGACAAGCGGTACAAGCTATGTGCGCGGGTTGTGAGGGAAGTTCTCAACGAGCCTGGACAGGTCATTCCGCTTCGATATCTGGAGAAACGACGGCAGAGATTGCGTCTCAATGTGTCAATCAAGACGTTTATGAGTTTTAATCCGGGTTTGTTGAATACTTACTATGATAGAATCAAACCTAAATCTGAACCCGTCCTGTTCTTACGCCCGAGCGACCGGCTTAGGGGGTTTCTCGAAGAGGAGAAGAGGATTACGATGGAAAACGAAGCGTTGATCGTTTCGAAATTGTGCAAGTTATTGATGATATCGAAGGATAAAGTGCTCAGTGTCGATAAATTAGTGCAGGTTAAGCGGGAATTCGGGTTTCCAAATGATTTTTTGGTCAATTTGGTGCCGAAGTACCCTGAATATTTTCAGATAATTGGTAGTCCTGGAGACGAAAAATCGTTTCTTCAATTGGTTTCTCGAAACCCTGACTTCGCGAAATCAGTGATTGAGAGAAGAGCCGAGGACGAATCCATATCGACAGGCATTGATATTCGACCCAATTTCAACTACAATCTTCCTCCTGGATTCTTCTTAAGAAAGGAAATGAGAGAATGGGTTAGAGATTGGTTAGAACTAGATTACATATCGCCGTACGAGGACGTGTCCCATTTGGCCCAAGCTTCGCCGGAGATGGAGAAGAGAACAGTAGGAGTTTTTCACGAGTTGCTATCACTTTCATTGTTCAAGAGGATTCCAGTGCCGATATTGGGAAAATTTAGTGATGAGTACCGGTTTTCAAATGCATTTTCCAGTGTGTTCACAAGGCATTCTGGGATATTTTATTTGTCTTTGAAAGGTGGGATTGAGACTGCGATGCTTCGAGAGGCATATAAGGGTAGCCAGTTGATTGATTGTGACCCATTGCTTGAAATAAAAGATAAGTTCGTGGAGTTGTTGGAAGAAGGATGGAGGGAGAGAGCTGAGCAGCGAAGGCAGCAGGCTAAACAAGTGAGGAACGACATGGAATTCATGGCTGCAAGAGCTGACGCTTAA

Protein sequence

MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLFLRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFLVNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYNLPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRIPVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEIKDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA
Homology
BLAST of CmoCh17G011380 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-44
Identity = 118/337 (35.01%), Postives = 185/337 (54.90%), Query Frame = 0

Query: 42  RKDSRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNP 101
           RK+   D  ++ DK+ KL   + + ++++P +++ LR L K R+ L L    + F++   
Sbjct: 79  RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLK-KRRRFIA--- 138

Query: 102 GLLNTY---YDRIKPKSEPVLFLRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKD 161
            LL  Y   ++ ++  +  + F   S+  R +L +E RI  E E ++V KL KL+M+S D
Sbjct: 139 -LLRKYPGVFEIVEEGAYSLRFKMTSEAERLYL-DEMRIRNELEDVLVVKLRKLVMMSID 198

Query: 162 KVLSVDKLVQVKREFGFPNDFLVNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVI 221
           K + ++K+  +K + G P +F   +  +YP+YF+++ +P      L+L   +P+ A S  
Sbjct: 199 KRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP--RGPALELTHWDPELAVSAA 258

Query: 222 E------RRAEDESISTGIDIRPNFN-YNLPPGFFLRKEMREWVRDWLELDYISPYEDVS 281
           E      R  E E  +  ID  P FN   LP G  L K     +  + ++ YISPY+D S
Sbjct: 259 ELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFS 318

Query: 282 HLAQASPEMEKRTVGVFHELLSLSLFKRIPVPILGKFSDEYRFSNAFSSVFTRHSGIFYL 341
           HL   + E EK   GV HELLSL+  KR  V  L  F +E+RFS     +  RH  +FY+
Sbjct: 319 HLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYV 378

Query: 342 SLKGGIETAMLREAYKGSQLIDCDPLLEIKDKFVELL 369
           SLKG  ++  LREAY+ S+LID DPL  +K+K   L+
Sbjct: 379 SLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALV 407

BLAST of CmoCh17G011380 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.4e-42
Identity = 118/348 (33.91%), Postives = 180/348 (51.72%), Query Frame = 0

Query: 34  VSSLKVIWRKDSRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRL------ 93
           V+   V  RK+   D  I+ DK+ KL  ++   +++ P +V+ LR L + R+ L      
Sbjct: 56  VAQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKR 115

Query: 94  RLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLFLRPSDRLRGFLEEEKRITMENEALIVS 153
           RL   +K F    PG+     + +       L  R +        +E  +  E+E L V+
Sbjct: 116 RLIALLKRF----PGVFEVVEEGVYS-----LRFRLTPAAERLYLDELHLKNESEGLAVT 175

Query: 154 KLCKLLMISKDKVLSVDKLVQVKREFGFPNDFLVNLVPKYPEYFQIIGSPGDEKSFLQLV 213
           KL KLLM+S+DK + ++K+  +K + G P +F   +  +YP+YF+++    D    L+L 
Sbjct: 176 KLRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQM--DRGPGLELT 235

Query: 214 SRNPDFAKSVIE------RRAEDESISTGIDIRPNFN-YNLPPGFFLRKEMREWVRDWLE 273
             +P+ A S  E      R  E++  +  ID    FN   LP G  L +     V  + E
Sbjct: 236 HWDPELAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKE 295

Query: 274 LDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRIPVPILGKFSDEYRFSNAFSS 333
           + YISPY D SHL   S E EK   GV HE+LSL+L KR  V  L  F +E+RFS +   
Sbjct: 296 MPYISPYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRG 355

Query: 334 VFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEIKDKFVELL 369
           +  RH  +FY+SLKG  ++  LREAYK SQL++   L+ +K+K   L+
Sbjct: 356 MLIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALV 392

BLAST of CmoCh17G011380 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.6e-41
Identity = 113/344 (32.85%), Postives = 179/344 (52.03%), Query Frame = 0

Query: 34  VSSLKVIWRKDSRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSI 93
           V+   V  RK++  D  I+ DK+ KL  ++   ++ +P +V+ LR L + R+ L L    
Sbjct: 50  VAQAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKR 109

Query: 94  KTFMSFN--PGLLNTYYDRIKPKSEPVLFLRPSDRLRGFLEEEKRITMENEALIVSKLCK 153
           +        PG+ +   + +       L  R +        +E R+  E+E L V+KL K
Sbjct: 110 RLIALLRRFPGVFDVVEEGVYS-----LRFRLTPAAERLYLDELRLRNESEGLAVAKLRK 169

Query: 154 LLMISKDKVLSVDKLVQVKREFGFPNDFLVNLVPKYPEYFQIIGSPGDEKSFLQLVSRNP 213
           LLM+S++K + ++K+  +K + G P +F   +  +YP+YF+++    D    L+L   +P
Sbjct: 170 LLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRM--DRGPALELTHWDP 229

Query: 214 DFAKSVIE------RRAEDESISTGIDIRPNFN-YNLPPGFFLRKEMREWVRDWLELDYI 273
           + A S  E      R  E E  +  ID    FN   LP G  L +     +  + E+ YI
Sbjct: 230 ELAVSAAELAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYI 289

Query: 274 SPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRIPVPILGKFSDEYRFSNAFSSVFTR 333
           SPY D SHL   S E EK   GV HE+LSL++ KR  V  L  F +E+RFS +   +  R
Sbjct: 290 SPYADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIR 349

Query: 334 HSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEIKDKFVELL 369
           H  +FY+S KG  ++  LREAYK SQL++ + L+ +K+K   L+
Sbjct: 350 HPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALV 386

BLAST of CmoCh17G011380 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.3e-34
Identity = 92/340 (27.06%), Postives = 166/340 (48.82%), Query Frame = 0

Query: 43  KDSRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPG 102
           +D   D  +E +K+ +   +    +L++P   I +  L+   +RL L      F    PG
Sbjct: 48  RDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLG-----FKQHEPG 107

Query: 103 LLNTYYDRI----KPKSEPVLFLRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKD 162
                +  +    +   + +L+ R + +    +  E    ++     V++L KL+M+S  
Sbjct: 108 AFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNT 167

Query: 163 KVLSVDKLVQVKREFGFPNDFLVNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVI 222
             + ++ +   + EFG P DF  +++ K+P++F++I        ++++V ++P+ +   I
Sbjct: 168 GRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAI 227

Query: 223 ERRAEDESISTGI---DIRPNFNYNLPPGFFLRKEMREWVRDWLELDYISPYEDVS---- 282
           ER  E E  + GI   D+R +F  N PPGF + K  R  V  W  L Y SPYED+S    
Sbjct: 228 ERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDL 287

Query: 283 HLAQASPEMEKRTVGVFHELLSLSLFKRIPVPILGKFSDEYRFSNAFSSVFTRHSGIFYL 342
              +A   +EKR+V   HELLSL++ K+I +  +  F +             +H GIFY+
Sbjct: 288 RSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYI 347

Query: 343 SLKGG---IETAMLREAYKGSQLIDCDPLLEIKDKFVELL 369
           S +G    + T  LRE YK  +L++ + +   + +  EL+
Sbjct: 348 STRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV 382

BLAST of CmoCh17G011380 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 7.4e-23
Identity = 85/343 (24.78%), Postives = 155/343 (45.19%), Query Frame = 0

Query: 30  QIRSVSSLKVIWRKDSRLD--EAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRL 89
           Q R+   + + W++D   D  E I    + K    +   ++ EP + IP+  + K+ ++ 
Sbjct: 20  QKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQF 79

Query: 90  RLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLFLRPSDRLRGFLEEEKRITMENEA-LIV 149
            ++  I  F+   P +   +   + P+     F    +     L+ ++R+  +  A  + 
Sbjct: 80  DVSTKIAHFLRKFPSIFEEF---VGPEYNLPWFRLTPEATE--LDRQERVVYQTSADDLR 139

Query: 150 SKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFLVNLVPKYPEYFQIIGSPGDEKSFLQL 209
            +L KL+++SKD VL +  +  +K   G P+D+L          F+ +      K  L +
Sbjct: 140 DRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKG-LAV 199

Query: 210 VSRNPDFAKSVIERRAEDESISTGIDIRPNFNYNLPPGFFLRKEMREWVRDWLELDYISP 269
                D   SV+++ A  +           F      G  LR ++ +W+ ++ +L Y+SP
Sbjct: 200 DYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVSP 259

Query: 270 YEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRIPVPILGKFSDEYRFSNAFSSVFTRHS 329
           Y+D S L  +S   EKR VG  HELL L +        L      +         F RH 
Sbjct: 260 YDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHP 319

Query: 330 GIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEIKDKFVELLE 370
            IFYLS+K    TA+LRE Y+    ++  P+L ++ K+++L++
Sbjct: 320 QIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMK 356

BLAST of CmoCh17G011380 vs. ExPASy TrEMBL
Match: A0A6J1GN70 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456044 PE=4 SV=1)

HSP 1 Score: 788.1 bits (2034), Expect = 1.7e-224
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0

Query: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60
           MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120

Query: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
           LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
           VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
           PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA 400
           KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA 399

BLAST of CmoCh17G011380 vs. ExPASy TrEMBL
Match: A0A6J1JZH3 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488826 PE=4 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 8.3e-219
Identity = 389/399 (97.49%), Postives = 394/399 (98.75%), Query Frame = 0

Query: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60
           MLSTPYALFSYLRSFKSAQS FVRRKF LQIR+VSSLKVIWRKDSRLDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSSFVRRKFFLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTY DRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYCDRIKPKSEPVLF 120

Query: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
           LRPSDRLRGFLEEEKRITMENEAL+VSKLCKLLMISKDK+LSVDKLV VKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALLVSKLCKLLMISKDKLLSVDKLVHVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
           VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNP+FAKSVIERRAEDESISTGI IRPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPNFAKSVIERRAEDESISTGIQIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVG+FHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGIFHELLSLSLFKRI 300

Query: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
           PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA 400
           KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA 399

BLAST of CmoCh17G011380 vs. ExPASy TrEMBL
Match: A0A0A0K559 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G392430 PE=4 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 3.2e-194
Identity = 340/397 (85.64%), Postives = 366/397 (92.19%), Query Frame = 0

Query: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60
           M STP +L SYLR  KS   CF+ ++ ++Q R +SSLKV+WRKD RLDEAIENDKRYKLC
Sbjct: 1   MFSTPNSLISYLRGIKSHCPCFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120
           ARVV+EVLNEPGQVIPLRYLEKRR+RLRLNVS+K F+ FNPGL +TYYDRIKPKSEPVLF
Sbjct: 61  ARVVKEVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLFDTYYDRIKPKSEPVLF 120

Query: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
           LR SDRLRGFLEEEKRI MENE LIVSKLCKLLM+SKDK+LSVDKLV VKR+FGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLVHVKRDFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
           VNLVPKYPEYFQI+G PG+ KSFLQLVSRNPDFAKSVIERRAEDESISTGI +RPNF+Y 
Sbjct: 181 VNLVPKYPEYFQIVGCPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRMRPNFDYK 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
           PVPILGKF  EYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAY+G QLIDCDPLLEI
Sbjct: 301 PVPILGKFGGEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYEGGQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARA 398
           K+KFVELLE+GWRERAEQRRQQA ++R DMEFM ARA
Sbjct: 361 KNKFVELLEQGWRERAEQRRQQANELRKDMEFMCARA 397

BLAST of CmoCh17G011380 vs. ExPASy TrEMBL
Match: A0A1S3BS57 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492691 PE=4 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 8.6e-192
Identity = 336/397 (84.63%), Postives = 365/397 (91.94%), Query Frame = 0

Query: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60
           M STP++L SYLR  KS    F+ ++ ++Q R +SSLKV+WRKD RLDEAIENDKRYKLC
Sbjct: 1   MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRR+RLRLNVS+K F+ FNPGLL+TYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
           LR SDRLRGFLEEEKRI MENE LIVSKLCKLLM+SKDK+LSVDKL+ VKR+FGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLV+RNPDFAKSVIERRAEDES STGI +RPNF+Y 
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYEDVS+L Q+SPEMEKRTVGVFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300

Query: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
           PVPILGKF DEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAY+G QLIDCDPLLEI
Sbjct: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARA 398
           K+KFVELLE+GWRERAEQRR+QA + R DMEFM ARA
Sbjct: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARA 397

BLAST of CmoCh17G011380 vs. ExPASy TrEMBL
Match: A0A5D3DBW6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00130 PE=4 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 1.2e-190
Identity = 334/397 (84.13%), Postives = 364/397 (91.69%), Query Frame = 0

Query: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60
           M STP++L SYLR  KS    F+ ++ ++Q R +SSLKV+WRKD RLDEAIENDKRYKLC
Sbjct: 1   MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRR+RLRLNVS+K F+ FNPGLL+TYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
           LR SDRLR FLEEEKRI MENE LIVSKLCKLLM+SKDK+LSVDKL+ VKR+FGFPNDFL
Sbjct: 121 LRASDRLRRFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLV+RNPDFAKSVIERRAEDES STGI +RPNF+Y 
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDY+SPYEDVS+L Q+SPEMEKRTVGVFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYLSPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300

Query: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
           PVPILGKF DEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAY+G QLIDCDPLLEI
Sbjct: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARA 398
           K+KFVELLE+GWRERAEQRR+QA + R DMEFM ARA
Sbjct: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARA 397

BLAST of CmoCh17G011380 vs. NCBI nr
Match: XP_022953521.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953522.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953524.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953525.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953526.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata])

HSP 1 Score: 788.1 bits (2034), Expect = 3.5e-224
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0

Query: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60
           MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120

Query: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
           LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
           VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
           PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA 400
           KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA 399

BLAST of CmoCh17G011380 vs. NCBI nr
Match: KAG7014426.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 782.7 bits (2020), Expect = 1.5e-222
Identity = 396/399 (99.25%), Postives = 398/399 (99.75%), Query Frame = 0

Query: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60
           MLS PYALFSYLRSFKSAQSCFVRRKFVLQIR+VSSLKVIWRKDSRLDEAIENDKRYKLC
Sbjct: 1   MLSKPYALFSYLRSFKSAQSCFVRRKFVLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLL+TYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
           LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
           VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
           PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA 400
           KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA 399

BLAST of CmoCh17G011380 vs. NCBI nr
Match: KAG6575893.1 (Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 781.2 bits (2016), Expect = 4.3e-222
Identity = 395/399 (99.00%), Postives = 397/399 (99.50%), Query Frame = 0

Query: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60
           MLS PYALFSYLRSFKSAQSCFVRRKFVLQIR+VSSLKVIWRKDSRLDEAIENDKRYKLC
Sbjct: 1   MLSKPYALFSYLRSFKSAQSCFVRRKFVLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLL+TYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
           LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
           VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
           PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPL EI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLFEI 360

Query: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA 400
           KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA 399

BLAST of CmoCh17G011380 vs. NCBI nr
Match: XP_022992526.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992527.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992528.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992529.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992530.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992531.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima])

HSP 1 Score: 769.2 bits (1985), Expect = 1.7e-218
Identity = 389/399 (97.49%), Postives = 394/399 (98.75%), Query Frame = 0

Query: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60
           MLSTPYALFSYLRSFKSAQS FVRRKF LQIR+VSSLKVIWRKDSRLDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSSFVRRKFFLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTY DRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYCDRIKPKSEPVLF 120

Query: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
           LRPSDRLRGFLEEEKRITMENEAL+VSKLCKLLMISKDK+LSVDKLV VKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALLVSKLCKLLMISKDKLLSVDKLVHVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
           VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNP+FAKSVIERRAEDESISTGI IRPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPNFAKSVIERRAEDESISTGIQIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVG+FHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGIFHELLSLSLFKRI 300

Query: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
           PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA 400
           KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARADA 399

BLAST of CmoCh17G011380 vs. NCBI nr
Match: XP_038899043.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 703.0 bits (1813), Expect = 1.5e-198
Identity = 355/396 (89.65%), Postives = 370/396 (93.43%), Query Frame = 0

Query: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60
           MLSTP+ LFS LRSFKSA    + ++ V QIR +SSLKVIWRKD RLDEAIENDKRYKLC
Sbjct: 1   MLSTPHTLFSCLRSFKSAHPSLLSQEIVFQIRHISSLKVIWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVS+K FMS NPGL  TYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSVKMFMSCNPGLFETYYDRIKPKSEPVLF 120

Query: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
           LR SDRLRGFLEEEKRITMENE LIVSKLCKLLMISKDK+LSVDKLV VKREFGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKDKMLSVDKLVHVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLVSRNPDFAKSVIERRAEDESISTGI IRPNFNY 
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFNYK 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
           PVP LGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIE AMLREAY+GSQLID DPLLEI
Sbjct: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIENAMLREAYEGSQLIDRDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAAR 397
           KDKFVELLE+GWRERAEQRRQ+AKQ+R DM+FMAAR
Sbjct: 361 KDKFVELLEQGWRERAEQRRQRAKQLRKDMDFMAAR 396

BLAST of CmoCh17G011380 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 550.4 bits (1417), Expect = 1.2e-156
Identity = 273/387 (70.54%), Postives = 318/387 (82.17%), Query Frame = 0

Query: 9   FSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLCARVVREVL 68
           +  ++S K A+         +QIR +SSLKV+W+KD+RLDEAIE DKRYKLCARVV+EVL
Sbjct: 10  YEIIKSLKHAK----EHSLGIQIRWISSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVL 69

Query: 69  NEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLFLRPSDRLR 128
           NEPGQVIPLRYLEKRR+RLRL    K+F+  NP L   YYDRIKPKS+PV FLRP+ RLR
Sbjct: 70  NEPGQVIPLRYLEKRRERLRLTFKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLR 129

Query: 129 GFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFLVNLVPKYP 188
            FL+EE+RI  ENE L+VSKLC+LLM++KDKV+S DKLV VKR+FGFPNDFL+ LV KYP
Sbjct: 130 AFLDEEQRIYSENEPLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYP 189

Query: 189 EYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYNLPPGFFLR 248
            YF++ G P + KSFL+LVS NPDFAKS IE RAEDE++ TG+ IRPN+N  LP GFFLR
Sbjct: 190 NYFRLTGLPEEGKSFLELVSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLR 249

Query: 249 KEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRIPVPILGKF 308
           KEMREW RDWLE DYISPYEDVSHL QAS EMEKRTVGV HELLSLSL KR+PVP LGKF
Sbjct: 250 KEMREWTRDWLEQDYISPYEDVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKF 309

Query: 309 SDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEIKDKFVELL 368
            DE+RFSNAFSSVFTRHSGIFYLSLKGGI+TA+LREAYK  +L+D DPLL IKDKF+ LL
Sbjct: 310 CDEFRFSNAFSSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLL 369

Query: 369 EEGWRERAEQRRQQAKQVRNDMEFMAA 396
           EEGW+ER ++ + Q +QV+ D E M A
Sbjct: 370 EEGWQERKDRLKLQREQVQKDREMMLA 392

BLAST of CmoCh17G011380 vs. TAIR 10
Match: AT2G31290.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 189.5 bits (480), Expect = 5.2e-48
Identity = 111/341 (32.55%), Postives = 190/341 (55.72%), Query Frame = 0

Query: 42  RKDSRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNP 101
           +KD  L+ A+  +KR+ + +R+   +L  P QV  +++L+K+ + L L      ++   P
Sbjct: 29  KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88

Query: 102 GLLNTYYDRIKPKSEPVLFLRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVL 161
              + Y +  +       + R +  +   +EEE+ +    E ++  +L KLLM+S ++ L
Sbjct: 89  CCFHVYLENDE------YYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRL 148

Query: 162 SVDKLVQVKREFGFPNDFLVNLVPKYPEYFQIIGSPGDEKSF-LQLVSRNPDFAKSVIER 221
           +V KL + KR FGFP+D+++ +VPKY + F+++   G + S  ++L+   P+ A S +E 
Sbjct: 149 NVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA 208

Query: 222 RAEDESISTGIDIRPNFNYNLPPGFFLRKEMREWVR--DWLELDYISPYEDVSHLAQASP 281
            A+           P+F+ +LP  +      + W R  ++    YISPYED   L + S 
Sbjct: 209 AAKK------CGSEPSFSCSLPSTW-----TKPWERFMEFNAFPYISPYEDHGDLVEGSK 268

Query: 282 EMEKRTVGVFHELLSLSLFKRIPVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIE 341
           E EKR+VG+ HELLSL+L+K++ +  L  F  E+      + +  +H GIFY+  K  + 
Sbjct: 269 ESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVH 328

Query: 342 TAMLREAYKGSQLIDCDPLLEIKDKFVELLEEGWRERAEQR 380
           T +LRE Y GS+LI  DPL+ +KDKF EL+++G  E   +R
Sbjct: 329 TVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRR 352

BLAST of CmoCh17G011380 vs. TAIR 10
Match: AT2G31290.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 189.5 bits (480), Expect = 5.2e-48
Identity = 111/341 (32.55%), Postives = 190/341 (55.72%), Query Frame = 0

Query: 42  RKDSRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNP 101
           +KD  L+ A+  +KR+ + +R+   +L  P QV  +++L+K+ + L L      ++   P
Sbjct: 29  KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88

Query: 102 GLLNTYYDRIKPKSEPVLFLRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVL 161
              + Y +  +       + R +  +   +EEE+ +    E ++  +L KLLM+S ++ L
Sbjct: 89  CCFHVYLENDE------YYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRL 148

Query: 162 SVDKLVQVKREFGFPNDFLVNLVPKYPEYFQIIGSPGDEKSF-LQLVSRNPDFAKSVIER 221
           +V KL + KR FGFP+D+++ +VPKY + F+++   G + S  ++L+   P+ A S +E 
Sbjct: 149 NVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA 208

Query: 222 RAEDESISTGIDIRPNFNYNLPPGFFLRKEMREWVR--DWLELDYISPYEDVSHLAQASP 281
            A+           P+F+ +LP  +      + W R  ++    YISPYED   L + S 
Sbjct: 209 AAKK------CGSEPSFSCSLPSTW-----TKPWERFMEFNAFPYISPYEDHGDLVEGSK 268

Query: 282 EMEKRTVGVFHELLSLSLFKRIPVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIE 341
           E EKR+VG+ HELLSL+L+K++ +  L  F  E+      + +  +H GIFY+  K  + 
Sbjct: 269 ESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVH 328

Query: 342 TAMLREAYKGSQLIDCDPLLEIKDKFVELLEEGWRERAEQR 380
           T +LRE Y GS+LI  DPL+ +KDKF EL+++G  E   +R
Sbjct: 329 TVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRR 352

BLAST of CmoCh17G011380 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 181.8 bits (460), Expect = 1.1e-45
Identity = 118/337 (35.01%), Postives = 185/337 (54.90%), Query Frame = 0

Query: 42  RKDSRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNP 101
           RK+   D  ++ DK+ KL   + + ++++P +++ LR L K R+ L L    + F++   
Sbjct: 79  RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLK-KRRRFIA--- 138

Query: 102 GLLNTY---YDRIKPKSEPVLFLRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKD 161
            LL  Y   ++ ++  +  + F   S+  R +L +E RI  E E ++V KL KL+M+S D
Sbjct: 139 -LLRKYPGVFEIVEEGAYSLRFKMTSEAERLYL-DEMRIRNELEDVLVVKLRKLVMMSID 198

Query: 162 KVLSVDKLVQVKREFGFPNDFLVNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVI 221
           K + ++K+  +K + G P +F   +  +YP+YF+++ +P      L+L   +P+ A S  
Sbjct: 199 KRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP--RGPALELTHWDPELAVSAA 258

Query: 222 E------RRAEDESISTGIDIRPNFN-YNLPPGFFLRKEMREWVRDWLELDYISPYEDVS 281
           E      R  E E  +  ID  P FN   LP G  L K     +  + ++ YISPY+D S
Sbjct: 259 ELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFS 318

Query: 282 HLAQASPEMEKRTVGVFHELLSLSLFKRIPVPILGKFSDEYRFSNAFSSVFTRHSGIFYL 341
           HL   + E EK   GV HELLSL+  KR  V  L  F +E+RFS     +  RH  +FY+
Sbjct: 319 HLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYV 378

Query: 342 SLKGGIETAMLREAYKGSQLIDCDPLLEIKDKFVELL 369
           SLKG  ++  LREAY+ S+LID DPL  +K+K   L+
Sbjct: 379 SLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALV 407

BLAST of CmoCh17G011380 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 169.9 bits (429), Expect = 4.3e-42
Identity = 115/376 (30.59%), Postives = 189/376 (50.27%), Query Frame = 0

Query: 21  CFVRRKFVLQIR-SVSSLKVIWRKDSRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRY 80
           C  R  F  Q R  + ++K+ W KD  LD  +  +K  +    +V  +   P   +P+  
Sbjct: 18  CRERFDFFYQQRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFK 77

Query: 81  LEKRRQRLRL--NVSIKTFMSFNPGLL--NTYYDRIKPKSEPVLFLRPSDRLRGFLEEEK 140
           L   R +L L   + +  F+   P +   + Y+D     S P   L  +        EE 
Sbjct: 78  LLPHRGQLGLPQELKLSAFIRRYPNIFVEHCYWDS-AGTSVPCFGL--TRETIDLYYEEV 137

Query: 141 RITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFLVNLVPKYPEYFQIIG 200
            ++  NE  ++ +LCKLLM++ ++ LS+  +  ++ + G P D+  +L+ K+P+ F ++ 
Sbjct: 138 DVSRVNERDVLVRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVK 197

Query: 201 SPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYNLPPGFFLRKEMREWV 260
              D    L+L+  +   A S ++ R +      G D R  F      GF L+++  EW+
Sbjct: 198 LSSDLDG-LKLIHWDEHLAVSQMQLRED-----VGNDERMAFPVKFTRGFGLKRKSIEWL 257

Query: 261 RDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRIPVPILGKFSDEYRFS 320
           ++W  L Y SPY D SHL   +   EKR VGVFHELL L++ K+     +      +   
Sbjct: 258 QEWQRLPYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALP 317

Query: 321 NAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEIKDKFVELLEEGWRER 380
             F+ VF RH GIFY+S+K   +T +LREAY    LI+  PL+E+++KF  ++ EG+ +R
Sbjct: 318 QKFTKVFERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNEGFLDR 377

Query: 381 AEQRRQQAKQVRNDME 392
           +  R    K V  D+E
Sbjct: 378 S--RGLYQKSVEADLE 382

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0MFS51.5e-4435.01Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q65XL52.4e-4233.91Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
B6TTV84.6e-4132.85Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
Q689D69.3e-3427.06Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
Q9ZUZ67.4e-2324.78Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
Match NameE-valueIdentityDescription
A0A6J1GN701.7e-224100.00protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114560... [more]
A0A6J1JZH38.3e-21997.49protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488826... [more]
A0A0A0K5593.2e-19485.64PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G392430 PE=4 S... [more]
A0A1S3BS578.6e-19284.63protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492691 PE=4... [more]
A0A5D3DBW61.2e-19084.13Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
Match NameE-valueIdentityDescription
XP_022953521.13.5e-224100.00protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953522.1 protei... [more]
KAG7014426.11.5e-22299.25Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy... [more]
KAG6575893.14.3e-22299.00Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperm... [more]
XP_022992526.11.7e-21897.49protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992527.1 protein ... [more]
XP_038899043.11.5e-19889.65protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT3G63090.11.2e-15670.54Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT2G31290.15.2e-4832.55Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT2G31290.25.2e-4832.55Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G01037.11.1e-4535.01Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G48040.14.3e-4230.59Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 373..393
NoneNo IPR availablePANTHERPTHR31476:SF3UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEINcoord: 19..394
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 43..372
e-value: 5.6E-101
score: 337.7
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 19..394

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G011380.1CmoCh17G011380.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding