CmoCh17G010980 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G010980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Glutaredoxin domain-containing protein
Location	Cmo_Chr17: 9044263 .. 9046058 (+)
RNA-Seq Expression	CmoCh17G010980
Synteny	CmoCh17G010980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGATTGAGAAATTTGGCATCTCAGAAAGCAGTAGTGATTTTTTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTCTTTTATGAGCTTGGTGCAAGCCCTGCTATTCACGAGCTTGACCATGAAGCAAATGGGCGAGAAATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAATTTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTGTAATGCTACAAAAAGCTAAACCAGGTGGTTCTTTCTTTGTTTCGTTTTGTCCTTTTTCCCCCCTGCCTTTATAATGTTGAAAAGGCTCGTACAAAATGTTGTAAGAAGGCTCTGATAGTTCTTGAGTTTACTTACTGAACTGTATAAAATGAAGCCATACTTACCCTGAGATCTAAATGTAGGTTATCTTTTCCTTGAACTCAATATTGTTTACCTCTTCATGCATTACAAAGAAAAAGGAAAAAAATATTAAATATTGATTCCAACAAGCCCACTACACTGTCTACGTAGGATTAGTCTTCATTGACTGATTTTGTTATAAAAAGTGAATAATAAGATAGGGCAGCAGCATGAGAGGTTTTTGTGGGTAAAACTGGTAGTTCTGTTTTTCAAGTCTACCATTGATTAAAATAGGAAGATGCACCACTGAGGAATTATGCACTTGCGAAGAAAAATCTCTTCTTGCAAATTGAACTGTCTGAAGTTGTCATTGGCAAAATTGTGTACTTGTTGACGGTTGTGCTTTTCATTAGATCTTCATACTGCTGCCAGACTGATAACCTGTCTGTACACATCATAATACTTAATTATGAGGCAAGGCATGTTGATAAAGACATGCACATGACATTTCTGCCTTACAAATTGAGCTTCAGATACTAGTGATCTAGTTTAAGCATCACATGTGGCTGGGGTTAATTTGATTGATCAGCGCATAACATTTCATATTTAGTTATTTAGATCCTTTACTAGTTCAGGGACAACCTGGTGATGCTGTAACTTTTGTGCCTGCCATGAACCTTTTAAATATCTTGAGCCAAAACCAATTTTGGAGACAAAATCAATAAATGCATTGAATTATGCTTTATTGTGCAGCCAACATGTTTTCGACCAAAAAGTAAGTTAGAGGTTTGAATCCCCACCCCCAAGTGTTGTTCAGCTCAGGAAAAAACATTATGCTTTAATGTTCAATGCTATATACGTATATATGTACACTCATCTAAAATATCAATAGAGCGTGTCTGTACATGTAACCAAGAACAGGATATGCTCTGTTGACAGTATGAGCATGGTTATATACTAGATATTACATTGGAGAAGATTTTATGAAGCTATTATTTTTCAGAGAACTCTGTCAATTGAATAAAGGGGGAAAGTTCAATCATTCCAATTCATATATTTGTATAACACCAGGCTGTGGAACTTAACTCTGTTAGGTAAATGAAGCTTAGCAAGCTCCACATGCAAGGAATCATACAAGTTGGTGGACAGAATACAGAGAACTACAGCCACTGAAGCCTGTCTTCGTAATGATTCAAAGAAGGTGATTGGAGAATCTGGTATTTATTGATTGGCATTACAGAATTTCTTGCTTTTGTTTTATTGTTTCTTGATAGCTATATTCTCATTTCCACAAACTCTGCAAAGTGGAAGACACGGTCATTGTTTTTACACGTCAGACAAAGATTGATAGGATAAATATCGCCACTTAA

mRNA sequence

ATGGATAGATTGAGAAATTTGGCATCTCAGAAAGCAGTAGTGATTTTTTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTCTTTTATGAGCTTGGTGCAAGCCCTGCTATTCACGAGCTTGACCATGAAGCAAATGGGCGAGAAATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAATTTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTCTTAGCAAGCTCCACATGCAAGGAATCATACAAGTTGGTGGACAGAATACAGAGAACTACAGCCACTGAAGCCTGTCTTCGTAATGATTCAAAGAAGCTATATTCTCATTTCCACAAACTCTGCAAAGTGGAAGACACGGTCATTGTTTTTACACGTCAGACAAAGATTGATAGGATAAATATCGCCACTTAA

Coding sequence (CDS)

ATGGATAGATTGAGAAATTTGGCATCTCAGAAAGCAGTAGTGATTTTTTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTCTTTTATGAGCTTGGTGCAAGCCCTGCTATTCACGAGCTTGACCATGAAGCAAATGGGCGAGAAATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAATTTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTCTTAGCAAGCTCCACATGCAAGGAATCATACAAGTTGGTGGACAGAATACAGAGAACTACAGCCACTGAAGCCTGTCTTCGTAATGATTCAAAGAAGCTATATTCTCATTTCCACAAACTCTGCAAAGTGGAAGACACGGTCATTGTTTTTACACGTCAGACAAAGATTGATAGGATAAATATCGCCACTTAA

Protein sequence

MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWFLASSTCKESYKLVDRIQRTTATEACLRNDSKKLYSHFHKLCKVEDTVIVFTRQTKIDRINIAT

Homology

[Close]

BLAST of CmoCh17G010980 vs. ExPASy Swiss-Prot
Match: Q9LYC6 (Glutaredoxin-C11 OS=Arabidopsis thaliana OX=3702 GN=GRXC11 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-36
Identity = 73/102 (71.57%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           M+R+R+L+S+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  GRE++ ALR LG
Sbjct: 1   MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALG 60

Query: 61  -CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
             NP+VPAVF+GG++IGSAKD+IS HV+G LKQML DAKAIW
Sbjct: 61  SSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIW 102

[Close]

BLAST of CmoCh17G010980 vs. ExPASy Swiss-Prot
Match: O82254 (Putative glutaredoxin-C12 OS=Arabidopsis thaliana OX=3702 GN=GRXC12 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.5e-33
Identity = 68/102 (66.67%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWAL-RGL 60
           M+R+R+LAS+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  G +++ AL R  
Sbjct: 1   MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61  GCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           G NP+VPAVF+GG+++GSAKDVIS HV+G LKQML  + AIW
Sbjct: 61  GSNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAIW 102

[Close]

BLAST of CmoCh17G010980 vs. ExPASy Swiss-Prot
Match: Q9LIF1 (Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana OX=3702 GN=GRXS10 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-29
Identity = 59/101 (58.42%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MD +  LASQ+AVVIFSKS+C + H+I+ LFYE G SPAI E+D +  G++I+WAL  LG
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+P+VPAVF+GGKF+G+A  V++LH+NG LK +L +A A+W
Sbjct: 61  CSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALW 101

[Close]

BLAST of CmoCh17G010980 vs. ExPASy Swiss-Prot
Match: O23421 (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 7.2e-25
Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           M+ L+ + S+K+VVIFSK+SC + H+I+TLF +LG +P I+ELD  + G+EI+ AL  LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML  A A+W
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALW 101

[Close]

BLAST of CmoCh17G010980 vs. ExPASy Swiss-Prot
Match: Q8L8Z8 (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana OX=3702 GN=GRXS2 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-24
Identity = 52/101 (51.49%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MD +  +  ++ VVI+SKSSC + H+I+TL  + GA+PA++ELD  + GREI+ AL  LG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+P+VP VFIGG+ +G A +V+SLH+NG L  ML  A A+W
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALW 101

[Close]

BLAST of CmoCh17G010980 vs. ExPASy TrEMBL
Match: A0A6J1JXM7 (glutaredoxin-C11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 8.0e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of CmoCh17G010980 vs. ExPASy TrEMBL
Match: A0A6J1GPY2 (glutaredoxin-C11-like OS=Cucurbita moschata OX=3662 GN=LOC111456468 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 8.0e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of CmoCh17G010980 vs. ExPASy TrEMBL
Match: A0A5A7VIX0 (Glutaredoxin-C11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00060 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.3e-50
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of CmoCh17G010980 vs. ExPASy TrEMBL
Match: A0A0A0K7M4 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G394580 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.3e-50
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of CmoCh17G010980 vs. ExPASy TrEMBL
Match: A0A1S3BRC8 (glutaredoxin-C11 OS=Cucumis melo OX=3656 GN=LOC103492861 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.3e-50
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of CmoCh17G010980 vs. NCBI nr
Match: KAE8646327.1 (hypothetical protein Csa_015602 [Cucumis sativus])

HSP 1 Score: 256.9 bits (655), Expect = 1.2e-64
Identity = 129/157 (82.17%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWFLASSTC-KESYKLVDRIQ 120
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWFL SSTC KESYKLVDRI+
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWFLTSSTCKKESYKLVDRIR 120

Query: 121 RTTATEACLRNDSKKLYSHFHKLCKVEDTVIVFTRQT 157
           RTTAT A L  DSKK+      +   E +V++F++ +
Sbjct: 121 RTTATGAFLHKDSKKVIGRIWLV--AERSVVIFSKSS 155

[Close]

BLAST of CmoCh17G010980 vs. NCBI nr
Match: XP_022954101.1 (glutaredoxin-C11-like [Cucurbita moschata] >XP_022992474.1 glutaredoxin-C11-like isoform X2 [Cucurbita maxima] >XP_023549403.1 glutaredoxin-C11-like [Cucurbita pepo subsp. pepo] >KAG6575856.1 Glutaredoxin-C11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014392.1 Glutaredoxin-C11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of CmoCh17G010980 vs. NCBI nr
Match: XP_038876720.1 (glutaredoxin-C11 [Benincasa hispida])

HSP 1 Score: 208.8 bits (530), Expect = 3.7e-50
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDH+ANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of CmoCh17G010980 vs. NCBI nr
Match: XP_008451630.1 (PREDICTED: glutaredoxin-C11 [Cucumis melo] >XP_031744239.1 glutaredoxin-C11 [Cucumis sativus] >KAA0068043.1 glutaredoxin-C11-like [Cucumis melo var. makuwa] >TYK18085.1 glutaredoxin-C11-like [Cucumis melo var. makuwa])

HSP 1 Score: 208.4 bits (529), Expect = 4.8e-50
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of CmoCh17G010980 vs. NCBI nr
Match: XP_022146613.1 (glutaredoxin-C11 [Momordica charantia])

HSP 1 Score: 203.0 bits (515), Expect = 2.0e-48
Identity = 96/101 (95.05%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MD LRNLASQKAVVIFSKSSCYICHS+QTLFYELG SPAIHELDHEANGREIDWALRGLG
Sbjct: 1   MDTLRNLASQKAVVIFSKSSCYICHSVQTLFYELGXSPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIG++KDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of CmoCh17G010980 vs. TAIR 10
Match: AT3G62950.1 (Thioredoxin superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 73/102 (71.57%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           M+R+R+L+S+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  GRE++ ALR LG
Sbjct: 1   MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALG 60

Query: 61  -CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
             NP+VPAVF+GG++IGSAKD+IS HV+G LKQML DAKAIW
Sbjct: 61  SSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIW 102

[Close]

BLAST of CmoCh17G010980 vs. TAIR 10
Match: AT2G47870.1 (Thioredoxin superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 3.9e-34
Identity = 68/102 (66.67%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWAL-RGL 60
           M+R+R+LAS+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  G +++ AL R  
Sbjct: 1   MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61  GCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           G NP+VPAVF+GG+++GSAKDVIS HV+G LKQML  + AIW
Sbjct: 61  GSNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAIW 102

[Close]

BLAST of CmoCh17G010980 vs. TAIR 10
Match: AT3G21460.1 (Glutaredoxin family protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 59/101 (58.42%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MD +  LASQ+AVVIFSKS+C + H+I+ LFYE G SPAI E+D +  G++I+WAL  LG
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+P+VPAVF+GGKF+G+A  V++LH+NG LK +L +A A+W
Sbjct: 61  CSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALW 101

[Close]

BLAST of CmoCh17G010980 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 5.1e-26
Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           M+ L+ + S+K+VVIFSK+SC + H+I+TLF +LG +P I+ELD  + G+EI+ AL  LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML  A A+W
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALW 101

[Close]

BLAST of CmoCh17G010980 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25
Identity = 52/101 (51.49%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MD +  +  ++ VVI+SKSSC + H+I+TL  + GA+PA++ELD  + GREI+ AL  LG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+P+VP VFIGG+ +G A +V+SLH+NG L  ML  A A+W
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALW 101

The following BLAST results are available for this feature:

BLAST of CmoCh17G010980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYC6	1.8e-36	71.57	Glutaredoxin-C11 OS=Arabidopsis thaliana OX=3702 GN=GRXC11 PE=3 SV=1	[more]
O82254	5.5e-33	66.67	Putative glutaredoxin-C12 OS=Arabidopsis thaliana OX=3702 GN=GRXC12 PE=3 SV=1	[more]
Q9LIF1	1.7e-29	58.42	Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana OX=3702 GN=GRXS10 PE=3 SV=1	[more]
O23421	7.2e-25	52.48	Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1	[more]
Q8L8Z8	1.6e-24	51.49	Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana OX=3702 GN=GRXS2 PE=3 SV=1	[more]

BLAST of CmoCh17G010980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JXM7	8.0e-51	100.00	glutaredoxin-C11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=...	[more]
A0A6J1GPY2	8.0e-51	100.00	glutaredoxin-C11-like OS=Cucurbita moschata OX=3662 GN=LOC111456468 PE=3 SV=1	[more]
A0A5A7VIX0	2.3e-50	98.02	Glutaredoxin-C11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold41...	[more]
A0A0A0K7M4	2.3e-50	98.02	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G39458...	[more]
A0A1S3BRC8	2.3e-50	98.02	glutaredoxin-C11 OS=Cucumis melo OX=3656 GN=LOC103492861 PE=3 SV=1	[more]

BLAST of CmoCh17G010980 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646327.1	1.2e-64	82.17	hypothetical protein Csa_015602 [Cucumis sativus]	[more]
XP_022954101.1	1.6e-50	100.00	glutaredoxin-C11-like [Cucurbita moschata] >XP_022992474.1 glutaredoxin-C11-like...	[more]
XP_038876720.1	3.7e-50	99.01	glutaredoxin-C11 [Benincasa hispida]	[more]
XP_008451630.1	4.8e-50	98.02	PREDICTED: glutaredoxin-C11 [Cucumis melo] >XP_031744239.1 glutaredoxin-C11 [Cuc...	[more]
XP_022146613.1	2.0e-48	95.05	glutaredoxin-C11 [Momordica charantia]	[more]

BLAST of CmoCh17G010980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62950.1	1.3e-37	71.57	Thioredoxin superfamily protein	[more]
AT2G47870.1	3.9e-34	66.67	Thioredoxin superfamily protein	[more]
AT3G21460.1	1.2e-30	58.42	Glutaredoxin family protein	[more]
AT4G15700.1	5.1e-26	52.48	Thioredoxin superfamily protein	[more]
AT5G18600.1	1.1e-25	51.49	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 72..85 score: 31.85 coord: 13..31 score: 35.31 coord: 58..71 score: 34.23
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 13..75 e-value: 4.1E-9 score: 36.5
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 5..101 e-value: 2.6E-37 score: 124.8
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..101
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..103 e-value: 6.6E-25 score: 88.9
None	No IPR available	PANTHER	PTHR10168:SF202	GLUTAREDOXIN-C1 PROTEIN	coord: 1..101
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 1..101 score: 19.844744
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 12..93 e-value: 1.14893E-34 score: 114.559
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G010980.1	CmoCh17G010980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0097573	glutathione oxidoreductase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity