CmoCh17G010490 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh17G010490
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionproline-rich protein 3-like
LocationCmo_Chr17: 8846099 .. 8846371 (-)
RNA-Seq ExpressionCmoCh17G010490
SyntenyCmoCh17G010490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTCGCAAGGCGGCTGATCGCTGCGACTCCGGTGGTGCTGCTCTGGCTTTTGGCCGCCGCTTCCGTTTCTTCTGCCGCAGATTATTATGAATTTCCCGACGACCAAAATTTCGGCGGAGCGGGGGATAACGGAATCCCTATTTATGAGAAACCGCTCCCGTCGTACGGCCGTGAAGTGGCGGCGCCGCTCCTTATCGCCGTTGAAGGAGTTGTTTCTTGTAGAAATAACACTCAGTATCATCCTCTTAAAGGTGAACTAACTATCTAG

mRNA sequence

ATGGCTCTCGCAAGGCGGCTGATCGCTGCGACTCCGGTGGTGCTGCTCTGGCTTTTGGCCGCCGCTTCCGTTTCTTCTGCCGCAGATTATTATGAATTTCCCGACGACCAAAATTTCGGCGGAGCGGGGGATAACGGAATCCCTATTTATGAGAAACCGCTCCCGTCGTACGGCCGTGAAGTGGCGGCGCCGCTCCTTATCGCCGTTGAAGGAGTTGTTTCTTGTAGAAATAACACTCAGTATCATCCTCTTAAAGGTGAACTAACTATCTAG

Coding sequence (CDS)

ATGGCTCTCGCAAGGCGGCTGATCGCTGCGACTCCGGTGGTGCTGCTCTGGCTTTTGGCCGCCGCTTCCGTTTCTTCTGCCGCAGATTATTATGAATTTCCCGACGACCAAAATTTCGGCGGAGCGGGGGATAACGGAATCCCTATTTATGAGAAACCGCTCCCGTCGTACGGCCGTGAAGTGGCGGCGCCGCTCCTTATCGCCGTTGAAGGAGTTGTTTCTTGTAGAAATAACACTCAGTATCATCCTCTTAAAGGTGAACTAACTATCTAG

Protein sequence

MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGREVAAPLLIAVEGVVSCRNNTQYHPLKGELTI
Homology
BLAST of CmoCh17G010490 vs. ExPASy TrEMBL
Match: A0A6J1GP42 (proline-rich protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111456165 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.5e-40
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query: 1  MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGRE 60
          MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGRE
Sbjct: 1  MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGRE 60

Query: 61 VAAPLLIAVEGVVSCRNNTQYHPLKG 87
          VAAPLLIAVEGVVSCRNNTQYHPLKG
Sbjct: 61 VAAPLLIAVEGVVSCRNNTQYHPLKG 86

BLAST of CmoCh17G010490 vs. ExPASy TrEMBL
Match: A0A6J1JUA4 (proline-rich protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111487958 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.6e-37
Identity = 81/86 (94.19%), Postives = 84/86 (97.67%), Query Frame = 0

Query: 1  MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGRE 60
          MA ARRLIAATPVVLL LLAAASVSSAADYYEFPDDQN+GGAGDNGIPIYEKPLPSYGRE
Sbjct: 1  MAFARRLIAATPVVLLCLLAAASVSSAADYYEFPDDQNYGGAGDNGIPIYEKPLPSYGRE 60

Query: 61 VAAPLLIAVEGVVSCRNNTQYHPLKG 87
          VAAPL+IAVEGVVSC+NNTQYHPLKG
Sbjct: 61 VAAPLIIAVEGVVSCKNNTQYHPLKG 86

BLAST of CmoCh17G010490 vs. ExPASy TrEMBL
Match: A0A5A7VJJ1 (Proline-rich protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00760 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-21
Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 0

Query: 1  MALARRLI-AATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGR 60
          MALAR+LI +A PV+LLWLLA+A VSSAADYY+FPD       GD G+PIY+K LPSYG 
Sbjct: 1  MALARQLIFSAAPVLLLWLLASAVVSSAADYYDFPD------IGDAGVPIYDKSLPSYGS 60

Query: 61 EVAAPLLIAVEGVVSCRNNTQYHPLKG 87
          +   PL IAVEGVVSC+N T+YHPLKG
Sbjct: 61 DGMVPLRIAVEGVVSCKNGTKYHPLKG 81

BLAST of CmoCh17G010490 vs. ExPASy TrEMBL
Match: A0A1S3BRP9 (proline-rich protein 3-like OS=Cucumis melo OX=3656 GN=LOC103492799 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-21
Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 0

Query: 1  MALARRLI-AATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGR 60
          MALAR+LI +A PV+LLWLLA+A VSSAADYY+FPD       GD G+PIY+K LPSYG 
Sbjct: 1  MALARQLIFSAAPVLLLWLLASAVVSSAADYYDFPD------IGDAGVPIYDKSLPSYGS 60

Query: 61 EVAAPLLIAVEGVVSCRNNTQYHPLKG 87
          +   PL IAVEGVVSC+N T+YHPLKG
Sbjct: 61 DGMVPLRIAVEGVVSCKNGTKYHPLKG 81

BLAST of CmoCh17G010490 vs. ExPASy TrEMBL
Match: A0A0A0K7U6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398160 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.3e-20
Identity = 57/87 (65.52%), Postives = 66/87 (75.86%), Query Frame = 0

Query: 1  MALARRL-IAATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGR 60
          MALAR+L I+A PV+LLWLLA+A VSSA DYY FPD       GD G+PIY+K LPSYG 
Sbjct: 1  MALARQLIISAAPVLLLWLLASADVSSATDYYGFPD------IGDAGVPIYDKSLPSYGS 60

Query: 61 EVAAPLLIAVEGVVSCRNNTQYHPLKG 87
          +   PL IAVEGVVSC+N  +YHPLKG
Sbjct: 61 DGTVPLSIAVEGVVSCKNGNKYHPLKG 81

BLAST of CmoCh17G010490 vs. NCBI nr
Match: XP_022953718.1 (proline-rich protein 3-like [Cucurbita moschata])

HSP 1 Score: 173.3 bits (438), Expect = 9.3e-40
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query: 1  MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGRE 60
          MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGRE
Sbjct: 1  MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGRE 60

Query: 61 VAAPLLIAVEGVVSCRNNTQYHPLKG 87
          VAAPLLIAVEGVVSCRNNTQYHPLKG
Sbjct: 61 VAAPLLIAVEGVVSCRNNTQYHPLKG 86

BLAST of CmoCh17G010490 vs. NCBI nr
Match: KAG6575813.1 (Proline-rich protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.2 bits (435), Expect = 2.1e-39
Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0

Query: 1  MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGRE 60
          MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQN+GGAGDNGIPIYEKPLPSYGRE
Sbjct: 1  MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNYGGAGDNGIPIYEKPLPSYGRE 60

Query: 61 VAAPLLIAVEGVVSCRNNTQYHPLKG 87
          VAAPLLIAVEGVVSCRNNTQYHPLKG
Sbjct: 61 VAAPLLIAVEGVVSCRNNTQYHPLKG 86

BLAST of CmoCh17G010490 vs. NCBI nr
Match: KAG7014354.1 (Proline-rich protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 170.6 bits (431), Expect = 6.0e-39
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 1  MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGRE 60
          MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQN+GGAGDNGIPIYEKPLPSYGRE
Sbjct: 1  MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNYGGAGDNGIPIYEKPLPSYGRE 60

Query: 61 VAAPLLIAVEGVVSCRNNTQYHPLKGEL 89
          VAAPLLIAVEGVVSCRNNTQYHPLK  L
Sbjct: 61 VAAPLLIAVEGVVSCRNNTQYHPLKAGL 88

BLAST of CmoCh17G010490 vs. NCBI nr
Match: XP_023549401.1 (proline-rich protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0

Query: 1  MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGRE 60
          MAL RRLIAATPVVLLWLLAAASVSSAADYYEFPDDQN+GGAGDNGIPIYEKPLPSYGRE
Sbjct: 1  MALGRRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNYGGAGDNGIPIYEKPLPSYGRE 60

Query: 61 VAAPLLIAVEGVVSCRNNTQYHPLKG 87
          VAAPLLIAVEGVVSC+NNTQYHPLKG
Sbjct: 61 VAAPLLIAVEGVVSCKNNTQYHPLKG 86

BLAST of CmoCh17G010490 vs. NCBI nr
Match: XP_022991244.1 (proline-rich protein 3-like [Cucurbita maxima])

HSP 1 Score: 163.7 bits (413), Expect = 7.4e-37
Identity = 81/86 (94.19%), Postives = 84/86 (97.67%), Query Frame = 0

Query: 1  MALARRLIAATPVVLLWLLAAASVSSAADYYEFPDDQNFGGAGDNGIPIYEKPLPSYGRE 60
          MA ARRLIAATPVVLL LLAAASVSSAADYYEFPDDQN+GGAGDNGIPIYEKPLPSYGRE
Sbjct: 1  MAFARRLIAATPVVLLCLLAAASVSSAADYYEFPDDQNYGGAGDNGIPIYEKPLPSYGRE 60

Query: 61 VAAPLLIAVEGVVSCRNNTQYHPLKG 87
          VAAPL+IAVEGVVSC+NNTQYHPLKG
Sbjct: 61 VAAPLIIAVEGVVSCKNNTQYHPLKG 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GP424.5e-40100.00proline-rich protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111456165 PE=4 S... [more]
A0A6J1JUA43.6e-3794.19proline-rich protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111487958 PE=4 SV=... [more]
A0A5A7VJJ11.6e-2167.82Proline-rich protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A1S3BRP91.6e-2167.82proline-rich protein 3-like OS=Cucumis melo OX=3656 GN=LOC103492799 PE=4 SV=1[more]
A0A0A0K7U62.3e-2065.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398160 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022953718.19.3e-40100.00proline-rich protein 3-like [Cucurbita moschata][more]
KAG6575813.12.1e-3998.84Proline-rich protein 3, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7014354.16.0e-3996.59Proline-rich protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023549401.11.3e-3896.51proline-rich protein 3-like [Cucurbita pepo subsp. pepo][more]
XP_022991244.17.4e-3794.19proline-rich protein 3-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G010490.1CmoCh17G010490.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0071944 cell periphery