CmoCh17G010260 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G010260
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	GATA transcription factor-like protein
Location	Cmo_Chr17: 8760922 .. 8762643 (+)
RNA-Seq Expression	CmoCh17G010260
Synteny	CmoCh17G010260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCAATTGGAGGAAGGAAAGAGTGTTAGCGATGCTGGCCCCGAAGGTGATGGATTGCGATGTCCCACATTGGTTGGGTAGGAGAACAAACCACCATTATAAAGGGCGTGGAAACCTTCTCCTAGCAGGGCTCATGTTTTAAAGCCTAGAGAGAAGCCCAACATGAAAAGCTATTGAACAAGATCTGTTAAGAGGTCGAAGGAGGGAAACCCAACCGGAAAAGTTCAAAGAAGACAATATCTACTGGCTGTCGAAATTGGAGGGAAGCCCAACCGAAAAAGCTAAAAGAGAACCATATCTACTTGCGGTGGAAATGGACGTAAATTCGATGCACAAAGATGAAGAATACCAATGAGGGAGTGAATAAGGGCGAAAAGTGGAAGAAAAAATAGGAGCAGAATCGGTGAAGGTTCTAGGCACATCTACAACCACGCGACAAGACACAAAAATAATAATTAAAAAAATATGGAATAACCCAGAACTTACCACTCCAAGTACACGTGGACGCTGTGCTGTCCACGCCACGTACTCCACCCGCCACGTGCCATTTCCTCTTCCCATCTCTAGAAACTCCGCCTCTTTCCTTTTTAACCTCGCCGCAAACCGGAATTCGGAAGTCATAAACCATGACATCCAGATTGACGGCGATCGCATCGAAGCGGAATTGGACCTTCTCTCTGGCCCAGTTCCAACGCCTCAGGCGATGTGGTTTGACGACATGTCGTACCGCTGACCCTTCGGTTCATGCCAACGACGACAACCACCCCGCCGTTCCATCCGGTGAACCAGAGGTATTTCTTCTTTCTCTCATCATATAATGATTTATAAGCGCTTTTCAAGGAAGCAATATCTTAAACTTTTTTCTGTTTTTGTAGCAATCACAGGATAATTTAGAGCCAGACAGTGCGAAATCCAATTACGAAAGAGACGATTCCAAACAGGGAGATTCAAATGGGCCGTTTGCGCCACCGAAGGCTCAATACGCCTCCTCCCCTCGCTTAGAAACCACGCCGGTCGCCCAGGCCTCGAAGCCTATCACTCAACAAAAAAGAGCTCACAGTACGGTACTAGCCGACGTCAGCTGCATCGGCTTCGACGGCGGGCCGTTTCCCGCTGAGGAAAAAAACAGAGAAAAAGACCGTAAAGAACAAGACGACGACGAAAGAGAATACTACAAGCACCACAAGGCATCGCCGTTAGCCGAGATCGAGTTTGTTGACACGCGGAAACCGATAACTAGAGCGACGGACGGGACGGCGTACGACGGCGGCGGTAAGGATATGATAGGGTGGTTACCGGAGCAGGAGGATACAGTGGATGATTCTCTTCAAAGAGCGACGGAGATTTGGAAACAAAATGCTATGCGCGGGGATCCCGATGCTCCGCAGTCGAGAGTTCTTAGAGCTCTGCGGGGTGAACAGTTTTAAATAGAGTGTCAGAACTGTAATTTCAATAAAACTTGAAATCCGATGTGGGAGAAGGAAGGTCGGTTGATTTATACCCTGCATCTTTTACCCGACTTGAATTCTCTTCCGATGTGGGAGAACCAAGATGAATCCCGCACGATTGTTGGCACGTGCGAATAGGGTTAAAATAATGGTCAATTTTTGGCACGTCTTTTGATGATGGATGGTTCCGTAGAAGCTAAATCACTAGCCCACTGGGTTGTGCACTCTCGCCCATACACATGCCAGAAGTCTTAACTAATTAATGATGCGCCAC

mRNA sequence

CATCAATTGGAGGAAGGAAAGAGTGTTAGCGATGCTGGCCCCGAAGGTGATGGATTGCGATGTCCCACATTGGTTGGGTAGGAGAACAAACCACCATTATAAAGGGCGTGGAAACCTTCTCCTAGCAGGGCTCATGTTTTAAAGCCTAGAGAGAAGCCCAACATGAAAAGCTATTGAACAAGATCTGTTAAGAGGTCGAAGGAGGGAAACCCAACCGGAAAAGTTCAAAGAAGACAATATCTACTGGCTGTCGAAATTGGAGGGAAGCCCAACCGAAAAAGCTAAAAGAGAACCATATCTACTTGCGGTGGAAATGGACGTAAATTCGATGCACAAAGATGAAGAATACCAATGAGGGAGTGAATAAGGGCGAAAAGTGGAAGAAAAAATAGGAGCAGAATCGGTGAAGGTTCTAGGCACATCTACAACCACGCGACAAGACACAAAAATAATAATTAAAAAAATATGGAATAACCCAGAACTTACCACTCCAAGTACACGTGGACGCTGTGCTGTCCACGCCACGTACTCCACCCGCCACGTGCCATTTCCTCTTCCCATCTCTAGAAACTCCGCCTCTTTCCTTTTTAACCTCGCCGCAAACCGGAATTCGGAAGTCATAAACCATGACATCCAGATTGACGGCGATCGCATCGAAGCGGAATTGGACCTTCTCTCTGGCCCAGTTCCAACGCCTCAGGCGATGTGGTTTGACGACATGTCGTACCGCTGACCCTTCGGTTCATGCCAACGACGACAACCACCCCGCCGTTCCATCCGGTGAACCAGAGCAATCACAGGATAATTTAGAGCCAGACAGTGCGAAATCCAATTACGAAAGAGACGATTCCAAACAGGGAGATTCAAATGGGCCGTTTGCGCCACCGAAGGCTCAATACGCCTCCTCCCCTCGCTTAGAAACCACGCCGGTCGCCCAGGCCTCGAAGCCTATCACTCAACAAAAAAGAGCTCACAGTACGGTACTAGCCGACGTCAGCTGCATCGGCTTCGACGGCGGGCCGTTTCCCGCTGAGGAAAAAAACAGAGAAAAAGACCGTAAAGAACAAGACGACGACGAAAGAGAATACTACAAGCACCACAAGGCATCGCCGTTAGCCGAGATCGAGTTTGTTGACACGCGGAAACCGATAACTAGAGCGACGGACGGGACGGCGTACGACGGCGGCGGTAAGGATATGATAGGGTGGTTACCGGAGCAGGAGGATACAGTGGATGATTCTCTTCAAAGAGCGACGGAGATTTGGAAACAAAATGCTATGCGCGGGGATCCCGATGCTCCGCAGTCGAGAGTTCTTAGAGCTCTGCGGGGTGAACAGTTTTAAATAGAGTGTCAGAACTGTAATTTCAATAAAACTTGAAATCCGATGTGGGAGAAGGAAGGTCGGTTGATTTATACCCTGCATCTTTTACCCGACTTGAATTCTCTTCCGATGTGGGAGAACCAAGATGAATCCCGCACGATTGTTGGCACGTGCGAATAGGGTTAAAATAATGGTCAATTTTTGGCACGTCTTTTGATGATGGATGGTTCCGTAGAAGCTAAATCACTAGCCCACTGGGTTGTGCACTCTCGCCCATACACATGCCAGAAGTCTTAACTAATTAATGATGCGCCAC

Coding sequence (CDS)

ATGACATCCAGATTGACGGCGATCGCATCGAAGCGGAATTGGACCTTCTCTCTGGCCCAGTTCCAACGCCTCAGGCGATGTGGTTTGACGACATGTCGTACCGCTGACCCTTCGGTTCATGCCAACGACGACAACCACCCCGCCGTTCCATCCGGTGAACCAGAGCAATCACAGGATAATTTAGAGCCAGACAGTGCGAAATCCAATTACGAAAGAGACGATTCCAAACAGGGAGATTCAAATGGGCCGTTTGCGCCACCGAAGGCTCAATACGCCTCCTCCCCTCGCTTAGAAACCACGCCGGTCGCCCAGGCCTCGAAGCCTATCACTCAACAAAAAAGAGCTCACAGTACGGTACTAGCCGACGTCAGCTGCATCGGCTTCGACGGCGGGCCGTTTCCCGCTGAGGAAAAAAACAGAGAAAAAGACCGTAAAGAACAAGACGACGACGAAAGAGAATACTACAAGCACCACAAGGCATCGCCGTTAGCCGAGATCGAGTTTGTTGACACGCGGAAACCGATAACTAGAGCGACGGACGGGACGGCGTACGACGGCGGCGGTAAGGATATGATAGGGTGGTTACCGGAGCAGGAGGATACAGTGGATGATTCTCTTCAAAGAGCGACGGAGATTTGGAAACAAAATGCTATGCGCGGGGATCCCGATGCTCCGCAGTCGAGAGTTCTTAGAGCTCTGCGGGGTGAACAGTTTTAA

Protein sequence

MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDNLEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVLADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKPITRATDGTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF

Homology

[Close]

BLAST of CmoCh17G010260 vs. ExPASy TrEMBL
Match: A0A6J1GPT4 (uncharacterized protein LOC111456388 OS=Cucurbita moschata OX=3662 GN=LOC111456388 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.5e-130
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60
           MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN
Sbjct: 1   MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60

Query: 61  LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120
           LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL
Sbjct: 61  LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120

Query: 121 ADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKPITRATD 180
           ADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKPITRATD
Sbjct: 121 ADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKPITRATD 180

Query: 181 GTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF 239
           GTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF
Sbjct: 181 GTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF 238

[Close]

BLAST of CmoCh17G010260 vs. ExPASy TrEMBL
Match: A0A6J1JL82 (uncharacterized protein LOC111487953 OS=Cucurbita maxima OX=3661 GN=LOC111487953 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 3.9e-123
Identity = 225/238 (94.54%), Postives = 230/238 (96.64%), Query Frame = 0


Query: 1   MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60
           M SRLTAIASKRNW FSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN
Sbjct: 1   MPSRLTAIASKRNWAFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60

Query: 61  LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120
           LEPD AK+NY  DDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL
Sbjct: 61  LEPDRAKANYASDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120

Query: 121 ADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKPITRATD 180
           ADVSCIGFDGGPFP EEKNREKDRKEQ++DEREYYKHHKASPLAEIEF DTRKPITRATD
Sbjct: 121 ADVSCIGFDGGPFPEEEKNREKDRKEQEEDEREYYKHHKASPLAEIEFADTRKPITRATD 180

Query: 181 GTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF 239
           GTAYDGGGKD+I WLPEQEDTVDDSL+RATEIWKQNAMRGDPDAPQSRVLRALRGEQF
Sbjct: 181 GTAYDGGGKDVIRWLPEQEDTVDDSLRRATEIWKQNAMRGDPDAPQSRVLRALRGEQF 238

[Close]

BLAST of CmoCh17G010260 vs. ExPASy TrEMBL
Match: A0A6J1DCP1 (uncharacterized protein LOC111019128 OS=Momordica charantia OX=3673 GN=LOC111019128 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.7e-92
Identity = 180/241 (74.69%), Postives = 200/241 (82.99%), Query Frame = 0


Query: 1   MTSRLTAIASKRNWTFSLAQFQRLRRCGLT---TCRTADPSVHANDDNHPAVPSGEPEQS 60
           M SRLTAIA    W FSLAQ  RLRR GL    T RTADPSVHA DDN PAVPSGEPE+S
Sbjct: 1   MQSRLTAIAPNSKWAFSLAQLHRLRR-GLARPETGRTADPSVHAVDDNDPAVPSGEPEKS 60

Query: 61  QDNLEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHS 120
           Q+  EPD+AK+NY+R+DS +G  NGPF P KAQY SSPRLE+T V Q SKPITQQKR H 
Sbjct: 61  QEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLESTGVGQPSKPITQQKRPHG 120

Query: 121 TVLADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKPITR 180
           TV+ DVSC+GFDGGP P E+  R   R+E+++DEREYYKHHKASPLAEIEF DTRKPITR
Sbjct: 121 TVIDDVSCVGFDGGPAPEEKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITR 180

Query: 181 ATDGTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQ 239
           ATDGTAYDGGGKD+IGWLPEQ DT +DSL+R TEIWK+NA+RGDPDAPQSRVLRALRGEQ
Sbjct: 181 ATDGTAYDGGGKDVIGWLPEQVDTAEDSLRRGTEIWKRNAVRGDPDAPQSRVLRALRGEQ 240

[Close]

BLAST of CmoCh17G010260 vs. ExPASy TrEMBL
Match: A0A1S3BR22 (uncharacterized protein LOC103492778 OS=Cucumis melo OX=3656 GN=LOC103492778 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.4e-88
Identity = 183/250 (73.20%), Postives = 200/250 (80.00%), Query Frame = 0


Query: 1   MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDD--NHPAVPSGEPEQSQ 60
           M SRL AIA + NW   + QFQ LRR GLTT RTADPSVHANDD  N P+V SGEPE+SQ
Sbjct: 1   MQSRLRAIAPRSNWALWVTQFQGLRRGGLTTGRTADPSVHANDDDENDPSVLSGEPERSQ 60

Query: 61  DNLEPDSAKSNYE-RDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHS 120
           DNLEPD+AK+NYE RDD KQGDSNGPF P KAQ+ASSPRLETT V QASKPITQQKRAHS
Sbjct: 61  DNLEPDNAKANYEGRDDPKQGDSNGPFGPSKAQHASSPRLETTVVGQASKPITQQKRAHS 120

Query: 121 TVLADVSCIGFDGGPF---------PAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEF 180
             + DVSCIG  GGP            ++K  E++  E+ +D R+YYKHHKASPLAEIEF
Sbjct: 121 VAIDDVSCIGVYGGPLEEGKESRTTEMKDKEEEEEEIEEIEDNRDYYKHHKASPLAEIEF 180

Query: 181 VDTRKPITRATDGTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSR 239
           VDTRKPITRATDGTA  G GK +IGWLPEQ DTVDDSL+RATEIWKQNAMRGDPDAPQSR
Sbjct: 181 VDTRKPITRATDGTADYGDGKTVIGWLPEQVDTVDDSLRRATEIWKQNAMRGDPDAPQSR 240

[Close]

BLAST of CmoCh17G010260 vs. ExPASy TrEMBL
Match: A0A0A0K9G7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405970 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.9e-88
Identity = 181/244 (74.18%), Postives = 199/244 (81.56%), Query Frame = 0


Query: 1   MTSRLTAIASKRNWTFSLAQFQRLRRCG--LTTCRTADPSVHAN---DDNHPAVPSGEPE 60
           M S L AIA K NW F + QFQ LRR G  LTT RTADPS+HAN   DDN PAV SGEPE
Sbjct: 31  MQSTLRAIAPKSNWAFWVTQFQSLRRGGLTLTTSRTADPSLHANDDDDDNDPAVLSGEPE 90

Query: 61  QSQDNLEPDSAKSNYE-RDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKR 120
           +SQDNLEPD+AK+NY+ RDD KQGDS GPF  P AQ+ASSPRLETT V QASKPITQQKR
Sbjct: 91  RSQDNLEPDNAKANYDRRDDPKQGDSKGPFGKPTAQHASSPRLETTVVGQASKPITQQKR 150

Query: 121 AHSTVLADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKP 180
           AHS  + DVSCIG  GGP    ++NR  + KE+++D R+YYKHHKASPLAEIEF DTRKP
Sbjct: 151 AHS--IDDVSCIGVYGGPLEQGKENRTTEMKEEEEDNRDYYKHHKASPLAEIEFADTRKP 210

Query: 181 ITRATDGTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALR 239
           ITRATDGTAYDG    +IGWLPEQ DTVDDSL+RATEIWKQNAMRGDPDAPQSRVLRALR
Sbjct: 211 ITRATDGTAYDGESGTVIGWLPEQVDTVDDSLRRATEIWKQNAMRGDPDAPQSRVLRALR 270

[Close]

BLAST of CmoCh17G010260 vs. NCBI nr
Match: XP_022953997.1 (uncharacterized protein LOC111456388 [Cucurbita moschata])

HSP 1 Score: 475.3 bits (1222), Expect = 3.0e-130
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60
           MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN
Sbjct: 1   MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60

Query: 61  LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120
           LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL
Sbjct: 61  LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120

Query: 121 ADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKPITRATD 180
           ADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKPITRATD
Sbjct: 121 ADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKPITRATD 180

Query: 181 GTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF 239
           GTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF
Sbjct: 181 GTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF 238

[Close]

BLAST of CmoCh17G010260 vs. NCBI nr
Match: KAG6575793.1 (hypothetical protein SDJN03_26432, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 467.2 bits (1201), Expect = 8.3e-128
Identity = 234/238 (98.32%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60
           MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN
Sbjct: 1   MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60

Query: 61  LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120
           LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL
Sbjct: 61  LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120

Query: 121 ADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKPITRATD 180
            DVSCIGFDGGPFPAEEKNR KDRKEQ+DDEREYYKHHKASPLAEIEFVDTRKPITRATD
Sbjct: 121 DDVSCIGFDGGPFPAEEKNRGKDRKEQEDDEREYYKHHKASPLAEIEFVDTRKPITRATD 180

Query: 181 GTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF 239
           GTAYDGGGKD+IGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF
Sbjct: 181 GTAYDGGGKDVIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF 238

[Close]

BLAST of CmoCh17G010260 vs. NCBI nr
Match: XP_023548846.1 (uncharacterized protein LOC111807374 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 464.2 bits (1193), Expect = 7.0e-127
Identity = 231/238 (97.06%), Postives = 237/238 (99.58%), Query Frame = 0


Query: 1   MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60
           MTSRLTAIASKRNW+FSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN
Sbjct: 1   MTSRLTAIASKRNWSFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60

Query: 61  LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120
           LEPDSAK+NYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL
Sbjct: 61  LEPDSAKANYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120

Query: 121 ADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKPITRATD 180
           ADVSCIGFDGGPFPAEEKNREKDRKEQ++DEREYYKHHKASPLAEIEFVDTRKPITRATD
Sbjct: 121 ADVSCIGFDGGPFPAEEKNREKDRKEQEEDEREYYKHHKASPLAEIEFVDTRKPITRATD 180

Query: 181 GTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF 239
           GTAYDGGGKD+IGWLPEQEDTVDDSL+RA EIWKQNAMRGDPDAPQSRVLRALRGEQF
Sbjct: 181 GTAYDGGGKDVIGWLPEQEDTVDDSLRRAKEIWKQNAMRGDPDAPQSRVLRALRGEQF 238

[Close]

BLAST of CmoCh17G010260 vs. NCBI nr
Match: KAG7014335.1 (hypothetical protein SDJN02_24512 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 462.2 bits (1188), Expect = 2.7e-126
Identity = 232/238 (97.48%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60
           MTSRLTAIASKRNWTFSLAQFQRLRR GLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN
Sbjct: 1   MTSRLTAIASKRNWTFSLAQFQRLRRSGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60

Query: 61  LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120
           LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL
Sbjct: 61  LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120

Query: 121 ADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKPITRATD 180
           ADVSCIGFDGGPFPAEEKNREKDRKEQ++D REYYKHHKASPLAEIEFVDTRKPIT ATD
Sbjct: 121 ADVSCIGFDGGPFPAEEKNREKDRKEQEEDAREYYKHHKASPLAEIEFVDTRKPITTATD 180

Query: 181 GTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF 239
           GTAYDGGGKD+IGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF
Sbjct: 181 GTAYDGGGKDVIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF 238

[Close]

BLAST of CmoCh17G010260 vs. NCBI nr
Match: XP_022991237.1 (uncharacterized protein LOC111487953 [Cucurbita maxima])

HSP 1 Score: 450.7 bits (1158), Expect = 8.0e-123
Identity = 225/238 (94.54%), Postives = 230/238 (96.64%), Query Frame = 0


Query: 1   MTSRLTAIASKRNWTFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60
           M SRLTAIASKRNW FSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN
Sbjct: 1   MPSRLTAIASKRNWAFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDN 60

Query: 61  LEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120
           LEPD AK+NY  DDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL
Sbjct: 61  LEPDRAKANYASDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVL 120

Query: 121 ADVSCIGFDGGPFPAEEKNREKDRKEQDDDEREYYKHHKASPLAEIEFVDTRKPITRATD 180
           ADVSCIGFDGGPFP EEKNREKDRKEQ++DEREYYKHHKASPLAEIEF DTRKPITRATD
Sbjct: 121 ADVSCIGFDGGPFPEEEKNREKDRKEQEEDEREYYKHHKASPLAEIEFADTRKPITRATD 180

Query: 181 GTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDAPQSRVLRALRGEQF 239
           GTAYDGGGKD+I WLPEQEDTVDDSL+RATEIWKQNAMRGDPDAPQSRVLRALRGEQF
Sbjct: 181 GTAYDGGGKDVIRWLPEQEDTVDDSLRRATEIWKQNAMRGDPDAPQSRVLRALRGEQF 238

[Close]

BLAST of CmoCh17G010260 vs. TAIR 10
Match: AT1G02700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02140.1); Has 49 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 6; Plants - 29; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 194.9 bits (494), Expect = 7.4e-50
Identity = 123/247 (49.80%), Postives = 158/247 (63.97%), Query Frame = 0


Query: 1   MTSRLTAIAS-KRNWTFSLAQFQRLRRCGLTTCRTADPSVHA-NDDNHPAVPSGEPEQSQ 60
           M SRL A AS  R+    +AQ +RL     T+ RTADP +HA ND   PA+   +PE   
Sbjct: 3   MQSRLLAFASAARSRVRPIAQ-RRLAFGSSTSGRTADPEIHAGNDGADPAIYPRDPEGMD 62

Query: 61  DNLEPDSAKSNYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHST 120
           D   P +A      D  +      P  PPK+  A++ +LE+TPV   S+P  QQKR +ST
Sbjct: 63  DVANPKTAAEEIVDDTPRPSLEEQPLVPPKSPRATAHKLESTPVGHPSEPHFQQKRKNST 122

Query: 121 V----LADVSCIGFDGGPFPAEEKNREKDRKEQDDDE--REYYKHHKASPLAEIEFVDTR 180
                L  VSC G DG P+P +E   E+ R+ +D+ E  +E+YKHHKASPL+EIEF DTR
Sbjct: 123 ASPPSLDSVSCAGLDGSPWPRDEGEVEEQRRREDETESDQEFYKHHKASPLSEIEFADTR 182

Query: 181 KPITRATDGTAYDGGGKDMIGWLPEQEDTVDDSLQRATEIWKQNAMRGDPDA-PQSRVLR 239
           KPIT+ATDGTAY   GKD+IGWLPEQ DT ++SL +AT I+K+NA RGDP+  P SR+LR
Sbjct: 183 KPITQATDGTAYP-AGKDVIGWLPEQLDTAEESLMKATMIFKRNAERGDPETFPHSRILR 242

The following BLAST results are available for this feature:

BLAST of CmoCh17G010260 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh17G010260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPT4	1.5e-130	100.00	uncharacterized protein LOC111456388 OS=Cucurbita moschata OX=3662 GN=LOC1114563...	[more]
A0A6J1JL82	3.9e-123	94.54	uncharacterized protein LOC111487953 OS=Cucurbita maxima OX=3661 GN=LOC111487953...	[more]
A0A6J1DCP1	2.7e-92	74.69	uncharacterized protein LOC111019128 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A1S3BR22	1.4e-88	73.20	uncharacterized protein LOC103492778 OS=Cucumis melo OX=3656 GN=LOC103492778 PE=...	[more]
A0A0A0K9G7	6.9e-88	74.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405970 PE=4 SV=1	[more]

BLAST of CmoCh17G010260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953997.1	3.0e-130	100.00	uncharacterized protein LOC111456388 [Cucurbita moschata]	[more]
KAG6575793.1	8.3e-128	98.32	hypothetical protein SDJN03_26432, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023548846.1	7.0e-127	97.06	uncharacterized protein LOC111807374 [Cucurbita pepo subsp. pepo]	[more]
KAG7014335.1	2.7e-126	97.48	hypothetical protein SDJN02_24512 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022991237.1	8.0e-123	94.54	uncharacterized protein LOC111487953 [Cucurbita maxima]	[more]

BLAST of CmoCh17G010260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02700.1	7.4e-50	49.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..116
None	No IPR available	PANTHER	PTHR35985	OS07G0675200 PROTEIN	coord: 1..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G010260.1	CmoCh17G010260.1	mRNA