CmoCh17G007660 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G007660
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Dynein light chain
Location	Cmo_Chr17: 7459492 .. 7460215 (-)
RNA-Seq Expression	CmoCh17G007660
Synteny	CmoCh17G007660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAAGGCAAAGCTTTGGTACAGGATACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTCTCAAGCTCTGGATCGCTATGATGTCTTCGACTGCAAATCCATTGCTGCCCACATCAAAAAGGTTCTCTCTCTCCCTTATCTCTCTCTCTCTCTAAGATCCCACGAGTATTCCTTATAAGAGAGTGAAAACCTCTCCCTGACAGTGGACCAAAATAGACAATATCGGCTAGCGGTAGGCTTAGGCTGCTACACTCTCTCTACTCTCTCTACCCATTTGAGGTGTATGTGTAGAAGAACATGGTAGCTTGAAGAGATTGGTTTGAAAATCTCAGGCTTTGATTCCTTGTTTGGTTGTGGACTTGCAGGATTTTGACGACAGATATGGAAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAAGGCTCTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATCTTCAAAGGGAGATTTAGAGAGTTTGAATATCATTGTGGGTTGTTTGGATGCTTGATGTTCAAAATCCTTTAATGCTTTTGGTGGGTATACTATGTAAATATGAACTCATGTGAACACAGTTCTTAATCCTTTCCAAGCATTTTCACTGCCCATTTCACTTCTCTGCCAAGATTAGCTAATTCCTGGGTTCAGACAATCAATTATAGGCAATCTCCTGGT

mRNA sequence

ATGTTGGAAGGCAAAGCTTTGGTACAGGATACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTCTCAAGCTCTGGATCGCTATGATGATTTTGACGACAGATATGGAAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAAGGCTCTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATCTTCAAAGGGAGATTTAGAGAGTTTGAATATCATTGTGGGTTGTTTGGATGCTTGATGTTCAAAATCCTTTAATGCTTTTGGTGGGTATACTATGTAAATATGAACTCATGTGAACACAGTTCTTAATCCTTTCCAAGCATTTTCACTGCCCATTTCACTTCTCTGCCAAGATTAGCTAATTCCTGGGTTCAGACAATCAATTATAGGCAATCTCCTGGT

Coding sequence (CDS)

ATGTTGGAAGGCAAAGCTTTGGTACAGGATACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTCTCAAGCTCTGGATCGCTATGATGATTTTGACGACAGATATGGAAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAAGGCTCTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATCTTCAAAGGGAGATTTAGAGAGTTTGAATATCATTGTGGGTTGTTTGGATGCTTGATGTTCAAAATCCTTTAA

Protein sequence

MLEGKALVQDTDMPGKMQIQAMDAASQALDRYDDFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGRFREFEYHCGLFGCLMFKIL

Homology

[Close]

BLAST of CmoCh17G007660 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.7e-11
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGS 60
          M E KA++++ DMP  MQ  A+D A+QAL++++           +FD +Y   W C+VG 
Sbjct: 1  MSERKAVIKNADMPEDMQQDAVDCATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 61 NFGCFFTHSKGSFIYFKLETLNFLIFK 77
          NFG + TH    FIYF L  +  L+FK
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAVLLFK 87

[Close]

BLAST of CmoCh17G007660 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.6e-11
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGS 60
          M++ KA++++ DM   MQ  A+D A+QAL++Y+           +FD +Y   W C+VG 
Sbjct: 1  MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 61 NFGCFFTHSKGSFIYFKLETLNFLIFK 77
          NFG + TH    FIYF L  +  L+FK
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of CmoCh17G007660 vs. ExPASy Swiss-Prot
Match: Q24117 (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 7.8e-11
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGS 60
          M + KA++++ DM  +MQ  A+D A+QAL++Y+           +FD +Y   W C+VG 
Sbjct: 1  MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 61 NFGCFFTHSKGSFIYFKLETLNFLIFK 77
          NFG + TH    FIYF L  +  L+FK
Sbjct: 61 NFGSYVTHETRHFIYFYLGQVAILLFK 87

[Close]

BLAST of CmoCh17G007660 vs. ExPASy Swiss-Prot
Match: O96860 (Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 7.8e-11
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGS 60
          M + KA++++ DM  +MQ  A+D A+QAL++Y+           +FD +Y   W C+VG 
Sbjct: 1  MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGR 60

Query: 61 NFGCFFTHSKGSFIYFKLETLNFLIFK 77
          NFG + TH    FIYF L  +  L+FK
Sbjct: 61 NFGSYVTHETRHFIYFYLGQVAILLFK 87

[Close]

BLAST of CmoCh17G007660 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-10
Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGS 60
          M + KA++++ DM   MQ  A+D A+QA+++Y+           +FD +Y   W C+VG 
Sbjct: 1  MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 61 NFGCFFTHSKGSFIYFKLETLNFLIFK 77
          NFG + TH    FIYF L  +  L+FK
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of CmoCh17G007660 vs. ExPASy TrEMBL
Match: A0A6J1GP96 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111456205 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.0e-47
Identity = 97/110 (88.18%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 60
           MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD             DFDDRYGSGWQCVV
Sbjct: 1   MLEGKALVQDTDMPGKMQIQAMDAASQALDRYDVFDCKSIAAHIKKDFDDRYGSGWQCVV 60

Query: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGRFREFEYHCGLFGCLMFKIL 98
           GSNFGCFFTHSKGSFIYFKLETLNFLIFKGRFREFEYHCGLFGCLMFKIL
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGRFREFEYHCGLFGCLMFKIL 110

[Close]

BLAST of CmoCh17G007660 vs. ExPASy TrEMBL
Match: A0A6J1GP16 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111456205 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.9e-38
Identity = 86/110 (78.18%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 60
          MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD             DFDDRYGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYDVFDCKSIAAHIKKDFDDRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGRFREFEYHCGLFGCLMFKIL 98
          GSNFGCFFTHSKGSF           IFKGRFREFEYHCGLFGCLMFKIL
Sbjct: 61 GSNFGCFFTHSKGSF-----------IFKGRFREFEYHCGLFGCLMFKIL 99

[Close]

BLAST of CmoCh17G007660 vs. ExPASy TrEMBL
Match: A0A6J1JVQ9 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111488754 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 7.5e-33
Identity = 75/90 (83.33%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 60
          MLEGKALVQDTDMPGKMQIQAMDAAS+ALDRYD             DFD+RYGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASEALDRYDVLDCKSIAAHIKKDFDNRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 78
          GSNFGCFFTHSKGSFIYFKLETLNFLIFKG
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 90

[Close]

BLAST of CmoCh17G007660 vs. ExPASy TrEMBL
Match: A0A5A7UW48 (Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002230 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.4e-31
Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 60
          MLEGKALVQDTDMPGKMQIQAMDAAS+ALD YD             DFD++YGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 78
          GSNFGCFFTHSKGSFIYFKLETLNFLIFKG
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 90

[Close]

BLAST of CmoCh17G007660 vs. ExPASy TrEMBL
Match: A0A0A0K947 (Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_7G446940 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.4e-31
Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 60
          MLEGKALVQDTDMPGKMQIQAMDAAS+ALD YD             DFD++YGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 78
          GSNFGCFFTHSKGSFIYFKLETLNFLIFKG
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 90

[Close]

BLAST of CmoCh17G007660 vs. NCBI nr
Match: XP_022953777.1 (dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata] >XP_022953778.1 dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 196.1 bits (497), Expect = 1.4e-46
Identity = 97/110 (88.18%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 60
           MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD             DFDDRYGSGWQCVV
Sbjct: 1   MLEGKALVQDTDMPGKMQIQAMDAASQALDRYDVFDCKSIAAHIKKDFDDRYGSGWQCVV 60

Query: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGRFREFEYHCGLFGCLMFKIL 98
           GSNFGCFFTHSKGSFIYFKLETLNFLIFKGRFREFEYHCGLFGCLMFKIL
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGRFREFEYHCGLFGCLMFKIL 110

[Close]

BLAST of CmoCh17G007660 vs. NCBI nr
Match: XP_022953781.1 (dynein light chain LC6, flagellar outer arm-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 166.4 bits (420), Expect = 1.2e-37
Identity = 86/110 (78.18%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 60
          MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD             DFDDRYGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYDVFDCKSIAAHIKKDFDDRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGRFREFEYHCGLFGCLMFKIL 98
          GSNFGCFFTHSKGSF           IFKGRFREFEYHCGLFGCLMFKIL
Sbjct: 61 GSNFGCFFTHSKGSF-----------IFKGRFREFEYHCGLFGCLMFKIL 99

[Close]

BLAST of CmoCh17G007660 vs. NCBI nr
Match: KAG6575532.1 (hypothetical protein SDJN03_26171, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.5 bits (384), Expect = 1.8e-33
Identity = 77/90 (85.56%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 60
          MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD             DFDDRYGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYDVFDCKSIAAHIKKDFDDRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 78
          GSNFGCFFTHSKGSFIYFKLETLNFLIFKG
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 90

[Close]

BLAST of CmoCh17G007660 vs. NCBI nr
Match: XP_022992454.1 (dynein light chain LC6, flagellar outer arm-like [Cucurbita maxima] >XP_022992455.1 dynein light chain LC6, flagellar outer arm-like [Cucurbita maxima])

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-32
Identity = 75/90 (83.33%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 60
          MLEGKALVQDTDMPGKMQIQAMDAAS+ALDRYD             DFD+RYGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASEALDRYDVLDCKSIAAHIKKDFDNRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 78
          GSNFGCFFTHSKGSFIYFKLETLNFLIFKG
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 90

[Close]

BLAST of CmoCh17G007660 vs. NCBI nr
Match: XP_038897874.1 (dynein light chain LC6, flagellar outer arm-like [Benincasa hispida])

HSP 1 Score: 146.0 bits (367), Expect = 1.7e-31
Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 60
          MLEGKAL+QDTDMPGKMQIQAMDAAS+ALD YD             DFD+RYGSGWQCVV
Sbjct: 1  MLEGKALIQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 78
          GSNFGCFFTHSKGSFIYFKLETLNFLIFKG
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 90

[Close]

BLAST of CmoCh17G007660 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 126.7 bits (317), Expect = 1.0e-29
Identity = 63/90 (70.00%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 60
          MLEGKA+V+D+DMP KMQ+QAM  ASQALD +D             +FD+RYGSGWQCVV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 78
          GSNFGCFFTHSKG+FIYF+LETL FLIFKG
Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFKG 90

[Close]

BLAST of CmoCh17G007660 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 122.5 bits (306), Expect = 1.9e-28
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 60
          MLEGKA V++TDMP KMQ+QAM  ASQ+LD +D             +FD+RYGSGWQCVV
Sbjct: 1  MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 78
          G+NFGCFFTHSKG+FIYF L TLNFLIFKG
Sbjct: 61 GTNFGCFFTHSKGTFIYFHLGTLNFLIFKG 90

[Close]

BLAST of CmoCh17G007660 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 84.7 bits (208), Expect = 4.4e-17
Identity = 44/94 (46.81%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 60
          MLEGKA++ DTDM   M+  A+  AS+ALD +D             +FD  YGSGWQC+V
Sbjct: 1  MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGRFRE 82
          G++FG F TH  G FI+F + +L  L+FKG   E
Sbjct: 61 GTHFGSFVTHCSGCFIHFSVGSLTILLFKGSVGE 94

[Close]

BLAST of CmoCh17G007660 vs. TAIR 10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 68.6 bits (166), Expect = 3.2e-12
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCV 47
          MLEGKA+V+D+DMP KMQ+QAM  ASQALD +D             +FD+RYGSGWQCV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCV 59

[Close]

BLAST of CmoCh17G007660 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 67.4 bits (163), Expect = 7.2e-12
Identity = 36/87 (41.38%), Postives = 44/87 (50.57%), Query Frame = 0


Query: 12  DMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHS 71
           DMPG MQ  A   A   LD  +             +FD  YG  W C+VGS+FG F THS
Sbjct: 123 DMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHS 182

Query: 72  KGSFIYFKLETLNFLIFKGRFREFEYH 86
            G FIYF ++ L  L+FK + R    H
Sbjct: 183 TGCFIYFSMDKLYVLLFKTKVRPASPH 209

The following BLAST results are available for this feature:

BLAST of CmoCh17G007660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O02414	2.7e-11	40.23	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
Q22799	4.6e-11	39.08	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]
Q24117	7.8e-11	39.08	Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1...	[more]
O96860	7.8e-11	39.08	Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE...	[more]
Q3MHR3	2.3e-10	37.93	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]

BLAST of CmoCh17G007660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GP96	7.0e-47	88.18	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111456205 PE=3 SV=1	[more]
A0A6J1GP16	5.9e-38	78.18	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111456205 PE=3 SV=1	[more]
A0A6J1JVQ9	7.5e-33	83.33	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111488754 PE=3 SV=1	[more]
A0A5A7UW48	1.4e-31	81.11	Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G0...	[more]
A0A0A0K947	1.4e-31	81.11	Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_7G446940 PE=3 SV=1	[more]

BLAST of CmoCh17G007660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953777.1	1.4e-46	88.18	dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata]...	[more]
XP_022953781.1	1.2e-37	78.18	dynein light chain LC6, flagellar outer arm-like isoform X2 [Cucurbita moschata]	[more]
KAG6575532.1	1.8e-33	85.56	hypothetical protein SDJN03_26171, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022992454.1	1.6e-32	83.33	dynein light chain LC6, flagellar outer arm-like [Cucurbita maxima] >XP_02299245...	[more]
XP_038897874.1	1.7e-31	81.11	dynein light chain LC6, flagellar outer arm-like [Benincasa hispida]	[more]

BLAST of CmoCh17G007660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52240.2	1.0e-29	70.00	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	1.9e-28	67.78	Dynein light chain type 1 family protein	[more]
AT4G27360.1	4.4e-17	46.81	Dynein light chain type 1 family protein	[more]
AT1G52240.1	3.2e-12	59.32	RHO guanyl-nucleotide exchange factor 11	[more]
AT5G20110.1	7.2e-12	41.38	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..77 e-value: 3.0E-28 score: 109.9
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 5..76 e-value: 1.1E-20 score: 73.7
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..77
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 1..77 e-value: 1.2E-20 score: 75.5
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 1..76
None	No IPR available	PANTHER	PTHR11886:SF94	DYNEIN LIGHT CHAIN	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G007660.1	CmoCh17G007660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding
molecular_function	GO:0005085	guanyl-nucleotide exchange factor activity