CmoCh17G007400 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh17G007400
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionactin-related protein 8-like
LocationCmo_Chr17: 7357852 .. 7358454 (-)
RNA-Seq ExpressionCmoCh17G007400
SyntenyCmoCh17G007400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAACAATCTTCCGGTGATATCCAAAAGGCTCTGGAAATTGGTACGCGTCGCTTATTTCCTCCTCCGTAAAGGCATCTCCAAGAGCAAGCTCATTCTCGACCTCAATCTCATGATGAAGCGCGGCAAAATCGCCGGAAAAGCCATTACAAATCTCATGTTCCACCACCACTATCACGGCGGCGCCACTCCTTCCTCCTCCGCTGATCAACTCCCTATCGCCGTTGGTCCCGACGATTACGAATTCAACTGCAGCGATAGCCCCGCTTTCCCTTCTCTCCACTTCCCTGCCTTCCACAAACGCCGTCGTAACCAAAACCACACCTCCTCCTTCTTCGCGTGTGCTCACGCTCCTCCAACACTTGACGATGACGCTGCTGCCGTTAATGCCGTTAAGGCTGCCGTCGAGATTTTTAACTACCATAGCGGCGCGTCGTCTCCCTCCCTTGTCTCAGGGAGCGTCCGCCAGCTAAGGATAACGGACTCTCCGTTTCCTCTACATGACGCCAACGCTGATTCATCGGTCGATAAAGCCGCCGATGAATACATCAGCAGGTTTTACAAGGAGCTCAGGCTTCAACCCACGGCCGACGAGAACTGA

mRNA sequence

ATGGAAAACAATCTTCCGGTGATATCCAAAAGGCTCTGGAAATTGGTACGCGTCGCTTATTTCCTCCTCCGTAAAGGCATCTCCAAGAGCAAGCTCATTCTCGACCTCAATCTCATGATGAAGCGCGGCAAAATCGCCGGAAAAGCCATTACAAATCTCATGTTCCACCACCACTATCACGGCGGCGCCACTCCTTCCTCCTCCGCTGATCAACTCCCTATCGCCGTTGGTCCCGACGATTACGAATTCAACTGCAGCGATAGCCCCGCTTTCCCTTCTCTCCACTTCCCTGCCTTCCACAAACGCCGTCGTAACCAAAACCACACCTCCTCCTTCTTCGCGTGTGCTCACGCTCCTCCAACACTTGACGATGACGCTGCTGCCGTTAATGCCGTTAAGGCTGCCGTCGAGATTTTTAACTACCATAGCGGCGCGTCGTCTCCCTCCCTTGTCTCAGGGAGCGTCCGCCAGCTAAGGATAACGGACTCTCCGTTTCCTCTACATGACGCCAACGCTGATTCATCGGTCGATAAAGCCGCCGATGAATACATCAGCAGGTTTTACAAGGAGCTCAGGCTTCAACCCACGGCCGACGAGAACTGA

Coding sequence (CDS)

ATGGAAAACAATCTTCCGGTGATATCCAAAAGGCTCTGGAAATTGGTACGCGTCGCTTATTTCCTCCTCCGTAAAGGCATCTCCAAGAGCAAGCTCATTCTCGACCTCAATCTCATGATGAAGCGCGGCAAAATCGCCGGAAAAGCCATTACAAATCTCATGTTCCACCACCACTATCACGGCGGCGCCACTCCTTCCTCCTCCGCTGATCAACTCCCTATCGCCGTTGGTCCCGACGATTACGAATTCAACTGCAGCGATAGCCCCGCTTTCCCTTCTCTCCACTTCCCTGCCTTCCACAAACGCCGTCGTAACCAAAACCACACCTCCTCCTTCTTCGCGTGTGCTCACGCTCCTCCAACACTTGACGATGACGCTGCTGCCGTTAATGCCGTTAAGGCTGCCGTCGAGATTTTTAACTACCATAGCGGCGCGTCGTCTCCCTCCCTTGTCTCAGGGAGCGTCCGCCAGCTAAGGATAACGGACTCTCCGTTTCCTCTACATGACGCCAACGCTGATTCATCGGTCGATAAAGCCGCCGATGAATACATCAGCAGGTTTTACAAGGAGCTCAGGCTTCAACCCACGGCCGACGAGAACTGA

Protein sequence

MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYHGGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPPTLDDDAAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAADEYISRFYKELRLQPTADEN
Homology
BLAST of CmoCh17G007400 vs. ExPASy TrEMBL
Match: A0A6J1GPL9 (uncharacterized protein LOC111456334 OS=Cucurbita moschata OX=3662 GN=LOC111456334 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.0e-108
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0

Query: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH 60
           MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH
Sbjct: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH 60

Query: 61  GGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPP 120
           GGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPP
Sbjct: 61  GGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPP 120

Query: 121 TLDDDAAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAA 180
           TLDDDAAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAA
Sbjct: 121 TLDDDAAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAA 180

Query: 181 DEYISRFYKELRLQPTADEN 201
           DEYISRFYKELRLQPTADEN
Sbjct: 181 DEYISRFYKELRLQPTADEN 200

BLAST of CmoCh17G007400 vs. ExPASy TrEMBL
Match: A0A6J1JMV1 (uncharacterized protein LOC111488328 OS=Cucurbita maxima OX=3661 GN=LOC111488328 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.1e-102
Identity = 193/200 (96.50%), Postives = 194/200 (97.00%), Query Frame = 0

Query: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH 60
           MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAI NLMFHHHYH
Sbjct: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAIANLMFHHHYH 60

Query: 61  GGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPP 120
           GGATPSSSADQLP+AVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHT SFFACAHAP 
Sbjct: 61  GGATPSSSADQLPVAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHT-SFFACAHAPQ 120

Query: 121 TLDDDAAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAA 180
           TLDDDAA   AVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAA
Sbjct: 121 TLDDDAA---AVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAA 180

Query: 181 DEYISRFYKELRLQPTADEN 201
           DEYISRFYKELRLQPTADEN
Sbjct: 181 DEYISRFYKELRLQPTADEN 196

BLAST of CmoCh17G007400 vs. ExPASy TrEMBL
Match: A0A6J1KDI8 (uncharacterized protein LOC111494650 OS=Cucurbita maxima OX=3661 GN=LOC111494650 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.0e-73
Identity = 155/217 (71.43%), Postives = 171/217 (78.80%), Query Frame = 0

Query: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH 60
           MENNLP+++K++W LVRVAYFLLRKGISKSKL+LDLNLM KRGK+AGKAI+NLMFHHHYH
Sbjct: 1   MENNLPIMAKKVWNLVRVAYFLLRKGISKSKLMLDLNLMTKRGKLAGKAISNLMFHHHYH 60

Query: 61  GGATPSS----SADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACA 120
             A+PSS    SA QLP  +G D+YEF+CS+SPAFP+ H     KRRRNQNH +SFFACA
Sbjct: 61  AAASPSSSPPTSAGQLPFPIGADEYEFSCSNSPAFPAFH---VGKRRRNQNH-NSFFACA 120

Query: 121 HAPPTLDDD-AAAVNAVKAAVEIFNYHSGASSPSLVSGS------------VRQLRITDS 180
           HAP TLDDD AAAVNAV A VEI N HSGASS   V  S            VRQLRITDS
Sbjct: 121 HAPDTLDDDAAAAVNAVNAVVEILNNHSGASSTPPVPASPALPGFGRTPRRVRQLRITDS 180

Query: 181 PFPLHDANADSSVDKAADEYISRFYKELRLQPTADEN 201
           PFPL DANAD  VDKAADE+ISRFYKELRLQ TADEN
Sbjct: 181 PFPLQDANADPLVDKAADEFISRFYKELRLQKTADEN 213

BLAST of CmoCh17G007400 vs. ExPASy TrEMBL
Match: A0A6J1HJS6 (uncharacterized protein LOC111464220 OS=Cucurbita moschata OX=3662 GN=LOC111464220 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.3e-68
Identity = 145/210 (69.05%), Postives = 162/210 (77.14%), Query Frame = 0

Query: 8   ISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYHGGA---- 67
           ++K++W LVRV YFLLRKGISKSKL+LDLNLM KRGK+AGKAI+NLMFHHHYH  A    
Sbjct: 1   MAKKVWNLVRVVYFLLRKGISKSKLMLDLNLMTKRGKLAGKAISNLMFHHHYHAAAASPS 60

Query: 68  -TPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPPTL 127
            +P +SA QLP  VG D+YEF+CS+SPAFP+ H     KRRRNQNH +SFFACAHAP TL
Sbjct: 61  SSPPTSAGQLPFPVGADEYEFSCSNSPAFPAFH---VGKRRRNQNH-NSFFACAHAPDTL 120

Query: 128 DDDAAAVNAVKAAVEIFNYHSGASSPSLVSGS------------VRQLRITDSPFPLHDA 187
           DDDAAAVNAV A VEI N H+GASS   +  S            VRQLRITDSPFPL DA
Sbjct: 121 DDDAAAVNAVNAVVEILNNHTGASSTPPIPASPALPGFGPTPRRVRQLRITDSPFPLQDA 180

Query: 188 NADSSVDKAADEYISRFYKELRLQPTADEN 201
           NAD  VDKAADE+ISRFYKELRLQ TADEN
Sbjct: 181 NADPLVDKAADEFISRFYKELRLQKTADEN 206

BLAST of CmoCh17G007400 vs. ExPASy TrEMBL
Match: A0A1S4E3M3 (actin-related protein 8-like OS=Cucumis melo OX=3656 GN=LOC103500787 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 4.1e-57
Identity = 127/204 (62.25%), Postives = 153/204 (75.00%), Query Frame = 0

Query: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKL-ILDLNLMMKRGKIAGKAITNLMFHHHY 60
           ME+N+PVI+K++W LVRVAYFL+RKGISKSK+ +LDLNLMMKRGKIAGKAI+NLMF HHY
Sbjct: 1   MESNVPVIAKKVWNLVRVAYFLIRKGISKSKVNMLDLNLMMKRGKIAGKAISNLMFQHHY 60

Query: 61  HGGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAP 120
                  + A QLP  V PDDYEF+CS++P++   H+  F KRRRN  + +SFFACAHAP
Sbjct: 61  -AQHHQQNVAHQLPFDVAPDDYEFSCSNTPSY---HY--FGKRRRNNQNNNSFFACAHAP 120

Query: 121 PTLDDDAAAVNAVKAAVEIFNYHSGASS---PSLVSGSVRQLRITDSPFPLHDANADSSV 180
            TLDDD   +NA+KA V+I N ++  ++   P      VRQLRITDSPFPL D NAD  V
Sbjct: 121 QTLDDDLPTLNALKAVVDILNNNNNNNNNNPPFSPPIPVRQLRITDSPFPLQDPNADPLV 180

Query: 181 DKAADEYISRFYKELRLQPTADEN 201
           DKAADE+ISRFYKEL LQ T   N
Sbjct: 181 DKAADEFISRFYKELSLQKTPHHN 198

BLAST of CmoCh17G007400 vs. NCBI nr
Match: XP_022953927.1 (uncharacterized protein LOC111456334 [Cucurbita moschata])

HSP 1 Score: 402.5 bits (1033), Expect = 2.1e-108
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0

Query: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH 60
           MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH
Sbjct: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH 60

Query: 61  GGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPP 120
           GGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPP
Sbjct: 61  GGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPP 120

Query: 121 TLDDDAAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAA 180
           TLDDDAAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAA
Sbjct: 121 TLDDDAAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAA 180

Query: 181 DEYISRFYKELRLQPTADEN 201
           DEYISRFYKELRLQPTADEN
Sbjct: 181 DEYISRFYKELRLQPTADEN 200

BLAST of CmoCh17G007400 vs. NCBI nr
Match: XP_023548437.1 (uncharacterized protein LOC111807092 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-106
Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 0

Query: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH 60
           MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH
Sbjct: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH 60

Query: 61  GGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPP 120
           GGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPP
Sbjct: 61  GGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPP 120

Query: 121 TLDDDAAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAA 180
           TLDDDAAAVNAVKAAVEIFN+HSGASSPSLV G VRQLRITDSPFPLHDANADSSVDKAA
Sbjct: 121 TLDDDAAAVNAVKAAVEIFNFHSGASSPSLVLGRVRQLRITDSPFPLHDANADSSVDKAA 180

Query: 181 DEYISRFYKELRLQPTADEN 201
           DEYISRFYKELRLQPTADEN
Sbjct: 181 DEYISRFYKELRLQPTADEN 200

BLAST of CmoCh17G007400 vs. NCBI nr
Match: KAG7014051.1 (hypothetical protein SDJN02_24223, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-106
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0

Query: 1   MENNLPVISKRLWKLVRVAYFLLRKG-ISKSKLILDLNLMMKRGKIAGKAITNLMFHHHY 60
           MENNLPVISKRLWKLVRVAYFLLRKG ISKSKLILDLNLMMKRGKIAGKAITNLMFHHHY
Sbjct: 1   MENNLPVISKRLWKLVRVAYFLLRKGIISKSKLILDLNLMMKRGKIAGKAITNLMFHHHY 60

Query: 61  HGGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAP 120
           HGGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAP
Sbjct: 61  HGGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAP 120

Query: 121 PTLDDDAAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKA 180
           PTLDDD+AAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKA
Sbjct: 121 PTLDDDSAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKA 180

Query: 181 ADEYISRFYKELRLQPTADEN 201
           ADEYISRFYKELRLQPTADEN
Sbjct: 181 ADEYISRFYKELRLQPTADEN 201

BLAST of CmoCh17G007400 vs. NCBI nr
Match: KAG6575512.1 (hypothetical protein SDJN03_26151, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 393.7 bits (1010), Expect = 9.8e-106
Identity = 198/201 (98.51%), Postives = 199/201 (99.00%), Query Frame = 0

Query: 1   MENNLPVISKRLWKLVRVAYFLLRKG-ISKSKLILDLNLMMKRGKIAGKAITNLMFHHHY 60
           MENNLPVISKRLWKLVRVAYFLLRKG ISKSKLILDLNLMMKRGKIAGKAITNLMFHHHY
Sbjct: 1   MENNLPVISKRLWKLVRVAYFLLRKGIISKSKLILDLNLMMKRGKIAGKAITNLMFHHHY 60

Query: 61  HGGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAP 120
           HGGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAP
Sbjct: 61  HGGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAP 120

Query: 121 PTLDDDAAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKA 180
           PTLDDD+AAVNAVKAAVEIFNYHS ASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKA
Sbjct: 121 PTLDDDSAAVNAVKAAVEIFNYHSRASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKA 180

Query: 181 ADEYISRFYKELRLQPTADEN 201
           ADEYISRFYKELRLQPTADEN
Sbjct: 181 ADEYISRFYKELRLQPTADEN 201

BLAST of CmoCh17G007400 vs. NCBI nr
Match: XP_022991792.1 (uncharacterized protein LOC111488328 [Cucurbita maxima])

HSP 1 Score: 380.6 bits (976), Expect = 8.5e-102
Identity = 193/200 (96.50%), Postives = 194/200 (97.00%), Query Frame = 0

Query: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH 60
           MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAI NLMFHHHYH
Sbjct: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAIANLMFHHHYH 60

Query: 61  GGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPP 120
           GGATPSSSADQLP+AVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHT SFFACAHAP 
Sbjct: 61  GGATPSSSADQLPVAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHT-SFFACAHAPQ 120

Query: 121 TLDDDAAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAA 180
           TLDDDAA   AVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAA
Sbjct: 121 TLDDDAA---AVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANADSSVDKAA 180

Query: 181 DEYISRFYKELRLQPTADEN 201
           DEYISRFYKELRLQPTADEN
Sbjct: 181 DEYISRFYKELRLQPTADEN 196

BLAST of CmoCh17G007400 vs. TAIR 10
Match: AT1G52140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 3.0e-28
Identity = 85/218 (38.99%), Postives = 112/218 (51.38%), Query Frame = 0

Query: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFH--HH 60
           M+ N+P ISK+LW +VR   +++RKG+SK+KLI D N  +KRGK       NLMFH    
Sbjct: 1   MDQNVP-ISKKLWNIVRFLLYMIRKGVSKNKLIADFNATLKRGK-------NLMFHQRRR 60

Query: 61  YHGGATPSSSADQL-PIAVGPDDYEFNCSDSP--AFPSLHFPAFHKRRRNQNHTSSFFAC 120
            H G+T S++ +     A    +YEF+CS++P  +FP  +     K+  N     + F C
Sbjct: 61  VHAGSTASAALNATSATASSRQEYEFSCSNTPNYSFPFSNMAFMRKKSHN-----NLFTC 120

Query: 121 AHAPPTLDDDAAAVNAV----------------KAAVEIFNYHSGASSPSLVSGSVRQLR 180
              P TLDDD AA  AV                   V +  Y  G     L    VR LR
Sbjct: 121 GQTPQTLDDDVAAARAVLELLNGVGEKGNVTPADLTVALSPYFPGFGQTPL----VRPLR 180

Query: 181 ITDSPFPLHDANAD---SSVDKAADEYISRFYKELRLQ 195
           +TDSPFPL   N D     VDKAAD++I +FYK L  Q
Sbjct: 181 VTDSPFPLTPENGDVANGHVDKAADDFIKKFYKNLNQQ 201

BLAST of CmoCh17G007400 vs. TAIR 10
Match: AT3G16330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 121.3 bits (303), Expect = 8.7e-28
Identity = 84/217 (38.71%), Postives = 117/217 (53.92%), Query Frame = 0

Query: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH 60
           ME N+  ISK+L  +VR   ++L KGISK KL+ D N  +KRGK       NLMFH+   
Sbjct: 1   MEKNIS-ISKKLGNIVRFVLYMLHKGISKQKLLADFNATLKRGK-------NLMFHNRRR 60

Query: 61  GGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPP 120
               P S+    P     ++YEF+CSD+P +    FP      + ++H +S F+C  APP
Sbjct: 61  ---VPGSAVASHP----QNEYEFSCSDTPNYT---FPFNMAAFKKKSHHNSLFSCGQAPP 120

Query: 121 TLDDDAAAVNAVKAAVEIFN----YHSGASSPSL-----------------VSGSVRQLR 180
           TLDDD +   AV   +E+ N    +  G+++P+                   + SVR LR
Sbjct: 121 TLDDDTSVSRAV---LELLNSGGDHDQGSNTPAFSIEALTALSPYLPGFGRSTSSVRPLR 180

Query: 181 ITDSPFPLHDAN--ADSSVDKAADEYISRFYKELRLQ 195
           +TDSPFPL +    A+  VDKAADE+I +FYK L  Q
Sbjct: 181 VTDSPFPLREEGDVANGHVDKAADEFIKKFYKNLYQQ 196

BLAST of CmoCh17G007400 vs. TAIR 10
Match: AT4G29110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to chitin; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21
Identity = 79/203 (38.92%), Postives = 104/203 (51.23%), Query Frame = 0

Query: 1   MENNLPVISKRLWKLVRVAYFLLRKGISKSKLILDLNLMMKRGKIAGKAITNLMFHHHYH 60
           ME N  V +KRLWK+VR+ + +L+ G  K+KL+LDLNLM+KRG    KAITNL       
Sbjct: 14  MEQNAQVAAKRLWKVVRIVFCVLKTGTVKNKLMLDLNLMLKRG---NKAITNLRRRSSST 73

Query: 61  GGATPSSSADQLPIAVGPDDYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSFFACAHAPP 120
           G    SSS+          DY+             F    KR+R            H   
Sbjct: 74  GSHDVSSSS-------RVRDYD------------PFAFISKRKRR----------VHGGY 133

Query: 121 TLDDDAAAVNAVKAAVEIFNYH--------SGASSPSLVSGSVRQLRITDSPFPLHD-AN 180
             ++DA    AVK   E+   +        S   SP ++S +VRQLR+TDSPFPL D  +
Sbjct: 134 DNEEDAVEA-AVKKVFELLGENDKKTVATESARESPLIMSPAVRQLRVTDSPFPLDDGGD 183

Query: 181 ADSSVDKAADEYISRFYKELRLQ 195
            D  VDKAA+E+I +FYK L+LQ
Sbjct: 194 HDHVVDKAAEEFIKKFYKNLKLQ 183

BLAST of CmoCh17G007400 vs. TAIR 10
Match: AT4G32860.1 (unknown protein; Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 3.2e-06
Identity = 54/202 (26.73%), Postives = 84/202 (41.58%), Query Frame = 0

Query: 1   MENNLPVISKRLWKLVRVAYFLLRK--GISKSKLI--LDLNLMMKRGKIAGKAITNLMFH 60
           ME    V +K+L  L ++  F ++K    S+ KL+  LD +L+ KRGKI  K++   +  
Sbjct: 7   MEVCSTVTTKKLSSLAKLILFTIQKVSDASRHKLLTTLDPHLLAKRGKILRKSLNEAVST 66

Query: 61  HHYHGGATPSSSADQLPIAVGPD----DYEFNCSDSPAFPSLHFPAFHKRRRNQNHTSSF 120
            H      PS   D     + P     +YEF+CS +P   S        RR N +H    
Sbjct: 67  SHSRITCRPSDHQDVRSSFISPVPLQLEYEFSCSSTPPRRSYATTVSKGRRSNGSHNRPL 126

Query: 121 FACAHAPPTLDDDAAAVNAVKAAVEIFNYHSGASSPSLVSGSVRQLRITDSPFPLHDANA 180
                    +  +       K    I++ H  A+    V+ S   +              
Sbjct: 127 INKRQRQAYIRYNTLP----KVRDSIWDRHVAAAVFPDVASSTGTME------------- 186

Query: 181 DSSVDKAADEYISRFYKELRLQ 195
              VD+AA+E+I  FY++LRLQ
Sbjct: 187 SCHVDRAAEEFIQSFYRQLRLQ 191

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GPL91.0e-108100.00uncharacterized protein LOC111456334 OS=Cucurbita moschata OX=3662 GN=LOC1114563... [more]
A0A6J1JMV14.1e-10296.50uncharacterized protein LOC111488328 OS=Cucurbita maxima OX=3661 GN=LOC111488328... [more]
A0A6J1KDI84.0e-7371.43uncharacterized protein LOC111494650 OS=Cucurbita maxima OX=3661 GN=LOC111494650... [more]
A0A6J1HJS62.3e-6869.05uncharacterized protein LOC111464220 OS=Cucurbita moschata OX=3662 GN=LOC1114642... [more]
A0A1S4E3M34.1e-5762.25actin-related protein 8-like OS=Cucumis melo OX=3656 GN=LOC103500787 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022953927.12.1e-108100.00uncharacterized protein LOC111456334 [Cucurbita moschata][more]
XP_023548437.11.2e-10698.50uncharacterized protein LOC111807092 [Cucurbita pepo subsp. pepo][more]
KAG7014051.11.2e-10699.00hypothetical protein SDJN02_24223, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6575512.19.8e-10698.51hypothetical protein SDJN03_26151, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022991792.18.5e-10296.50uncharacterized protein LOC111488328 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT1G52140.13.0e-2838.99unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G16330.18.7e-2838.71unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G29110.11.2e-2138.92unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
AT4G32860.13.2e-0626.73unknown protein; Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 174..194
e-value: 3.6E-6
score: 26.4
NoneNo IPR availablePANTHERPTHR33265:SF26AVR9/CF-9 RAPIDLY ELICITED PROTEINcoord: 1..196
NoneNo IPR availablePANTHERPTHR33265AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATEDcoord: 1..196

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G007400.1CmoCh17G007400.1mRNA