CmoCh17G007140 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G007140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ESCRT-related protein CHMP1B-like
Location	Cmo_Chr17: 7187560 .. 7190819 (+)
RNA-Seq Expression	CmoCh17G007140
Synteny	CmoCh17G007140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGATAATAGTGAATATTTTTGTTCCTTCTCCCCAATGTTGGTTTCACAGCTGTAATGGCATGCTTAGACATGTACAACTCCGACCATAAGTCCCTCCACCACCGTGCTCCGGCCAGCCCTCGAATCTCCTTCTCAAGCGACTTCGTGGACATCCAGCAGTCCCTCAAACGCCAAGAGCAACGCTCCTGTGCTGCCCCGGGCCCCGTCTCCTCCTCTGATTTCGAATTCTCCGTCTCCAACTACTCCATGATGACAGCCGACGAACTCTTCTTCGAGGGACGCCTTCTCCCCTTCAAGGACTCCCACAGGGCTGCCACTACTCTTAGAGATGAACTTCTGGTCGAGGAAGAGGAAGAGGAAGATGAGGAGGAGAACGATGTTTCCCAGCGCCCTTCGAGGGGCAGCTGGAAGGGGTTTCTAGGCTTGAAAAAGTCCCAGAATGCCTCCAAGAAAGCGTCCGGTGGCAAAAGGTCGTTGGGTTGGTCTCCCTCACCTAGTACCACCGCAAACTCCTCCCAGGTAAAGAAAACACTTATTAAGATGATATTGTCACCTTTAAGCATAAACTCTTCCCTAAATTAGCCAATGTAAGACTTTCATCCAACAATGTTGATTGATATTTTCAGGTACAAAACGAAGGAGGATCGAGTTGCAAAGACGTGGAGATTGAGCTCTAGAGAAAGGGAGAAGCTTAGTTTTTTTTTTTAATAAATAAATTGTAGCTAAGTGTTAAGTTGTGGAGTTGATTAATGTTAAGAAAGACGTAGCGTTTGAAAGGATTGTTGAGTAGAGTCCTTTGGAATCAAATATTAAAGCATGGCAATTTCATAAAATTGTATCCTTAAACAGCGGAAGTCAAAAGAGAAATAAATATTTGATTAAGGTGAGGCTGAATGCGAGGGTTTCAATGCAAACTTTTACAATATTAATGTACACAGCTAAGCCACGATTGTTGGTATCATTTAAAAAATAACAACAACACACACACACTCTCTCACACAATTTCAAGGTAGATCTGCAGATTTTTCCATTTACTATATTTAATTTTTTTTTTTTTTTTTTTTTTTTTAAGTAAAGAGAATTTGTCCATTCTTTTATCTCCACTGAATTAATACAAAATACTTTTAAATTTAATTTTTTTAAAAAAAATTAATGACAGCTTTAAAAAAAATTAAATGATTTCAAAAATATCGTAAAAATACCTTTAAATTTATTTAAAAACTTTAAAAAAAATATATACATATATATATAATATTAATTCTTTTTTTAAATAAAAAATACATCTACATCTATTCCCACATTTAAAAAATATTCACAAATTTTATGAAATTTTGAGATAATCTATGAAATTTAGATAGACGTTTTTTGACAATATATTAATATATTTTTTATAGATGTTTACTTTTAAAATTTGTATTTTTTAAACAAAGTAATAATAGTAAATATATTTTTTAGCGATATAAATAAAACTTTTAAAAATTAAAAAGAACATTAAAATATTTTTGTAAACAAATTATTAGCTAATTAAGTTTGTTATATTTAAAAAAAAAATAGTTTAAGGGTTTTATTCAAAATTTTGAAAGATTTAAGTATATATTTTTTTTTAGATAAATTAGAGCTTTTTTTTATTATTAATTTACCCTTCTATTTTACTTACTAGGTAAATATCCTAATTAAATTAGGCTAGTATTCACGTCTATGTAAATATTTTAATTAATTTAGATGTGAGTTGAAATGACAAGAGTTGAGATAGTAACGATGTTTGGAAAAAAATAGACTCGGCGACATTGAGAATTGAGAAATGACATTCATGAAGTGACTTTGTGATCGCCCTTTGAACACCGGAGCACGTGAACTGAAGGTGGTGACATTCATTTGGCCCTATTGGGCACAATCACATGTTCTAATCTTTCGAGCTACAAGCCCTGTCAATTGCTTTGAGTTTCAATCTTGCGACCGTACTTTCCAAGTGAGGATAAAAAAGCTCTTCCTTTACATACTATTCATTGAAAAATGATCCATCTTTTTTCTCTGTTTATCGATTTTGTGCAAATCTTCTTTTTCGAAGGGTCTACATATAAAATATCATATCTATAATAACTGCTTGCCACCTATGCTTCATCGTCGATTCCAACTACCATTCATGTACGATCCACACTAGACCTGATATTTAGTCAAACATAACTGCCGCTTAACATTATTATTATTTTTTATTAAAATATTTAAACAGAGTGACAATAAAACTTATCATTTAAATATTTTTAAATTAATTGAGAAAAATAGTACAAGACAAACCTGAAAAACTAGTATTATTTACTATTTATTTTATTGTTGTAATTTTATATAATTTAAATTAATTATTTTATTTAAATAGAGTTCAAAATCATAATAAAAAATTAAATTAATTATTTTATTTAAACAAAGTTCAAAATCAGAATAAAAAATTAAATTAATTCACGCGTTTAAATAGTTAGGGTTTTAAAGGTGGCATCCAAAAACTCCTTCGCCACTAGTCAAGCGATTCTTCAACAGAAAGTTCATCGTTTCTCAGGAAGATTTATTTTCCCCAAATCCAGTTCTTCTCGAGCCCTAGCATCTTTCATCAGGCTCCCCATTAAATTCCACCGCATTTGGGGGATCTCCGATCATGGGAAACACCGAGAAATTGTTGAATCAGATCATGGAATTGAAATTTACTTCGAAGTCGCTGCAACGCCAAGCCAGGAAGTGCGAGAAGGAAGAGAAAGCTGAGAAGCTCAAGATCAAGAAGGCTATGGAGAAAGGAAATGTTGATGGAGCTCGAATTTACGCGGAGAACGCGATCCGTAAACGAACAGAACAGATGAACTATCTCCGCCTGTCCTCGAGGCTTGATGCTGTTGTGGCTCGGCTCGACACACAGGCCAAGATGTCCACGATTAACAAGTCCATGGCGTCGATCGTTAAGTCGTTGGAATCTTCTTTGGCGACTGGAAATTTGCAGAAGATGTCCGAAAATATGGACCAATTTGAGAAGCAGTTTGTGAATATGGAGGTTCAGGCCGAGTTTATGGAAAATGCAATGGCCGGATCTACGTCGCTCTCGACTCCGGAAGGAGAAGTCAACAGCTTGATGCAGCAGGTCGCGGATGATTACGGTCTGGAAGTCTCCGTCGGGCTACCGCAGCCGGCTTCACATGCAATGCCAACGAAGGAGACCGAGAAAGTTGACGAGGACGACTTAACGAGGCGCCTTGCAGAGCTCAAGGCCAGAGGTTAA

mRNA sequence

GAGATAATAGTGAATATTTTTGTTCCTTCTCCCCAATGTTGGTTTCACAGCTGTAATGGCATGCTTAGACATGTACAACTCCGACCATAAGTCCCTCCACCACCGTGCTCCGGCCAGCCCTCGAATCTCCTTCTCAAGCGACTTCGTGGACATCCAGCAGTCCCTCAAACGCCAAGAGCAACGCTCCTGTGCTGCCCCGGGCCCCGTCTCCTCCTCTGATTTCGAATTCTCCGTCTCCAACTACTCCATGATGACAGCCGACGAACTCTTCTTCGAGGGACGCCTTCTCCCCTTCAAGGACTCCCACAGGGCTGCCACTACTCTTAGAGATGAACTTCTGGTCGAGGAAGAGGAAGAGGAAGATGAGGAGGAGAACGATGTTTCCCAGCGCCCTTCGAGGGGCAGCTGGAAGGGGTTTCTAGGCTTGAAAAAGTCCCAGAATGCCTCCAAGAAAGCGTCCGGTGGCAAAAGGTCGTTGGGTTGGTCTCCCTCACCTAGTACCACCGCAAACTCCTCCCAGGTACAAAACGAAGGAGGATCGAGTTGCAAAGACCATCTTTCATCAGGCTCCCCATTAAATTCCACCGCATTTGGGGGATCTCCGATCATGGGAAACACCGAGAAATTGTTGAATCAGATCATGGAATTGAAATTTACTTCGAAGTCGCTGCAACGCCAAGCCAGGAAGTGCGAGAAGGAAGAGAAAGCTGAGAAGCTCAAGATCAAGAAGGCTATGGAGAAAGGAAATGTTGATGGAGCTCGAATTTACGCGGAGAACGCGATCCGTAAACGAACAGAACAGATGAACTATCTCCGCCTGTCCTCGAGGCTTGATGCTGTTGTGGCTCGGCTCGACACACAGGCCAAGATGTCCACGATTAACAAGTCCATGGCGTCGATCGTTAAGTCGTTGGAATCTTCTTTGGCGACTGGAAATTTGCAGAAGATGTCCGAAAATATGGACCAATTTGAGAAGCAGTTTGTGAATATGGAGGTTCAGGCCGAGTTTATGGAAAATGCAATGGCCGGATCTACGTCGCTCTCGACTCCGGAAGGAGAAGTCAACAGCTTGATGCAGCAGGTCGCGGATGATTACGGTCTGGAAGTCTCCGTCGGGCTACCGCAGCCGGCTTCACATGCAATGCCAACGAAGGAGACCGAGAAAGTTGACGAGGACGACTTAACGAGGCGCCTTGCAGAGCTCAAGGCCAGAGGTTAA

Coding sequence (CDS)

ATGGCATGCTTAGACATGTACAACTCCGACCATAAGTCCCTCCACCACCGTGCTCCGGCCAGCCCTCGAATCTCCTTCTCAAGCGACTTCGTGGACATCCAGCAGTCCCTCAAACGCCAAGAGCAACGCTCCTGTGCTGCCCCGGGCCCCGTCTCCTCCTCTGATTTCGAATTCTCCGTCTCCAACTACTCCATGATGACAGCCGACGAACTCTTCTTCGAGGGACGCCTTCTCCCCTTCAAGGACTCCCACAGGGCTGCCACTACTCTTAGAGATGAACTTCTGGTCGAGGAAGAGGAAGAGGAAGATGAGGAGGAGAACGATGTTTCCCAGCGCCCTTCGAGGGGCAGCTGGAAGGGGTTTCTAGGCTTGAAAAAGTCCCAGAATGCCTCCAAGAAAGCGTCCGGTGGCAAAAGGTCGTTGGGTTGGTCTCCCTCACCTAGTACCACCGCAAACTCCTCCCAGGTACAAAACGAAGGAGGATCGAGTTGCAAAGACCATCTTTCATCAGGCTCCCCATTAAATTCCACCGCATTTGGGGGATCTCCGATCATGGGAAACACCGAGAAATTGTTGAATCAGATCATGGAATTGAAATTTACTTCGAAGTCGCTGCAACGCCAAGCCAGGAAGTGCGAGAAGGAAGAGAAAGCTGAGAAGCTCAAGATCAAGAAGGCTATGGAGAAAGGAAATGTTGATGGAGCTCGAATTTACGCGGAGAACGCGATCCGTAAACGAACAGAACAGATGAACTATCTCCGCCTGTCCTCGAGGCTTGATGCTGTTGTGGCTCGGCTCGACACACAGGCCAAGATGTCCACGATTAACAAGTCCATGGCGTCGATCGTTAAGTCGTTGGAATCTTCTTTGGCGACTGGAAATTTGCAGAAGATGTCCGAAAATATGGACCAATTTGAGAAGCAGTTTGTGAATATGGAGGTTCAGGCCGAGTTTATGGAAAATGCAATGGCCGGATCTACGTCGCTCTCGACTCCGGAAGGAGAAGTCAACAGCTTGATGCAGCAGGTCGCGGATGATTACGGTCTGGAAGTCTCCGTCGGGCTACCGCAGCCGGCTTCACATGCAATGCCAACGAAGGAGACCGAGAAAGTTGACGAGGACGACTTAACGAGGCGCCTTGCAGAGCTCAAGGCCAGAGGTTAA

Protein sequence

MACLDMYNSDHKSLHHRAPASPRISFSSDFVDIQQSLKRQEQRSCAAPGPVSSSDFEFSVSNYSMMTADELFFEGRLLPFKDSHRAATTLRDELLVEEEEEEDEEENDVSQRPSRGSWKGFLGLKKSQNASKKASGGKRSLGWSPSPSTTANSSQVQNEGGSSCKDHLSSGSPLNSTAFGGSPIMGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQFEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMPTKETEKVDEDDLTRRLAELKARG

Homology

[Close]

BLAST of CmoCh17G007140 vs. ExPASy Swiss-Prot
Match: Q9SSM4 (ESCRT-related protein CHMP1B OS=Arabidopsis thaliana OX=3702 GN=CHMP1B PE=1 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.9e-92
Identity = 182/203 (89.66%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNT+KL+NQI +LKFTSKSLQRQ+RKCEKEEKAEKLK+KKA+EKGN+DGARIYAENAIR
Sbjct: 1   MGNTDKLMNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KR+EQMNYLRL+SRLDAVVARLDTQAKM+TI KSM +IVKSLESSLATGNLQKMSE MD 
Sbjct: 61  KRSEQMNYLRLASRLDAVVARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDS 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HA+P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           TK  EKVDEDDL+RRLAELKARG
Sbjct: 181 TKTEEKVDEDDLSRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. ExPASy Swiss-Prot
Match: Q8LE58 (ESCRT-related protein CHMP1A OS=Arabidopsis thaliana OX=3702 GN=CHMP1A PE=1 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 5.5e-92
Identity = 181/203 (89.16%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNT+KL+NQI ELKFTSKSLQRQARKCEKEE++EKLK+KKA+EKGN+DGARIYAENAIR
Sbjct: 1   MGNTDKLMNQIFELKFTSKSLQRQARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KR+EQMNYLRLSSRLDAVVARLDTQAKM+TI KSM +IVKSLESSL TGNLQKMSE MD 
Sbjct: 61  KRSEQMNYLRLSSRLDAVVARLDTQAKMATITKSMTNIVKSLESSLTTGNLQKMSETMDS 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFM+NAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HA+P
Sbjct: 121 FEKQFVNMEVQAEFMDNAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           TK  EKV+EDDLTRRLAELKARG
Sbjct: 181 TKTEEKVEEDDLTRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. ExPASy Swiss-Prot
Match: Q84VG1 (ESCRT-related protein CHMP1 OS=Oryza sativa subsp. japonica OX=39947 GN=CHMP1 PE=2 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.5e-84
Identity = 174/205 (84.88%), Postives = 188/205 (91.71%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGN EKL+ QI +LKFTSKSLQRQARKCEKEEK +KLK+KKA+EKGN+DGARIYAENAIR
Sbjct: 1   MGNPEKLMTQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KRTE MNYLRL+SRLDAVVARLDTQAKM  I KSMA+IVKSL+S+LATGNLQKMSE MD 
Sbjct: 61  KRTEHMNYLRLASRLDAVVARLDTQAKMQVIGKSMANIVKSLDSALATGNLQKMSETMDN 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FE+QFVNMEVQAEFME AMAGSTSLSTPE EVNSLMQQVADDYGLEVSVGLPQ A+HA+P
Sbjct: 121 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQAAAHAIP 180

Query: 365 -TKETEK-VDEDDLTRRLAELKARG 388
             KE EK VDEDDL+RRLAELKARG
Sbjct: 181 AAKEKEKAVDEDDLSRRLAELKARG 205

[Close]

BLAST of CmoCh17G007140 vs. ExPASy Swiss-Prot
Match: O96552 (Charged multivesicular body protein 1 OS=Dictyostelium discoideum OX=44689 GN=chmp1 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.3e-44
Identity = 93/194 (47.94%), Postives = 152/194 (78.35%), Query Frame = 0


Query: 193 NQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIRKRTEQMNY 252
           NQ+ +LKFTSK L++Q++K E+ EKA+K+K+KKA+E+GN+DGARIYA+NAIR++ + +NY
Sbjct: 3   NQLFQLKFTSKQLEKQSKKSEQSEKAQKIKLKKAIEQGNMDGARIYAQNAIREKNQSLNY 62

Query: 253 LRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQFEKQFVNM 312
           LRL+SR+DAV +R++T  +M ++  SMA+IVKS+E S+   +L+K+++ MDQFE+QF ++
Sbjct: 63  LRLASRIDAVASRVETAIRMKSVTGSMANIVKSMEKSMRNMDLEKITQVMDQFERQFEDL 122

Query: 313 EVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMPTKETEKVD 372
           +VQ+ ++ENAM  +T+LSTP  +V+ L+ QVAD++GL V + +      + P+++ ++ +
Sbjct: 123 DVQSVYVENAMNQTTTLSTPADQVDLLISQVADEHGLNVGMQM-----GSAPSEKVQQGE 182

Query: 373 EDDLTRRLAELKAR 387
            D+LT RL  LK +
Sbjct: 183 TDELTERLNRLKQK 191

[Close]

BLAST of CmoCh17G007140 vs. ExPASy Swiss-Prot
Match: Q5E994 (Charged multivesicular body protein 1b OS=Bos taurus OX=9913 GN=CHMP1B PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.1e-42
Identity = 95/200 (47.50%), Postives = 150/200 (75.00%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           M N EK    +  LKF +K L R A+KC+KEEKAEK KIKKA++KGN++ ARI+AENAIR
Sbjct: 1   MSNMEK---HLFNLKFAAKELGRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           ++ + +N+LR+S+R+DAV AR+ T   M  + KSMA +VKS++++L T NL+K+S  MD+
Sbjct: 61  QKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDK 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FE QF  ++VQ + ME+ M+ +T+L+TP+G+V+ L+Q++AD+ GL++++ LPQ  + ++ 
Sbjct: 121 FEHQFETLDVQTQQMEDTMSSTTTLTTPQGQVDMLLQEMADEAGLDLNMELPQGQTGSVG 180

Query: 365 TKETEKVDEDDLTRRLAELK 385
           T      ++D+L++RLA L+
Sbjct: 181 T-SVASAEQDELSQRLARLR 196

[Close]

BLAST of CmoCh17G007140 vs. ExPASy TrEMBL
Match: A0A6J1GS64 (ESCRT-related protein CHMP1B-like OS=Cucurbita moschata OX=3662 GN=LOC111456618 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 2.2e-99
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           TKETEKVDEDDLTRRLAELKARG
Sbjct: 181 TKETEKVDEDDLTRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. ExPASy TrEMBL
Match: A0A6J1JPQ3 (ESCRT-related protein CHMP1B-like OS=Cucurbita maxima OX=3661 GN=LOC111488721 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-98
Identity = 201/203 (99.01%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASH++P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHSVP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           TKETEKVDEDDLTRRLAELKARG
Sbjct: 181 TKETEKVDEDDLTRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. ExPASy TrEMBL
Match: A0A6J1CS80 (ESCRT-related protein CHMP1B OS=Momordica charantia OX=3673 GN=LOC111014278 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 1.6e-97
Identity = 199/203 (98.03%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KRTEQMNYLRLSSRLDAVVARLDTQAKM+TINKSMASIVKSLESSLATGNLQKMSE MDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMTTINKSMASIVKSLESSLATGNLQKMSETMDQ 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHA+P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAVP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           T+ETEKVDEDDLTRRLAELKARG
Sbjct: 181 TRETEKVDEDDLTRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. ExPASy TrEMBL
Match: A0A5A7V0Y1 (ESCRT-related protein CHMP1B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00700 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 3.5e-97
Identity = 198/203 (97.54%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEK+EKLKIKKAMEKGNVDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKSEKLKIKKAMEKGNVDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KRTEQMNYLRLSSRLDAVVARLDTQAKM+TINKSMASIVKSLES+LATGNLQKMSE MDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMTTINKSMASIVKSLESTLATGNLQKMSETMDQ 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHA+P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAVP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           TKETEKVDEDDLTRRLAELKARG
Sbjct: 181 TKETEKVDEDDLTRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. ExPASy TrEMBL
Match: A0A0A0K779 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452000 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 3.5e-97
Identity = 198/203 (97.54%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEK+EKLKIKKAMEKGNVDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKSEKLKIKKAMEKGNVDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KRTEQMNYLRLSSRLDAVVARLDTQAKM+TINKSMASIVKSLES+LATGNLQKMSE MDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMTTINKSMASIVKSLESTLATGNLQKMSETMDQ 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHA+P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAVP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           TKETEKVDEDDLTRRLAELKARG
Sbjct: 181 TKETEKVDEDDLTRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. NCBI nr
Match: XP_022954345.1 (ESCRT-related protein CHMP1B-like [Cucurbita moschata] >XP_023549216.1 ESCRT-related protein CHMP1B-like [Cucurbita pepo subsp. pepo] >KAG6575490.1 ESCRT-related protein CHMP1A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014033.1 ESCRT-related protein CHMP1A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 372.5 bits (955), Expect = 4.5e-99
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           TKETEKVDEDDLTRRLAELKARG
Sbjct: 181 TKETEKVDEDDLTRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. NCBI nr
Match: XP_022992402.1 (ESCRT-related protein CHMP1B-like [Cucurbita maxima])

HSP 1 Score: 369.8 bits (948), Expect = 2.9e-98
Identity = 201/203 (99.01%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASH++P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHSVP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           TKETEKVDEDDLTRRLAELKARG
Sbjct: 181 TKETEKVDEDDLTRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. NCBI nr
Match: XP_022144640.1 (ESCRT-related protein CHMP1B [Momordica charantia])

HSP 1 Score: 366.3 bits (939), Expect = 3.2e-97
Identity = 199/203 (98.03%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KRTEQMNYLRLSSRLDAVVARLDTQAKM+TINKSMASIVKSLESSLATGNLQKMSE MDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMTTINKSMASIVKSLESSLATGNLQKMSETMDQ 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHA+P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAVP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           T+ETEKVDEDDLTRRLAELKARG
Sbjct: 181 TRETEKVDEDDLTRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. NCBI nr
Match: XP_004141672.1 (ESCRT-related protein CHMP1B [Cucumis sativus] >XP_008462374.1 PREDICTED: ESCRT-related protein CHMP1B [Cucumis melo] >KAA0059449.1 ESCRT-related protein CHMP1B [Cucumis melo var. makuwa] >KGN45545.1 hypothetical protein Csa_015849 [Cucumis sativus] >TYK03875.1 ESCRT-related protein CHMP1B [Cucumis melo var. makuwa])

HSP 1 Score: 365.2 bits (936), Expect = 7.2e-97
Identity = 198/203 (97.54%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEK+EKLKIKKAMEKGNVDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKSEKLKIKKAMEKGNVDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KRTEQMNYLRLSSRLDAVVARLDTQAKM+TINKSMASIVKSLES+LATGNLQKMSE MDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMTTINKSMASIVKSLESTLATGNLQKMSETMDQ 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHA+P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAVP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           TKETEKVDEDDLTRRLAELKARG
Sbjct: 181 TKETEKVDEDDLTRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. NCBI nr
Match: XP_038896979.1 (ESCRT-related protein CHMP1B [Benincasa hispida])

HSP 1 Score: 364.0 bits (933), Expect = 1.6e-96
Identity = 198/203 (97.54%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEK+EKLKIKKAMEKGNVDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKSEKLKIKKAMEKGNVDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KRTEQMNYLRLSSRLDAVVARLDTQAKM+TINKSMASIVKSLESSLATGNLQKMSE MDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMTTINKSMASIVKSLESSLATGNLQKMSETMDQ 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVN LMQQVADDYGLEVSVGLPQPASHA+P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNILMQQVADDYGLEVSVGLPQPASHAVP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           TKETEKVDEDDLTRRLAELKARG
Sbjct: 181 TKETEKVDEDDLTRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. TAIR 10
Match: AT1G73030.1 (SNF7 family protein )

HSP 1 Score: 340.9 bits (873), Expect = 1.4e-93
Identity = 182/203 (89.66%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNT+KL+NQI +LKFTSKSLQRQ+RKCEKEEKAEKLK+KKA+EKGN+DGARIYAENAIR
Sbjct: 1   MGNTDKLMNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KR+EQMNYLRL+SRLDAVVARLDTQAKM+TI KSM +IVKSLESSLATGNLQKMSE MD 
Sbjct: 61  KRSEQMNYLRLASRLDAVVARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDS 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HA+P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           TK  EKVDEDDL+RRLAELKARG
Sbjct: 181 TKTEEKVDEDDLSRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. TAIR 10
Match: AT1G17730.1 (vacuolar protein sorting 46.1 )

HSP 1 Score: 339.3 bits (869), Expect = 3.9e-93
Identity = 181/203 (89.16%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 185 MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR 244
           MGNT+KL+NQI ELKFTSKSLQRQARKCEKEE++EKLK+KKA+EKGN+DGARIYAENAIR
Sbjct: 1   MGNTDKLMNQIFELKFTSKSLQRQARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 245 KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ 304
           KR+EQMNYLRLSSRLDAVVARLDTQAKM+TI KSM +IVKSLESSL TGNLQKMSE MD 
Sbjct: 61  KRSEQMNYLRLSSRLDAVVARLDTQAKMATITKSMTNIVKSLESSLTTGNLQKMSETMDS 120

Query: 305 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP 364
           FEKQFVNMEVQAEFM+NAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HA+P
Sbjct: 121 FEKQFVNMEVQAEFMDNAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 180

Query: 365 TKETEKVDEDDLTRRLAELKARG 388
           TK  EKV+EDDLTRRLAELKARG
Sbjct: 181 TKTEEKVEEDDLTRRLAELKARG 203

[Close]

BLAST of CmoCh17G007140 vs. TAIR 10
Match: AT5G66800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 109.4 bits (272), Expect = 6.6e-24
Identity = 71/150 (47.33%), Postives = 94/150 (62.67%), Query Frame = 0


Query: 1   MACLDMYNSDHKSLHHRAPASPRISFSSDFVDIQQSLKRQEQRSCAAPGPVSSS----DF 60
           MACL+MYNS+        P SPRISFS+DFV+I+    +  + S  +    SSS    +F
Sbjct: 1   MACLEMYNSNGGG---GTPMSPRISFSNDFVEIRPETTKTTRSSPLSKQEGSSSSFSDNF 60

Query: 61  EFSVSNYSMMTADELFFEGRLLPFKDSHRAATTLRDELLVEEEEEEDEEE--NDVSQRP- 120
           EFSVSNY+MM ADELF +G+LLPFK++++   TLR+ELLVEE+EEE   +  N  S +P 
Sbjct: 61  EFSVSNYTMMPADELFSKGKLLPFKETNQVQRTLREELLVEEDEEEGPRDATNIFSLKPP 120

Query: 121 -----------SRGSWKGFLGLKKSQNASK 133
                      S+G WKG LGLK++   SK
Sbjct: 121 IFSSSSSSSSSSKGRWKGLLGLKRAHVGSK 147

[Close]

BLAST of CmoCh17G007140 vs. TAIR 10
Match: AT3G50640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66800.1); Has 67 Blast hits to 67 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 2.8e-14
Identity = 54/144 (37.50%), Postives = 83/144 (57.64%), Query Frame = 0


Query: 1   MACLDMYNSDHKSLHHRAPASPRISFSSDFVDIQQSLKRQEQRSCAAPGPVS--SSDFEF 60
           MA L+M+NS +         + RISFS++FV+I+      +  +  +    S  S+DF F
Sbjct: 1   MARLEMHNSMN--------GAARISFSNEFVEIRSEKSNAKSNNINSRSSFSMPSADFAF 60

Query: 61  SVSNYSMMTADELFFEGRLLPFKDSHRAATTLRDELLVEEEEEEDEEENDVSQRP----- 120
           SV++YSM+ ADE+F +G++LPFK++     TL +ELL EEE     + N  S RP     
Sbjct: 61  SVTDYSMIPADEIFLKGKILPFKETSHVHRTLGEELLTEEEGSM-VDGNTFSLRPILLSS 120

Query: 121 ----SRGSWKGFLGLKKSQNASKK 134
               ++G+W+  LGLK++   SKK
Sbjct: 121 SSFSTKGTWRELLGLKRTHVRSKK 135

[Close]

BLAST of CmoCh17G007140 vs. TAIR 10
Match: AT4G34419.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19200.1). )

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-13
Identity = 51/123 (41.46%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 15  HHRAPASPRISFSSDFVDIQQSLKRQEQRSCAAPGPVSSSDFEFSVSNYSMMTADELFFE 74
           +H + A PRISFSS F   +  + + ++       PVSS DFEF V N+SM TADE+FF+
Sbjct: 11  YHGSYAEPRISFSSGFAATKHEMIKYKE------APVSSDDFEFGVENFSMTTADEIFFD 70

Query: 75  GRLLPFKDSHRAATTLRDELLVEEEEEEDEEENDVSQRPSRGSWKGFLGLK--KSQNASK 134
           G +LP K+     TT R   L EE  EED +      + S G W+  LGL   +S+   K
Sbjct: 71  GMILPLKE--EVNTTKRMSTLREELSEEDGDSPRSKSKGSSGWWRERLGLAFVRSKKDHK 125

Query: 135 KAS 136
           K+S
Sbjct: 131 KSS 125

The following BLAST results are available for this feature:

BLAST of CmoCh17G007140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSM4	1.9e-92	89.66	ESCRT-related protein CHMP1B OS=Arabidopsis thaliana OX=3702 GN=CHMP1B PE=1 SV=1	[more]
Q8LE58	5.5e-92	89.16	ESCRT-related protein CHMP1A OS=Arabidopsis thaliana OX=3702 GN=CHMP1A PE=1 SV=1	[more]
Q84VG1	2.5e-84	84.88	ESCRT-related protein CHMP1 OS=Oryza sativa subsp. japonica OX=39947 GN=CHMP1 PE...	[more]
O96552	7.3e-44	47.94	Charged multivesicular body protein 1 OS=Dictyostelium discoideum OX=44689 GN=ch...	[more]
Q5E994	1.1e-42	47.50	Charged multivesicular body protein 1b OS=Bos taurus OX=9913 GN=CHMP1B PE=2 SV=1	[more]

BLAST of CmoCh17G007140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GS64	2.2e-99	100.00	ESCRT-related protein CHMP1B-like OS=Cucurbita moschata OX=3662 GN=LOC111456618 ...	[more]
A0A6J1JPQ3	1.4e-98	99.01	ESCRT-related protein CHMP1B-like OS=Cucurbita maxima OX=3661 GN=LOC111488721 PE...	[more]
A0A6J1CS80	1.6e-97	98.03	ESCRT-related protein CHMP1B OS=Momordica charantia OX=3673 GN=LOC111014278 PE=4...	[more]
A0A5A7V0Y1	3.5e-97	97.54	ESCRT-related protein CHMP1B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0K779	3.5e-97	97.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452000 PE=4 SV=1	[more]

BLAST of CmoCh17G007140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954345.1	4.5e-99	100.00	ESCRT-related protein CHMP1B-like [Cucurbita moschata] >XP_023549216.1 ESCRT-rel...	[more]
XP_022992402.1	2.9e-98	99.01	ESCRT-related protein CHMP1B-like [Cucurbita maxima]	[more]
XP_022144640.1	3.2e-97	98.03	ESCRT-related protein CHMP1B [Momordica charantia]	[more]
XP_004141672.1	7.2e-97	97.54	ESCRT-related protein CHMP1B [Cucumis sativus] >XP_008462374.1 PREDICTED: ESCRT-...	[more]
XP_038896979.1	1.6e-96	97.54	ESCRT-related protein CHMP1B [Benincasa hispida]	[more]

BLAST of CmoCh17G007140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73030.1	1.4e-93	89.66	SNF7 family protein	[more]
AT1G17730.1	3.9e-93	89.16	vacuolar protein sorting 46.1	[more]
AT5G66800.1	6.6e-24	47.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G50640.1	2.8e-14	37.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G34419.1	2.4e-13	41.46	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 366..387
None	No IPR available	COILS	Coil	Coil	coord: 87..107
None	No IPR available	COILS	Coil	Coil	coord: 195..229
None	No IPR available	COILS	Coil	Coil	coord: 295..322
None	No IPR available	GENE3D	6.10.140.1230		coord: 187..357 e-value: 7.4E-37 score: 128.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..375
None	No IPR available	PANTHER	PTHR10476:SF57	ESCRT-RELATED PROTEIN CHMP1A-RELATED	coord: 189..387
None	No IPR available	PANTHER	PTHR10476	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 189..387
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 195..360 e-value: 1.9E-9 score: 37.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G007140.1	CmoCh17G007140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032509	endosome transport via multivesicular body sorting pathway
biological_process	GO:0045324	late endosome to vacuole transport
biological_process	GO:0015031	protein transport
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0000815	ESCRT III complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005771	multivesicular body