CmoCh17G006500 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAAGCTTACAATGATTGCTCGTGTTACTGATGGTCTTCCTCTAGCAGAGGGACTGGATGATGGCCGTGATATGCAAGATGCAGAATTCTACAAGCAGCAAGTGAAGGCTCTGTTTAAGAACTTATCAAGAGGTCAAAATGAGGCCTCAAGAATGTCTATCGAGACAGGCCCATATGTTTTTCAGTATCCATACGTGATTGGCCTTTTACATTTAACTTATCGTATTCATTGGCAGTCTAGTTTGCTGTGTTTTGAATTTTTGTATCTGCATGTCCTTGATGTCATAGGGTATATTTTACTAAATAAATTAGGAAAGAGCTTTGCTGTTTGCTCCTCAGTGTTTACACCCCATTCTGATTTGTTGTGGCATGTGAGAGGCTAAAACGAAAATAAGGTTTTCTTTATTTCTGTTTGAACCTTGTTGTGGAAAAGAAACACGAATGGTAGTTAAACTGACCCTGGGGCCTGGACAAACTAAATTTATCCTGTCATTTTGACAGTAGCTTGCTGAAAAAGTTTTGGGTTTTGCAGACGAATGAGGTTGATATTGAATGTGAAAACTTATTTGACTTTACCACTTGGGTTCAATGTGTAGAGCAATCAACATATGAATGTCTTTTGTTAAGGCTTTGGAAATTATGGTTCATCACATTAAACTGTTTAGAAGATTGTTAGTTCAGAATTATGTTCTTGACAGACGGTATTTTACCTTGACGAGTTTTTAGCTATATAATTGAAGGAAGGGTCTGTTATTTGACTATGTGCGATCGCGCGTATCCAAAGAAACTTGCCTTTCAATACCTTGAAGACCTGAAGAATGAATTTGAACGTGTCAATGGGGCTCAAATCGAAACCGCTGCTAGGCCTTATGCGTTCATTAAATTTGGTATGCATTACTTGGACTTGTATAAATAATTCCCATGCAATTTGAACCTTTAAACTTATTTACTTTCCTTTTGCCCTTGATTCCCACCTCCACCTCCTTTATGTTGAACAGATACATACATACAGAAGACCAAGAAGCTGTACCAGGATACACGGACTCAACGTAATATTGCAAAGTTGAATGATGAACTTTACGAAGTCCACCAAATAATGACTCGCAATGTTCAGGAAGTTCTTGGCGTTGGTGAAAAGTTAGACCGTAAGATTTTCCTTTTCCTTTTATTTTCTAATTTTATTAAAGTGTGGTCATGTATTATCGTATAGTAAAATGTATGTGATAAAGCATTATGGTTCCTTTGTTTTCTGACAATGTGAGTTGTTCAACTACCATTACAAACTAAACCACATTGTTCCCAGTTTCTAGGTGTATGAGGATCTTTGCTATTTGAAATGATTAGCATGATTACATTAATTTATGTTGGGAGAGATAAATTGCCCTACGGCCTTCTTGAAGGGGTTTGCAGAATCATGATTCAGCAGTGTCAAAGATGATAACTTTCTAATTTTATACTATTTAAATTTTGCAGAGGTCAGTCAAATGTCAAGTAGGTTGACATCTGAATCCCGCATATATGCTGACAAGGCCAGAGATTTAAACCGACAGGTTAGTCATATTATTTGATTTGCTTTAAATTCTGTCGAAGTTGAATGATTGCCTTCAGAATGTGAACTTTTGCATGATTTCGATGTAAGACAAGGCTTAACTTTTGCATGATTTTGATGTTGCTCATGAAGCTATTTTCTGATAACATGAATCATTGAAGGTTGTACTGGTATAGTTGTTTAGAAAATAAGAAACAGAGAATACCATTGAACCAAAAAGCGTATACTGCTTAAAAGCCAGAGGGAACAGGAATCCTTTGCCTAGGAGGCTAGAAAAACTCCCCTCCAACCTACACTAACCAAAAAGCTGCAGTTATGAAAATCCTTACGTTTGGCACTCCAAGTGGAAGCTGTCTGCTGTCAATTTAGCCAAAAACCATCAAGACTTCAACAAACATCATTAAAAATCCCATTATCTCTCTAACCAAATGGACCAGAAACTGGGTTTGCTTTCTGCAATCTTCTAGCATCGCTTTAAGCCACCCTCTCGAAAGCAATGCTGTGAGCCAGTCTTCAATATCATCTTGGTTCTTGGAAACAGTAGTTGAGCCTAAAAATGTTACAGAGGAAGAGGTTTCATATTTGAATTCTATTTTGAGTGTTAGACACCTTAGATCAAATTTGAGGCTCAACTTTTTTAGCGAACTTACCCTCCTAATTGAGCTTTGATAATGGGATATTCAGGCTGGTGGCCTTGGAGTTGAACTCGAAATTACCTGCTTCACTAGAAAAGAGACCAATTCTTCAAGATTTCAAACCTCTCACTTCCAACGCCTAACCTTATAGGACGAAGCTTGATGGATGGTATCTTATGGAGTTTATTCCATTGCAAATATGCATAAGAAATAAGGAACTTTTATTCTATTTCACTTGGTGCCTTATAATCTGACCCGTGGTGGTTGAAAGTAGTATAGATACTCTGAATAAATAAATAAATATCAATGATTTATCCTGTTGTGAGGTCTCGTATACAGACCGACATCTTCAACAGAAACTTATTGTAAAATTTTCCAGTTTCACGAGCATTTGGACTGTAATCCAAAATTGTGCATGATTTGTTGTTAACTGACCTCATAAACATTGTTAGTATATCTCTTAGGATGCTTTCTACATGGAAAGTTCGTTGAAGACCTCATTTTAATTGACAGTTCTAATGCTTAATTTTTCATTTCTTAAAAATTTTGAACGCAGGCTTTAATTCGGAAGTGGGCTCCCGTTGCTATCGTGTTCGGAGTCGTATTCCTCCTATTCTGGTTCAAATCAAAGCTCTGGTGATTTGGTTGCCGTTCCACATAAATCCTTGACTCATTTCCAGGCTTCTCTTGCTTTTTACCTTTGGCTTACAATCGGCTCAGACATCAGAGACGTGAAACTGGGCTAGAGGTGACTTCTAGATTTACTTGATGGCTAAGATGGTAACTGAAAAATAGTGTGTTTTTGGTTATATAGCTCCAAGTGGGGGCGGTGCTGCCTGTACAACTGTAAGAGCGATGTTAAACCTAGTAATCCAGATTGAGTAGAGAAAAACATGTTTATTCACATTTTAGTTACCTCCTCCCAATATACTACATTTTTTGTTCTTTATACATTAAAAAATACCGTTATATTTATTATATTAGTCTTTCTTTGACATAATTCAGGTTCAGAACTTAA ATGGTGAAGCTTACAATGATTGCTCGTGTTACTGATGGTCTTCCTCTAGCAGAGGGACTGGATGATGGCCGTGATATGCAAGATGCAGAATTCTACAAGCAGCAAGTGAAGGCTCTGTTTAAGAACTTATCAAGAGGTCAAAATGAGGCCTCAAGAATGTCTATCGAGACAGGCCCATATGTTTTTCACTATATAATTGAAGGAAGGGTCTGTTATTTGACTATGTGCGATCGCGCGTATCCAAAGAAACTTGCCTTTCAATACCTTGAAGACCTGAAGAATGAATTTGAACGTGTCAATGGGGCTCAAATCGAAACCGCTGCTAGGCCTTATGCGTTCATTAAATTTGATACATACATACAGAAGACCAAGAAGCTGTACCAGGATACACGGACTCAACGTAATATTGCAAAGTTGAATGATGAACTTTACGAAGTCCACCAAATAATGACTCGCAATGTTCAGGAAGTTCTTGGCGTTGGTGAAAAGTTAGACCAGGTCAGTCAAATGTCAAGTAGGTTGACATCTGAATCCCGCATATATGCTGACAAGGCCAGAGATTTAAACCGACAGGCTTTAATTCGGAAGTGGGCTCCCGTTGCTATCGTGTTCGGAGTCGTATTCCTCCTATTCTGGTTCAAATCAAAGCTCTGGTTCAGAACTTAA ATGGTGAAGCTTACAATGATTGCTCGTGTTACTGATGGTCTTCCTCTAGCAGAGGGACTGGATGATGGCCGTGATATGCAAGATGCAGAATTCTACAAGCAGCAAGTGAAGGCTCTGTTTAAGAACTTATCAAGAGGTCAAAATGAGGCCTCAAGAATGTCTATCGAGACAGGCCCATATGTTTTTCACTATATAATTGAAGGAAGGGTCTGTTATTTGACTATGTGCGATCGCGCGTATCCAAAGAAACTTGCCTTTCAATACCTTGAAGACCTGAAGAATGAATTTGAACGTGTCAATGGGGCTCAAATCGAAACCGCTGCTAGGCCTTATGCGTTCATTAAATTTGATACATACATACAGAAGACCAAGAAGCTGTACCAGGATACACGGACTCAACGTAATATTGCAAAGTTGAATGATGAACTTTACGAAGTCCACCAAATAATGACTCGCAATGTTCAGGAAGTTCTTGGCGTTGGTGAAAAGTTAGACCAGGTCAGTCAAATGTCAAGTAGGTTGACATCTGAATCCCGCATATATGCTGACAAGGCCAGAGATTTAAACCGACAGGCTTTAATTCGGAAGTGGGCTCCCGTTGCTATCGTGTTCGGAGTCGTATTCCTCCTATTCTGGTTCAAATCAAAGCTCTGGTTCAGAACTTAA MVKLTMIARVTDGLPLAEGLDDGRDMQDAEFYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSKLWFRT Homology
BLAST of CmoCh17G006500 vs. ExPASy Swiss-Prot
Match: Q94AU2 (25.3 kDa vesicle transport protein OS=Arabidopsis thaliana OX=3702 GN=SEC22 PE=2 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 8.6e-114 Identity = 201/218 (92.20%), Postives = 213/218 (97.71%), Query Frame = 0
BLAST of CmoCh17G006500 vs. ExPASy Swiss-Prot
Match: Q5ZJW4 (Vesicle-trafficking protein SEC22b OS=Gallus gallus OX=9031 GN=SEC22B PE=2 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 4.3e-49 Identity = 102/216 (47.22%), Postives = 147/216 (68.06%), Query Frame = 0
BLAST of CmoCh17G006500 vs. ExPASy Swiss-Prot
Match: O08547 (Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3) HSP 1 Score: 193.7 bits (491), Expect = 2.1e-48 Identity = 101/216 (46.76%), Postives = 146/216 (67.59%), Query Frame = 0
BLAST of CmoCh17G006500 vs. ExPASy Swiss-Prot
Match: Q5RAI9 (Vesicle-trafficking protein SEC22b OS=Pongo abelii OX=9601 GN=SEC22B PE=2 SV=3) HSP 1 Score: 193.7 bits (491), Expect = 2.1e-48 Identity = 101/216 (46.76%), Postives = 146/216 (67.59%), Query Frame = 0
BLAST of CmoCh17G006500 vs. ExPASy Swiss-Prot
Match: Q4KM74 (Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 SV=3) HSP 1 Score: 193.7 bits (491), Expect = 2.1e-48 Identity = 101/216 (46.76%), Postives = 146/216 (67.59%), Query Frame = 0
BLAST of CmoCh17G006500 vs. ExPASy TrEMBL
Match: A0A6J1GQL3 (25.3 kDa vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111456568 PE=3 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 1.6e-118 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CmoCh17G006500 vs. ExPASy TrEMBL
Match: A0A1S3CGL3 (25.3 kDa vesicle transport protein OS=Cucumis melo OX=3656 GN=LOC103500668 PE=3 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 3.5e-118 Identity = 216/218 (99.08%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CmoCh17G006500 vs. ExPASy TrEMBL
Match: A0A0A0K6X0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448760 PE=3 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 3.5e-118 Identity = 216/218 (99.08%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CmoCh17G006500 vs. ExPASy TrEMBL
Match: A0A6J1D9F3 (25.3 kDa vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111018579 PE=3 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 4.6e-118 Identity = 216/218 (99.08%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CmoCh17G006500 vs. ExPASy TrEMBL
Match: A0A6J1JTF4 (25.3 kDa vesicle transport protein-like OS=Cucurbita maxima OX=3661 GN=LOC111488712 PE=3 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 5.9e-118 Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 0
BLAST of CmoCh17G006500 vs. NCBI nr
Match: XP_022954257.1 (25.3 kDa vesicle transport protein [Cucurbita moschata] >XP_022954258.1 25.3 kDa vesicle transport protein [Cucurbita moschata] >XP_023549166.1 25.3 kDa vesicle transport protein-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023549167.1 25.3 kDa vesicle transport protein-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG7013968.1 25.3 kDa vesicle transport protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 435.3 bits (1118), Expect = 3.2e-118 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CmoCh17G006500 vs. NCBI nr
Match: XP_023549165.1 (25.3 kDa vesicle transport protein-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 435.3 bits (1118), Expect = 3.2e-118 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CmoCh17G006500 vs. NCBI nr
Match: XP_038898947.1 (25.3 kDa vesicle transport protein [Benincasa hispida]) HSP 1 Score: 434.5 bits (1116), Expect = 5.5e-118 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CmoCh17G006500 vs. NCBI nr
Match: XP_008462269.1 (PREDICTED: 25.3 kDa vesicle transport protein [Cucumis melo] >XP_008462270.1 PREDICTED: 25.3 kDa vesicle transport protein [Cucumis melo] >XP_011659609.1 25.3 kDa vesicle transport protein [Cucumis sativus] >KGN45465.1 hypothetical protein Csa_015771 [Cucumis sativus]) HSP 1 Score: 434.1 bits (1115), Expect = 7.2e-118 Identity = 216/218 (99.08%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CmoCh17G006500 vs. NCBI nr
Match: XP_022150420.1 (25.3 kDa vesicle transport protein [Momordica charantia] >XP_022150428.1 25.3 kDa vesicle transport protein [Momordica charantia]) HSP 1 Score: 433.7 bits (1114), Expect = 9.4e-118 Identity = 216/218 (99.08%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CmoCh17G006500 vs. TAIR 10
Match: AT1G11890.1 (Synaptobrevin family protein ) HSP 1 Score: 411.0 bits (1055), Expect = 6.1e-115 Identity = 201/218 (92.20%), Postives = 213/218 (97.71%), Query Frame = 0
BLAST of CmoCh17G006500 vs. TAIR 10
Match: AT5G52270.1 (SNARE-like superfamily protein ) HSP 1 Score: 115.9 bits (289), Expect = 4.0e-26 Identity = 58/161 (36.02%), Postives = 100/161 (62.11%), Query Frame = 0
BLAST of CmoCh17G006500 vs. TAIR 10
Match: AT5G58180.1 (Synaptobrevin family protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07 Identity = 38/161 (23.60%), Postives = 79/161 (49.07%), Query Frame = 0
BLAST of CmoCh17G006500 vs. TAIR 10
Match: AT5G58180.2 (Synaptobrevin family protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07 Identity = 38/161 (23.60%), Postives = 79/161 (49.07%), Query Frame = 0
BLAST of CmoCh17G006500 vs. TAIR 10
Match: AT5G58060.1 (SNARE-like superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.4e-07 Identity = 36/144 (25.00%), Postives = 67/144 (46.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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