CmoCh17G005890 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G005890
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Rhomboid protein
Location	Cmo_Chr17: 6254340 .. 6255155 (+)
RNA-Seq Expression	CmoCh17G005890
Synteny	CmoCh17G005890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGGCCTTTATTTTACGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATTCAGAAGAAAAACATTGGATATTCACATGTGGGGCTGAGTTATGAAACTGCCATGGAAGGACACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATAAGTGTTATTCATCTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGTCTTAGAACAGCTTGGGCATATGGGCTTAGGTGTTGCATATTATCTCCACTACACTCTTGTTCTGGTCATACTCTCTGGTATCCTAGTGTTAGGAATGTACCATCTCTTAATTCAAAAGTTTAAGCTCGAATACTTTCGCCGAGTTACCGCTGTTGGATATTCTTGTGTTGTTTTCGGGTGGATGACTATACTTTCTATGAAGCAACCATCTTCTAAGTTGGAACTCTTTGGCTTCCTTTCGCTACCCATCAGCTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTCCCTCAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCACGGAATGAATAACTTCTGGGCACTCTCCATGCTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACGACTTCGACTTTCTGGAGATTGAATCTGTGACGGACCCTTCATTGCCGTCTGTTCGATTTCTTTCAGCTGGAAATGGTAGGACCTTGCAGATGAATGCATTGCCAACGGGAGATGTCGAGATTGTATGA

mRNA sequence

ATGGGGAGGCCTTTATTTTACGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATTCAGAAGAAAAACATTGGATATTCACATGTGGGGCTGAGTTATGAAACTGCCATGGAAGGACACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATAAGTGTTATTCATCTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGTCTTAGAACAGCTTGGGCATATGGGCTTAGGTGTTGCATATTATCTCCACTACACTCTTGTTCTGGTCATACTCTCTGGTATCCTAGTGTTAGGAATGTACCATCTCTTAATTCAAAAGTTTAAGCTCGAATACTTTCGCCGAGTTACCGCTGTTGGATATTCTTGTGTTGTTTTCGGGTGGATGACTATACTTTCTATGAAGCAACCATCTTCTAAGTTGGAACTCTTTGGCTTCCTTTCGCTACCCATCAGCTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTCCCTCAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCACGGAATGAATAACTTCTGGGCACTCTCCATGCTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACGACTTCGACTTTCTGGAGATTGAATCTGTGACGGACCCTTCATTGCCGTCTGTTCGATTTCTTTCAGCTGGAAATGGTAGGACCTTGCAGATGAATGCATTGCCAACGGGAGATGTCGAGATTGTATGA

Coding sequence (CDS)

ATGGGGAGGCCTTTATTTTACGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATTCAGAAGAAAAACATTGGATATTCACATGTGGGGCTGAGTTATGAAACTGCCATGGAAGGACACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATAAGTGTTATTCATCTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGTCTTAGAACAGCTTGGGCATATGGGCTTAGGTGTTGCATATTATCTCCACTACACTCTTGTTCTGGTCATACTCTCTGGTATCCTAGTGTTAGGAATGTACCATCTCTTAATTCAAAAGTTTAAGCTCGAATACTTTCGCCGAGTTACCGCTGTTGGATATTCTTGTGTTGTTTTCGGGTGGATGACTATACTTTCTATGAAGCAACCATCTTCTAAGTTGGAACTCTTTGGCTTCCTTTCGCTACCCATCAGCTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTCCCTCAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCACGGAATGAATAACTTCTGGGCACTCTCCATGCTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACGACTTCGACTTTCTGGAGATTGAATCTGTGACGGACCCTTCATTGCCGTCTGTTCGATTTCTTTCAGCTGGAAATGGTAGGACCTTGCAGATGAATGCATTGCCAACGGGAGATGTCGAGATTGTATGA

Protein sequence

MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFSHISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVTDPSLPSVRFLSAGNGRTLQMNALPTGDVEIV

Homology

[Close]

BLAST of CmoCh17G005890 vs. ExPASy Swiss-Prot
Match: Q9M1B5 (RHOMBOID-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=RBL13 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 5.0e-124
Identity = 217/271 (80.07%), Postives = 248/271 (91.51%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFY+I+EKPATS I+ +C  IWF IQKK+IGYS VGLSYETA+EGH+WR+ITSA S
Sbjct: 1   MGRPLFYDIIEKPATSCIVTLCSVIWFVIQKKSIGYSQVGLSYETAIEGHYWRMITSALS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLGV+EQLGH+GLG AYYLHYTLVLV+ SG+LV+G+YHLLI +FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILS+KQPSSKL LFG LSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGI+VGYAI+WGLI GMNN+WAL+MLGW+V+VF+FSLKKS  YDF FLEIES+T
Sbjct: 181 SFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           D SLPSVRF+  GNGRTLQ +A+P   VE+V
Sbjct: 241 DASLPSVRFI--GNGRTLQASAVPLSGVEVV 269

[Close]

BLAST of CmoCh17G005890 vs. ExPASy Swiss-Prot
Match: O74926 (Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rbd2 PE=3 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 5.4e-09
Identity = 53/186 (28.49%), Postives = 90/186 (48.39%), Query Frame = 0


Query: 9   ILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHH-WRIITSAFSHISVIHL 68
           IL+ P  + II     + + +    I    + LS+   ++    + IIT    H+S++H+
Sbjct: 13  ILKLPIWTQIITYIAILVYALSFFGISTGVLSLSWIGLLQKRQLYEIITYVTLHLSMLHI 72

Query: 69  VFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFKLEYFRRV 128
           VFN  +L  L  + Q       +A  L   +   +  GI+ L +YH  ++K   +Y   V
Sbjct: 73  VFNFVSL--LPAMSQFEKKQGTLACILVTVIPYTLFPGIMHLIVYHFFLRK---DY---V 132

Query: 129 TAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQASFLGHLS 188
           +  G S   F +++   +  P   +  F   S+P    P   LI T+I+VP+ASF+GH S
Sbjct: 133 SIAGLSGWAFAFISASCVHSPQRLISFFNLFSIPAYCFPIIYLIMTTILVPKASFIGHAS 190

Query: 189 GIIVGY 194
           G ++GY
Sbjct: 193 GAVMGY 190

[Close]

BLAST of CmoCh17G005890 vs. ExPASy Swiss-Prot
Match: Q8RXW0 (Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL14 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 50/141 (35.46%), Postives = 73/141 (51.77%), Query Frame = 0


Query: 53  RIITSAFSHISVIHLVFN-MSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGM 112
           R+  SAF H++  HLV+N MS LW    LE    MG      + +TL+ +     L+L  
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWKGIKLET--SMGSSEFASMVFTLIGMSQGVTLLLAK 137

Query: 113 YHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLI 172
             LL+  +   Y+    AVG+S V+F    +L+  Q      ++G L +P  +A +  LI
Sbjct: 138 SLLLLFDYDRAYYNEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELI 197

Query: 173 FTSIIVPQASFLGHLSGIIVG 193
              + VP ASFLGHL GI+ G
Sbjct: 198 LVQMFVPNASFLGHLGGILAG 213

[Close]

BLAST of CmoCh17G005890 vs. ExPASy Swiss-Prot
Match: Q8LB17 (Rhomboid-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=RBL15 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 46/176 (26.14%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 52  WRIITSAFSHISVIHLVFNMSALWSLG-VLEQLGHMGLGVAYYLHYTLVLVILSGILVLG 111
           +R  T+   H S++H++FNM AL  +G  LE++    +G    L+ T++L   + +L   
Sbjct: 65  YRFYTAIIFHGSLLHVLFNMMALVPMGSELERI----MGSVRLLYLTVLLATTNAVL--- 124

Query: 112 MYHLLIQK-------FKLEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPIS 171
             HLLI         ++ ++     A+G+S ++F  + I +     +   +FG  ++P  
Sbjct: 125 --HLLIASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAK 184

Query: 172 FAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWGLIH----GMNNFWALSMLGWV 216
             P+  LI   +++   S LGHL GI+ G++ ++GL +    G + F  +    W+
Sbjct: 185 LYPWILLIVFQLLMTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIESASWM 231

[Close]

BLAST of CmoCh17G005890 vs. ExPASy Swiss-Prot
Match: Q6FSG0 (Rhomboid protein 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=RBD2 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.3e-06
Identity = 49/145 (33.79%), Postives = 78/145 (53.79%), Query Frame = 0


Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           H+S +HLVFN  AL  +G L          ++   +T V++ LS ++   +Y ++ +   
Sbjct: 65  HLSYLHLVFN--ALAIVGPLNNFES-----SHGTIHTGVVLNLSAVIAGIIYCVVSRLLS 124

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPS--SKLELFGFL-----SLPISFAPFESLIFT 180
           LE        G S  VF ++T L +K+     +LEL  F+     S+P  F P   L+FT
Sbjct: 125 LE----TGVAGASGWVFTFITYLCVKESQLYPRLELSRFIPGVTQSIPTQFTPVVFLLFT 184

Query: 181 SIIVPQASFLGHLSGIIVGYAIAWG 199
           +I+  Q+SFLGH +G+IVGY + +G
Sbjct: 185 AIVFFQSSFLGHTAGMIVGYIMGYG 198

[Close]

BLAST of CmoCh17G005890 vs. ExPASy TrEMBL
Match: A0A6J1GQ61 (RHOMBOID-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111456484 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 7.2e-150
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CmoCh17G005890 vs. ExPASy TrEMBL
Match: A0A6J1JPK2 (RHOMBOID-like protein 13 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488688 PE=3 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.6e-149
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGKPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CmoCh17G005890 vs. ExPASy TrEMBL
Match: A0A6J1JTB3 (RHOMBOID-like protein 13 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488688 PE=3 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.6e-149
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 14  MGKPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 73

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK
Sbjct: 74  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 133

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 134 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 193

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT
Sbjct: 194 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 253

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV
Sbjct: 254 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 284

[Close]

BLAST of CmoCh17G005890 vs. ExPASy TrEMBL
Match: A0A5A7TFB1 (RHOMBOID-like protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001080 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.4e-145
Identity = 260/271 (95.94%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG +EQLGH+GLGV YYLHYTLVLVILSG+LVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILS++QPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGWVVLVFIFSLKKSNTY+FDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLS+GNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CmoCh17G005890 vs. ExPASy TrEMBL
Match: E5GC88 (Rhomboid protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.4e-145
Identity = 260/271 (95.94%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG +EQLGH+GLGV YYLHYTLVLVILSG+LVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILS++QPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGWVVLVFIFSLKKSNTY+FDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLS+GNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CmoCh17G005890 vs. NCBI nr
Match: XP_022954125.1 (RHOMBOID-like protein 13 [Cucurbita moschata] >XP_022954126.1 RHOMBOID-like protein 13 [Cucurbita moschata] >XP_022954127.1 RHOMBOID-like protein 13 [Cucurbita moschata] >XP_023520866.1 RHOMBOID-like protein 13 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6575373.1 RHOMBOID-like protein 13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013913.1 RHOMBOID-like protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 539.7 bits (1389), Expect = 1.5e-149
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CmoCh17G005890 vs. NCBI nr
Match: XP_023520865.1 (RHOMBOID-like protein 13 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 539.7 bits (1389), Expect = 1.5e-149
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 14  MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 73

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK
Sbjct: 74  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 133

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 134 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 193

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT
Sbjct: 194 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 253

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV
Sbjct: 254 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 284

[Close]

BLAST of CmoCh17G005890 vs. NCBI nr
Match: XP_022992351.1 (RHOMBOID-like protein 13 isoform X1 [Cucurbita maxima])

HSP 1 Score: 538.5 bits (1386), Expect = 3.3e-149
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 14  MGKPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 73

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK
Sbjct: 74  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 133

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 134 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 193

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT
Sbjct: 194 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 253

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV
Sbjct: 254 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 284

[Close]

BLAST of CmoCh17G005890 vs. NCBI nr
Match: XP_022992352.1 (RHOMBOID-like protein 13 isoform X2 [Cucurbita maxima] >XP_022992353.1 RHOMBOID-like protein 13 isoform X2 [Cucurbita maxima] >XP_022992354.1 RHOMBOID-like protein 13 isoform X2 [Cucurbita maxima])

HSP 1 Score: 538.5 bits (1386), Expect = 3.3e-149
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGKPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CmoCh17G005890 vs. NCBI nr
Match: XP_008460036.1 (PREDICTED: RHOMBOID-like protein 13 [Cucumis melo] >ADN34087.1 rhomboid protein [Cucumis melo subsp. melo] >KAA0039939.1 RHOMBOID-like protein 13 [Cucumis melo var. makuwa] >TYK24563.1 RHOMBOID-like protein 13 [Cucumis melo var. makuwa])

HSP 1 Score: 525.4 bits (1352), Expect = 2.9e-145
Identity = 260/271 (95.94%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG +EQLGH+GLGV YYLHYTLVLVILSG+LVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILS++QPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGWVVLVFIFSLKKSNTY+FDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLS+GNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CmoCh17G005890 vs. TAIR 10
Match: AT3G59520.1 (RHOMBOID-like protein 13 )

HSP 1 Score: 445.3 bits (1144), Expect = 3.6e-125
Identity = 217/271 (80.07%), Postives = 248/271 (91.51%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFY+I+EKPATS I+ +C  IWF IQKK+IGYS VGLSYETA+EGH+WR+ITSA S
Sbjct: 1   MGRPLFYDIIEKPATSCIVTLCSVIWFVIQKKSIGYSQVGLSYETAIEGHYWRMITSALS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLGV+EQLGH+GLG AYYLHYTLVLV+ SG+LV+G+YHLLI +FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILS+KQPSSKL LFG LSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGI+VGYAI+WGLI GMNN+WAL+MLGW+V+VF+FSLKKS  YDF FLEIES+T
Sbjct: 181 SFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           D SLPSVRF+  GNGRTLQ +A+P   VE+V
Sbjct: 241 DASLPSVRFI--GNGRTLQASAVPLSGVEVV 269

[Close]

BLAST of CmoCh17G005890 vs. TAIR 10
Match: AT3G58460.1 (RHOMBOID-like protein 15 )

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08
Identity = 46/176 (26.14%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 52  WRIITSAFSHISVIHLVFNMSALWSLG-VLEQLGHMGLGVAYYLHYTLVLVILSGILVLG 111
           +R  T+   H S++H++FNM AL  +G  LE++    +G    L+ T++L   + +L   
Sbjct: 65  YRFYTAIIFHGSLLHVLFNMMALVPMGSELERI----MGSVRLLYLTVLLATTNAVL--- 124

Query: 112 MYHLLIQK-------FKLEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPIS 171
             HLLI         ++ ++     A+G+S ++F  + I +     +   +FG  ++P  
Sbjct: 125 --HLLIASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAK 184

Query: 172 FAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWGLIH----GMNNFWALSMLGWV 216
             P+  LI   +++   S LGHL GI+ G++ ++GL +    G + F  +    W+
Sbjct: 185 LYPWILLIVFQLLMTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIESASWM 231

[Close]

BLAST of CmoCh17G005890 vs. TAIR 10
Match: AT3G17611.1 (RHOMBOID-like protein 14 )

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08
Identity = 50/141 (35.46%), Postives = 73/141 (51.77%), Query Frame = 0


Query: 53  RIITSAFSHISVIHLVFN-MSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGM 112
           R+  SAF H++  HLV+N MS LW    LE    MG      + +TL+ +     L+L  
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWKGIKLET--SMGSSEFASMVFTLIGMSQGVTLLLAK 137

Query: 113 YHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLI 172
             LL+  +   Y+    AVG+S V+F    +L+  Q      ++G L +P  +A +  LI
Sbjct: 138 SLLLLFDYDRAYYNEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELI 197

Query: 173 FTSIIVPQASFLGHLSGIIVG 193
              + VP ASFLGHL GI+ G
Sbjct: 198 LVQMFVPNASFLGHLGGILAG 213

[Close]

BLAST of CmoCh17G005890 vs. TAIR 10
Match: AT3G58460.2 (RHOMBOID-like protein 15 )

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08
Identity = 46/176 (26.14%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 52  WRIITSAFSHISVIHLVFNMSALWSLG-VLEQLGHMGLGVAYYLHYTLVLVILSGILVLG 111
           +R  T+   H S++H++FNM AL  +G  LE++    +G    L+ T++L   + +L   
Sbjct: 88  YRFYTAIIFHGSLLHVLFNMMALVPMGSELERI----MGSVRLLYLTVLLATTNAVL--- 147

Query: 112 MYHLLIQK-------FKLEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPIS 171
             HLLI         ++ ++     A+G+S ++F  + I +     +   +FG  ++P  
Sbjct: 148 --HLLIASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAK 207

Query: 172 FAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWGLIH----GMNNFWALSMLGWV 216
             P+  LI   +++   S LGHL GI+ G++ ++GL +    G + F  +    W+
Sbjct: 208 LYPWILLIVFQLLMTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIESASWM 254

[Close]

BLAST of CmoCh17G005890 vs. TAIR 10
Match: AT3G17611.2 (RHOMBOID-like protein 14 )

HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04
Identity = 41/122 (33.61%), Postives = 60/122 (49.18%), Query Frame = 0


Query: 71  MSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFKLEYFRRVTAV 130
           MS LW    LE    MG      + +TL+ +     L+L    LL+  +   Y+    AV
Sbjct: 2   MSLLWKGIKLET--SMGSSEFASMVFTLIGMSQGVTLLLAKSLLLLFDYDRAYYNEY-AV 61

Query: 131 GYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGII 190
           G+S V+F    +L+  Q      ++G L +P  +A +  LI   + VP ASFLGHL GI+
Sbjct: 62  GFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELILVQMFVPNASFLGHLGGIL 118

Query: 191 VG 193
            G
Sbjct: 122 AG 118

The following BLAST results are available for this feature:

BLAST of CmoCh17G005890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1B5	5.0e-124	80.07	RHOMBOID-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=RBL13 PE=3 SV=1	[more]
O74926	5.4e-09	28.49	Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284...	[more]
Q8RXW0	1.7e-07	35.46	Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL14...	[more]
Q8LB17	1.7e-07	26.14	Rhomboid-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=RBL15 PE=1 SV=2	[more]
Q6FSG0	7.3e-06	33.79	Rhomboid protein 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / ...	[more]

BLAST of CmoCh17G005890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQ61	7.2e-150	100.00	RHOMBOID-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111456484 PE=3 SV=1	[more]
A0A6J1JPK2	1.6e-149	99.63	RHOMBOID-like protein 13 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488688 ...	[more]
A0A6J1JTB3	1.6e-149	99.63	RHOMBOID-like protein 13 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488688 ...	[more]
A0A5A7TFB1	1.4e-145	95.94	RHOMBOID-like protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
E5GC88	1.4e-145	95.94	Rhomboid protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]

BLAST of CmoCh17G005890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954125.1	1.5e-149	100.00	RHOMBOID-like protein 13 [Cucurbita moschata] >XP_022954126.1 RHOMBOID-like prot...	[more]
XP_023520865.1	1.5e-149	100.00	RHOMBOID-like protein 13 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022992351.1	3.3e-149	99.63	RHOMBOID-like protein 13 isoform X1 [Cucurbita maxima]	[more]
XP_022992352.1	3.3e-149	99.63	RHOMBOID-like protein 13 isoform X2 [Cucurbita maxima] >XP_022992353.1 RHOMBOID-...	[more]
XP_008460036.1	2.9e-145	95.94	PREDICTED: RHOMBOID-like protein 13 [Cucumis melo] >ADN34087.1 rhomboid protein ...	[more]

BLAST of CmoCh17G005890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59520.1	3.6e-125	80.07	RHOMBOID-like protein 13	[more]
AT3G58460.1	1.2e-08	26.14	RHOMBOID-like protein 15	[more]
AT3G17611.1	1.2e-08	35.46	RHOMBOID-like protein 14	[more]
AT3G58460.2	1.2e-08	26.14	RHOMBOID-like protein 15	[more]
AT3G17611.2	1.4e-04	33.61	RHOMBOID-like protein 14	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 10..200 e-value: 1.0E-23 score: 86.0
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 13..199
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 48..201 e-value: 1.5E-25 score: 89.9
None	No IPR available	PANTHER	PTHR43731:SF20	RHOMBOID-LIKE PROTEIN 13	coord: 1..271
None	No IPR available	PANTHER	PTHR43731	RHOMBOID PROTEASE	coord: 1..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G005890.1	CmoCh17G005890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity