CmoCh17G005590 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGTAAAAAAAAATAATAATAATAATAATTAATGTCGACGCAATCGAAAATTCCGGGGGAGGTGACTCACGCCAGCACCGCCGTGCTGGAGACCGCCACCGCCGCCGTCCAACGCTTCCGACCGATCAACCAGATCCACCAGCACCTCTGCGCGTAAAAGCTTCCTTCCACAATCAAATCCCATTTGATGTTTTTAATGTATAATTTTTAATTTGGATGAATTTGAATTAGGTTTCATTTCTACTCACACGACATGACGAGGCAGCTGGAGGCTCACCACTTCTGCGCCCACCTGAACGAGGAGGTCCGACAGTGTCTGATCTACGACAGCCCCGAGAAGGATGCTAGGCTCATAGGTGAGAATATTTGCTAAAATCATTTAACTGAATGTCTTAAATTCTCTATTTATAATTATTTATAAATGACAGATAATAAATGGAAAGAGCAGTAAATGGATATAAGATCTAATTCAGTATTAAATATTGTTAACGATAGGGATTGAGTATATTATATCGGAGAATCTGTTCCTGACGTTGCCCGACGAGGAGAAGCGTTTCTGGCACTCGCACGAGTACGAAGTGAAGAGTGGGACTCTGTTCATGCCGGGCGTGCCCGGGGCGATCGAGCGGGTGGACATGGAGAAAGTGTGCAAGACGTATGGGAAAGTATTCCATTTCTGGCAGGTGGATCGAGGCGACATTCTACCGCTGGGCATTCCGCAGCTAATGATGGCGCTAACGCGGGATGGGCAGCTCGATCCGAGTCTATCACTAAGTAAGCGAGTGTGTGTGCTTGTTGTTTCACAAATTCATTTGAAGATGATGATTGATTTGATTTGATTTGATTCGATTTGATTCGTAGAGGTTGAGACACGATACGGGGTGTCGTTTGAGGAGGAGAGGAGGAAGAGGGAGAGCATGTCGGGGCCGGAGCATGGTGTTCATCCGATGGCGAACGGCGGTGGGGGAGGGCTGAAGACAGAACTCAGGGAGACGGAGGCGGCGGCGGCGGCGGCTTCAATTCCAAGAGTCTTCGTTTGATCTTAGATTATATTTGTGAAGTTGTGTTGTTTTAAATTATGGATAAATAAATAAGAGGTAGTGGTGCTTTCTGCCATAAAATTCCAAACAAAATTTCACAAATGTTTTGACACACAAATTGCAGTATGAACTCAACTATGTAAAGTCTACCTTCAGGTCGCTACCTCTTATTTATGCGGAATATAATTTTATATTCCTAAACTGACCTTCAATTCCCTACGTACGAGCGTGAATCTCCACATGGTTCGTTCACACTCCTTGAACCCATCATAGTCGAGTAGTCGAG TTGTAAAAAAAAATAATAATAATAATAATTAATGTCGACGCAATCGAAAATTCCGGGGGAGGTGACTCACGCCAGCACCGCCGTGCTGGAGACCGCCACCGCCGCCGTCCAACGCTTCCGACCGATCAACCAGATCCACCAGCACCTCTGCGCGTTTCATTTCTACTCACACGACATGACGAGGCAGCTGGAGGCTCACCACTTCTGCGCCCACCTGAACGAGGAGGTCCGACAGTGTCTGATCTACGACAGCCCCGAGAAGGATGCTAGGCTCATAGGGATTGAGTATATTATATCGGAGAATCTGTTCCTGACGTTGCCCGACGAGGAGAAGCGTTTCTGGCACTCGCACGAGTACGAAGTGAAGAGTGGGACTCTGTTCATGCCGGGCGTGCCCGGGGCGATCGAGCGGGTGGACATGGAGAAAGTGTGCAAGACGTATGGGAAAGTATTCCATTTCTGGCAGGTGGATCGAGGCGACATTCTACCGCTGGGCATTCCGCAGCTAATGATGGCGCTAACGCGGGATGGGCAGCTCGATCCGAGTCTATCACTAAAGGTTGAGACACGATACGGGGTGTCGTTTGAGGAGGAGAGGAGGAAGAGGGAGAGCATGTCGGGGCCGGAGCATGGTGTTCATCCGATGGCGAACGGCGGTGGGGGAGGGCTGAAGACAGAACTCAGGGAGACGGAGGCGGCGGCGGCGGCGGCTTCAATTCCAAGAGTCTTCGTTTGATCTTAGATTATATTTGTGAAGTTGTGTTGTTTTAAATTATGGATAAATAAATAAGAGGTAGTGGTGCTTTCTGCCATAAAATTCCAAACAAAATTTCACAAATGTTTTGACACACAAATTGCAGTATGAACTCAACTATGTAAAGTCTACCTTCAGGTCGCTACCTCTTATTTATGCGGAATATAATTTTATATTCCTAAACTGACCTTCAATTCCCTACGTACGAGCGTGAATCTCCACATGGTTCGTTCACACTCCTTGAACCCATCATAGTCGAGTAGTCGAG ATGTCGACGCAATCGAAAATTCCGGGGGAGGTGACTCACGCCAGCACCGCCGTGCTGGAGACCGCCACCGCCGCCGTCCAACGCTTCCGACCGATCAACCAGATCCACCAGCACCTCTGCGCGTTTCATTTCTACTCACACGACATGACGAGGCAGCTGGAGGCTCACCACTTCTGCGCCCACCTGAACGAGGAGGTCCGACAGTGTCTGATCTACGACAGCCCCGAGAAGGATGCTAGGCTCATAGGGATTGAGTATATTATATCGGAGAATCTGTTCCTGACGTTGCCCGACGAGGAGAAGCGTTTCTGGCACTCGCACGAGTACGAAGTGAAGAGTGGGACTCTGTTCATGCCGGGCGTGCCCGGGGCGATCGAGCGGGTGGACATGGAGAAAGTGTGCAAGACGTATGGGAAAGTATTCCATTTCTGGCAGGTGGATCGAGGCGACATTCTACCGCTGGGCATTCCGCAGCTAATGATGGCGCTAACGCGGGATGGGCAGCTCGATCCGAGTCTATCACTAAAGGTTGAGACACGATACGGGGTGTCGTTTGAGGAGGAGAGGAGGAAGAGGGAGAGCATGTCGGGGCCGGAGCATGGTGTTCATCCGATGGCGAACGGCGGTGGGGGAGGGCTGAAGACAGAACTCAGGGAGACGGAGGCGGCGGCGGCGGCGGCTTCAATTCCAAGAGTCTTCGTTTGA MSTQSKIPGEVTHASTAVLETATAAVQRFRPINQIHQHLCAFHFYSHDMTRQLEAHHFCAHLNEEVRQCLIYDSPEKDARLIGIEYIISENLFLTLPDEEKRFWHSHEYEVKSGTLFMPGVPGAIERVDMEKVCKTYGKVFHFWQVDRGDILPLGIPQLMMALTRDGQLDPSLSLKVETRYGVSFEEERRKRESMSGPEHGVHPMANGGGGGLKTELRETEAAAAAASIPRVFV Homology
BLAST of CmoCh17G005590 vs. ExPASy Swiss-Prot
Match: Q9ZVY7 (Oil body-associated protein 1A OS=Arabidopsis thaliana OX=3702 GN=OBAP1A PE=1 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 2.7e-89 Identity = 147/229 (64.19%), Postives = 187/229 (81.66%), Query Frame = 0
BLAST of CmoCh17G005590 vs. ExPASy Swiss-Prot
Match: B4FFZ9 (Oil body-associated protein 1A OS=Zea mays OX=4577 GN=OBAP1A PE=2 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 1.0e-88 Identity = 151/229 (65.94%), Postives = 182/229 (79.48%), Query Frame = 0
BLAST of CmoCh17G005590 vs. ExPASy Swiss-Prot
Match: Q8GWR2 (Oil body-associated protein 1B OS=Arabidopsis thaliana OX=3702 GN=OBAP1B PE=1 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 4.2e-87 Identity = 148/228 (64.91%), Postives = 182/228 (79.82%), Query Frame = 0
BLAST of CmoCh17G005590 vs. ExPASy Swiss-Prot
Match: B4FFK9 (Oil body-associated protein 2A OS=Zea mays OX=4577 GN=OBAP2A PE=2 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 7.3e-47 Identity = 88/193 (45.60%), Postives = 124/193 (64.25%), Query Frame = 0
BLAST of CmoCh17G005590 vs. ExPASy Swiss-Prot
Match: Q941A4 (Oil body-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=OBAP2A PE=2 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.9e-43 Identity = 90/219 (41.10%), Postives = 129/219 (58.90%), Query Frame = 0
BLAST of CmoCh17G005590 vs. ExPASy TrEMBL
Match: A0A6J1EQ17 (oil body-associated protein 1A-like OS=Cucurbita moschata OX=3662 GN=LOC111436352 PE=3 SV=1) HSP 1 Score: 479.6 bits (1233), Expect = 7.7e-132 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of CmoCh17G005590 vs. ExPASy TrEMBL
Match: A0A6J1JPN4 (oil body-associated protein 1A-like OS=Cucurbita maxima OX=3661 GN=LOC111488706 PE=3 SV=1) HSP 1 Score: 459.5 bits (1181), Expect = 8.2e-126 Identity = 226/236 (95.76%), Postives = 229/236 (97.03%), Query Frame = 0
BLAST of CmoCh17G005590 vs. ExPASy TrEMBL
Match: A0A1S3CGF6 (oil body-associated protein 1A-like OS=Cucumis melo OX=3656 GN=LOC103500478 PE=3 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 2.6e-111 Identity = 198/234 (84.62%), Postives = 211/234 (90.17%), Query Frame = 0
BLAST of CmoCh17G005590 vs. ExPASy TrEMBL
Match: A0A6J1DBJ6 (oil body-associated protein 1A-like OS=Momordica charantia OX=3673 GN=LOC111018598 PE=3 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 8.0e-105 Identity = 186/234 (79.49%), Postives = 204/234 (87.18%), Query Frame = 0
BLAST of CmoCh17G005590 vs. ExPASy TrEMBL
Match: A0A5D3D5L2 (Oil body-associated protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00240 PE=3 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.5e-103 Identity = 188/234 (80.34%), Postives = 202/234 (86.32%), Query Frame = 0
BLAST of CmoCh17G005590 vs. TAIR 10
Match: AT1G05510.1 (Protein of unknown function (DUF1264) ) HSP 1 Score: 329.7 bits (844), Expect = 1.9e-90 Identity = 147/229 (64.19%), Postives = 187/229 (81.66%), Query Frame = 0
BLAST of CmoCh17G005590 vs. TAIR 10
Match: AT2G31985.1 (Protein of unknown function (DUF1264) ) HSP 1 Score: 322.4 bits (825), Expect = 3.0e-88 Identity = 148/228 (64.91%), Postives = 182/228 (79.82%), Query Frame = 0
BLAST of CmoCh17G005590 vs. TAIR 10
Match: AT5G45690.1 (Protein of unknown function (DUF1264) ) HSP 1 Score: 176.8 bits (447), Expect = 2.0e-44 Identity = 90/219 (41.10%), Postives = 129/219 (58.90%), Query Frame = 0
BLAST of CmoCh17G005590 vs. TAIR 10
Match: AT4G18920.1 (Protein of unknown function (DUF1264) ) HSP 1 Score: 174.5 bits (441), Expect = 1.0e-43 Identity = 82/193 (42.49%), Postives = 122/193 (63.21%), Query Frame = 0
BLAST of CmoCh17G005590 vs. TAIR 10
Match: AT1G29680.1 (Protein of unknown function (DUF1264) ) HSP 1 Score: 166.0 bits (419), Expect = 3.6e-41 Identity = 79/202 (39.11%), Postives = 125/202 (61.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|