CmoCh17G005120 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G005120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Location	Cmo_Chr17: 4942545 .. 4948604 (-)
RNA-Seq Expression	CmoCh17G005120
Synteny	CmoCh17G005120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGTAAAGCGACTGAACAGTAAGTAAGAAAAGAAGACGAAACCAAACCCTTGTACTCTACGATATGACCTTCCCTGAGCTTTACAACTGATTTACTTTATATACTCCTTTCCCTTAAGGTAAAGCAGCTTCGTATTGAATGGACTCTCCTTGAACCTTTAATGATCCTTCACAGTCAGGAAAGACTCAACTAAACATTCGTCATCAAGAACAGGCTGTATGAGAATCAGGTCAAGCGACTGAACCAACCTCTCGTCCCTGACCTTAAACACGAGGTAAAGAGGAGGGAGGATGATTCTTGAACGAATCGTAAACACTCAACTCTGGATGAATGAGACGGAACGGAACAGGCAGGAAGGAAAGAAGAAACAAAGATTCTGTCTCCTTAACTACTTAACCAAACAAAGATTCTGTCTCCTTAACTACTTCCCCTACTAATTGATTCAAAGACTAGGTAAAGCATATTCAACAATTCATTCTTGTGAACTGGAAAGTGGCTTCATTCGCCAACCCAACCCATTACTATTGGTCTAACAGTTTAGCTCCGATGCATTCTCCTTAGCTTAGTTAGCTACTGAACTCATTCGACTCTACAGCTTGGTCTCACAGCTTCGCTCCTCTCCCCTCTCCCTATCCGTCGAGAGGCTTCGCTCATTTGCCCTTATTTTGTCTCACAGCTTCCCTCCTACCTACACCTTCCTACCTACACTTATCTATTCTACTAATTCTTATCTTTATACGGGAGAGAAAGAAAGAGAGTACGGGAGAGAAAGAGAGTACTGGAGAGAAAGAAGGAAGACAGATTAATTAGACTTGACAGGAGAACCACTTACTCACTCACCCACCTCACCTGATTGAACAACAAGTTAAGTAAAGACAGACTTGCCAGGAGAACCCCTTACTCACTTGCCAGTCATTCACCTGATTAAACAAGGTAAGTAAAGGTAAAGACAGACTTGACAGGAGAGCCACTGACTCATGAACGGGATGGGATGGAACAAGGTAACAAGGTAAGTCTGGATGGAACAAGGAGGTAACAAGGCAAGGTAACAAGGTAAGTAAAGACAAGACAAGACAGACTATTTCTTCTTGATCTTCTCCTTCACCTCCTCTGTCGGTTTCCCAATTCCATTGCCTGAACCTCGTAAACAAACAAGAGTTTTCCTCCTCTCCTCTTCTCGTCGAGTAGCTGTGCTCCTCTCCCGACACCCTTTGACTTCTTTCACTCTTCATTATCCTGCCCCTCTACAATTCCATTGCCTGAACCGATATTCTATATTTCACTCTTTCACCGATATTACTTGATTTAACCGATATTACTTGATTTCCCACTATAGACCAATCTTAACCGATATTACTTGATTGAACCGATATTGCTTGATTTGACTCTTTAACAAGGGAAATATAGGTAGGATGAGAAGAAACTCTCATGTCCCGGGCCGGTTGGTTCCTTGCCTTGTCTGACTGCTTGCTTGGCTCCTTCACCTATTATTATTTATTCTGTAACAGTAAGGGAAACTCTTTAACTAACTACTGAACCGTAACCTATTTATATTCTTACACTAGGTAAAGCAGTGTTGCTGAGGATTGAATTTCCTCTCTTGCTTGTAAACTCTTTCTCTGACCCTATTTATTTATTCTTTCAATTCATTAGCTACTTCACGTTCACCTTTATTCCCTTCTGGTTGGTTATTCTTGTTAAGAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATTCACCGTGCAATGGATGCCGTTATTCATAGACAGAAGAATCATGGTATGCGCTTCCCTTCCGTGTACTAGCTAAAGGGTGACGTTTGTCTGGTGGAGACCATATTCCCGCTGGCACCGTAGTAGATAAACTTCAAGGGGAAAGAGACATCACTTTCTTTAGGCTTTGTTGATTTATACTACGTGATGATTCTCTTGAAAAAGATCGAACGATATTTATTTCACTGAAGATTGGGTCTCTTTCTTTACCAGGTCTTCTATCAGTGGCTTCCGGTGGTATTCACGTTTGGGATATGCCTGCTCTAACCGAGATGGAGATGATTCTGTACTCCAATTCGGCGGAGGAACTTTGGGGCTAGGGGGAATGGACCATGTGCCGTAGCTAACCGAGTAGCTCTAGAAGGATGTGTACAAGCTCGTAATGAGGGACGTGATCTTGCTCGTGAGGGTGAATTATCGGTGAGGCTAGTAACTGGAGTCTTGAACTAGCTGCTGCTTGTGAAGTATGGAAGGCGATCAAATTCTAATTTGAGTAGAGACTTTGTAAGGCAGGAATGAATGACTCTTCGTTCTTTTCATTGACTTTCAATTAAAGAAAACTCGGCCCCCACCCAACCAATCTTTTACTAAAAGGATTGAGCCAAATACAATACAAAGATACTATTGGATAGCTTTTTACTAGATATACAAAATGCAAGAAATCCAAATCTAAGAGAACGTAAACATTTTTCTTGTTGTCTCGGATCATCCGCAATTAAGTAAGCCTATGGATCCTTAGAATTGGTGTAGCGTTTAATATCTTATATCCCCCGTCCGTCGTTTCAGATCATGGATCGAGCCAAGTATCACAACTTCTTCTACCCATCCTGTATATTGTCCTTTCTTTTTGTTCTGTCTTGGAATACCCATTTGGTAGTAAAGGAGATTGATTTTACGAAAAAAAGTTCTTCATATGAATAGGGGAACAACCAACCCTTCTTTTTTAAGACCGACTCGTTAGTAATAATCCGAGTGATTGGATTTAGATCCTATTCCTGATAGGAAATGAGATATTCATCAAATGATTGATTTTTTGATCGAATGACTATTCATTGTATTTTGATGGAAATAGGGGCAAGAAAGCTCTATGGAAAAAAGATGGTGAAATTCGAGGTTGGCTAACGGGGAGTTAGAATACAGGTATAAGCTAACTAAATCAATCAATAGTCTTGGTCCTATTGAAAGTGAAGGATCAATAATAATATTCATCAAAAGATTCCTAGTCATAGTGAGAATTCGAGTTAGAGTACCGTTGATGATTTAGTCGGCCGGCATTCGGTCGTATCTGATGACACTTTTTTAGTTAGGGATAGTAATAGCTGCGGCAGTTATTCCATATATTTGGATAGTGCAAATCTAATACTGCTTGAGATTGACAATGATCCTTCTTTTGTAAGTGAACTAGAAAGTTATAGTTTTTGGAACCGAGCTCTACTTATAAAAAGAATCTATCTAAGAGTGATGAGAGAGACTATGATCGTTACATAGATGATACTAAATATAGTTGGAATAATCACATTAATGCATTGACAGTTATCTTAGGGCTCAAATCCGTATGGATACTGACTGTTTCAGTGGTAGTCACACACAATTAGAGTGAGAGTGACGTTTATAGTGAGATTTGGGGTTCAGGTGCAAATAGTAGTGAAAGTGAGAGTTCCAGTATAAGAACTAGCACGGATGGAAGTGATTTAACTAGAACGGAGAGTGATATCTCAAGTGATACCTCAAGTTCTACGGAAAGTTCTATCTCAAGTGATACCCCTCAAGTGATACCTCAAGTTCTACCTTAAGTTCTAATGATCTAGATGGAACTGAAACAGGCATTTGTGGGTTCAATGCGCAAATTGGTTATGTATTCAATTATAAGAAGGATTAGAAATCTCAAATGAATAGTTGTTCACAATGTGGATACCATTTTCAAATGAGTAGTTCACAGATAGAATCGAACTTTTGATTGATCGAGCCAGGTACTTGGGACCCTATGGATGAAGACATGGTCTCTTTCTTTGGATCCCATTGAATTTCATTCGGAGGAGGAACATTATAAAGATCATATTGAGTCTTATCAAATAAAGACAGGATTAACAGCTGATGAGGCTATTCAAAGAGGCACAGGTAAATGAATCGGTATTCCCATATAGCAATTGGGATTATAGATTTTCCGTTTATGGGGTTGGTATCTGTAGTAGGCGAGAGAATCACCCCTTTGATCGGCTGGCTACTTGACCTCTAATTTGAGTGTGTACTTCTGTAGGAGGAGGCATGGAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGGCAAAAACATCTTCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTCCATCTCCTACTACTGGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCACATTTGCGGGTAAAAGAGTAATTGATTGAAGAAGAAAGATTGAATACGAGAGTCAGTCCGGAGGGTTCCCAAGTGGCTGACGTTGGATAAGGGCTTATTCGATCTAAACCACGTAATCCTTTAAAAGGTGTTTGAGTGAGTTATTTCAGCTCCAGGCGTTCCCTCGAATCAAAATTCAATCAAGTCAAACCTTACTTAAAACTCTTCCAAAATTAATTCCTTGTAAGTATTTGTAAGAAAGAAGTAGTTATTTAGTTTATAGGAATCAAAGTCCAAATTCGAAGAATGTATTTTTCTTTGGTAACATAAGATGAAATTGTAGAAAGAATCATGCGTAGAAATGGGTTTGACCAATATTCTAATTAGGAAGCCCCTATTAAATAAAAGAGCTAATTCTTTCTTCTGCTAAATTAGGTAGGCGGGGAAGAAAATGAATTTCATGCTCCCTTCCTTCCTTCTTACATTACATGTGGATATATAATCCAACTATAGCAAATAGCGGCATAGAGTCTTGCATCTTTCTACATCTGTTGAGTTTCTCTAGTTTGACTACGAATCCCTGTTTGTTGTTGGATCGGATTATAACGAACTTTTGGGTAAGAAGTGGATATTACTTAGTGTAATTCTATATGAATGAGTATAATTATCAGATACCTTTTTTAACAAGAAATAAATAAGAGGTAAATTAATATAACAATAAATAAGAGGTAGAAATATTAAGTCGAGGTATCCATATTCTATGACAAACTTACCCTTTCTCTACTTTTGTGCCTTTAGTAAGCCTAGTATTTCCGGCAATTGGAATGACTTCTTTATCTCTTCATGTTAAAAAAAAGAAGATTATTTATGCTACACGTCTATTTGTTTTTTTCAAAACTTAGACTTTGACACGATAACACAGCTATCTATTTAGTAGACGGCAGTCGAAGATGTGGCTGACTCCAAACATAAGCGATTATACATGCGTAAACATGATATCTGAGGAAATTCATTCTCAAGTATTTGCTCTAATCTCCAATATATAACTGATCGGGTGACGAATGGTTGAGATGTCAAATCAATATATCTATATGGATGTAGGTATCCATAGGGAATCATATAAAGGTGATGCTATTATTTGAGATCTAAGTAATTCGATGAGTTACTCCGTCAGTCAAGGTTCACATCAAAATAGTGCTAGTTGATTAGAGTGACTACTTTGGAAACAAAAAAAGGCAAATATCCGTTATTCTATCAATTCCAATAAAATGCAACGAAATCTAGTATGAGTTAGCGATCAGAACATATATGGATAGAATTTATAAGAAAAAAGAGGATCTCAAAAGCAATTTACGCTGGGCCTTTATCTATCCTTTTTTGAGGTTCATTCATTAGGGGTTTTGTTGGTTGGAACTTCCAGTTATCTTGCTTGGTAGGGATTTGATATCTTGATTTCCGTGTCTCAGCAAAGAATTAGTTTGTTTGTTTTCCACAGGGGATCGTAATGTCTTTCTATGGGATTGCAGGTCTCTTTATTAGCTCCTTCCTATTTGTGGTGCACCATTTTGGGTAACGTAGGTAGCGGTTATGATGGATTGGATAGAAAAGAAGGAATAGTGTCTATTTTGGGGGGTTTCCTGGACAAAATCCTAGAATCTGACTCCGATTCCTTATGAAAGACATTCAGTCCATCAGAATAGAAGTGAAAGAGGGTATTTATGCACAGTCGTGTCCTTTATATGGAAATCAGAGGCCAAGGGTTGACTCGTACCGATCAGAATCTGACCCACCACCACACGAGAGAGAAAGACGAAATTGA

mRNA sequence

ATGAGGGTAAAGCGACTGAACACTACTTCACGTTCACCTTTATTCCCTTCTGGTTGGTTATTCTTGTTAAGAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATTCACCGTGCAATGGATGCCGTTATTCATAGACAGAAGAATCATGGTCTTCTATCAGTGGCTTCCGGTGGTATTCACGTTTGGGATATGCCTGCTCTAACCGAGATGGAGATGATTCTGGGGAATGGACCATGTGCCGTAGCTAACCGAGTAGCTCTAGAAGGATGTGTACAAGCTCGTAATGAGGGACGTGATCTTGCTCGTGAGGGTGAATTATCGGTGAGGCTAAGTACCGTTGATGATTTAGTCGGCCGGCATTCGGTCGTATCTGATGACACTTTTTTAGTTAGGGATAGTAATAGCTGCGGCAGTTATTCCATATATTTGGATAGTGCAAATCTAATACTGCTTGAGATTGACAATGATCCTTCTTTTTTTTTGGAACCGAGCTCTACTTATAAAAAGAATCTATCTAAGAGTGATGAGAGAGACTATGATCGTTACATAGATGATACTAAATATAGTTGGAATAATCACATTAATGCATTGACAGTTATCTTAGGGCTCAAATCCGTATGGATACTGACTGTTTCAGTGAGTGAGAGTGACGTTTATAGTGAGATTTGGGGTTCAGGTGCAAATAGTAGTGAAAGTGAGAGTTCCAGTATAAGAACTAGCACGGATGGAAGTGATTTAACTAGAACGGAGAGTGATATCTCAAGTGATACCTCAAGTTCTACGGAAAGTTCTATCTCAAGTGATACCCCTCAAATGGAACTGAAACAGGCATTTGTGGGTTCAATGCGCAAATTGGAGGAGGCATGGAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGGCAAAAACATCTTCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTCCATCTCCTACTACTGGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCACATTTGCGGGTAAAAGAGTCTCTTTATTAGCTCCTTCCTATTTGTGGTGCACCATTTTGGGTAACGTAGGTAGCGGTTATGATGGATTGGATAGAAAAGAAGGAATAGTGTCTATTTTGGGGGACATTCAGTCCATCAGAATAGAAGTGAAAGAGGGTATTTATGCACAGTCGTGTCCTTTATATGGAAATCAGAGGCCAAGGGTTGACTCGTACCGATCAGAATCTGACCCACCACCACACGAGAGAGAAAGACGAAATTGA

Coding sequence (CDS)

ATGAGGGTAAAGCGACTGAACACTACTTCACGTTCACCTTTATTCCCTTCTGGTTGGTTATTCTTGTTAAGAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATTCACCGTGCAATGGATGCCGTTATTCATAGACAGAAGAATCATGGTCTTCTATCAGTGGCTTCCGGTGGTATTCACGTTTGGGATATGCCTGCTCTAACCGAGATGGAGATGATTCTGGGGAATGGACCATGTGCCGTAGCTAACCGAGTAGCTCTAGAAGGATGTGTACAAGCTCGTAATGAGGGACGTGATCTTGCTCGTGAGGGTGAATTATCGGTGAGGCTAAGTACCGTTGATGATTTAGTCGGCCGGCATTCGGTCGTATCTGATGACACTTTTTTAGTTAGGGATAGTAATAGCTGCGGCAGTTATTCCATATATTTGGATAGTGCAAATCTAATACTGCTTGAGATTGACAATGATCCTTCTTTTTTTTTGGAACCGAGCTCTACTTATAAAAAGAATCTATCTAAGAGTGATGAGAGAGACTATGATCGTTACATAGATGATACTAAATATAGTTGGAATAATCACATTAATGCATTGACAGTTATCTTAGGGCTCAAATCCGTATGGATACTGACTGTTTCAGTGAGTGAGAGTGACGTTTATAGTGAGATTTGGGGTTCAGGTGCAAATAGTAGTGAAAGTGAGAGTTCCAGTATAAGAACTAGCACGGATGGAAGTGATTTAACTAGAACGGAGAGTGATATCTCAAGTGATACCTCAAGTTCTACGGAAAGTTCTATCTCAAGTGATACCCCTCAAATGGAACTGAAACAGGCATTTGTGGGTTCAATGCGCAAATTGGAGGAGGCATGGAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGGCAAAAACATCTTCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTCCATCTCCTACTACTGGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCACATTTGCGGGTAAAAGAGTCTCTTTATTAGCTCCTTCCTATTTGTGGTGCACCATTTTGGGTAACGTAGGTAGCGGTTATGATGGATTGGATAGAAAAGAAGGAATAGTGTCTATTTTGGGGGACATTCAGTCCATCAGAATAGAAGTGAAAGAGGGTATTTATGCACAGTCGTGTCCTTTATATGGAAATCAGAGGCCAAGGGTTGACTCGTACCGATCAGAATCTGACCCACCACCACACGAGAGAGAAAGACGAAATTGA

Protein sequence

MRVKRLNTTSRSPLFPSGWLFLLRGGFTANTSLAHYCRDNGLLLHIHRAMDAVIHRQKNHGLLSVASGGIHVWDMPALTEMEMILGNGPCAVANRVALEGCVQARNEGRDLAREGELSVRLSTVDDLVGRHSVVSDDTFLVRDSNSCGSYSIYLDSANLILLEIDNDPSFFLEPSSTYKKNLSKSDERDYDRYIDDTKYSWNNHINALTVILGLKSVWILTVSVSESDVYSEIWGSGANSSESESSSIRTSTDGSDLTRTESDISSDTSSSTESSISSDTPQMELKQAFVGSMRKLEEAWKKEGSVSLMQMAKTSSSALYDYQSNKRFFYVAILPSPTTGGVTASFGILGDIIIAEPNAYITFAGKRVSLLAPSYLWCTILGNVGSGYDGLDRKEGIVSILGDIQSIRIEVKEGIYAQSCPLYGNQRPRVDSYRSESDPPPHERERRN

Homology

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BLAST of CmoCh17G005120 vs. ExPASy Swiss-Prot
Match: Q2QD80 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Cucumis sativus OX=3659 GN=accD PE=3 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 1.4e-41
Identity = 159/415 (38.31%), Postives = 184/415 (44.34%), Query Frame = 0


Query: 122 STVDDLVGRHSVVSDDTFLVRDSNSCGSYSIYLDSANLILLEIDNDPSFFLE-------- 181
           STVDDLVG  + VSDDTFLVRDSNS  SYSIYLD  N I  EIDNDPSF  E        
Sbjct: 57  STVDDLVGIRNFVSDDTFLVRDSNS-SSYSIYLDIENQI-FEIDNDPSFVSELESSFYSF 116

Query: 182 PSSTYKKNLSKSDERDYDRYIDDTKYSWNNHINA-----LTVILGLKSVWILTVS--VSE 241
            +STY+ N+SK+D+  YDRY+ DTKYSWNNHIN+     L   + + S +IL+ S   S+
Sbjct: 117 RNSTYQNNISKNDDSHYDRYMYDTKYSWNNHINSCIDSYLRTQICIDS-YILSGSHNYSD 176

Query: 242 SDVYSEIWGSGANSSESESSSIRTSTDGSDLTRTESDISSDTSSSTESS----ISSDTPQ 301
           S +YS I G G NSSESES SIRTST G++LT TES    D   +T  S    I  +  +
Sbjct: 177 SYIYSYICGEGGNSSESESFSIRTSTHGNNLTITESSNDLDNDRTTNYSDFWVICENCHK 236

Query: 302 MELKQAFVGSMRKLEEA------------------------------------------- 361
              K+ F   M   EE                                            
Sbjct: 237 FNYKRLFKSKMNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI 296

Query: 362 -WK--------------------------------------------------------- 369
            WK                                                         
Sbjct: 297 QWKSQVDPIEGDSEVDLIEGDSEEYKDSSYKDRISSSQIETGLPEAIQTGTGKLNGIPVA 356

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BLAST of CmoCh17G005120 vs. ExPASy Swiss-Prot
Match: Q09X08 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Morus indica OX=248361 GN=accD PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.2e-35
Identity = 148/385 (38.44%), Postives = 179/385 (46.49%), Query Frame = 0


Query: 122 STVDDLVGRHSV---VSDDTFLVRDSNSCGSYSIYLDSANLILLEIDNDPSFFLEP---- 181
           S VD LVG   +   +SDDTFLVRDSN   SY+IY D  N I  EIDN  SF  EP    
Sbjct: 62  SNVDHLVGVRYIRNFLSDDTFLVRDSNR-DSYTIYFDIENQI-FEIDNHDSFISEPENSF 121

Query: 182 ----SSTYKKNLSKSDERDYDRYIDDTKYSWNNHINA-----LTVILGLKSVWILTVSVS 241
               +S+Y  N+SK+D+  YDRY+ DT+YSWNNHIN+     L   + + S  ILT S +
Sbjct: 122 YSYQNSSYLNNVSKNDDPRYDRYVYDTQYSWNNHINSCIGSYLRYQICIDSD-ILTSSDN 181

Query: 242 ESD--VYSEIWGSGANSSESESSSIRTSTDGSDLT---RTESDI---------------- 301
            +D  +Y+ I G   NS+ESESS+IRT  D SDLT    + +D+                
Sbjct: 182 YNDNYIYTYICGERVNSNESESSNIRTGADDSDLTTIRESSNDLDVTQKYRHLWVQCENC 241

Query: 302 --------------------------SSDT----------SSSTESSISSDTPQMELK-- 361
                                     SSD               E  +S D  +   +  
Sbjct: 242 YGLNYKRFLKSKMNICEHCGCHLKMSSSDRIELLIDPGTWDPMDEDMVSLDPIEFNSEEE 301

Query: 362 --------------------------------------QAFVGSM---------RKLEEA 369
                                                 Q   GSM         R +E A
Sbjct: 302 PYKDRIDSYQRKTGLTEAVQTGTGKLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIEYA 361

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BLAST of CmoCh17G005120 vs. ExPASy Swiss-Prot
Match: B1A944 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Carica papaya OX=3649 GN=accD PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.2e-34
Identity = 148/390 (37.95%), Postives = 174/390 (44.62%), Query Frame = 0


Query: 115 GELSVRLSTVDDLVGRHSV---VSDDTFLVRDSNSCGSYSIYLDSANLILLEIDNDPSFF 174
           GE S   S VD LVG   +   +SDDTFLVRDSN   SYSIY D  N    EIDND SF 
Sbjct: 55  GESSSYYSNVDHLVGAKDIRNFISDDTFLVRDSNR-DSYSIYFDIEN-NNFEIDNDHSFL 114

Query: 175 LE--------PSSTYKKNLSKSDERDYDRYIDDTKYSWNNHINALTVILGLKSVWILTVS 234
            E         +S+Y  N SKSD+  YD Y+ DTKYSW NHIN+         + I +  
Sbjct: 115 SELESFFYSYRNSSYMNNRSKSDDPHYDPYMYDTKYSWTNHINSCIDSYLRSQICIDSSI 174

Query: 235 VSESD------VYSEIWGSGANSSESESSSIRTSTDGSDLTRTESDISSD---------- 294
           +S SD      +Y+ I      SSESE+S+IRT+T+ SDLT  ES    D          
Sbjct: 175 LSGSDNYNDSYIYNYICSESGKSSESENSNIRTNTNRSDLTIKESSNDLDITQKYRHLWV 234

Query: 295 -----------------------------TSSS---------------TESSISSDTPQM 354
                                         SSS                E+ +S D  + 
Sbjct: 235 QCENCYGLNYKKFLKSKMNICEQCGYYLKMSSSDRIELLVDPGTWNPMDENMVSLDPIEF 294

Query: 355 ELK----------------------------------------QAFVGSM---------R 369
             +                                        Q   GSM         R
Sbjct: 295 HSEEEPYKDRIDSYQRKTGLTEAVQTGTGQLNGIPIALGVMDFQFMGGSMGSVVGEKITR 354

[Close]

BLAST of CmoCh17G005120 vs. ExPASy Swiss-Prot
Match: Q68RZ7 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Panax ginseng OX=4054 GN=accD PE=3 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 2.3e-33
Identity = 142/377 (37.67%), Postives = 166/377 (44.03%), Query Frame = 0


Query: 122 STVDDLVGRHSV---VSDDTFLVRDSNSCGSYSIYLDSANLILLEIDN--------DPSF 181
           S VD L G   +   +SD+TFLVRDSN   SYSIY D  N I  EIDN        + SF
Sbjct: 61  SNVDHLFGVKDIRNFISDETFLVRDSNG-NSYSIYFDIENHI-FEIDNGHSFQSELESSF 120

Query: 182 FLEPSSTYKKNLSKSDERDYDRYIDDTKYSWNNHINALTVILGLKSVWILTVSVSESDVY 241
           +   +S+Y+ N S SD+  YD Y+ DT+YSWNN+IN+         ++I T  VS SD Y
Sbjct: 121 YSYQNSSYRNNGSNSDDPHYDHYMYDTQYSWNNNINSCIDNYLQSQIFIETDIVSGSDNY 180

Query: 242 SEIWGSGANSSESESSSIRTSTDGSDLTRTESDISSDT---------------------- 301
           S  +   +   E   S IRT TDGSDLT  ES    D                       
Sbjct: 181 SNSYIYSSICGEIAGSGIRTRTDGSDLTIRESSNDLDVTQKYRHLWVQCENCYGLNYKKS 240

Query: 302 -----------------SSS---------------TESSISSD----------------- 361
                            SSS                E  +S D                 
Sbjct: 241 FKSKMNLCEQCGYHLKMSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRVDS 300

Query: 362 ----TPQMELKQAFVGSM----------------------------RKLEEAWKK----- 369
               T   E  Q  +G +                            R +E A KK     
Sbjct: 301 YQRKTGLTEAVQTGIGQLNSIPVAIGVMDFQFMGGSMGSVVGEKITRLIEYATKKFLPLI 360

[Close]

BLAST of CmoCh17G005120 vs. ExPASy Swiss-Prot
Match: A6MMV3 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Illicium oligandrum OX=145286 GN=accD PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.8e-33
Identity = 141/376 (37.50%), Postives = 166/376 (44.15%), Query Frame = 0


Query: 118 SVRLSTVDDLVGRH---SVVSDDTFLVRDSNSCGSYSIYLDSANLILLEIDNDPSFFLEP 177
           S   S VD L G     S +SDDTFLVRDSN   SYS+Y D  N I  EI ND  F  E 
Sbjct: 57  SYSCSNVDHLFGVRDIWSFISDDTFLVRDSNG-DSYSVYFDIENQI-FEIHNDSYFLSEL 116

Query: 178 SSTYKKNLS------------KSDERDYDRYIDDTKYSWNNHINALTVILGLKSVWILTV 237
            S +   L+            KS  R+YDRY+ DT+YSWNNHIN+      + S     +
Sbjct: 117 ESAFSSYLNKRSFSSYLNSGPKSYNRNYDRYMYDTQYSWNNHINSC-----IDSYLHSEI 176

Query: 238 SVSESDVYSEIWGSGANSSESESSSIRTSTDGSDL------------------------- 297
           S+ +SD+YS I     + S+SESSSIRTS +GSD                          
Sbjct: 177 SI-DSDIYSYICSESLSGSDSESSSIRTSINGSDFDINTKYGRLWVQCENCYGLNYQKFF 236

Query: 298 -------------------TRTESDISSDT-SSSTESSISSD------------------ 357
                               R E  I   T     E  IS D                  
Sbjct: 237 RSKMNICERCGYYLKMSSSDRIELSIDPGTWDPMDEDMISMDPIEFHSEEEPYRDRIDFF 296

Query: 358 ---TPQMELKQAFVGSM----------------------------RKLEEAWKK------ 369
              T   E  Q  +G +                            R +E A  +      
Sbjct: 297 QRTTGLTEAVQTGIGQLNGIPIAIGVMDFQFMGGSMGSVVGEKITRLIECATNRSLPVII 356

[Close]

BLAST of CmoCh17G005120 vs. ExPASy TrEMBL
Match: A0A2N9H1H6 (Cytochrome f OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27470 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.4e-49
Identity = 190/529 (35.92%), Postives = 237/529 (44.80%), Query Frame = 0


Query: 23  LRGGFTANTSLAHYCRDNGLLLHIHRAMDAVIHRQKNHGL-------------------- 82
           L GGFTANTSLAHYCRDNGLLLHIHRAM AVI RQKNHG+                    
Sbjct: 277 LTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHSG 336

Query: 83  ---------------------------------------------LSVASGGIHVWDMPA 142
                                                        L VASGGIHVW MPA
Sbjct: 337 TVVGKLEGEREITLGFVDLLRDDYIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPA 396

Query: 143 LTEM---EMIL-----------GNGPCAVANRVALEGCVQARNEGRDLAREGELSVRLST 202
           LTE+   + +L           GN P AVANRVALE CVQARNEGRDLAREG   +R ++
Sbjct: 397 LTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIREAS 456

Query: 203 --VDDLVGRHSVVSDDTFLVRDSNSCGS-YSIYLDSANLILLE---IDNDPSFFLEPSST 262
               +L     V  +  F     ++      + +D      ++   +  DP  F     +
Sbjct: 457 KWSPELAAACEVWKEIKFEFPAMDTFSDRIELSIDPGTWAPMDEEMVSVDPIEFQLEEES 516

Query: 263 YKKNLSKSDERDYDRYIDDTKYSWNNHINALTVILGLKSVWILTVSVSESDVYSEIWGSG 322
           YK  +   D       + +   +    +N + + +G+     +  S+             
Sbjct: 517 YKDRI---DSYQRKTGLTEAVQTGTGQLNRIPIAIGVMDFEFMGGSMG------------ 576

Query: 323 ANSSESESSSIRTSTDGSDLTRTESDISSDTSSSTESSISSDTPQMELKQAFVGSMRKLE 382
                        S  G  +TR             E + +   P + L  A  G      
Sbjct: 577 -------------SVVGEKITRL-----------IEYATNQFLP-LILVCASGG------ 636

Query: 383 EAWKKEGSVSLMQMAKTSSSALYDYQSNKRFFYVAILPSPTTGGVTASFGILGDIIIAEP 442
            A  +EGS+SLMQMAK  +SALYDYQSNK+ FYV+IL SPTTGGVTASFG+LGDII+AEP
Sbjct: 637 -ARIQEGSLSLMQMAKI-ASALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIILAEP 696

Query: 443 NAYITFAGKRVSLLAPSYLWCTILGNVGSGYDGLDRKEGIVSI----------------- 448
           NAYI FA                    GSGYD  DRKEGIV I                 
Sbjct: 697 NAYIAFA--------------------GSGYDRFDRKEGIVCIFRWGFPGKNRRIFLQFL 736

[Close]

BLAST of CmoCh17G005120 vs. ExPASy TrEMBL
Match: A0A6M3S711 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Trichosanthes rosthornii OX=676073 GN=accD PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-47
Identity = 170/381 (44.62%), Postives = 191/381 (50.13%), Query Frame = 0


Query: 122 STVDDLVGRHSVVSDDTFLVRDSNSCGSYSIYLDSANLILLEIDNDPSFFLE-------- 181
           STVDDLVG  + VSDDTFLVRDSNS  SYSIYLD  N I LEIDNDPSF  E        
Sbjct: 57  STVDDLVGIRNFVSDDTFLVRDSNS-SSYSIYLDIENQI-LEIDNDPSFVSELENSFYSF 116

Query: 182 PSSTYKKNLSKSDERDYDRYIDDTKYSWNNHINA-----LTVILGLKSVWILTVS--VSE 241
            +STY+ ++SKSD  +YDRY+DDTKYSWNNHIN+     L   + + S +IL+ S   S+
Sbjct: 117 RNSTYQNHVSKSDYSNYDRYMDDTKYSWNNHINSCIDSYLRAQICIDS-YILSGSHNYSD 176

Query: 242 SDVYSEIWGSGANSSESESSSIRTSTDGSDLTRTESDISSDT------------------ 301
           S +YS I G G NSSESESSSIRTSTDGSDLTRTES    D                   
Sbjct: 177 SYIYSYICGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQKYRHLWVQCENCYGLN 236

Query: 302 ---------------------SSSTESSISSD---------------------------- 361
                                SSS    +S D                            
Sbjct: 237 YKKFLKSKMNICEQCGYHLKMSSSDRIELSIDPGTWDPMDEDMVSLDPIEFHSEEEPYKD 296

Query: 362 --------TPQMELKQAFVGSM----------------------------RKLEEAWK-- 369
                   T   E  Q   G +                            R +E A    
Sbjct: 297 RIDSYQRKTGLTEAIQTGTGKLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIEYATNQF 356

[Close]

BLAST of CmoCh17G005120 vs. ExPASy TrEMBL
Match: A0A7J6DRG2 (Cytochrome f OS=Cannabis sativa OX=3483 GN=F8388_000245 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.0e-47
Identity = 202/580 (34.83%), Postives = 247/580 (42.59%), Query Frame = 0


Query: 23  LRGGFTANTSLAHYCRDNGLLLHIHRAMDAVIHRQKNHGL-------------------- 82
           L GGFTANTSLAHYCRDNGLLLHIHRAM AVI RQKNHG+                    
Sbjct: 259 LTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHSG 318

Query: 83  ---------------------------------------------LSVASGGIHVWDMPA 142
                                                        L VASGGIHVW MPA
Sbjct: 319 TVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPA 378

Query: 143 LTEM---EMIL-----------GNGPCAVANRVALEGCVQARNEGRDLAREGELSVR--L 202
           LTE+   + +L           GN P AVANRVALE CVQARNEGRDLAREG   +R   
Sbjct: 379 LTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIREAC 438

Query: 203 STVDDLVGRHSVVSDDTFLVRDSNSCGSYSIYLDSANLILLEIDNDPSFFLEPSSTYKKN 262
               +L     V  +  F               ++ + ++LE     S  +       +N
Sbjct: 439 KWSPELAAACEVWKEIKF-------------EFEAMDTLVLEYRCGLSKSINSLGDPIEN 498

Query: 263 LSKSDER---DYDRYIDDTKYSWNNHINALTVILGLKSVWI-LTVSVSESDVYSEIWGS- 322
            S ++++   D D+ I     S N++ + +  ++G+ S  I L +     D   E   S 
Sbjct: 499 TSVNEDQIRNDMDKDIPSGNDSDNSNYSNVDHLIGVSSDRIELLIDPGTWDPMDEDMVSL 558

Query: 323 --GANSSESESSSIRTSTDGSDLTRTESDISSDTSSSTESSISSDTPQMELKQAFVGSM- 382
                 SE E    R  +       TE+ + + T       ++      +     +GS+ 
Sbjct: 559 DPIEFHSEEEPYKERVDSYQRKTGLTEA-VQTGTGQLNGIPVAIGVMDFQFMGGSMGSVV 618

Query: 383 -----RKLEEAWK----------------KEGSVSLMQMAKTSSSALYDYQSNKRFFYVA 419
                R +E A                  +EGS+SLMQMAK  SSALYDYQSNK+ FYVA
Sbjct: 619 GEKITRLIEYATNQNLPLILVCASGGARMQEGSLSLMQMAKI-SSALYDYQSNKKLFYVA 678

[Close]

BLAST of CmoCh17G005120 vs. ExPASy TrEMBL
Match: A0A6H0EU01 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Trichosanthes nervifolia OX=1144448 GN=accD PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.0e-47
Identity = 169/381 (44.36%), Postives = 190/381 (49.87%), Query Frame = 0


Query: 122 STVDDLVGRHSVVSDDTFLVRDSNSCGSYSIYLDSANLILLEIDNDPSFFLE-------- 181
           STVDDLVG  + VSDDTFLVRDSNS  SYSIYLD  NLI  EIDNDPSF  E        
Sbjct: 57  STVDDLVGIRNFVSDDTFLVRDSNS-SSYSIYLDIENLI-FEIDNDPSFVSELESSFYSF 116

Query: 182 PSSTYKKNLSKSDERDYDRYIDDTKYSWNNHINA-----LTVILGLKSVWILTVS--VSE 241
            +STY+ ++SKSD+  YDRY+ DTKYSWNNHIN+     L   + + S +IL+ S   S+
Sbjct: 117 RNSTYQNHVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDS-YILSGSHNYSD 176

Query: 242 SDVYSEIWGSGANSSESESSSIRTSTDGSDLTRTESDISSDT------------------ 301
           S +YS I G G NSSESESSSIRTSTDGSDLTRTES    D                   
Sbjct: 177 SYIYSYICGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQKYRHLWVQCENCYGLN 236

Query: 302 ---------------------SSSTESSISSD---------------------------- 361
                                SSS    +S D                            
Sbjct: 237 YKKFLKSKMNICEQCGYHLKMSSSDRIELSIDPGTWDPMDEDMVSLDPIEFHSEEEPYKD 296

Query: 362 --------TPQMELKQAFVGSM----------------------------RKLEEAWK-- 369
                   T   E  Q   G +                            R +E A    
Sbjct: 297 RIDSYQRKTGLTEAIQTGTGKLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIEYATNQF 356

[Close]

BLAST of CmoCh17G005120 vs. ExPASy TrEMBL
Match: A0A6H0ES03 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=accD PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 8.5e-47
Identity = 169/381 (44.36%), Postives = 190/381 (49.87%), Query Frame = 0


Query: 122 STVDDLVGRHSVVSDDTFLVRDSNSCGSYSIYLDSANLILLEIDNDPSFFLE-------- 181
           STVDDLVG  + VSDDTFLVRDSNS  SYSIYLD  N I LEIDNDPSF  E        
Sbjct: 57  STVDDLVGIRNFVSDDTFLVRDSNS-SSYSIYLDIENQI-LEIDNDPSFVSELENSFYSF 116

Query: 182 PSSTYKKNLSKSDERDYDRYIDDTKYSWNNHINA-----LTVILGLKSVWILTVS--VSE 241
            +STY+ ++SKSD+  YDRY+ DTKYSWNNHIN+     L   + + S +IL+ S   S+
Sbjct: 117 RNSTYQNHVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDS-YILSGSHNYSD 176

Query: 242 SDVYSEIWGSGANSSESESSSIRTSTDGSDLTRTESDISSDT------------------ 301
           S +YS I G G NSSESESSSIRTSTDGSDLTRTES    D                   
Sbjct: 177 SYIYSYICGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQKYRHLWVQCENCYGLN 236

Query: 302 ---------------------SSSTESSISSD---------------------------- 361
                                SSS    +S D                            
Sbjct: 237 YKKFLKSKMNICEQCGYHLKMSSSDRIELSIDPGTWDPMDEDMVSLDPIEFHSEEEPYKD 296

Query: 362 --------TPQMELKQAFVGSM----------------------------RKLEEAWK-- 369
                   T   E  Q   G +                            R +E A    
Sbjct: 297 RIDSYQRKTGLTEAIQTGTGKLNGIPIAIGVMDFQFMGGSMGSVVGEKITRLIEYATNQF 356

[Close]

BLAST of CmoCh17G005120 vs. TAIR 10
Match: ATCG00490.1 (ribulose-bisphosphate carboxylases )

HSP 1 Score: 120.6 bits (301), Expect = 3.3e-27
Identity = 79/177 (44.63%), Postives = 85/177 (48.02%), Query Frame = 0


Query: 23  LRGGFTANTSLAHYCRDNGLLLHIHRAMDAVIHRQKNHGL-------------------- 82
           L GGFTANTSL+HYCRDNGLLLHIHRAM AVI RQKNHG+                    
Sbjct: 270 LTGGFTANTSLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHAG 329

Query: 83  ---------------------------------------------LSVASGGIHVWDMPA 121
                                                        L VASGGIHVW MPA
Sbjct: 330 TVVGKLEGDRESTLGFVDLLRDDYVEKDRSRGIFFTQDWVSLPGVLPVASGGIHVWHMPA 389

[Close]

BLAST of CmoCh17G005120 vs. TAIR 10
Match: ATCG00500.1 (acetyl-CoA carboxylase carboxyl transferase subunit beta )

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-22
Identity = 124/375 (33.07%), Postives = 159/375 (42.40%), Query Frame = 0


Query: 122 STVDDLVGRHSV---VSDDTFLVRDSNSCGSYSIYLDSANLILLEIDNDPS-----FFLE 181
           + VD LV    +   +SDDTF VRDSN   SYSI+ D    I  EIDND S     F+  
Sbjct: 64  NNVDLLVSSKDIRNFISDDTFFVRDSNK-NSYSIFFDKKKKI-FEIDNDFSDLEKFFYSY 123

Query: 182 PSSTYKKNLSKSD-ERDYDRYIDDTKYSWNNHINAL------TVILGLKSVWILTVSVSE 241
            SS+Y  N SK D +  YD YI DTKY+  NHIN+       + I    +  I + + +E
Sbjct: 124 CSSSYLNNRSKGDNDLHYDPYIKDTKYNCTNHINSCIDSYFRSYICIDNNFLIDSNNFNE 183

Query: 242 SDVYSEIWGSGANSSESESSSIRTSTDGSDL----------------------------- 301
           S +Y+ I        ES++  IRT+ + S+L                             
Sbjct: 184 SYIYNFICSESGKIRESKNYKIRTNRNRSNLISSKDFDITQNYNQLWIQCDNCYGLMYKK 243

Query: 302 ------------------TRTESDISSDT-SSSTESSISSDTPQMELKQ----------- 361
                              R E  I   T +   E  +S+D  +   K+           
Sbjct: 244 VKMNVCEQCGHYLKMSSSERIELSIDPGTWNPMDEDMVSADPIKFHSKEEPYKNRIDSAQ 303

Query: 362 ----------------------------AFVGS----------MRKLEEAWK-------- 369
                                        F+G            R +E A          
Sbjct: 304 KTTGLTDAVQTGTGQLNGIPVALGVMDFRFMGGSMGSVVGEKITRLIEYATNQCLPLILV 363

[Close]

BLAST of CmoCh17G005120 vs. TAIR 10
Match: ATCG00520.1 (unfolded protein binding )

HSP 1 Score: 63.9 bits (154), Expect = 3.7e-10
Identity = 36/66 (54.55%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 370 LLAPSYLWCTILGNVGSGYDGLDRKEGIVSI-----------------LGDIQSIRIEVK 419
           L    YLWCTIL NVGSGYD  DRKEGIV I                 + DIQSIRIEVK
Sbjct: 74  LFISCYLWCTILWNVGSGYDLFDRKEGIVRIFRWGFPGKSRRIFLRFFMKDIQSIRIEVK 133

The following BLAST results are available for this feature:

BLAST of CmoCh17G005120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD80	1.4e-41	38.31	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
Q09X08	4.2e-35	38.44	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
B1A944	1.2e-34	37.95	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
Q68RZ7	2.3e-33	37.67	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
A6MMV3	8.8e-33	37.50	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]

BLAST of CmoCh17G005120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9H1H6	2.4e-49	35.92	Cytochrome f OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27470 PE=3 SV=1	[more]
A0A6M3S711	1.3e-47	44.62	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
A0A7J6DRG2	5.0e-47	34.83	Cytochrome f OS=Cannabis sativa OX=3483 GN=F8388_000245 PE=3 SV=1	[more]
A0A6H0EU01	5.0e-47	44.36	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
A0A6H0ES03	8.5e-47	44.36	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]

BLAST of CmoCh17G005120 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00490.1	3.3e-27	44.63	ribulose-bisphosphate carboxylases	[more]
ATCG00500.1	1.4e-22	33.07	acetyl-CoA carboxylase carboxyl transferase subunit beta	[more]
ATCG00520.1	3.7e-10	54.55	unfolded protein binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000438	Acetyl-CoA carboxylase carboxyl transferase, beta subunit	PRINTS	PR01070	ACCCTRFRASEB	coord: 334..351 score: 79.71 coord: 363..374 score: 45.29 coord: 295..313 score: 52.17
IPR000685	Ribulose bisphosphate carboxylase, large subunit, C-terminal	PFAM	PF00016	RuBisCO_large	coord: 24..62 e-value: 5.1E-8 score: 32.5
None	No IPR available	GENE3D	3.90.226.10		coord: 298..371 e-value: 1.0E-14 score: 56.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 427..448
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 431..448
None	No IPR available	PANTHER	PTHR42995:SF5	ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA, CHLOROPLASTIC	coord: 144..368
None	No IPR available	PANTHER	PTHR42995	FAMILY NOT NAMED	coord: 144..368
IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	GENE3D	3.20.20.110		coord: 20..64 e-value: 4.2E-8 score: 34.4
IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	SUPERFAMILY	51649	RuBisCo, C-terminal domain	coord: 21..116
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 302..368

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G005120.1	CmoCh17G005120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0009317	acetyl-CoA carboxylase complex
molecular_function	GO:0003989	acetyl-CoA carboxylase activity
molecular_function	GO:0000287	magnesium ion binding