CmoCh17G004950 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G004950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor ERF039-like
Location	Cmo_Chr17: 3914971 .. 3915543 (-)
RNA-Seq Expression	CmoCh17G004950
Synteny	CmoCh17G004950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCACAACCTCCCACCATTCCGCCACCGTTTCCTCCGCCGTAACCTGCCGGAAAAGGCGGAGGACCTTAACCGAAGAATCAACCCCCAAATTCAGAGGAGTTCGCCTGAGAGCATGGGGGAAATGGGTGTCGGAAATAAGAGAGCCAAGGAAGAAATCAAGAATATGGCTCGGAACATACCCCACGGCCGAGATGGCAGCGCGTGCACACGACGTGGCTGCACTTGCCATCAAAGGCCACCGCGCCTTCCTCAATTTCCCTCAAATCAAACACCAACTCCCCCGCCCAGCCTCCCTTTCCGCCAAGGACATTCAGGCCGCCGCCGCACAGGCCGCCGCCCTCAAACACCAGCCAAACCCCACCGAATCAAGTCCCTCGGAAACGACGTCGTGTGAGGAAGAAGACACATGGTTTGATCTGCCGGATCTTGTTGTACGAGGAATAAACGATGGGTTCTTGTTGGATTTTGATTATTCGTCGTCTTCGTCGTCATCATCATGGCACTTCTCCGGAGATCACGACGACCTCCAATGGCACTCCGATTATGCTCATACCATTTTTCCCGCTTGA

mRNA sequence

ATGACCACAACCTCCCACCATTCCGCCACCGTTTCCTCCGCCGTAACCTGCCGGAAAAGGCGGAGGACCTTAACCGAAGAATCAACCCCCAAATTCAGAGGAGTTCGCCTGAGAGCATGGGGGAAATGGGTGTCGGAAATAAGAGAGCCAAGGAAGAAATCAAGAATATGGCTCGGAACATACCCCACGGCCGAGATGGCAGCGCGTGCACACGACGTGGCTGCACTTGCCATCAAAGGCCACCGCGCCTTCCTCAATTTCCCTCAAATCAAACACCAACTCCCCCGCCCAGCCTCCCTTTCCGCCAAGGACATTCAGGCCGCCGCCGCACAGGCCGCCGCCCTCAAACACCAGCCAAACCCCACCGAATCAAGTCCCTCGGAAACGACGTCGTGTGAGGAAGAAGACACATGGTTTGATCTGCCGGATCTTGTTGTACGAGGAATAAACGATGGGTTCTTGTTGGATTTTGATTATTCGTCGTCTTCGTCGTCATCATCATGGCACTTCTCCGGAGATCACGACGACCTCCAATGGCACTCCGATTATGCTCATACCATTTTTCCCGCTTGA

Coding sequence (CDS)

ATGACCACAACCTCCCACCATTCCGCCACCGTTTCCTCCGCCGTAACCTGCCGGAAAAGGCGGAGGACCTTAACCGAAGAATCAACCCCCAAATTCAGAGGAGTTCGCCTGAGAGCATGGGGGAAATGGGTGTCGGAAATAAGAGAGCCAAGGAAGAAATCAAGAATATGGCTCGGAACATACCCCACGGCCGAGATGGCAGCGCGTGCACACGACGTGGCTGCACTTGCCATCAAAGGCCACCGCGCCTTCCTCAATTTCCCTCAAATCAAACACCAACTCCCCCGCCCAGCCTCCCTTTCCGCCAAGGACATTCAGGCCGCCGCCGCACAGGCCGCCGCCCTCAAACACCAGCCAAACCCCACCGAATCAAGTCCCTCGGAAACGACGTCGTGTGAGGAAGAAGACACATGGTTTGATCTGCCGGATCTTGTTGTACGAGGAATAAACGATGGGTTCTTGTTGGATTTTGATTATTCGTCGTCTTCGTCGTCATCATCATGGCACTTCTCCGGAGATCACGACGACCTCCAATGGCACTCCGATTATGCTCATACCATTTTTCCCGCTTGA

Protein sequence

MTTTSHHSATVSSAVTCRKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPNPTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFDYSSSSSSSSWHFSGDHDDLQWHSDYAHTIFPA

Homology

[Close]

BLAST of CmoCh17G004950 vs. ExPASy Swiss-Prot
Match: Q9SUK8 (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 GN=ERF039 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.9e-35
Identity = 82/134 (61.19%), Postives = 95/134 (70.90%), Query Frame = 0


Query: 30  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 89
           P FRGVR+R WGKWVSEIREPRKKSRIWLGT+ T EMAARAHDVAALAIKG  A LNFP+
Sbjct: 38  PNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPE 97

Query: 90  IKHQLPRPASLSAKDIQAAAAQAAALKHQPNPTESSPSETTSCEEEDTWFDLPDLVV--- 149
           + + LPRPAS   KDIQ AAA AAA+  +  P   S + T+S   +D + DLPDL++   
Sbjct: 98  LAYHLPRPASADPKDIQEAAAAAAAVDWKA-PESPSSTVTSSPVADDAFSDLPDLLLDVN 157

Query: 150 -RGINDGFLLDFDY 160
               NDGF   F Y
Sbjct: 158 DHNKNDGFWDSFPY 170

[Close]

BLAST of CmoCh17G004950 vs. ExPASy Swiss-Prot
Match: Q9ZQP3 (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 GN=ERF038 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.2e-33
Identity = 85/153 (55.56%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 30  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 89
           P FRGVR+R WGKWVSEIREP+KKSRIWLGT+ TAEMAARAHDVAALAIKG  A LNFP+
Sbjct: 43  PNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPE 102

Query: 90  IKHQLPRPASLSAKDIQAAAAQAAAL----------KHQPNPTESSPSETTSCE-EEDTW 149
           + + LPRPAS   KDIQAAAA AAA              P+PT +  S        +D +
Sbjct: 103 LAYHLPRPASADPKDIQAAAAAAAAAVAIDMDVETSSPSPSPTVTETSSPAMIALSDDAF 162

Query: 150 FDLPDLVVRGIN---DGFLLDFDYSSSSSSSSW 169
            DLPDL++  +N   DGF   F Y     S S+
Sbjct: 163 SDLPDLLL-NVNHNIDGFWDSFPYEEPFLSQSY 194

[Close]

BLAST of CmoCh17G004950 vs. ExPASy Swiss-Prot
Match: Q9M210 (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 GN=ERF035 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.3e-33
Identity = 95/209 (45.45%), Postives = 123/209 (58.85%), Query Frame = 0


Query: 3   TTSHHSATVSSAVTCRKRRRTLTEE--STPKFRGVRLRAWGKWVSEIREPRKKSRIWLGT 62
           +TS  S    +    ++R+  ++++  +   +RGVR+R+WGKWVSEIREPRKKSRIWLGT
Sbjct: 40  STSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREPRKKSRIWLGT 99

Query: 63  YPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALK--HQ 122
           YPTAEMAARAHDVAALAIKG+  FLNFP++   LPRP S S KDIQAAA +AA     H+
Sbjct: 100 YPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAAEATTWHK 159

Query: 123 P--------------------NPTESS------PSETTSCEE---EDTWFDLPDLVVRGI 176
           P                    + T SS       SET+S ++   E+T FDLPDL   G+
Sbjct: 160 PVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEETVFDLPDLFTDGL 219

[Close]

BLAST of CmoCh17G004950 vs. ExPASy Swiss-Prot
Match: Q8LBQ7 (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 1.9e-32
Identity = 75/118 (63.56%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 19  KRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAI 78
           KRR+T   +  P +RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAI
Sbjct: 87  KRRKTNGGDKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAI 146

Query: 79  KGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPNPTESSPSETTSCEEED 137
           KG  A+LNFP++  +LPRP + S KDIQAAA+  AA+  Q +  + S SE     E +
Sbjct: 147 KGTTAYLNFPKLAGELPRPVTNSPKDIQAAAS-LAAVNWQDSVNDVSNSEVAEIVEAE 203

[Close]

BLAST of CmoCh17G004950 vs. ExPASy Swiss-Prot
Match: Q52QU1 (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.5e-31
Identity = 89/177 (50.28%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 5   SHHSATVSSAVTCRKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTA 64
           SH S T  S+    K+++  T+E    +RG R+R+WGKWVSEIREPRKKSRIWLGT+PTA
Sbjct: 4   SHGSDTECSS----KKKKEKTKEK-GVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTA 63

Query: 65  EMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPNP--- 124
           EMAARAHDVAAL+IKG  A LNFP++   LPRP SLS +DIQAAAA+AA +  +  P   
Sbjct: 64  EMAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHL 123

Query: 125 -TESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFDYSSSSSSSSWHFSGDHDDL 178
             +S+P + T C+ E         + +  +         SSSSSSSS   SG+  D+
Sbjct: 124 QDDSTPLQ-TRCDTEK--------IEKWSSSSSSASSSSSSSSSSSSSMLSGELGDI 166

[Close]

BLAST of CmoCh17G004950 vs. ExPASy TrEMBL
Match: A0A6J1H7L4 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=3662 GN=LOC111460308 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 3.9e-102
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MTTTSHHSATVSSAVTCRKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGT 60
           MTTTSHHSATVSSAVTCRKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGT
Sbjct: 1   MTTTSHHSATVSSAVTCRKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGT 60

Query: 61  YPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPN 120
           YPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPN
Sbjct: 61  YPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPN 120

Query: 121 PTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFDYSSSSSSSSWHFSGDHDDLQWH 180
           PTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFDYSSSSSSSSWHFSGDHDDLQWH
Sbjct: 121 PTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFDYSSSSSSSSWHFSGDHDDLQWH 180

Query: 181 SDYAHTIFPA 191
           SDYAHTIFPA
Sbjct: 181 SDYAHTIFPA 190

[Close]

BLAST of CmoCh17G004950 vs. ExPASy TrEMBL
Match: A0A6J1I9W3 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661 GN=LOC111472927 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 2.8e-100
Identity = 189/191 (98.95%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 1   MTTTSHHSATVSSAVTCRKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGT 60
           MTTTSHHSATVSSAVTCRKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGT
Sbjct: 1   MTTTSHHSATVSSAVTCRKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGT 60

Query: 61  YPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPN 120
           YPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPN
Sbjct: 61  YPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPN 120

Query: 121 PTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFDY-SSSSSSSSWHFSGDHDDLQW 180
           PTESSPSETTSCEEE+TWFDLPDLVVRGINDGFLLDFDY SSSSSSSSWHFSGDHDDLQW
Sbjct: 121 PTESSPSETTSCEEEETWFDLPDLVVRGINDGFLLDFDYSSSSSSSSSWHFSGDHDDLQW 180

Query: 181 HSDYAHTIFPA 191
           HSDYAHTIFPA
Sbjct: 181 HSDYAHTIFPA 191

[Close]

BLAST of CmoCh17G004950 vs. ExPASy TrEMBL
Match: A0A0A0KAN0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G104640 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.3e-65
Identity = 151/215 (70.23%), Postives = 162/215 (75.35%), Query Frame = 0


Query: 1   MTTTSHHSATVSSAVTC-----RKRRRTLT----------EESTPKFRGVRLRAWGKWVS 60
           MTT SHHS T SSAV+C     RKR+R+ T          E STPKFRGVRLRAWGKWVS
Sbjct: 1   MTTNSHHSTTSSSAVSCLTATSRKRQRSSTSSATESESDQESSTPKFRGVRLRAWGKWVS 60

Query: 61  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDI 120
           EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ+KHQLPRPASLSAKDI
Sbjct: 61  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASLSAKDI 120

Query: 121 QAAAAQAAALKHQP-NPTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFD------ 180
           QAAAAQAAALKH+P  PT          EEE TWFDLPDL+V   ++GFLL  D      
Sbjct: 121 QAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIV---SNGFLLGLDENYSSS 180

Query: 181 -YSSSSSSSSWHF-SGDHDD--LQWHSDYAHTIFP 190
             SSSSSSSSW F   DH+D   QWHSD++HTIFP
Sbjct: 181 CSSSSSSSSSWQFLVDDHEDNHFQWHSDFSHTIFP 212

[Close]

BLAST of CmoCh17G004950 vs. ExPASy TrEMBL
Match: A0A5A7TVV7 (Ethylene-responsive transcription factor ERF039-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73575G00010 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65
Identity = 148/208 (71.15%), Postives = 159/208 (76.44%), Query Frame = 0


Query: 1   MTTTSHHSATVSSAVTCRKRRRTLT----------EESTPKFRGVRLRAWGKWVSEIREP 60
           MTT SHHS T SSA T RKR+R+ T          E STPKFRGVRLR WGKWVSEIREP
Sbjct: 1   MTTNSHHSTTSSSATTSRKRQRSSTSSATESESDQEISTPKFRGVRLRTWGKWVSEIREP 60

Query: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAA 120
           RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ+KHQLPRPASLSAKDIQAAAA
Sbjct: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASLSAKDIQAAAA 120

Query: 121 QAAALKHQPNPTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFD------YSSSSS 180
           QAAALKH+P    S   E    EEE TWFDLPDL+V   ++GFLL  D       SSSSS
Sbjct: 121 QAAALKHEPETATSCRGE----EEESTWFDLPDLIV---SNGFLLGLDENYSSSCSSSSS 180

Query: 181 SSSWHF-SGDHDD--LQWHSDYAHTIFP 190
           S+SW F   DH+D   QWHSD++HTIFP
Sbjct: 181 STSWQFLVDDHEDNHFQWHSDFSHTIFP 201

[Close]

BLAST of CmoCh17G004950 vs. ExPASy TrEMBL
Match: A0A1S3CBH6 (ethylene-responsive transcription factor ERF039-like OS=Cucumis melo OX=3656 GN=LOC103499073 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65
Identity = 148/208 (71.15%), Postives = 159/208 (76.44%), Query Frame = 0


Query: 1   MTTTSHHSATVSSAVTCRKRRRTLT----------EESTPKFRGVRLRAWGKWVSEIREP 60
           MTT SHHS T SSA T RKR+R+ T          E STPKFRGVRLR WGKWVSEIREP
Sbjct: 1   MTTNSHHSTTSSSATTSRKRQRSSTSSATESESDQEISTPKFRGVRLRTWGKWVSEIREP 60

Query: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAA 120
           RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ+KHQLPRPASLSAKDIQAAAA
Sbjct: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASLSAKDIQAAAA 120

Query: 121 QAAALKHQPNPTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFD------YSSSSS 180
           QAAALKH+P    S   E    EEE TWFDLPDL+V   ++GFLL  D       SSSSS
Sbjct: 121 QAAALKHEPETATSCRGE----EEESTWFDLPDLIV---SNGFLLGLDENYSSSCSSSSS 180

Query: 181 SSSWHF-SGDHDD--LQWHSDYAHTIFP 190
           S+SW F   DH+D   QWHSD++HTIFP
Sbjct: 181 STSWQFLVDDHEDNHFQWHSDFSHTIFP 201

[Close]

BLAST of CmoCh17G004950 vs. TAIR 10
Match: AT4G16750.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 6.3e-36
Identity = 82/134 (61.19%), Postives = 95/134 (70.90%), Query Frame = 0


Query: 30  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 89
           P FRGVR+R WGKWVSEIREPRKKSRIWLGT+ T EMAARAHDVAALAIKG  A LNFP+
Sbjct: 38  PNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPE 97

Query: 90  IKHQLPRPASLSAKDIQAAAAQAAALKHQPNPTESSPSETTSCEEEDTWFDLPDLVV--- 149
           + + LPRPAS   KDIQ AAA AAA+  +  P   S + T+S   +D + DLPDL++   
Sbjct: 98  LAYHLPRPASADPKDIQEAAAAAAAVDWKA-PESPSSTVTSSPVADDAFSDLPDLLLDVN 157

Query: 150 -RGINDGFLLDFDY 160
               NDGF   F Y
Sbjct: 158 DHNKNDGFWDSFPY 170

[Close]

BLAST of CmoCh17G004950 vs. TAIR 10
Match: AT2G35700.1 (ERF family protein 38 )

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34
Identity = 85/153 (55.56%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 30  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 89
           P FRGVR+R WGKWVSEIREP+KKSRIWLGT+ TAEMAARAHDVAALAIKG  A LNFP+
Sbjct: 43  PNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPE 102

Query: 90  IKHQLPRPASLSAKDIQAAAAQAAAL----------KHQPNPTESSPSETTSCE-EEDTW 149
           + + LPRPAS   KDIQAAAA AAA              P+PT +  S        +D +
Sbjct: 103 LAYHLPRPASADPKDIQAAAAAAAAAVAIDMDVETSSPSPSPTVTETSSPAMIALSDDAF 162

Query: 150 FDLPDLVVRGIN---DGFLLDFDYSSSSSSSSW 169
            DLPDL++  +N   DGF   F Y     S S+
Sbjct: 163 SDLPDLLL-NVNHNIDGFWDSFPYEEPFLSQSY 194

[Close]

BLAST of CmoCh17G004950 vs. TAIR 10
Match: AT3G60490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 5.9e-34
Identity = 95/209 (45.45%), Postives = 123/209 (58.85%), Query Frame = 0


Query: 3   TTSHHSATVSSAVTCRKRRRTLTEE--STPKFRGVRLRAWGKWVSEIREPRKKSRIWLGT 62
           +TS  S    +    ++R+  ++++  +   +RGVR+R+WGKWVSEIREPRKKSRIWLGT
Sbjct: 40  STSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREPRKKSRIWLGT 99

Query: 63  YPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALK--HQ 122
           YPTAEMAARAHDVAALAIKG+  FLNFP++   LPRP S S KDIQAAA +AA     H+
Sbjct: 100 YPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAAEATTWHK 159

Query: 123 P--------------------NPTESS------PSETTSCEE---EDTWFDLPDLVVRGI 176
           P                    + T SS       SET+S ++   E+T FDLPDL   G+
Sbjct: 160 PVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEETVFDLPDLFTDGL 219

[Close]

BLAST of CmoCh17G004950 vs. TAIR 10
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33
Identity = 75/118 (63.56%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 19  KRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAI 78
           KRR+T   +  P +RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAI
Sbjct: 87  KRRKTNGGDKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAI 146

Query: 79  KGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPNPTESSPSETTSCEEED 137
           KG  A+LNFP++  +LPRP + S KDIQAAA+  AA+  Q +  + S SE     E +
Sbjct: 147 KGTTAYLNFPKLAGELPRPVTNSPKDIQAAAS-LAAVNWQDSVNDVSNSEVAEIVEAE 203

[Close]

BLAST of CmoCh17G004950 vs. TAIR 10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 136.3 bits (342), Expect = 2.5e-32
Identity = 89/177 (50.28%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 5   SHHSATVSSAVTCRKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTA 64
           SH S T  S+    K+++  T+E    +RG R+R+WGKWVSEIREPRKKSRIWLGT+PTA
Sbjct: 4   SHGSDTECSS----KKKKEKTKEK-GVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTA 63

Query: 65  EMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPNP--- 124
           EMAARAHDVAAL+IKG  A LNFP++   LPRP SLS +DIQAAAA+AA +  +  P   
Sbjct: 64  EMAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHL 123

Query: 125 -TESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFDYSSSSSSSSWHFSGDHDDL 178
             +S+P + T C+ E         + +  +         SSSSSSSS   SG+  D+
Sbjct: 124 QDDSTPLQ-TRCDTEK--------IEKWSSSSSSASSSSSSSSSSSSSMLSGELGDI 166

The following BLAST results are available for this feature:

BLAST of CmoCh17G004950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUK8	8.9e-35	61.19	Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZQP3	2.2e-33	55.56	Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M210	8.3e-33	45.45	Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8LBQ7	1.9e-32	63.56	Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q52QU1	3.5e-31	50.28	Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmoCh17G004950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7L4	3.9e-102	100.00	ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1I9W3	2.8e-100	98.95	ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661...	[more]
A0A0A0KAN0	1.3e-65	70.23	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G104640 PE=...	[more]
A0A5A7TVV7	2.3e-65	71.15	Ethylene-responsive transcription factor ERF039-like protein OS=Cucumis melo var...	[more]
A0A1S3CBH6	2.3e-65	71.15	ethylene-responsive transcription factor ERF039-like OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of CmoCh17G004950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16750.1	6.3e-36	61.19	Integrase-type DNA-binding superfamily protein	[more]
AT2G35700.1	1.6e-34	55.56	ERF family protein 38	[more]
AT3G60490.1	5.9e-34	45.45	Integrase-type DNA-binding superfamily protein	[more]
AT2G44940.1	1.3e-33	63.56	Integrase-type DNA-binding superfamily protein	[more]
AT2G25820.1	2.5e-32	50.28	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 54..70 score: 66.1 coord: 32..43 score: 63.48
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 31..94 e-value: 4.0E-35 score: 132.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 30..81 e-value: 5.1E-15 score: 55.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 31..88 score: 22.892542
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 30..88 e-value: 8.06283E-32 score: 107.743
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 31..90 e-value: 2.2E-24 score: 87.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..135
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 17..168
None	No IPR available	PANTHER	PTHR31985:SF130	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043	coord: 17..168
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 31..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G004950.1	CmoCh17G004950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity