CmoCh17G004720 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G004720
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	EF-hand domain-containing protein
Location	Cmo_Chr17: 3366938 .. 3378532 (-)
RNA-Seq Expression	CmoCh17G004720
Synteny	CmoCh17G004720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACTACCATGACCCTGTAACGAAGGGTGCTGCTTATGACGCGTACCCAACACGACACTCCAATGTCTGATTCCGAGCGCAAGGAAGCTCCTAATTCTTCAAGCACTGACACAAAGAAGACGCCCAGAGGTTCCATCAGTGGCGGAGACGTCAAGGATACGCCGGAGTATGAGAAACAGAGGCTTTCTAGAATCGCCGAGAACAGGAAGAGAATGGAAGCCCTTGGATTGGCCAAATTGGCGACCTCATTTATGGATTCTTCCAAGACTCTGAGGAAGATTGATAGAAAGGGGAAGCGTAAGTTCGATGAAGATTATAATCCTGGCGAGGGTTCTTCGAATTCTGAAGATGATGACTCGGAGGAAGGGGATGAAGGTTTTGGAAGTGGGAAAGTTTCTAGGTCTCGTGGAATGAAGGTAATCTCTCTCCATTTTCTGTCATTGTGTACTTCTACCATTGTACAAAAATTAATTTGGTGGTCGCTGCATTGTTCATGATTCAGCAATGGTCCTTAGGTTGATTCACTGGTAATTTCCTGTTGGGATCCTTAATTTTGGTTGTGTATATTATCTTAATTAAGTCGAATATTTAACAATTTGCCTGTTTCTATGTCTGTAATATCCATCAAAGATGGAGATAAATGCTGAGAGTATATATGTTTTTAAAAAGAAGACATTATTCATTGGTATGATGAAAAGATGAACTCAGTGTCACCTTTTATCTCAGTAATTAAGTCTGAGTGGAGAGTTGGCTTCATTGTTTCATTTTAGTGAAGTGGAAAATATAAGTCTTGGCCAAGGAGTTGAGGGAGCCTTTCTCCCTTCAGAATTGGGGAAGAACCTATTGATGTCAGAAGCTTTGGAAAAGAATTAGAGCTTGAAGGAGTTTTTTAGTTGTTTTGTTTTTTCTTTGAAAGAAAAAAAGTCGAACAAATTTTGGTTCAATTTTAAATGAAAAGAATGAGAAATAGATCAAAGGAGCGGGAGGGGGGATTGAAGAAGTAGATAAGAGGGCTTTCTGGGTTTGTGGAGGATACACATCTAGGTTTTTGGGAGTCTTCCATTGGCCTTTGTATTCTTTCTTTTGAGGTTTTTGGTGGATTACCAAATCAAGTATGCCAAAAACATTGTTCAGACCCACCAGCATGATTGTAACAAAGAAGTCTGGTTTGGTCTCTGTATTTAGATCAAAGAGTTTCTTTCTTTGGTTGGAAGGGATTGATGGAGAAGTACTAGCTCTCGTTCCCTTCCTACAAAGGAAAGTCGTATATCAAGTAGAGAAATGATGACTAGCGCTTTTTGTTTTCTCAAGATGGAACCAAGATTCTGTTTGTACCTCATTTGCATCCAATTTGGTAATCTCGGCCTACGAATGCCTCTTGTTTGAAAGCTTTTCAACCCATAATAGCTTGCAATAGTCAACTAACCAGGACACGGTTCCCCAGTGGAGGGTTAAGGAAAAATCATATTATCTTGTCCATATTTGATAATCCATGCTTAACTTTCTTCGTAATTTTCATCACCTCAATGGAGTAAGATTTCCTGTCAACAGAGATCGTGTGTTTTGAGTAGTTTCCAACCCATTGGAAAGAGGAGGGATCAGAAAGTAAGGAGGGAGCTTGCATTTTTGTGCAGGAAATTTCCTCGGTTATAGCTTATATGCTATTGCCTTTTTCTTTTTCTTTTTGATAAGAAACCAGAGGATAACATTAATAGCAAAAAAGGAAAAAACAACCTAAGGGTTGTAGAAAGAGAACCCCCTCATGAAGAGCTAATCACAAGAACACCTTCCAGTCATGGAGAAATATGTCACTGTCAATTGTATGCTGTATTATAACTTGAGTTGCTGAAATGGGGAACAATTTGATCTGAACTTATATTCTATCAAGAAATTGTGGTGTGGGCTAGTCTTGATGATTATCGCTTTTGCTGAAGAGTTCTGGCTCATGTACAGTCAAGTTCTTGCAATTTGACTCCAGATTCCTCAGTCTCAGGTAATTGACAGAGAACTAGCTGGCTGTGTTAAAAATTCCTAAAACAGTCGGGAGTGTTCTTTTGGGATTCAAGTCTTAACAGCATCAGCATTATGAAATGAATATAGCACAAAGGAGGAATGTCTTGTTTCATGCACCTTTTTTTCTTCTTTATGTCAATTATAAGGCAGAATGTTGAGGATGTTAACCATTTATGTTTACAATCTGAGTGGGCCTGTAGTTGTTAAAATAATTTATTTGGCTCTTATATGTGAATCAGGCGTCTCCTAGGGATATGGAGGCAACCTCTCAGGTACTTGGAGGCTTAAAGTTGGGAACGACAGGTCTTATTTTGTCACTTATTGAGTGTAAAGCTTTCCGTCGGTGTTTTTTCCTGGTGTAAAACAGTAGGATTTCTAAAAATTCCTTCAGTGAATGGATTGGTCAAATGGTTTGTTTCTAGCTCGACGCCTTCATACTACACTGTTCCCTTGGGTAAAAACGTGTGTTACTCATAGATAGATTATGAAGTCGAAGGGGAATTATTTTTGTACTTCTTTGACTAAACCATGGGCTATAGCTTATCTCCTTCCATTTTTTGCGTACTTTTTCTTTCATTTTATAGATGAAAGCCTTCTTCGTTTCCCAAAAAAAAAAAACCTACTTGTCGTTGGAAAACCACGTATTGTTTCTAGCTTCATTTCCAAGCAAAACCTTTTTTTTTTTAGTTAAATGGGGATATATATTATATTGGGGGCACTAAAAGAAGGTCAACTGTAGTCCAAACATGTATACTTTCTCTCATGGAGTTAATTGGTGGTATGAAACAAGGGCACAAATCTCTGTTTTTATTTATGTTATTGCATTTTGGTGTGTTTCATGCCTACAAGGAAGTTGTCCTGGCCAAAATATATTAAAAAGGAAAATATATCCTGCACGTTTTTTACGTACAAAGGTCCATCTATTTCAGCACATTCTAATTGGTGCAGTCTGAAAATTGTTCAAATTTTATTTCAGGGAAAGAACAGAGGTTCAAAAGCAAAAAGGAAATCTTCTGTCGAAAAATCAAATAACTTAAATGATGAAGATGATGATGCATTACAACAGGTAGATTCATAATATTCCATCGGTACTTTGTAATTCAAGACAGCACAAACAGGCTAACAATATCATATGCTTCCCAAGCAGGCGATCAAACTTTCACTACAGGATTCTGGTGAAACCTCTGATGCACAGATGCAAGGTCCTTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAATGGGAGGAGGGATGAAGAGAAAAGGATTGGTAGCCTTTTTACTCATAACGTAGTATTATAGCCTTAGTGATCCTTTATTCATCTTTTCTCTTAATTCTTTTTCTTCACATCTGAACTGCAGTTCACTAGTCGGATGCAGATGAACGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGGTATTTTATATATCTGGTATGATATTAATGCACTTTAAAGTAAGTTTTACTACTGACCTGGTGAACTTGGCTAATAGAATCATGGAAAGGGAGCATTACTGTAAGTGACCTGAAAAGAGTGGCAGCTGTTCATGATTTTACTTGGTCTGTCAAAGAATTAGAGGATATGATTAATTGCTTTGACAGTGATGGAGATGCCAAGGTTAGTTTCTTGGATTCACGCTCTCTTTTCATATTTCAATTCCATTCTCTCTTTATAAGATGAATTGTAATCTTCGTATAGTTTTCGAGTCTGAGATATATGTTCTCGATTGTTTCGTTCAAGATTCAAAATTTTTAACAATACCATCAAACTCAGCGGGGATAGGACATGACACATATTTAGTTGACTTGCTTAGAAAAAGACATCTTGACGTCAAAGACAATGATGGACATGAGAACCTTTGTATGTTTATATCTCAAACTACTGAAATATTTTTCTGAAGGAAAATTTTGTTACCAGTTGTGAATATTTGTGGCTTGTTTCCGCCGGTAAATATAGCTACTTTTATCTACCATCATGTCCAACCTATCTTGTTTGAATTAAGCTTTGTTTGATCATCCTTTCCGAGAATACGTGTCCATTTTCGTTTCCATCACAGTTAAGTATGGATGACTTTCGAAGAATTGCTAGTCGATGTAACATGATAAAGGAGTCCATTACATGACCGACGCAGATGACGACCAATGTGCGGAGGAGGATGGATATAGGAAGAATGGAAGAGGATGGCAATATCGATTGTCTCCCCCTCTGCTTTTTTCTAGAACAATCAAATGGAAGCATGCTCTTTATCCAATCATTCATCAGAAAATTATGAGGTTTGTTGCACAGAGCATCAAAACATTCTTTTTGGAAGACAAAGCTCAAACGATCATCATAAGACGAGGGAGCATAATGGCTCCGATCGATAACGATGACCAATCTTCATGATTTTGTTGAAATCCCAGGTATTGTAGAGCATTTAAACTTGTTGTCGTAATTGTGAAATTCTGATCCCATGTGTTTCAATCTTCGAGATCTGTCTTTCAATTTTGATACCCAGGTAAAAGATGTATGATTGCATTTGGCATTGTCATGGTTCCTAGATTGTGATATCCCTGCTATACTGGTTTCTTGGTTCATGTGGTTTACTAGTATTTCGGTTAATATGGTTAGAGGGCACTTATTTATGATTGAATGTTTTGGAATGCTGAATCTGCAAGATCTTTCATTCTTGTGTCGGTTTTGAAGGTTTATTACTGTAACAGCCCAAGCCTATCGCTAACAGGTTTTGTCTGTTTTGGTTTGTTACGTATCGCCGTCAGCCTCAAAGTTTTAAAACGCGTCTACTAGGGAGAGGTTTCTTCACCCTTATAAAGAATATTTCGTTAGATCTCACAATTACGTTCTTTTTTCGGTTGAATGAGATATAAAATACAAATTTGGACTCATCTTCTCTAAACGATCTCTCTGCTTTTTCGATACCGTAACGATCATTTGGCTTATAGTGGTTAGCTTTGACCATACTTTAGACATGGATTTATAGGAATTGTGGATACTTTCGAAACTGTAGCATTGAGTCTTCTGTGGAACCATATTTGACTATTTACGCAGGATTGCACCATTTAGAGGAAACTGGAAATGCCATCAGGAACTGGTTTTGCTAGAACTGCATTATTACGTTTAACATTCATTTTTCACTTTAAAACCTTAAATTTAAATATTTTTTTACAAGTTCATATTAATTAAACTTAGACCCTCTATTACAATTTTGTTTTAAAATTGTTAAACGCACAACTTTTCTACACGCGTGTGAGATTTCTTTAAATATAAAAATCGATATAAATCTTTCCCTATTACTTTCTACTTGTTTAGAAATAATTACGTTAATCGGAATAGCTATAAAATTTCGATCAATTCACATATGAAATTTTAGGAATTTTAAGGTTCTGAGTTGAACATAGTTATTAGTTTCGAATTTTAATTGATCAGGCAAAAAATTAGTTCTACCCTCTTCAAATCACTGACCAAAGCTAAACAATCTAACTCAATCCAAAGCTAGGTGAAGATCAACTTCAATGACATCCACATTTCCTCCGGTAATATTTCTTTGCCAAACAACCCTATTTTTCAAATACAATAAAGTCTCTCCATGCCCGACGGATAAGGTGAAAACATTCATTTAAAATAATTCATAAAAGGTGTCATGGATTATATAACGTTTGTAGTAGAATTTTCGAAAAAAAACAATAAAGCAAAAAAACCATAACGTGAAATTTTAAATAAATAAGAAAATTAAACAATGTCTTGAGCTAACTTAAGGACTATAAAATAGACATAAATATGACTACCCTAATACCGATTTTATGACTTTCATTGTGACACTGTCATTGTACATTAATGTCTTACCTTTACTTGGTAAATAAAAGTGGCATGTGATTTGAGTATTTTAAGAAATAGTCACTGAGTAGCCCCATTTTTGGAGTTGGAAAATACAAACATATGCAATACGGTGGGATCTATCATTTTAAAAACATCATAGCATGCCCTCAGGCGGCTTTCCGATTAGAGACAGTGTTAGATGTATAGTATTTCTTTATAACACGGTTCACGTATGCGTACATAGAAAATTGACTTACCGAAATGGCCTCGAAACGATAACATTACTTCTTGTGTGGCTTAAGTCTGTGCAATACTGGGGACGAACAATGTACATGCCCTTTTTCTTTTCTTTTTATAATTATTATATTTTTAATCTTTGTTGATTGTTACATGTAGGGTCGTTCTATTCTTGCTCGTTAACAACATTCAATTAAATATCTACAATTTTTCCCGTATGATATTCTAATATGTTCGAAGGCGTCTGGTGTGACTTATTGTAAGCGACACTCATCCCAAAAAAATTTCTCGTATGGTATCTCAATCATGGTGTGACCTATCATTTCATAAAAATATCATAGCCTTAAACTCTACTTTTTAGTCCATACAAAATTGGATGTGTAATACTTCTATACACACAGCACACGCATGCACACGTAGACCCACCAAGCGGGTTTGTATACGTATCCTTGGGACTAGCCTCCAACTAACGCACACTCACATTGTCAAAGCCACCGAGGGAAAGGAGCCCACATAGTATCATGACACACATAAATATTGTATTGTCACGTCCATACTCATCATAACGGAGAAATATCCCAATGCACATAATATACATAATGCTTGAGGTCCTATAATATCAAATCATGGCATATACTAATGATGCAAATCATATCTTCATTCTTTTCATGACATAGCATTTCTACGATACATGCATACGTATAATGAACAATCTTTCATGGTTAACATACATGACATATTGTTAGCATGACTTATCAATGTCCCTTTTCAATCTCCATTCCCACTAAATTTTTCATTTATTTTTGTCAAGATCGAGGTTGAGATTCCCCATGAAAAACTTGTAGGGATCCGATTTCCACCGAGAATTTTCTCCATCTTTTTGTATATTTTTCAAATATATATATATATATATATTTTAATTCCTATTTTTCAATATAATTTCTATTAAAAAAAATAAACCACCCTTATAAACTCAATAATATTTCTTAATTAAAAATATAATATAATATTCAATATAATTTCTAAAAACTCAAATTTTAATTTTATACACGTAAATATATATATTTGGTGAGGTTGGAACATAGATCGAGATAGGGAATAAGTCTCTCTTTAATCATGTACCATAGGATAACTTTCACACCATTTAGGTGCGGTGGATTAAGCAAACATTCTCACATACAAGCGATCGCTAAGCAATAATCGTATTGAATATCTAGAAACAAATATCTCAGATCTACCCTCCACCCATTATACAAATCATAATCTTAAACAAAATCAAGTATAAACAGCTGGTTTCTTCGAATCCTTCAAACAGAAGTGAGAAGACGAGCATCGAATTTACCTCGGCAGCATTCTTGCAAGATCAAGCTGCCTAAATCATCACATAAACTGAGGTCAGCCATAGCCATGAGCTCCTTCAGCTGGTTTCGAGTCATCACTACTTTGATCCTTAAAGGCCTCGAACAGCTTCTCAGTCCTTCGTGGCCTTCAATTGGGTGTATCACTCTTCTCTTTCCAATCCAATTCCCCATCTTCTTTGCCTCTCTCTCTCTGCTTCTCTTCTTAATTGGCGTTTGGAAACTCTCTCATAGAACACCAAAAGCTGAAGGGGATATTATCTCCATTATTTTCAGCATTAAAGATGGCAGTTGAAACTTAATTGTTCTAAGCTTTAAATTGGAGTCCCCATGACATTCAATGCATTTAATTCATTGGGTTTGTAGTTAGCAACTTAATCATCTTATGTAATTCAATTTGGGTCGGAAAAGTCCGGATGAGTTTCAACGATTACAAATGATACCAGAGTCAGGTTCCAACTGATGTGCCAATGAGGAAGCTGAGTCTCAAAGGGGGTGGACACGAAGTCGTGTGCAAGCAAACACGTTAGTCCATGAATGGGGTGAATTAGGGGGTCCCACATCAATTGGAGAATGGGACGAGTGTCAGCGAAGAGGATATTTATGAGTGAGTGTGGAAACCTCTACCTAAGAAGAGAAAAGTCCTAATAGGGTATTTATATCCATTCATGTCCATTTATCTTCAATTTAGTTTCCAACCCCTATGTAATATTCAACCTATCCGCTTCTCCCGAGTCTCGTTGATTCGATCTGATCTTAAATGTTTCAATTTAGTCATGGATCCAATTTTATTATGGTCTTAATTATAGCGGTAAACATTTTAATTCAGTCTCAATTGAACACATTTTCTATTTTTTCGACCAAGGGGTCTATATAGTTGTAGATGCTAAGTACTATCTCTAGCAATTTGCAAGATTAGTAAAGATTGTGGAAGGTTTAATTTATGCTTGGTAGCGGCGTTCATTGGTTGGGTTGGGACATTTTTCAGACCCAATCTAATTGTTTAAGTTGTAAAGTTTTTCAACTTAAATAACTCTGGTTAAATAATAAACCTAACTCGACCCAACTATAATTTTTTTTAGTTGAGTTGCTTTTGTTCAAACATTTAATTAAATTTTGTAATTCAATTTTAAAATATATTTTGAAAAATTATCTTCTAAATCGTTAAAAAAAATAATTTTTAAAAATAATTAGAAAATAAATAACAAAAAAAATATGAAATTAAATAAATAATGTATTATTGTATAACAAGCAAAAATATATATATATATATATTTCATAATTAACAATAAATTCGGGTCGGTTTAATTCAAGCAGGGAATTCATGAACAACTCATTCATAAAATTTTCATTTATTTATTTGAGCTAAACTCCCTTCTCTTTTGATTATTTTTTTCTTTTAGTGTATTTATTTAATTTAATCGTGCAACGTTAATGATCTTGACACGCTTATAACAAATTTTAAGGAAAACTCAAGTTCTATATACATTTTTTCATTCTCCACTTCACTTTGTAGCTTCGTTGGATCTTAGACGAGATTTATTTTTGTCAACAAAACATAATTCATTTGAAATTTAAGTTTGTTCGGCCACACACGCTGCTCGTGCATGCATCTTCAATTGTCTGCAACCTTAATCGACTTTGCTGTATACTAGGCTAAATCATTTGACTCGACCTTACTCCTGTAAAGTCACACATGGACTAATTTAAGGAATATTCATGAGTTTATAATCAAGAAAGAAATAGTATCTACATTTGATACGAGACCTTTTGAGAAATCACAAAGTGTTGGATGAAGGCCTCACAGACTAATTTAGGATATGACAGTAGGTTTATAGTTAAGAATATCATTTCCTTATAAATTGAGTTAATAATATTTTTTTCTTTTTTTTAAAAAAAAACCCTATCCCCTCTTTTCTTCTGCCCTTAGGTTTATCTTCAGTCGCTACCCATTTTCGCAGAAATCCATCACCAGCCCGTCTCCTTCTTCGACGTTAGCAGCTGGTCCTCCGACCAGTGATCCAGCCGCCGGCGACGAACTCGAGAAGTTTTCTTCTCTGGCGCGAGCACCTATCACGAGCCGCGACGCACAGGTCAGCAGTTGGTCCTTCGACGAACGCACGTCCACTGATTTCTCTTCCCAGGTGACATTCGGAAGCAACCCACAACCCGAATGCCTCAAATCGGATTCCCCATAACCTGTAAAAGTGAGATTTAGTTCGAACCTGTTCGAACACATTCCAGCAAAGACTAAAGCCTTGGATAGTGGGTGGGCTCTTTACGAGTTTACTAAGTGTATTAATTCTGATTCTAACTATTGGAAGTTTTTTGTATATAGGTTCGGACTGCTCGATTCAAGTTTAAGGTTGACATTGGGTAAGAAATAGCTGTCGATTAAGGTTTAAAACGGAACTTTAACCTTGAAATCTTGTCTACAATTTCTTATAGTAGCGCTTTATAACGTAAGGTAGTTCTTACTTGTGAAGTCTGTTCCTTGTTATTTTTATGATCTATAAAATTTAATTTATATGCGATTATAAACTGTTTTGGGTTCTGGTAAGTATAATTATGCTGTGTTGTTGAGTTACATCCTTGTGATGATGGATATGTTGGATGTTGAAATTTTCTGAAATTATATGATAGTATGATGCTTATGTCGGAATCTGGTTCATGTTGTTAATTTTCAGAAATATGGCTCCGAAAGCATGTTAGAATGTGCATACATGGGAATTTGTGAGACTGATTGGTGAGGGAGGGTTAGAAGACCTTAAAAGTGAGGACAGTGTCTGGGCTTTGGATATAAATGGTGGACGGTTGGTATTGTGTTATGGAAAGTAAGTGAATATCAGGCCTCAAGTATGAATGGTTAAGGATTGGTGTGTCACTATTGGGTGTCAAGGCCTGTAGTATATATGGTCGGGAGTCAACATGCCAATATTGGATAAGAGAAGTATCAAGGCCTTGGGTATAAATGCTCAAGAGCCGGTGTGATGAGCTTTTATACAAGCATTGGGGCCTTGGGTGTAAATGGTTGAGGGTTGAACGTTGCGTTTTGTAGAGAAGGGTTGAGGATTTTGGTATAAATGATCAGGAGTCAATGTGTCTTGCAAGAGTAAATCTCAAAGATGTGGAAAAGATTGAATGGAGTTAGAAAGAGCTAGAAAGAGCTATGAGAACTCAGTGATGTTCGAGAGTTTGTTAGAACTTGAGTTCGAGGATAGGCGTGCACGACATGAATATTGTGGATGATATGATTATGATTCATGAGCTGAATATGTCACATATATTTACTTGTTTTCATATTTGTTGTGAGAGCATGATGTGATGTATGTTGTATGCTGTTGGTAAAAATTGATACAACTTGCATTATAAATAGACCAATATAAATAAACCATGGGTGAAAGTATTTAAAAGTTCTTTCTCACTGAGTCAAGTATTACTATTATCAAGTTTGTTCAAGAAAGTAGAGCCATTTGTTAGATAAGAGAGTTACTAAGATGAGAATTGGGGATAAGAACTTTTCTAATCAGAACGATCCCTAGTTCATTTTTACAATGAATGTTTTCAATATCGATGTTGATGAAAATACCAAAAAAAATTGTAAATAAAGAATTCAAAAAAGAAAATTAAATTGGACTTAAGAACATAGGCATTGTTCCCTTTGTTTTTCATGCGGCTTTGTTCCTTACACTCTGCAATGATGTTGCTTAAACAGGTAACTTCGATATGATTCTCAATGGATGCACCACACCCACTGGCTTCTTCTTCTCAAATTCCAGGTTGTCTATCCCTAACCGTTCAGCGATCTCACGTAGTTCTGATTGCAGTATGCATGCTGCTGCTAGCATTAGAAGTTCAAGGGAACCTCATTTAGAGCATCAAACATGTCGCTATAGAGGTGCATACGAAGCCTTTCACAATCTTTATTCATCTTTTATTTGATCTTTTTATTGAAACAACTATAACTGGTGGAGACGTAAATGTAAAGAAATTACTGTCTGACTTTTGTGACAATTGCTTCTTGAAGTAATCCATTATTTTTCAAATGTAGGTGTCTTTCCCTTAAAACTAGGTGCTGGATCTTCCCATTTCTTAAGCGGGGATCTAGGTGGCTTGCTACATACAATCCCAAGGTTACCAAGGAAAAGAAATGTTAG

mRNA sequence

GAACTACCATGACCCTGTAACGAAGGGTGCTGCTTATGACGCGTACCCAACACGACACTCCAATGTCTGATTCCGAGCGCAAGGAAGCTCCTAATTCTTCAAGCACTGACACAAAGAAGACGCCCAGAGGTTCCATCAGTGGCGGAGACGTCAAGGATACGCCGGAGTATGAGAAACAGAGGCTTTCTAGAATCGCCGAGAACAGGAAGAGAATGGAAGCCCTTGGATTGGCCAAATTGGCGACCTCATTTATGGATTCTTCCAAGACTCTGAGGAAGATTGATAGAAAGGGGAAGCGTAAGTTCGATGAAGATTATAATCCTGGCGAGGGTTCTTCGAATTCTGAAGATGATGACTCGGAGGAAGGGGATGAAGGTTTTGGAAGTGGGAAAGTTTCTAGGTCTCGTGGAATGAAGATTCCTCAGTCTCAGGCGTCTCCTAGGGATATGGAGGCAACCTCTCAGGGAAAGAACAGAGGTTCAAAAGCAAAAAGGAAATCTTCTGTCGAAAAATCAAATAACTTAAATGATGAAGATGATGATGCATTACAACAGGCGATCAAACTTTCACTACAGGATTCTGGTGAAACCTCTGATGCACAGATGCAAGGTCCTTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAATGGGAGGAGGGATGAAGAGAAAAGGATTGTTCACTAGTCGGATGCAGATGAACGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGGAGTCCATTACATGACCGACGCAGATGACGACCAATGTGCGGAGGAGGATGGATATAGGAAGAATGGAAGAGGATGGCAATATCGATTGTCTCCCCCTCTGCTTTTTTCTAGAACAATCAAATGGAAGCATGCTCTTTATCCAATCATTCATCAGAAAATTATGAGCTGGTTTCTTCGAATCCTTCAAACAGAAGTGAGAAGACGAGCATCGAATTTACCTCGGCAGCATTCTTGCAAGATCAAGCTGCCTAAATCATCACATAAACTGAGGTCAGCCATAGCCATGAGCTCCTTCAGCTGGTTTCGAGTCATCACTACTTTGATCCTTAAAGGCCTCGAACAGCTTCTCAGTCCTTCGTGGCCTTCAATTGGTCGCTACCCATTTTCGCAGAAATCCATCACCAGCCCGTCTCCTTCTTCGACGTTAGCAGCTGGTCCTCCGACCAGTGATCCAGCCGCCGGCGACGAACTCGAGAAGTTTTCTTCTCTGGCGCGAGCACCTATCACGAGCCGCGACGCACAGGTCAGCAGTTGGTCCTTCGACGAACGCACGTCCACTGATTTCTCTTCCCAGGTTCGGACTGCTCGATTCAAGTTTAAGGTTGACATTGGGTGTCTTTCCCTTAAAACTAGGTGCTGGATCTTCCCATTTCTTAAGCGGGGATCTAGGTGGCTTGCTACATACAATCCCAAGGTTACCAAGGAAAAGAAATGTTAG

Coding sequence (CDS)

ATGACGCGTACCCAACACGACACTCCAATGTCTGATTCCGAGCGCAAGGAAGCTCCTAATTCTTCAAGCACTGACACAAAGAAGACGCCCAGAGGTTCCATCAGTGGCGGAGACGTCAAGGATACGCCGGAGTATGAGAAACAGAGGCTTTCTAGAATCGCCGAGAACAGGAAGAGAATGGAAGCCCTTGGATTGGCCAAATTGGCGACCTCATTTATGGATTCTTCCAAGACTCTGAGGAAGATTGATAGAAAGGGGAAGCGTAAGTTCGATGAAGATTATAATCCTGGCGAGGGTTCTTCGAATTCTGAAGATGATGACTCGGAGGAAGGGGATGAAGGTTTTGGAAGTGGGAAAGTTTCTAGGTCTCGTGGAATGAAGATTCCTCAGTCTCAGGCGTCTCCTAGGGATATGGAGGCAACCTCTCAGGGAAAGAACAGAGGTTCAAAAGCAAAAAGGAAATCTTCTGTCGAAAAATCAAATAACTTAAATGATGAAGATGATGATGCATTACAACAGGCGATCAAACTTTCACTACAGGATTCTGGTGAAACCTCTGATGCACAGATGCAAGGTCCTTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAATGGGAGGAGGGATGAAGAGAAAAGGATTGTTCACTAGTCGGATGCAGATGAACGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGGAGTCCATTACATGACCGACGCAGATGACGACCAATGTGCGGAGGAGGATGGATATAGGAAGAATGGAAGAGGATGGCAATATCGATTGTCTCCCCCTCTGCTTTTTTCTAGAACAATCAAATGGAAGCATGCTCTTTATCCAATCATTCATCAGAAAATTATGAGCTGGTTTCTTCGAATCCTTCAAACAGAAGTGAGAAGACGAGCATCGAATTTACCTCGGCAGCATTCTTGCAAGATCAAGCTGCCTAAATCATCACATAAACTGAGGTCAGCCATAGCCATGAGCTCCTTCAGCTGGTTTCGAGTCATCACTACTTTGATCCTTAAAGGCCTCGAACAGCTTCTCAGTCCTTCGTGGCCTTCAATTGGTCGCTACCCATTTTCGCAGAAATCCATCACCAGCCCGTCTCCTTCTTCGACGTTAGCAGCTGGTCCTCCGACCAGTGATCCAGCCGCCGGCGACGAACTCGAGAAGTTTTCTTCTCTGGCGCGAGCACCTATCACGAGCCGCGACGCACAGGTCAGCAGTTGGTCCTTCGACGAACGCACGTCCACTGATTTCTCTTCCCAGGTTCGGACTGCTCGATTCAAGTTTAAGGTTGACATTGGGTGTCTTTCCCTTAAAACTAGGTGCTGGATCTTCCCATTTCTTAAGCGGGGATCTAGGTGGCTTGCTACATACAATCCCAAGGTTACCAAGGAAAAGAAATGTTAG

Protein sequence

MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGSSNSEDDDSEEGDEGFGSGKVSRSRGMKIPQSQASPRDMEATSQGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDGVHYMTDADDDQCAEEDGYRKNGRGWQYRLSPPLLFSRTIKWKHALYPIIHQKIMSWFLRILQTEVRRRASNLPRQHSCKIKLPKSSHKLRSAIAMSSFSWFRVITTLILKGLEQLLSPSWPSIGRYPFSQKSITSPSPSSTLAAGPPTSDPAAGDELEKFSSLARAPITSRDAQVSSWSFDERTSTDFSSQVRTARFKFKVDIGCLSLKTRCWIFPFLKRGSRWLATYNPKVTKEKKC

Homology

[Close]

BLAST of CmoCh17G004720 vs. ExPASy TrEMBL
Match: A0A6J1H502 (caltractin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460448 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 2.0e-107
Identity = 220/236 (93.22%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGSSNSEDDDSEEGDEGFGSGKV 120
           EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGSSNSEDDDSEEGDEGFGSGKV
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGSSNSEDDDSEEGDEGFGSGKV 120

Query: 121 SRSRGMKIPQSQASPRDMEATSQGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQ 180
           SRSRGMK                GKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQ
Sbjct: 121 SRSRGMK----------------GKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQ 180

Query: 181 DSGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFD 237
           DSGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFD
Sbjct: 181 DSGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFD 220

[Close]

BLAST of CmoCh17G004720 vs. ExPASy TrEMBL
Match: A0A6J1H6F0 (uncharacterized protein LOC111460448 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460448 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 2.0e-107
Identity = 220/236 (93.22%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGSSNSEDDDSEEGDEGFGSGKV 120
           EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGSSNSEDDDSEEGDEGFGSGKV
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGSSNSEDDDSEEGDEGFGSGKV 120

Query: 121 SRSRGMKIPQSQASPRDMEATSQGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQ 180
           SRSRGMK                GKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQ
Sbjct: 121 SRSRGMK----------------GKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQ 180

Query: 181 DSGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFD 237
           DSGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFD
Sbjct: 181 DSGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFD 220

[Close]

BLAST of CmoCh17G004720 vs. ExPASy TrEMBL
Match: A0A6J1L0M5 (uncharacterized protein LOC111499295 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499295 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 9.8e-102
Identity = 211/236 (89.41%), Postives = 213/236 (90.25%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTR Q DTPMSDSERKEAPNSS  DTKKTPRGS+SGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRAQRDTPMSDSERKEAPNSSIIDTKKTPRGSMSGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGSSNSEDDDSEEGDEGFGSGKV 120
           EALGLAKLATSFMDSSKTLRKIDRKGK KFDEDYNPGE SSNSEDDDSEEGDEGFGSGKV
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKHKFDEDYNPGEDSSNSEDDDSEEGDEGFGSGKV 120

Query: 121 SRSRGMKIPQSQASPRDMEATSQGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQ 180
           SRSRGMK                GKNRGSK KRKSSVEKSNNLNDEDDDALQQAIKLSLQ
Sbjct: 121 SRSRGMK----------------GKNRGSKEKRKSSVEKSNNLNDEDDDALQQAIKLSLQ 180

Query: 181 DSGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFD 237
           +SGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFD
Sbjct: 181 ESGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFD 220

[Close]

BLAST of CmoCh17G004720 vs. ExPASy TrEMBL
Match: A0A6J1KWC6 (caltractin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499295 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 9.8e-102
Identity = 211/236 (89.41%), Postives = 213/236 (90.25%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTR Q DTPMSDSERKEAPNSS  DTKKTPRGS+SGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRAQRDTPMSDSERKEAPNSSIIDTKKTPRGSMSGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGSSNSEDDDSEEGDEGFGSGKV 120
           EALGLAKLATSFMDSSKTLRKIDRKGK KFDEDYNPGE SSNSEDDDSEEGDEGFGSGKV
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKHKFDEDYNPGEDSSNSEDDDSEEGDEGFGSGKV 120

Query: 121 SRSRGMKIPQSQASPRDMEATSQGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQ 180
           SRSRGMK                GKNRGSK KRKSSVEKSNNLNDEDDDALQQAIKLSLQ
Sbjct: 121 SRSRGMK----------------GKNRGSKEKRKSSVEKSNNLNDEDDDALQQAIKLSLQ 180

Query: 181 DSGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFD 237
           +SGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFD
Sbjct: 181 ESGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFD 220

[Close]

BLAST of CmoCh17G004720 vs. ExPASy TrEMBL
Match: A0A0A0KDV1 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108450 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 5.3e-71
Identity = 167/234 (71.37%), Postives = 187/234 (79.91%), Query Frame = 0


Query: 10  MSDSER-KEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKL 69
           ++DSE  +E PNSS+T +KK  RGS++G +VKD PEYEKQR+SRIAEN+KRMEALGLAK+
Sbjct: 6   LTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEALGLAKM 65

Query: 70  ATSFMDSSKTLRKIDRKGKRKF----DEDYNPGEGSSNSED-DDSEEGDEGFGSGKVSRS 129
           ATSF+DSSK LRK D KGKRK     D+DY PG  SS+SED DDSEEGDE FGSGKVS S
Sbjct: 66  ATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGNDSSSSEDEDDSEEGDEDFGSGKVSGS 125

Query: 130 RGMKIPQSQASPRDMEATSQGKNRGSKAKRKSSVEKSNNLN-DEDDDALQQAIKLSLQDS 189
           RG K                GKNRGS+ KRK SV+KSNN N ++DDDALQQAIKLSLQDS
Sbjct: 126 RGTK----------------GKNRGSETKRKVSVKKSNNFNHEDDDDALQQAIKLSLQDS 185

Query: 190 GETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFD 237
           GE SDAQ+QG FENVRRKN+KNQE  GGMKRKGLFTSRMQMNEDELIMNFYCFD
Sbjct: 186 GENSDAQVQGSFENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFD 223

[Close]

BLAST of CmoCh17G004720 vs. TAIR 10
Match: AT1G73440.1 (calmodulin-related )

HSP 1 Score: 72.8 bits (177), Expect = 8.4e-13
Identity = 83/244 (34.02%), Postives = 120/244 (49.18%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           M R + +   S SER+ + +SS  +++ T +G+IS        +YEKQRLSRIAEN+ R+
Sbjct: 1   MARGESEGESSGSERESSSSSSGNESEPT-KGTIS--------KYEKQRLSRIAENKARL 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKR---KFDEDYNP--GEGSSNSEDDDSEEGDEGF 120
           +ALG++K A + +  S   +K  R+ KR   + D+DY P   +G  + +DD+ EE DE  
Sbjct: 61  DALGISKAAKALLSPSPVSKK--RRVKRNSGEEDDDYTPVIADGDGDEDDDEVEEIDE-- 120

Query: 121 GSGKVSRSRGMKIPQSQASPRDMEATSQGKNRGSKAKRKSSVEKSNNLN---DEDDDALQ 180
                                D E   + KN+ S +KRK S  K  N +    EDDD L 
Sbjct: 121 ---------------------DEEFLCKRKNKSSASKRKVSSRKILNTSVSLGEDDDDLD 180

Query: 181 QAIKLSLQDSGETSDAQMQGPFENVRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNF 237
           +AI LSLQ S   SD                 +E     K++    S+ QM +DEL+M F
Sbjct: 181 KAIALSLQGSVAGSD-----------------KEAATMKKKRPELMSKTQMTQDELVMYF 193

[Close]

BLAST of CmoCh17G004720 vs. TAIR 10
Match: AT4G00140.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 43.9 bits (102), Expect = 4.2e-04
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 1  MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
          M R + +   S SER E+ +SSS +  +  +G IS        EYEKQRLSRIAEN+ R+
Sbjct: 1  MARGESEGESSGSER-ESSSSSSGNESEPIKGKIS--------EYEKQRLSRIAENKARL 60

Query: 61 EALGLAKLATSFMDS 76
          +ALG+  +A S   S
Sbjct: 61 DALGIPAIALSLQGS 66

The following BLAST results are available for this feature:

BLAST of CmoCh17G004720 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh17G004720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H502	2.0e-107	93.22	caltractin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460448 PE=4 SV...	[more]
A0A6J1H6F0	2.0e-107	93.22	uncharacterized protein LOC111460448 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1L0M5	9.8e-102	89.41	uncharacterized protein LOC111499295 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KWC6	9.8e-102	89.41	caltractin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499295 PE=4 SV=1	[more]
A0A0A0KDV1	5.3e-71	71.37	EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108450 PE=...	[more]

BLAST of CmoCh17G004720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73440.1	8.4e-13	34.02	calmodulin-related	[more]
AT4G00140.1	4.2e-04	44.00	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..383
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..167
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 166..185 score: 9.456464

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G004720.1	CmoCh17G004720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding