CmoCh17G003800 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh17G003800
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptioncraniofacial development protein 1 isoform X1
LocationCmo_Chr17: 2351653 .. 2355938 (+)
RNA-Seq ExpressionCmoCh17G003800
SyntenyCmoCh17G003800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCATTGAAAGCCCTAAACCTCGCGGAGAGAAATCTTTGGATGGCTACGAGCAACAACCTCCATGGCTCTGGTACTCCTCTTCCTTCCATGTTTCCTTTTCGTGGTTTCATGAAGTGTTATGTGGTGTGGATTTTTCAGAATTGAGTAATCCTTTATGAACAAGGAGGCACGTTTATTGATTTTCTCTTTTTTACTTCCTTTTAATTTCCTGTTTGCTGTCATATTACCAGAAATGTATGATCGTGAACCGAATTCACATCAGCAGGTTATTTAAGATGGACGACTTTTCTTGTTCTTAGTTGCGCTATAATTGTCTCTTTGAGATGAACCTTCTATTGTTTGTTGAAGTCTAAGAAGCGTATTGAGGATTTCTAGTATTGAGATAAAGTTATGAATTCTCTGTGTGCTCATAAACGAGGGGAGAAAAGTAGTTTAATTCTGTATGTTCGTCTTTTGGTACTGGTAAAAATTTTCGGAATTTCATTGAGTGGTTAAGTCTGCATAAGTTGGAGGCATCAAAGATTTGCGATACTTGGAGGTGGGTGCTCGAAATAACTTACCTTAACCCTCTTTTTGAAAACTTTTTTTGTTTGCTATAATTGTATTCAGGCCTTCCGGATTATATAAACTATAATGTATAGTTTTGGTTTTTTTCTTCTTTCCCTAACTAGCTGCTTAAATTTCGTAAGTACATCCTGTTTACTGTCTTTGTTTTTTTTTACAATACCTTCTTATAAAGAGTTCCTTCAATTTTCAATGTTACATTAGTTAATTTCCAGACCTTTAGGGATTTTGTTTTGACCTTCTTAATTATGTTTTCAATCTGTTCTGAGATGTGGAATTTATATTTTGAAGATAATTTCTCTTATGAGTAAGATTATTTGAGTGAACGAAAGTCATTGTTCTCCTTGAAATACTGGAAAGAAGAGTCTTGCTGTTGATTAGCGCTTTATCGTCTTTTGTTGTCTTCTGGTTATCTTTATTTGCTGGACCGTGTTAAGTGTTTAATTTCCATTAATACTTTATACTCCTTATCTCACTCGTTATCAAAGCATTAGTTGATCCTCTTTTATCAATTATCGATTCATGTATAGTAACACTAAATGCGAGGTTTGCAGCTTTTCCTATTTTTCCTCAGAAGGTTGACTTTTTTCATATTATATGTCAGATTCTGTGAATGAAATGCTAATGGAATCGGCTAAAGAAGGATCTGGTCATATGAGTTCAGAGGGAAAGCCCAATGACACAGGTGAGCATAGGAAGCGGACTATAAGTCGTTTATTGTTTTAATTCTTTTCGTTGCTATACATTTCTTTATTTGCATGTTAATTTATTGATTAAGAGGTATAATGATATTCTTCTTTATTATGCTAGAAATAAAAGCGCGTGTCGATGCCATGTGGGAGCAAATGAATAAAGGGGTGTCTAGTAAAACACTAAAAGGTTTGTCAACCAAACGAAGTCCAGTGGTGAATAAAAACTCAAAGAAACCATCCAATGTAAAAAATCACATTCTGCTCTTTCATGATGATGCAGCTCAAAATTTAGGAAAAATATCTCTTACTTTTTCTCTCTCCATCTTCCCCGTGTCTAGAATTGGATTGCATATCTAGGTATGGCGTCAAAGAAGATTGAACCTCAAGAAAAAGATACATTATCAGAAGGACCCAAGGTTCTGCAGGACAGTTCTATGGATGATGCTAAGATGCTTGCTGCTACTGCTCTCTCAGCTGTTAGGGATGCTACAGCTACCATTTCTGGCAGGGGGAAAGTTGAGGTGCCAATACTTTCATATATATTTTTATCTGTTTTTCTACCCTTTTAGGCGTGTGATTATCTAGGCATTTGGTTTTCTATTGTTACAAGACATATAGAGCTGAAGATGGATTTATCTATGTATGTCATTTGGTCAGTTGTTTGAATAATTGTTTAGATAATTTCTTCGTTGTTGGTAATGAAGGAGAACTTCCTTCTGTAATGATGCATGGGTAGGTAAGAAACACCCTTCTACTTCCATCTCTCTCTCTCTCTCTCTCTCGTCCTCCCTCTCCTTCTCCCTCTGTCCTTTTTTTGGTGATTTTTCTACCAAAAAATGTTTTGGTCTTTGATGCGTGGGAATAAGAAACTCATTCTTGGAGAATGGGTGTGAGAAGAAACTTACGGAAGGAGGAAAAGAGATTGCAGTTGTACTTGACTTGATTGATGAGATGAATCAAGGAAAGATAAAAAAGATTAAAAAGTGGATCTGTCTAGAACATTCTTGGTTAAATTTTTGGTGAAGCTACTTTACTGAAGGGTAGAAACTTGCTAGAAACTGAAAATCCTTAAGAAGTAATTGTTTTGTTGTGGATACTACAATTGGGTGGCATTAATACCACATATTAGTTGGTTAAAAGGTGTCCCCTGTTGCTTTTAGGAAAAAAAAAAGAAGAAAAAGGGTCCTGTTGCCTTAACCTTTCTACTGCATTTTTTGCATACAGGCAGGGAAGGATCAAACGTACTTGTCTGTCTTTCTACGCTCTTATGGCAGAAAACGTTGGGATAATTCTATGTATTTTGGTGTTTCATAGCGGTTGGAAAAGTTCCCTAACGAGGGTAACATATATGATATAACCTTAACCTCGTAGTATAAAGCTCAAAGCCAAAGCTAAATTGTTATGGAGTGCCATTAGATCAATCATTGGGAGGATTTGATTTGAAAGAAATCAAATTAGAGAAGTTTGTAGAATGGATGGAGAATGAATACTACAAAATATCAAGCCTCTTCTTGGTGTGGCCTGTCTATTGTACTTTGTAACCATACCTCCAATATAATTAAATTTTACTTCGGGGTTTTTCTTTATACAATGAGATTGGTCAGGCTTACATTTTCCTTAGTTCTGATAGTTGGGTGCTACTTTGTACTCTCCTAATAGGGAGTCTCAACTTCACAAGTATCACCAGAAAGTTGTTTACTGCTCAAAAAGTAAATATATTAATGACCCTGGTGTTAATTTTGAAAGCTTGGCTTGATTATATGACTACCTAGCCCGTCTATGGATAATCGTTACGTGTTTCTTCTGGAATTTAGGACTATAATTGTTGTGGTATCCCCTTTTCTTTGGTTAATTACTAGTTTTGGTGGGGAGGAGAATCAAAAGGTACGAGTCAAGATTTTACGACTTCATGGGTGAAGTTCGGTAAGTCGGGGCTTGGGTGGGATGTATGGGAGAGTCCTCCAAGAGGCTGATGGTCCTGATGTTTGATAACTGTACTTGCTTTATGATATCATCTCTTATAAAACCGTAAAACAGCTAGTTTTGCATTGTTTATGTTGATGATCTGTTAGTTGAAGAACTCAAACCATTGTCCTTTTACTTTAACAGATTACAGAGATTAGGGACTTCGCAGGCCAAAATGTTGAAATTAAGAAGTTTGTAGATGCTGATTCAAAGGAAGCATACGAGAAGATGAAGGCACCTGCTACTTCAGCTGTTGATGCAATCCTGGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTCAAGGAAGAAACCAAGGGGTTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAGTATCTCGATAAAGTTTCGTTCTTGCAGCGAGCCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGGTTGGCTCTGCAGGCCAGGAGGAGGCCTGATATGCGAGAGGAGCCATGATTAATAAACCATCAAGAGAAGCAAGCTCTGTGGAGAATGTGCCGTAAGTATTAAGGTTGTTCTTGAATTTCTTGTGCGTATCACTTCCAATAGGCAGTACAGTCGGCTCGGATGATTTGGAAGTGAGTAATGGTTCATTGTGTGCCCATAGCGTATTCTGATATCTGCCTGACAAAAACTGCAAATCATGCTTCGATGTAAATCTTGGTCTCCTACCATCAGAAAGATTTCTTGTAGCACTTATCTTTCTTCTGTTGTTGTGTACACGGTTGTTACTCAACGGATTAAGGCATCTTTACCAATATGAGCATAGCTTAGCCGGTATAAAGTATGTGTTATCAACAAAAAGATCAGAGGTTTGAATTTTTATCTCTCATATTATTGAGCTAAAGAAATGATATTTATTTACCATGCAAGGTAGAGATGTTTATTGAAGCTGTAGAATAGGGCTCGTAGAAACGGAGAATGATAATGAGGGAGGAAATGGAGAAAGATTTATCCTTGTTAGCTAGATAGGTCTTGTACTACCAGTTTGGAGGGAAGAGAATTAAAA

mRNA sequence

TTTCATTGAAAGCCCTAAACCTCGCGGAGAGAAATCTTTGGATGGCTACGAGCAACAACCTCCATGGCTCTGATTCTGTGAATGAAATGCTAATGGAATCGGCTAAAGAAGGATCTGGTCATATGAGTTCAGAGGGAAAGCCCAATGACACAGAAATAAAAGCGCGTGTCGATGCCATGTGGGAGCAAATGAATAAAGGGGTGTCTAGTAAAACACTAAAAGGTTTGTCAACCAAACGAAGTCCAGTGGTGAATAAAAACTCAAAGAAACCATCCAATAATTGGATTGCATATCTAGGTATGGCGTCAAAGAAGATTGAACCTCAAGAAAAAGATACATTATCAGAAGGACCCAAGGTTCTGCAGGACAGTTCTATGGATGATGCTAAGATGCTTGCTGCTACTGCTCTCTCAGCTGTTAGGGATGCTACAGCTACCATTTCTGGCAGGGGGAAAGTTGAGATTACAGAGATTAGGGACTTCGCAGGCCAAAATGTTGAAATTAAGAAGTTTGTAGATGCTGATTCAAAGGAAGCATACGAGAAGATGAAGGCACCTGCTACTTCAGCTGTTGATGCAATCCTGGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTCAAGGAAGAAACCAAGGGGTTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAGTATCTCGATAAAGTTTCGTTCTTGCAGCGAGCCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGGTTGGCTCTGCAGGCCAGGAGGAGGCCTGATATGCGAGAGGAGCCATGATTAATAAACCATCAAGAGAAGCAAGCTCTGTGGAGAATGTGCCGTAAGTATTAAGGTTGTTCTTGAATTTCTTGTGCGTATCACTTCCAATAGGCAGTACAGTCGGCTCGGATGATTTGGAAGTGAGTAATGGTTCATTGTGTGCCCATAGCGTATTCTGATATCTGCCTGACAAAAACTGCAAATCATGCTTCGATGTAAATCTTGGTCTCCTACCATCAGAAAGATTTCTTGTAGCACTTATCTTTCTTCTGTTGTTGTGTACACGGTTGTTACTCAACGGATTAAGGCATCTTTACCAATATGAGCATAGCTTAGCCGGTATAAAGTATGTGTTATCAACAAAAAGATCAGAGGTTTGAATTTTTATCTCTCATATTATTGAGCTAAAGAAATGATATTTATTTACCATGCAAGGTAGAGATGTTTATTGAAGCTGTAGAATAGGGCTCGTAGAAACGGAGAATGATAATGAGGGAGGAAATGGAGAAAGATTTATCCTTGTTAGCTAGATAGGTCTTGTACTACCAGTTTGGAGGGAAGAGAATTAAAA

Coding sequence (CDS)

ATGGCTACGAGCAACAACCTCCATGGCTCTGATTCTGTGAATGAAATGCTAATGGAATCGGCTAAAGAAGGATCTGGTCATATGAGTTCAGAGGGAAAGCCCAATGACACAGAAATAAAAGCGCGTGTCGATGCCATGTGGGAGCAAATGAATAAAGGGGTGTCTAGTAAAACACTAAAAGGTTTGTCAACCAAACGAAGTCCAGTGGTGAATAAAAACTCAAAGAAACCATCCAATAATTGGATTGCATATCTAGGTATGGCGTCAAAGAAGATTGAACCTCAAGAAAAAGATACATTATCAGAAGGACCCAAGGTTCTGCAGGACAGTTCTATGGATGATGCTAAGATGCTTGCTGCTACTGCTCTCTCAGCTGTTAGGGATGCTACAGCTACCATTTCTGGCAGGGGGAAAGTTGAGATTACAGAGATTAGGGACTTCGCAGGCCAAAATGTTGAAATTAAGAAGTTTGTAGATGCTGATTCAAAGGAAGCATACGAGAAGATGAAGGCACCTGCTACTTCAGCTGTTGATGCAATCCTGGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTCAAGGAAGAAACCAAGGGGTTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAGTATCTCGATAAAGTTTCGTTCTTGCAGCGAGCCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGGTTGGCTCTGCAGGCCAGGAGGAGGCCTGATATGCGAGAGGAGCCATGA

Protein sequence

MATSNNLHGSDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAILEQIKKKQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRPDMREEP
Homology
BLAST of CmoCh17G003800 vs. ExPASy Swiss-Prot
Match: Q75QI0 (Craniofacial development protein 1 OS=Gallus gallus OX=9031 GN=CFDP1 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.3e-14
Identity = 52/131 (39.69%), Postives = 81/131 (61.83%), Query Frame = 0

Query: 137 GKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMK--------APAT----------SAVD 196
           G+V IT++ DFAG+ V + K VD+ SKEA   +K        AP +          S + 
Sbjct: 157 GRVTITKVFDFAGEEVRVTKEVDSSSKEAKSFLKQQEKWQSSAPGSLPTVSGVKRPSGIS 216

Query: 197 AILEQI-KKKQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYR 249
           ++L +I  KKQK+S L+K+K DW  FKEE +G+ E+L  + +  + Y+++ +FL+R D+R
Sbjct: 217 SLLGKIGSKKQKMSTLEKSKLDWENFKEE-EGIVEELAIHNRGKDGYIERKAFLERVDHR 276

BLAST of CmoCh17G003800 vs. ExPASy Swiss-Prot
Match: O88271 (Craniofacial development protein 1 OS=Mus musculus OX=10090 GN=Cfdp1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.5e-13
Identity = 66/204 (32.35%), Postives = 104/204 (50.98%), Query Frame = 0

Query: 71  NKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSS--MDDAKMLAATALSAVRD 130
           N   KK    W ++L      + P+ K       KV +++     +  ++ A  L   R+
Sbjct: 100 NARKKKEDELWASFL----NDVGPKSKAAPGSQTKVAEETEEISSNKPLVKADELDKPRE 159

Query: 131 ATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMK------------APAT-- 190
           +        KV+IT++ DFAG+ V + K VDA SKEA   +K            +PAT  
Sbjct: 160 SE-------KVKITKVFDFAGEEVRVTKEVDAASKEAKSFLKQTEREKPQALVTSPATPL 219

Query: 191 ---------SAVDAILEQI-KKKQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQY 249
                    S + ++L +I  KKQK+S L+K+K DW  FKEE +G+ E+L  + +    Y
Sbjct: 220 PAGSGIKRASGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEE-EGIGEELAIHNRGKEGY 279

BLAST of CmoCh17G003800 vs. ExPASy Swiss-Prot
Match: Q75UQ2 (Craniofacial development protein 1 OS=Rattus norvegicus OX=10116 GN=Cfdp1 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.0e-12
Identity = 64/198 (32.32%), Postives = 100/198 (50.51%), Query Frame = 0

Query: 75  KKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRDATATIS 134
           KK    W ++L     K +      +    +  + SS     ++ A  L   +++     
Sbjct: 104 KKEDELWASFLNDVGTKSKAASSSQVKVAEETEETSS--SKPLVKADELEKPKESE---- 163

Query: 135 GRGKVEITEIRDFAGQNVEIKKFVDADSKEA------YEKMKAPA--------------- 194
              KV+IT++ DFAG+ V + K VDA SKEA       EK K  A               
Sbjct: 164 ---KVKITKVFDFAGEEVRVTKEVDATSKEAKSFLKQTEKEKPQALVTSAATPPPAGSGI 223

Query: 195 --TSAVDAILEQI-KKKQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSF 249
             TS + ++L +I  KKQK+S L+K+K DW  FKEE +G+ E+L  + +    Y+++ +F
Sbjct: 224 KRTSGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEE-EGIGEELAIHNRGKEGYIERKAF 283

BLAST of CmoCh17G003800 vs. ExPASy Swiss-Prot
Match: Q9UEE9 (Craniofacial development protein 1 OS=Homo sapiens OX=9606 GN=CFDP1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-12
Identity = 74/255 (29.02%), Postives = 119/255 (46.67%), Query Frame = 0

Query: 18  MESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKP 77
           +E  +E   +  SEG  ++ E  A       +  KG+ S+             +   KK 
Sbjct: 70  LEEEEEEDANSESEGSSSEEEDDA------AEQEKGIGSE-------------DARKKKE 129

Query: 78  SNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRDATATISGRG 137
              W ++L     K +      + +G +  + SS     ++ A  L   ++         
Sbjct: 130 DELWASFLNDVGPKSKVPPSTQVKKGEETEETSS--SKLLVKAEELEKPKETE------- 189

Query: 138 KVEITEIRDFAGQNVEIKKFVDADSKEA------YEKMKAPA-----------------T 197
           KV+IT++ DFAG+ V + K VDA SKEA       EK K  A                 +
Sbjct: 190 KVKITKVFDFAGEEVRVTKEVDATSKEAKSFFKQNEKEKPQANVPSALPSLPAGSGLKRS 249

Query: 198 SAVDAILEQI-KKKQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQR 249
           S + ++L +I  KKQK+S L+K+K DW  FKEE +G+ E+L  + +    Y+++ +FL R
Sbjct: 250 SGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEE-EGIGEELAIHNRGKEGYIERKAFLDR 295

BLAST of CmoCh17G003800 vs. ExPASy Swiss-Prot
Match: Q8HXY9 (Craniofacial development protein 1 OS=Bos taurus OX=9913 GN=CFDP1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.5e-12
Identity = 81/254 (31.89%), Postives = 120/254 (47.24%), Query Frame = 0

Query: 19  ESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKPS 78
           E A E SG  SSE +          DA  EQ  KGV S+             +   KK  
Sbjct: 75  EDANEESGGSSSEEE----------DAATEQ-QKGVESE-------------DARKKKED 134

Query: 79  NNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRDATATISGRGK 138
             W ++L     K +      +  G +  + SS   + ++ A  L   ++         K
Sbjct: 135 ELWASFLNDVGPKSKVPPSTHVKTGEETEETSS---SHLVKAERLEKPKETE-------K 194

Query: 139 VEITEIRDFAGQNVEIKKFVDADSKEA------YEKMK-----------APA------TS 198
           V+IT++ DFAG+ V + K VDA SKEA       EK K            PA      +S
Sbjct: 195 VKITKVFDFAGEEVRVIKEVDATSKEAKSFFKQNEKEKPQSNVPPAVPSLPAGSGLKRSS 254

Query: 199 AVDAILEQI-KKKQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRA 249
            + ++L +I  KKQK+S L+K+K DW  FKEE +G+ E+L  + +    Y+++ +FL R 
Sbjct: 255 GMSSLLGKIGAKKQKMSTLEKSKLDWESFKEE-EGIGEELAIHNRGKEGYIERKAFLDRV 293

BLAST of CmoCh17G003800 vs. ExPASy TrEMBL
Match: A0A6J1H4U3 (craniofacial development protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460409 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 4.1e-134
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0

Query: 1   MATSNNLHGSDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLK 60
           MATSNNLHGSDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLK
Sbjct: 1   MATSNNLHGSDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLK 60

Query: 61  GLSTKRSPVVNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAA 120
           GLSTKRSPVVNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAA
Sbjct: 61  GLSTKRSPVVNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAA 120

Query: 121 TALSAVRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAI 180
           TALSAVRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAI
Sbjct: 121 TALSAVRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAI 180

Query: 181 LEQIKKKQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFE 240
           LEQIKKKQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFE
Sbjct: 181 LEQIKKKQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFE 240

Query: 241 RERDARLALQARRRPDMREEP 262
           RERDARLALQARRRPDMREEP
Sbjct: 241 RERDARLALQARRRPDMREEP 261

BLAST of CmoCh17G003800 vs. ExPASy TrEMBL
Match: A0A6J1KYB0 (craniofacial development protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499305 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.0e-132
Identity = 258/261 (98.85%), Postives = 261/261 (100.00%), Query Frame = 0

Query: 1   MATSNNLHGSDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLK 60
           MATSNNLHGSDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARV+AMWEQMNKGVSSKTLK
Sbjct: 1   MATSNNLHGSDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVNAMWEQMNKGVSSKTLK 60

Query: 61  GLSTKRSPVVNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAA 120
           GLSTKRSPVVNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAA
Sbjct: 61  GLSTKRSPVVNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAA 120

Query: 121 TALSAVRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAI 180
           TALSAVRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAI
Sbjct: 121 TALSAVRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAI 180

Query: 181 LEQIKKKQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFE 240
           LEQIKKKQKLSVLDKTKKDWGEFKEETKGLEEDL++YKKSSNQYLDKVSFLQRADYREFE
Sbjct: 181 LEQIKKKQKLSVLDKTKKDWGEFKEETKGLEEDLESYKKSSNQYLDKVSFLQRADYREFE 240

Query: 241 RERDARLALQARRRPDMREEP 262
           RERDARLALQARRRPDMREEP
Sbjct: 241 RERDARLALQARRRPDMREEP 261

BLAST of CmoCh17G003800 vs. ExPASy TrEMBL
Match: A0A6J1L2Q7 (craniofacial development protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499305 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.4e-128
Identity = 250/256 (97.66%), Postives = 254/256 (99.22%), Query Frame = 0

Query: 6   NLHGSDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTK 65
           N H +DSVNEMLMESAKEGSGHMSSEGKPNDTEIKARV+AMWEQMNKGVSSKTLKGLSTK
Sbjct: 7   NSHPADSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVNAMWEQMNKGVSSKTLKGLSTK 66

Query: 66  RSPVVNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSA 125
           RSPVVNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSA
Sbjct: 67  RSPVVNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSA 126

Query: 126 VRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAILEQIK 185
           VRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAILEQIK
Sbjct: 127 VRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAILEQIK 186

Query: 186 KKQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDA 245
           KKQKLSVLDKTKKDWGEFKEETKGLEEDL++YKKSSNQYLDKVSFLQRADYREFERERDA
Sbjct: 187 KKQKLSVLDKTKKDWGEFKEETKGLEEDLESYKKSSNQYLDKVSFLQRADYREFERERDA 246

Query: 246 RLALQARRRPDMREEP 262
           RLALQARRRPDMREEP
Sbjct: 247 RLALQARRRPDMREEP 262

BLAST of CmoCh17G003800 vs. ExPASy TrEMBL
Match: A0A6J1H5W9 (craniofacial development protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460409 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 7.0e-126
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0

Query: 16  MLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSK 75
           MLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSK
Sbjct: 1   MLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSK 60

Query: 76  KPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRDATATISG 135
           KPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRDATATISG
Sbjct: 61  KPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRDATATISG 120

Query: 136 RGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAILEQIKKKQKLSVLDK 195
           RGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAILEQIKKKQKLSVLDK
Sbjct: 121 RGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAILEQIKKKQKLSVLDK 180

Query: 196 TKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 255
           TKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP
Sbjct: 181 TKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 240

Query: 256 DMREEP 262
           DMREEP
Sbjct: 241 DMREEP 246

BLAST of CmoCh17G003800 vs. ExPASy TrEMBL
Match: A0A6J1KWE6 (craniofacial development protein 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111499305 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.7e-124
Identity = 243/246 (98.78%), Postives = 246/246 (100.00%), Query Frame = 0

Query: 16  MLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSK 75
           MLMESAKEGSGHMSSEGKPNDTEIKARV+AMWEQMNKGVSSKTLKGLSTKRSPVVNKNSK
Sbjct: 1   MLMESAKEGSGHMSSEGKPNDTEIKARVNAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSK 60

Query: 76  KPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRDATATISG 135
           KPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRDATATISG
Sbjct: 61  KPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRDATATISG 120

Query: 136 RGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAILEQIKKKQKLSVLDK 195
           RGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAILEQIKKKQKLSVLDK
Sbjct: 121 RGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAILEQIKKKQKLSVLDK 180

Query: 196 TKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 255
           TKKDWGEFKEETKGLEEDL++YKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP
Sbjct: 181 TKKDWGEFKEETKGLEEDLESYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 240

Query: 256 DMREEP 262
           DMREEP
Sbjct: 241 DMREEP 246

BLAST of CmoCh17G003800 vs. TAIR 10
Match: AT5G30490.1 (CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). )

HSP 1 Score: 214.9 bits (546), Expect = 7.6e-56
Identity = 135/244 (55.33%), Postives = 177/244 (72.54%), Query Frame = 0

Query: 24  GSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKPSNNWIA 83
           GS   S E   + T +  +V  +W++MN+GV +K +  +ST    +  KNS   ++NW +
Sbjct: 2   GSHEQSPENNGSST-VSKKVADIWQRMNEGVPNKRVNFVST---ALPAKNS--ANSNWKS 61

Query: 84  YLGMASKKIEPQEKDT-LSEGPK-VLQDSSMDDAKMLAATALSAVRDATAT---ISGRGK 143
           YLG+  KK     KDT +S+  K VL  S  ++AK +AA AL+AVR+AT T    S RGK
Sbjct: 62  YLGVNVKK-----KDTCVSDVQKSVLNHSCSEEAKSIAAAALAAVRNATVTAAAASSRGK 121

Query: 144 VEITEIRDFAGQNVEIKKFVDADSKEAYEK------MKAPATSAVDAILEQIKKKQKLSV 203
           +EITE++DFAGQ +E+K+ V+ADSKEA E+        + A SAVDA+LEQIKKKQKLSV
Sbjct: 122 IEITEVKDFAGQEIEVKRLVEADSKEALERGNKGSSSSSAAPSAVDAVLEQIKKKQKLSV 181

Query: 204 LDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQAR 257
           LDKTKKDWGE+KEE KG+E++LD YKKSS+QYLDKV FL+RADYR+FE+ERDARLALQ++
Sbjct: 182 LDKTKKDWGEYKEEHKGVEDELDKYKKSSDQYLDKVGFLERADYRQFEKERDARLALQSK 234

BLAST of CmoCh17G003800 vs. TAIR 10
Match: AT5G30490.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). )

HSP 1 Score: 214.9 bits (546), Expect = 7.6e-56
Identity = 135/244 (55.33%), Postives = 177/244 (72.54%), Query Frame = 0

Query: 24  GSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKPSNNWIA 83
           GS   S E   + T +  +V  +W++MN+GV +K +  +ST    +  KNS   ++NW +
Sbjct: 2   GSHEQSPENNGSST-VSKKVADIWQRMNEGVPNKRVNFVST---ALPAKNS--ANSNWKS 61

Query: 84  YLGMASKKIEPQEKDT-LSEGPK-VLQDSSMDDAKMLAATALSAVRDATAT---ISGRGK 143
           YLG+  KK     KDT +S+  K VL  S  ++AK +AA AL+AVR+AT T    S RGK
Sbjct: 62  YLGVNVKK-----KDTCVSDVQKSVLNHSCSEEAKSIAAAALAAVRNATVTAAAASSRGK 121

Query: 144 VEITEIRDFAGQNVEIKKFVDADSKEAYEK------MKAPATSAVDAILEQIKKKQKLSV 203
           +EITE++DFAGQ +E+K+ V+ADSKEA E+        + A SAVDA+LEQIKKKQKLSV
Sbjct: 122 IEITEVKDFAGQEIEVKRLVEADSKEALERGNKGSSSSSAAPSAVDAVLEQIKKKQKLSV 181

Query: 204 LDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQAR 257
           LDKTKKDWGE+KEE KG+E++LD YKKSS+QYLDKV FL+RADYR+FE+ERDARLALQ++
Sbjct: 182 LDKTKKDWGEYKEEHKGVEDELDKYKKSSDQYLDKVGFLERADYRQFEKERDARLALQSK 234

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q75QI05.3e-1439.69Craniofacial development protein 1 OS=Gallus gallus OX=9031 GN=CFDP1 PE=2 SV=1[more]
O882714.5e-1332.35Craniofacial development protein 1 OS=Mus musculus OX=10090 GN=Cfdp1 PE=1 SV=1[more]
Q75UQ21.0e-1232.32Craniofacial development protein 1 OS=Rattus norvegicus OX=10116 GN=Cfdp1 PE=1 S... [more]
Q9UEE92.9e-1229.02Craniofacial development protein 1 OS=Homo sapiens OX=9606 GN=CFDP1 PE=1 SV=1[more]
Q8HXY98.5e-1231.89Craniofacial development protein 1 OS=Bos taurus OX=9913 GN=CFDP1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1H4U34.1e-134100.00craniofacial development protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1KYB01.0e-13298.85craniofacial development protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1L2Q73.4e-12897.66craniofacial development protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1H5W97.0e-126100.00craniofacial development protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1KWE61.7e-12498.78craniofacial development protein 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
Match NameE-valueIdentityDescription
AT5G30490.17.6e-5655.33CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterP... [more]
AT5G30490.27.6e-5655.33FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011421BCNT-C domainPFAMPF07572BCNTcoord: 175..248
e-value: 4.4E-24
score: 84.4
IPR011421BCNT-C domainPROSITEPS51279BCNT_Ccoord: 171..252
score: 19.728992
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..75
NoneNo IPR availablePANTHERPTHR23227:SF45SWR1-COMPLEX PROTEIN 5coord: 28..260
IPR027124SWR1-complex protein 5/Craniofacial development protein 1/2PANTHERPTHR23227BUCENTAUR RELATEDcoord: 28..260

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G003800.1CmoCh17G003800.1mRNA