CmoCh17G003650 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G003650
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor bHLH147-like
Location	Cmo_Chr17: 2240071 .. 2240679 (+)
RNA-Seq Expression	CmoCh17G003650
Synteny	CmoCh17G003650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCATCTGTTCATTCGAACTCCGATCGCGCGCGGGAGTCTTCAAGGAGGCAGAAGAAGAAGAAAAGCCACGGCAACAGAGATCATCATCAAAACCAGAACCATATTAAATGGAAGTCTCAAGCGCAGCAAGAAATTTACTCGTCCAAGCTGGTCCGAGCATTGAATCAAGTGAGGCTCAGTCCTCCGAACGAGGCGCCGCGCCGCGGCAGAGCCGTACGCGAGGCCGCTGACAGAGTCCTCGCCGTCGCTGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATCTTAACGAACAGGCTGAAACTCAAATTCAGGAAGCCGAAAAGACAGAGATCGGCATCCACCGCCGGAAACAACCGCTCAAAGAAACCTAGAGTTAGCGTGTTGCGGTTGAGAGGGAAATCCTTACCGGCGGTACAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCGTTGCCGGTTATCCTGGAAGAGGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGCCGCAGGCTCTAGCTCCGCCCCACCAAACTGA

mRNA sequence

ATGGCGTCATCTGTTCATTCGAACTCCGATCGCGCGCGGGAGTCTTCAAGGAGGCAGAAGAAGAAGAAAAGCCACGGCAACAGAGATCATCATCAAAACCAGAACCATATTAAATGGAAGTCTCAAGCGCAGCAAGAAATTTACTCGTCCAAGCTGGTCCGAGCATTGAATCAAGTGAGGCTCAGTCCTCCGAACGAGGCGCCGCGCCGCGGCAGAGCCGTACGCGAGGCCGCTGACAGAGTCCTCGCCGTCGCTGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATCTTAACGAACAGGCTGAAACTCAAATTCAGGAAGCCGAAAAGACAGAGATCGGCATCCACCGCCGGAAACAACCGCTCAAAGAAACCTAGAGTTAGCGTGTTGCGGTTGAGAGGGAAATCCTTACCGGCGGTACAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCGTTGCCGGTTATCCTGGAAGAGGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGCCGCAGGCTCTAGCTCCGCCCCACCAAACTGA

Coding sequence (CDS)

ATGGCGTCATCTGTTCATTCGAACTCCGATCGCGCGCGGGAGTCTTCAAGGAGGCAGAAGAAGAAGAAAAGCCACGGCAACAGAGATCATCATCAAAACCAGAACCATATTAAATGGAAGTCTCAAGCGCAGCAAGAAATTTACTCGTCCAAGCTGGTCCGAGCATTGAATCAAGTGAGGCTCAGTCCTCCGAACGAGGCGCCGCGCCGCGGCAGAGCCGTACGCGAGGCCGCTGACAGAGTCCTCGCCGTCGCTGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATCTTAACGAACAGGCTGAAACTCAAATTCAGGAAGCCGAAAAGACAGAGATCGGCATCCACCGCCGGAAACAACCGCTCAAAGAAACCTAGAGTTAGCGTGTTGCGGTTGAGAGGGAAATCCTTACCGGCGGTACAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCGTTGCCGGTTATCCTGGAAGAGGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGCCGCAGGCTCTAGCTCCGCCCCACCAAACTGA

Protein sequence

MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRLSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSAAGSSSAPPN

Homology

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BLAST of CmoCh17G003650 vs. ExPASy Swiss-Prot
Match: Q9LSN7 (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-41
Identity = 116/214 (54.21%), Postives = 145/214 (67.76%), Query Frame = 0


Query: 3   SSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHI---KWKSQAQQEIYSSKLVRALNQV 62
           ++  SNSDR    SRR++KKKS  +         I   KW+S+ QQ+IYS+KLV AL ++
Sbjct: 15  TTTSSNSDR----SRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALREL 74

Query: 63  RL------SPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRS 122
           R+      S  +  PR GRAVRE ADR LAVAA+G+T WSRAIL+  +KLKFRK KRQR 
Sbjct: 75  RISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRI 134

Query: 123 AS------TAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEAT 182
           ++      T G+ RSKK R +VLRL+ K LPAVQRKV+VL RLVPGCRK+ LPV+LEE T
Sbjct: 135 SNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETT 194

Query: 183 DYIAALEMQVRAMSALAELLSASTSAAGSSSAPP 202
           DYIAA+EMQ+R M+A+        SA  SS  PP
Sbjct: 195 DYIAAMEMQIRTMTAI-------LSAVSSSPPPP 217

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BLAST of CmoCh17G003650 vs. ExPASy Swiss-Prot
Match: Q9C8Z9 (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.8e-41
Identity = 111/206 (53.88%), Postives = 140/206 (67.96%), Query Frame = 0


Query: 3   SSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRL- 62
           +S  S+  R ++ S       S  +      + H +W+S+ QQ IYS+KL +AL QVRL 
Sbjct: 12  TSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKLFQALQQVRLN 71

Query: 63  -----SPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSAS- 122
                S    A +RG+AVREAADR LAV+A+GRT WSRAIL NR+KLKFRK +R R+   
Sbjct: 72  SSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMA 131

Query: 123 --------TAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEAT 182
                   ++ +NRS+K RVSVLRL  KS+P V RKVRVLGRLVPGC K+ +PVILEEAT
Sbjct: 132 IPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEAT 191

Query: 183 DYIAALEMQVRAMSALAELLSASTSA 194
           DYI ALEMQVRAM++L +LLS+  SA
Sbjct: 192 DYIQALEMQVRAMNSLVQLLSSYGSA 217

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BLAST of CmoCh17G003650 vs. ExPASy Swiss-Prot
Match: O80482 (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.3e-28
Identity = 92/203 (45.32%), Postives = 132/203 (65.02%), Query Frame = 0


Query: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQ----NQNHIK-WKSQAQQEIYSSKLVRA 60
           M  S+  + +   ESSRR+K + S       +    N+  +K WK+   Q+IY+ KLV A
Sbjct: 1   MVESLFPSIENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEA 60

Query: 61  LNQVR----LSPPNEAPR----RGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK 120
           L +VR     +  NE  +      R +R+ ADRVLA +A+G TRWSRAIL +R++ K +K
Sbjct: 61  LRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKK 120

Query: 121 PKRQRSASTAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEAT 180
            ++ + ++  GN +S+K      R++   LPAV+RK+++LGRLVPGCRK  +P +L+EAT
Sbjct: 121 HRKAKKST--GNCKSRKGLTETNRIK---LPAVERKLKILGRLVPGCRKVSVPNLLDEAT 180

Query: 181 DYIAALEMQVRAMSALAELLSAS 191
           DYIAALEMQVRAM ALAELL+A+
Sbjct: 181 DYIAALEMQVRAMEALAELLTAA 198

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BLAST of CmoCh17G003650 vs. ExPASy Swiss-Prot
Match: Q9M9L6 (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-20
Identity = 71/162 (43.83%), Postives = 95/162 (58.64%), Query Frame = 0


Query: 38  KWKSQAQQEIYSSKLVRALNQVRLSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAIL 97
           +W++   Q++YS KL  AL         +  RR   VR+ AD+VLA  A+G TRWSRAIL
Sbjct: 62  RWRATTAQKVYSLKLYDAL---------QRSRRSATVRDTADKVLATTARGATRWSRAIL 121

Query: 98  TNRLKLKFRKPKRQRSASTAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKE 157
            +R     R+ +  + AS      +   R S    R + L AV  +VRVLG LVPGCR+ 
Sbjct: 122 VSRFGTSLRRRRNTKPASAL----AAAIRGSGGSGRRRKLSAVGNRVRVLGGLVPGCRRT 181

Query: 158 PLPVILEEATDYIAALEMQVRAMSALAELLSASTSAAGSSSA 200
            LP +L+E  DYIAALEMQVRAM+AL+++LS    +    SA
Sbjct: 182 ALPELLDETADYIAALEMQVRAMTALSKILSELQPSTNLGSA 210

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BLAST of CmoCh17G003650 vs. ExPASy TrEMBL
Match: A0A6J1H465 (transcription factor bHLH147-like OS=Cucurbita moschata OX=3662 GN=LOC111460328 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60
           MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 61  LSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNN 120
           LSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNN
Sbjct: 61  LSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNN 120

Query: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180
           RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM
Sbjct: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180

Query: 181 SALAELLSASTSAAGSSSAPPN 203
           SALAELLSASTSAAGSSSAPPN
Sbjct: 181 SALAELLSASTSAAGSSSAPPN 202

[Close]

BLAST of CmoCh17G003650 vs. ExPASy TrEMBL
Match: A0A6J1L1P5 (transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111499053 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.2e-95
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60
           MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 61  LSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNN 120
           LSPPNE PRRGRAVREAADRVLAVAAKGRTRWSRAIL NRLKLKFRKPKRQRSASTAGNN
Sbjct: 61  LSPPNEGPRRGRAVREAADRVLAVAAKGRTRWSRAILKNRLKLKFRKPKRQRSASTAGNN 120

Query: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180
           RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM
Sbjct: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180

Query: 181 SALAELLSASTSAAGSSSAPPN 203
           SALAELLSASTSAAGSSSAPPN
Sbjct: 181 SALAELLSASTSAAGSSSAPPN 202

[Close]

BLAST of CmoCh17G003650 vs. ExPASy TrEMBL
Match: A0A0A0KCL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86
Identity = 195/206 (94.66%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MASSVHSNSDRARE-SSRRQKKKKSHGNRDHHQNQN-HIKWKSQAQQEIYSSKLVRALNQ 60
           MASSV SNSDRARE SSR+QKKKKSHGNRDHHQNQN HIKWKSQAQQEIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARESSSRKQKKKKSHGNRDHHQNQNHHIKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPPNEA-PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK-PKRQRSAST 120
           VRL P NEA PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK PKRQRS ST
Sbjct: 61  VRLGPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPKRQRSTST 120

Query: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180
           AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMSALAELLSASTSAAGSSSAPPN 203
           VRAMSALAELLSASTSAAGSSS+PP+
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]

BLAST of CmoCh17G003650 vs. ExPASy TrEMBL
Match: A0A1S3C760 (transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103497780 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.2e-85
Identity = 193/206 (93.69%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MASSVHSNSDRARE-SSRRQKKKKSHGNRDHHQNQN-HIKWKSQAQQEIYSSKLVRALNQ 60
           MASSV SNSDRARE SSR+QKKKKSHGNRDHHQ+QN HIKWKSQAQQEIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARESSSRKQKKKKSHGNRDHHQSQNHHIKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPPNEA-PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK-PKRQRSAST 120
           VRLSP NEA PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK P+RQRS S+
Sbjct: 61  VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPRRQRSTSS 120

Query: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180
           AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMSALAELLSASTSAAGSSSAPPN 203
           VRAMSALAELLSASTSAAGSSS+PP+
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]

BLAST of CmoCh17G003650 vs. ExPASy TrEMBL
Match: A0A5D3BVW3 (Transcription factor bHLH147-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00450 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.2e-85
Identity = 193/206 (93.69%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MASSVHSNSDRARE-SSRRQKKKKSHGNRDHHQNQN-HIKWKSQAQQEIYSSKLVRALNQ 60
           MASSV SNSDRARE SSR+QKKKKSHGNRDHHQ+QN HIKWKSQAQQEIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARESSSRKQKKKKSHGNRDHHQSQNHHIKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPPNEA-PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK-PKRQRSAST 120
           VRLSP NEA PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK P+RQRS S+
Sbjct: 61  VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPRRQRSTSS 120

Query: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180
           AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMSALAELLSASTSAAGSSSAPPN 203
           VRAMSALAELLSASTSAAGSSS+PP+
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]

BLAST of CmoCh17G003650 vs. TAIR 10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 171.0 bits (432), Expect = 9.7e-43
Identity = 116/214 (54.21%), Postives = 145/214 (67.76%), Query Frame = 0


Query: 3   SSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHI---KWKSQAQQEIYSSKLVRALNQV 62
           ++  SNSDR    SRR++KKKS  +         I   KW+S+ QQ+IYS+KLV AL ++
Sbjct: 15  TTTSSNSDR----SRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALREL 74

Query: 63  RL------SPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRS 122
           R+      S  +  PR GRAVRE ADR LAVAA+G+T WSRAIL+  +KLKFRK KRQR 
Sbjct: 75  RISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRI 134

Query: 123 AS------TAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEAT 182
           ++      T G+ RSKK R +VLRL+ K LPAVQRKV+VL RLVPGCRK+ LPV+LEE T
Sbjct: 135 SNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETT 194

Query: 183 DYIAALEMQVRAMSALAELLSASTSAAGSSSAPP 202
           DYIAA+EMQ+R M+A+        SA  SS  PP
Sbjct: 195 DYIAAMEMQIRTMTAI-------LSAVSSSPPPP 217

[Close]

BLAST of CmoCh17G003650 vs. TAIR 10
Match: AT3G17100.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 171.0 bits (432), Expect = 9.7e-43
Identity = 116/214 (54.21%), Postives = 145/214 (67.76%), Query Frame = 0


Query: 3   SSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHI---KWKSQAQQEIYSSKLVRALNQV 62
           ++  SNSDR    SRR++KKKS  +         I   KW+S+ QQ+IYS+KLV AL ++
Sbjct: 15  TTTSSNSDR----SRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALREL 74

Query: 63  RL------SPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRS 122
           R+      S  +  PR GRAVRE ADR LAVAA+G+T WSRAIL+  +KLKFRK KRQR 
Sbjct: 75  RISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRI 134

Query: 123 AS------TAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEAT 182
           ++      T G+ RSKK R +VLRL+ K LPAVQRKV+VL RLVPGCRK+ LPV+LEE T
Sbjct: 135 SNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETT 194

Query: 183 DYIAALEMQVRAMSALAELLSASTSAAGSSSAPP 202
           DYIAA+EMQ+R M+A+        SA  SS  PP
Sbjct: 195 DYIAAMEMQIRTMTAI-------LSAVSSSPPPP 217

[Close]

BLAST of CmoCh17G003650 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 6.3e-42
Identity = 111/206 (53.88%), Postives = 140/206 (67.96%), Query Frame = 0


Query: 3   SSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRL- 62
           +S  S+  R ++ S       S  +      + H +W+S+ QQ IYS+KL +AL QVRL 
Sbjct: 12  TSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKLFQALQQVRLN 71

Query: 63  -----SPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSAS- 122
                S    A +RG+AVREAADR LAV+A+GRT WSRAIL NR+KLKFRK +R R+   
Sbjct: 72  SSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMA 131

Query: 123 --------TAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEAT 182
                   ++ +NRS+K RVSVLRL  KS+P V RKVRVLGRLVPGC K+ +PVILEEAT
Sbjct: 132 IPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEAT 191

Query: 183 DYIAALEMQVRAMSALAELLSASTSA 194
           DYI ALEMQVRAM++L +LLS+  SA
Sbjct: 192 DYIQALEMQVRAMNSLVQLLSSYGSA 217

[Close]

BLAST of CmoCh17G003650 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 6.3e-42
Identity = 111/206 (53.88%), Postives = 140/206 (67.96%), Query Frame = 0


Query: 3   SSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRL- 62
           +S  S+  R ++ S       S  +      + H +W+S+ QQ IYS+KL +AL QVRL 
Sbjct: 12  TSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKLFQALQQVRLN 71

Query: 63  -----SPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSAS- 122
                S    A +RG+AVREAADR LAV+A+GRT WSRAIL NR+KLKFRK +R R+   
Sbjct: 72  SSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMA 131

Query: 123 --------TAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEAT 182
                   ++ +NRS+K RVSVLRL  KS+P V RKVRVLGRLVPGC K+ +PVILEEAT
Sbjct: 132 IPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEAT 191

Query: 183 DYIAALEMQVRAMSALAELLSASTSA 194
           DYI ALEMQVRAM++L +LLS+  SA
Sbjct: 192 DYIQALEMQVRAMNSLVQLLSSYGSA 217

[Close]

BLAST of CmoCh17G003650 vs. TAIR 10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-29
Identity = 92/203 (45.32%), Postives = 132/203 (65.02%), Query Frame = 0


Query: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQ----NQNHIK-WKSQAQQEIYSSKLVRA 60
           M  S+  + +   ESSRR+K + S       +    N+  +K WK+   Q+IY+ KLV A
Sbjct: 1   MVESLFPSIENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEA 60

Query: 61  LNQVR----LSPPNEAPR----RGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK 120
           L +VR     +  NE  +      R +R+ ADRVLA +A+G TRWSRAIL +R++ K +K
Sbjct: 61  LRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKK 120

Query: 121 PKRQRSASTAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEAT 180
            ++ + ++  GN +S+K      R++   LPAV+RK+++LGRLVPGCRK  +P +L+EAT
Sbjct: 121 HRKAKKST--GNCKSRKGLTETNRIK---LPAVERKLKILGRLVPGCRKVSVPNLLDEAT 180

Query: 181 DYIAALEMQVRAMSALAELLSAS 191
           DYIAALEMQVRAM ALAELL+A+
Sbjct: 181 DYIAALEMQVRAMEALAELLTAA 198

The following BLAST results are available for this feature:

BLAST of CmoCh17G003650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSN7	1.4e-41	54.21	Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=...	[more]
Q9C8Z9	8.8e-41	53.88	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]
O80482	2.3e-28	45.32	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]
Q9M9L6	1.7e-20	43.83	Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=...	[more]

BLAST of CmoCh17G003650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H465	1.5e-96	100.00	transcription factor bHLH147-like OS=Cucurbita moschata OX=3662 GN=LOC111460328 ...	[more]
A0A6J1L1P5	2.2e-95	99.01	transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111499053 PE...	[more]
A0A0A0KCL4	1.4e-86	94.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1	[more]
A0A1S3C760	1.2e-85	93.69	transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103497780 PE=4 S...	[more]
A0A5D3BVW3	1.2e-85	93.69	Transcription factor bHLH147-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of CmoCh17G003650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17100.1	9.7e-43	54.21	sequence-specific DNA binding transcription factors	[more]
AT3G17100.2	9.7e-43	54.21	sequence-specific DNA binding transcription factors	[more]
AT3G06590.1	6.3e-42	53.88	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.2	6.3e-42	53.88	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G09250.1	1.6e-29	45.32	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	PANTHER	PTHR33124:SF78	TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1	coord: 14..201
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 14..201
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 129..184 e-value: 2.49672E-17 score: 70.7292
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 143..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G003650.1	CmoCh17G003650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding