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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. CAAGCTTCCTTCCCCGCTGGTTATGGCGGGTACGTGCGGCTCCGCTGTCTCTTTCTCTATTCATTGCAACAAATTCGCCATTTGCAGCACCAAGCCATTGCTTTCAGTTTCAGCTTCCATTTCCATTTCATCTCGTTCGAGGCTCACAAGAAGAAAAAATCACTTGCGAATCAAAATCCTCAAAACCCTAACTAAACCTCTTACGTTCACTGTCTCTCCCATTCCTCCGCAAATCGACTCTGAAACTCCGATCGTATCGCCGGAAATCTCAGGTCCTGCAGGCGTCGAGACCGAGGTGTTATCTCCGGTGGAATGTTGCCCTTCCTCCACTTCCACGGACGGTGAATCTCGACTCTCCGAGAGCTCGGACACTGCCTCGTTGTATAACTTTGATGTTGCCAACTTTTCTTTCGGAAGTTTTGTCAGGTTTGGCGTTTACTTGCTTGCTCTTTTTGCGTTTCAGACAATCTGTACTGTGTGGGTTTTAGATTATGGTAATTCAATTAAGGAAGATAAGAACTCAGATAAAGATTTGAGTATTAGAAGCAAAAGCGTAAAAGAAGTGTTGTTGAATGGAAATGAGAGAATCGTTCTTGGAAATTTCGGGTCTAAAACGAACGAGTTGGTTTATTTGGACGAATCGAAGATGAGAGACAAAATTGAAGAGATCAGGTTGTTGGCTAGGAAAGCAAGGAAAGAGGAGAAATATCAAAAACCTGATGATTTAGGGGAGGGCGACATGGAGGGTAGAAATGTAATTTCAAGGGCTAGGATTGGTATTGATAAAGAGATTGATGCACGACTTGTTAAGTTACAGAAGAGGCTAAATTCTAACAAAGATAGGCTACCGGATTCACCTGTAAATTTTTTGTTCAAGTCTGAGAATGTTGAGGAAGCTGCCAAAAGGAATGATTTCAATGATGAAGAAGAACGGAATAAGAGTCTAATATATAAGAAAAAGTTGCAATTCAGAAACTCTAATGGTGATAGAATGAAGAAGCCTAAGGGGTTTCAAGGATTTGTTTCTAATGTTAAAAAAAGTGGCTCAAATGGCAAGGCTATTAACAAGGGAGTGAAGGATGCCGAAAAGCGAGTAGCTAACGAAATCAAGTATAACGATCCCAAGATGTTCAAAGACGATAGCACGAATTTGGGCAGCGACAAATCTGTATTGCTACAGAAAAACGATGGAACGAATTTGGATCTTGATATTAAGGGTTCGAGTTCAAAGAAGAAATCAAGTAATGGTAATGTCTCTGAATTACAAGATATTGTTTTCAATTAATTGTATTTGGATCTTGAAATGGTTGTTGTTCAGAACTTCATATTTGGTAGTTAGAACAAATAATTATGGTTTGTTTTTCAAGTTTTTAGGTGCCGTTCAGGGGACTTCTTCAGTGGAGATCTCGAAGTCACAGAATTTAAAAGATGTAGTGGAGAAAAGATCTCCTTCGAGGGCTGATTCATGGTGGATGAATCTTCCTTATGTTCTAGTAAGTTAGAAAATATACTTTGTTTTCTGTATTTATTTTCTTCTTGATGGCATGATTTTAATTTAGGAAGACACTAAGCATAATCTGTGAGATCTCACATCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAATCTCTCTCTAACACACGCGTAATGGGGAAGCCTGTAAGAGAAAGCCCATCTGCTAGCGGTGGGCTTAGGTTGTTACAAATGGTATTAGAGTCAAGACATTGAGCGATGTGCCAGTGAGGACGCTGGGCCCCCAAGGGGGTGGATTATGAGATCCCACATCGGTTAGAGGGGAACGAAGCATTACATATAAGGGTGTTGAAATCTCTCCCTAATAGACGTGTAATGGAGAAGTCCAAAAGGAAAAACCCAAAAACCTTGAGGAGAAGCCTAGAAGGGAAAGTCCAAAAAGGACAGTATCTGGATGAGTACCGGTTCCGCTGTGTAACTCTAAAAGATGCCTTTTAAAATCGTAAGGTTAATGGTGATACATAACAGGCCAAAATGGACACTATCTGCTAGCGGTGGGCTTGAGTTTGGGCTGTTACATAATTTGAATTACGAGCTTATTGTTTTAGTCGTCAATCTCAATTCAAAATTGACTAGTCACACACTTAGCATAACAAATATTTCAATGGAATTACTTAGGTTTCGTTTGATAATGCACGTTTTTGAAGTTTAGGTTTGTTTCTTCCCAATTTCCTTATCATATTTTCGTTTTTCTACCAGAAACATTTGAATTCGTAATTTACTTTTAGTTTTCAAAATTTATTAAATTTCAAAAATAAAATCCAAATCGTTATCAAATAAAACCTTAGTTCTTATTTAACCTTCTTAGAATTGCTATATGGACAAATGGTTCTATATAAACATGACTTTAGTCCGAATTCATTAGAATTTTGGATGAAAGTTAGGACCTGCGTTGGTCAATATTAATTAAATAACTAATTATGTTTCAAAGAATTATCTTTAAACCCTATGATCTTTTTTTCTTTTTGTTTAATTATAAATTTTAACATCAAAATGTATCCCATCACAGGTTATTTTTATGCATGGAGGTTCCGAAGATGAAGAACATGGAGGACTTTTCACCTTAAGGGTTCCTTCCAAGACACAGGATAGTGAGGAATATACTACATATACAGTTGCTTTTGAACACCATGTTGATGCAAATAACTTCTGTTATCTTCTGGAATCATTCTTTGAAGAGCTCGACAATTTCACAACCGACGTCGTTCCTCTGCCAACAAAAGTAAGAGTTCTAAACTTCAATATTACGATATCTAAAGTTTTCCTACTCCGATACGAAGTAAATTAGTATTTGATAAATTTCAACTTTAGGTTAAAGTGTCAACTTAGATCAAAATATTGCATAATGTTATGTCGATATTTATTTTCGTAGTTTTTGTAAGATGGTTAATTAAACTTTTTATGATTTAAATTATAATATTGTATTTAGTTGAAGAAATAAATTTGAAGGAATAATCTTGATTTAAGGAATATTTAGTTGATGTGTACGTGGTGACGATGTCGTCATACCCAAGTAGCTTAAGTTGATTTTAGTGATGAGTTTCGTTTTTCTAGTTTAACAATTGTGGGTGTGGGAGTAGATAATTGAATCATCAACGTTTTGGATGATAATTACCTAATTGGTGCTTGGATTAGCGAGTTTGTTAGTTTTTTTGTTGTTGTTCTTGACTTTTGAGATGGTAATTGTTTAATTGGTGCCTTATCAACTTAGTTATGCTTGAATTGTGGATAAGTTTGTGGTTCGTATCTGCATACCGTGTAGAACGCTTATATTCTTGCTTGGTGCTTCTTAGGAACTCGAGAAGGTCATAAAATCACATACAAGTAAAATGATTGTTGTGAAGAAGGGGCAATTGCAGCTCTATGCTGGTCAACCGTTTGCCGATGTCGAGATGGCTTTGTATGCATTAGTCGAGCGAAATGAGAATGTTATTTCTTTTCATTCGAGATAG mRNA sequence CAAGCTTCCTTCCCCGCTGGTTATGGCGGGTACGTGCGGCTCCGCTGTCTCTTTCTCTATTCATTGCAACAAATTCGCCATTTGCAGCACCAAGCCATTGCTTTCAGTTTCAGCTTCCATTTCCATTTCATCTCGTTCGAGGCTCACAAGAAGAAAAAATCACTTGCGAATCAAAATCCTCAAAACCCTAACTAAACCTCTTACGTTCACTGTCTCTCCCATTCCTCCGCAAATCGACTCTGAAACTCCGATCGTATCGCCGGAAATCTCAGGTCCTGCAGGCGTCGAGACCGAGGTGTTATCTCCGGTGGAATGTTGCCCTTCCTCCACTTCCACGGACGGTGAATCTCGACTCTCCGAGAGCTCGGACACTGCCTCGTTGTATAACTTTGATGTTGCCAACTTTTCTTTCGGAAGTTTTGTCAGGTTTGGCGTTTACTTGCTTGCTCTTTTTGCGTTTCAGACAATCTGTACTGTGTGGGTTTTAGATTATGGTAATTCAATTAAGGAAGATAAGAACTCAGATAAAGATTTGAGTATTAGAAGCAAAAGCGTAAAAGAAGTGTTGTTGAATGGAAATGAGAGAATCGTTCTTGGAAATTTCGGGTCTAAAACGAACGAGTTGGTTTATTTGGACGAATCGAAGATGAGAGACAAAATTGAAGAGATCAGGTTGTTGGCTAGGAAAGCAAGGAAAGAGGAGAAATATCAAAAACCTGATGATTTAGGGGAGGGCGACATGGAGGGTAGAAATGTAATTTCAAGGGCTAGGATTGGTATTGATAAAGAGATTGATGCACGACTTGTTAAGTTACAGAAGAGGCTAAATTCTAACAAAGATAGGCTACCGGATTCACCTGTAAATTTTTTGTTCAAGTCTGAGAATGTTGAGGAAGCTGCCAAAAGGAATGATTTCAATGATGAAGAAGAACGGAATAAGAGTCTAATATATAAGAAAAAGTTGCAATTCAGAAACTCTAATGGTGATAGAATGAAGAAGCCTAAGGGGTTTCAAGGATTTGTTTCTAATGTTAAAAAAAGTGGCTCAAATGGCAAGGCTATTAACAAGGGAGTGAAGGATGCCGAAAAGCGAGTAGCTAACGAAATCAAGTATAACGATCCCAAGATGTTCAAAGACGATAGCACGAATTTGGGCAGCGACAAATCTGTATTGCTACAGAAAAACGATGGAACGAATTTGGATCTTGATATTAAGGGTTCGAGTTCAAAGAAGAAATCAAGTAATGGTGCCGTTCAGGGGACTTCTTCAGTGGAGATCTCGAAGTCACAGAATTTAAAAGATGTAGTGGAGAAAAGATCTCCTTCGAGGGCTGATTCATGGTGGATGAATCTTCCTTATGTTCTAGTTATTTTTATGCATGGAGGTTCCGAAGATGAAGAACATGGAGGACTTTTCACCTTAAGGGTTCCTTCCAAGACACAGGATAGTGAGGAATATACTACATATACAGTTGCTTTTGAACACCATGTTGATGCAAATAACTTCTGTTATCTTCTGGAATCATTCTTTGAAGAGCTCGACAATTTCACAACCGACGTCGTTCCTCTGCCAACAAAAGAACTCGAGAAGGTCATAAAATCACATACAAGTAAAATGATTGTTGTGAAGAAGGGGCAATTGCAGCTCTATGCTGGTCAACCGTTTGCCGATGTCGAGATGGCTTTGTATGCATTAGTCGAGCGAAATGAGAATGTTATTTCTTTTCATTCGAGATAG Coding sequence (CDS) ATGGCGGGTACGTGCGGCTCCGCTGTCTCTTTCTCTATTCATTGCAACAAATTCGCCATTTGCAGCACCAAGCCATTGCTTTCAGTTTCAGCTTCCATTTCCATTTCATCTCGTTCGAGGCTCACAAGAAGAAAAAATCACTTGCGAATCAAAATCCTCAAAACCCTAACTAAACCTCTTACGTTCACTGTCTCTCCCATTCCTCCGCAAATCGACTCTGAAACTCCGATCGTATCGCCGGAAATCTCAGGTCCTGCAGGCGTCGAGACCGAGGTGTTATCTCCGGTGGAATGTTGCCCTTCCTCCACTTCCACGGACGGTGAATCTCGACTCTCCGAGAGCTCGGACACTGCCTCGTTGTATAACTTTGATGTTGCCAACTTTTCTTTCGGAAGTTTTGTCAGGTTTGGCGTTTACTTGCTTGCTCTTTTTGCGTTTCAGACAATCTGTACTGTGTGGGTTTTAGATTATGGTAATTCAATTAAGGAAGATAAGAACTCAGATAAAGATTTGAGTATTAGAAGCAAAAGCGTAAAAGAAGTGTTGTTGAATGGAAATGAGAGAATCGTTCTTGGAAATTTCGGGTCTAAAACGAACGAGTTGGTTTATTTGGACGAATCGAAGATGAGAGACAAAATTGAAGAGATCAGGTTGTTGGCTAGGAAAGCAAGGAAAGAGGAGAAATATCAAAAACCTGATGATTTAGGGGAGGGCGACATGGAGGGTAGAAATGTAATTTCAAGGGCTAGGATTGGTATTGATAAAGAGATTGATGCACGACTTGTTAAGTTACAGAAGAGGCTAAATTCTAACAAAGATAGGCTACCGGATTCACCTGTAAATTTTTTGTTCAAGTCTGAGAATGTTGAGGAAGCTGCCAAAAGGAATGATTTCAATGATGAAGAAGAACGGAATAAGAGTCTAATATATAAGAAAAAGTTGCAATTCAGAAACTCTAATGGTGATAGAATGAAGAAGCCTAAGGGGTTTCAAGGATTTGTTTCTAATGTTAAAAAAAGTGGCTCAAATGGCAAGGCTATTAACAAGGGAGTGAAGGATGCCGAAAAGCGAGTAGCTAACGAAATCAAGTATAACGATCCCAAGATGTTCAAAGACGATAGCACGAATTTGGGCAGCGACAAATCTGTATTGCTACAGAAAAACGATGGAACGAATTTGGATCTTGATATTAAGGGTTCGAGTTCAAAGAAGAAATCAAGTAATGGTGCCGTTCAGGGGACTTCTTCAGTGGAGATCTCGAAGTCACAGAATTTAAAAGATGTAGTGGAGAAAAGATCTCCTTCGAGGGCTGATTCATGGTGGATGAATCTTCCTTATGTTCTAGTTATTTTTATGCATGGAGGTTCCGAAGATGAAGAACATGGAGGACTTTTCACCTTAAGGGTTCCTTCCAAGACACAGGATAGTGAGGAATATACTACATATACAGTTGCTTTTGAACACCATGTTGATGCAAATAACTTCTGTTATCTTCTGGAATCATTCTTTGAAGAGCTCGACAATTTCACAACCGACGTCGTTCCTCTGCCAACAAAAGAACTCGAGAAGGTCATAAAATCACATACAAGTAAAATGATTGTTGTGAAGAAGGGGCAATTGCAGCTCTATGCTGGTCAACCGTTTGCCGATGTCGAGATGGCTTTGTATGCATTAGTCGAGCGAAATGAGAATGTTATTTCTTTTCATTCGAGATAG Protein sequence MAGTCGSAVSFSIHCNKFAICSTKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPLTFTVSPIPPQIDSETPIVSPEISGPAGVETEVLSPVECCPSSTSTDGESRLSESSDTASLYNFDVANFSFGSFVRFGVYLLALFAFQTICTVWVLDYGNSIKEDKNSDKDLSIRSKSVKEVLLNGNERIVLGNFGSKTNELVYLDESKMRDKIEEIRLLARKARKEEKYQKPDDLGEGDMEGRNVISRARIGIDKEIDARLVKLQKRLNSNKDRLPDSPVNFLFKSENVEEAAKRNDFNDEEERNKSLIYKKKLQFRNSNGDRMKKPKGFQGFVSNVKKSGSNGKAINKGVKDAEKRVANEIKYNDPKMFKDDSTNLGSDKSVLLQKNDGTNLDLDIKGSSSKKKSSNGAVQGTSSVEISKSQNLKDVVEKRSPSRADSWWMNLPYVLVIFMHGGSEDEEHGGLFTLRVPSKTQDSEEYTTYTVAFEHHVDANNFCYLLESFFEELDNFTTDVVPLPTKELEKVIKSHTSKMIVVKKGQLQLYAGQPFADVEMALYALVERNENVISFHSR
Homology
BLAST of CmoCh17G003130 vs. ExPASy TrEMBL
Match: A0A6J1H4L2 (uncharacterized protein LOC111460428 OS=Cucurbita moschata OX=3662 GN=LOC111460428 PE=4 SV=1) HSP 1 Score: 1088.6 bits (2814), Expect = 0.0e+00 Identity = 571/571 (100.00%), Postives = 571/571 (100.00%), Query Frame = 0
Query: 1 MAGTCGSAVSFSIHCNKFAICSTKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPL 60
MAGTCGSAVSFSIHCNKFAICSTKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPL
Sbjct: 1 MAGTCGSAVSFSIHCNKFAICSTKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPL 60
Query: 61 TFTVSPIPPQIDSETPIVSPEISGPAGVETEVLSPVECCPSSTSTDGESRLSESSDTASL 120
TFTVSPIPPQIDSETPIVSPEISGPAGVETEVLSPVECCPSSTSTDGESRLSESSDTASL
Sbjct: 61 TFTVSPIPPQIDSETPIVSPEISGPAGVETEVLSPVECCPSSTSTDGESRLSESSDTASL 120
Query: 121 YNFDVANFSFGSFVRFGVYLLALFAFQTICTVWVLDYGNSIKEDKNSDKDLSIRSKSVKE 180
YNFDVANFSFGSFVRFGVYLLALFAFQTICTVWVLDYGNSIKEDKNSDKDLSIRSKSVKE
Sbjct: 121 YNFDVANFSFGSFVRFGVYLLALFAFQTICTVWVLDYGNSIKEDKNSDKDLSIRSKSVKE 180
Query: 181 VLLNGNERIVLGNFGSKTNELVYLDESKMRDKIEEIRLLARKARKEEKYQKPDDLGEGDM 240
VLLNGNERIVLGNFGSKTNELVYLDESKMRDKIEEIRLLARKARKEEKYQKPDDLGEGDM
Sbjct: 181 VLLNGNERIVLGNFGSKTNELVYLDESKMRDKIEEIRLLARKARKEEKYQKPDDLGEGDM 240
Query: 241 EGRNVISRARIGIDKEIDARLVKLQKRLNSNKDRLPDSPVNFLFKSENVEEAAKRNDFND 300
EGRNVISRARIGIDKEIDARLVKLQKRLNSNKDRLPDSPVNFLFKSENVEEAAKRNDFND
Sbjct: 241 EGRNVISRARIGIDKEIDARLVKLQKRLNSNKDRLPDSPVNFLFKSENVEEAAKRNDFND 300
Query: 301 EEERNKSLIYKKKLQFRNSNGDRMKKPKGFQGFVSNVKKSGSNGKAINKGVKDAEKRVAN 360
EEERNKSLIYKKKLQFRNSNGDRMKKPKGFQGFVSNVKKSGSNGKAINKGVKDAEKRVAN
Sbjct: 301 EEERNKSLIYKKKLQFRNSNGDRMKKPKGFQGFVSNVKKSGSNGKAINKGVKDAEKRVAN 360
Query: 361 EIKYNDPKMFKDDSTNLGSDKSVLLQKNDGTNLDLDIKGSSSKKKSSNGAVQGTSSVEIS 420
EIKYNDPKMFKDDSTNLGSDKSVLLQKNDGTNLDLDIKGSSSKKKSSNGAVQGTSSVEIS
Sbjct: 361 EIKYNDPKMFKDDSTNLGSDKSVLLQKNDGTNLDLDIKGSSSKKKSSNGAVQGTSSVEIS 420
Query: 421 KSQNLKDVVEKRSPSRADSWWMNLPYVLVIFMHGGSEDEEHGGLFTLRVPSKTQDSEEYT 480
KSQNLKDVVEKRSPSRADSWWMNLPYVLVIFMHGGSEDEEHGGLFTLRVPSKTQDSEEYT
Sbjct: 421 KSQNLKDVVEKRSPSRADSWWMNLPYVLVIFMHGGSEDEEHGGLFTLRVPSKTQDSEEYT 480
Query: 481 TYTVAFEHHVDANNFCYLLESFFEELDNFTTDVVPLPTKELEKVIKSHTSKMIVVKKGQL 540
TYTVAFEHHVDANNFCYLLESFFEELDNFTTDVVPLPTKELEKVIKSHTSKMIVVKKGQL
Sbjct: 481 TYTVAFEHHVDANNFCYLLESFFEELDNFTTDVVPLPTKELEKVIKSHTSKMIVVKKGQL 540
Query: 541 QLYAGQPFADVEMALYALVERNENVISFHSR 572
QLYAGQPFADVEMALYALVERNENVISFHSR
Sbjct: 541 QLYAGQPFADVEMALYALVERNENVISFHSR 571
BLAST of CmoCh17G003130 vs. ExPASy TrEMBL
Match: A0A6J1KXF0 (uncharacterized protein LOC111499077 OS=Cucurbita maxima OX=3661 GN=LOC111499077 PE=4 SV=1) HSP 1 Score: 1010.4 bits (2611), Expect = 3.0e-291 Identity = 534/571 (93.52%), Postives = 548/571 (95.97%), Query Frame = 0
Query: 1 MAGTCGSAVSFSIHCNKFAICSTKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPL 60
MAGTCGSAVSFSIHCNKF ICSTKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKP
Sbjct: 1 MAGTCGSAVSFSIHCNKFTICSTKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPP 60
Query: 61 TFTVSPIPPQIDSETPIVSPEISGPAGVETEVLSPVECCPSSTSTDGESRLSESSDTASL 120
FTVSPIPPQIDSETPIV PEISG AGVETEVLSPVECCPSST+TDGESRLSESSDTASL
Sbjct: 61 PFTVSPIPPQIDSETPIVLPEISGSAGVETEVLSPVECCPSSTTTDGESRLSESSDTASL 120
Query: 121 YNFDVANFSFGSFVRFGVYLLALFAFQTICTVWVLDYGNSIKEDKNSDKDLSIRSKSVKE 180
NFDVANFS GSFVRFGVYLLALFAFQTICTVWVLDYGNSIKEDKNSDKDLSIRSKS KE
Sbjct: 121 LNFDVANFSLGSFVRFGVYLLALFAFQTICTVWVLDYGNSIKEDKNSDKDLSIRSKSGKE 180
Query: 181 VLLNGNERIVLGNFGSKTNELVYLDESKMRDKIEEIRLLARKARKEEKYQKPDDLGEGDM 240
VLLNGNERIVLGNFGSKTNELVYLDESKMRDKIEEIRLLARKARKEEKYQKPDD+GEGD
Sbjct: 181 VLLNGNERIVLGNFGSKTNELVYLDESKMRDKIEEIRLLARKARKEEKYQKPDDVGEGDT 240
Query: 241 EGRNVISRARIGIDKEIDARLVKLQKRLNSNKDRLPDSPVNFLFKSENVEEAAKRNDFND 300
EG NVISRARIGIDKEIDARLV+LQKRLNSNK+R+PDSPVNFLFKSENVEEAAKRNDFND
Sbjct: 241 EGSNVISRARIGIDKEIDARLVRLQKRLNSNKERIPDSPVNFLFKSENVEEAAKRNDFND 300
Query: 301 EEERNKSLIYKKKLQFRNSNGDRMKKPKGFQGFVSNVKKSGSNGKAINKGVKDAEKRVAN 360
EEERNKSLIYKKKLQFRNSNGDRMKKP GFQGFVSN KKSGSNGKAINKGVKDAEKRVAN
Sbjct: 301 EEERNKSLIYKKKLQFRNSNGDRMKKPMGFQGFVSNGKKSGSNGKAINKGVKDAEKRVAN 360
Query: 361 EIKYNDPKMFKDDSTNLGSDKSVLLQKNDGTNLDLDIKGSSSKKKSSNGAVQGTSSVEIS 420
EIKYNDPKM KDDSTNLGSDKSVL+QKNDGTNLD D+K SSSKKKSSNGAVQ TSSVEIS
Sbjct: 361 EIKYNDPKMSKDDSTNLGSDKSVLVQKNDGTNLDFDMKVSSSKKKSSNGAVQETSSVEIS 420
Query: 421 KSQNLKDVVEKRSPSRADSWWMNLPYVLVIFMHGGSEDEEHGGLFTLRVPSKTQDSEEYT 480
KS +LKDV+EKRSPSRAD WWMNLPYVLVIFMH GSEDEEHGGLFTLR+PSKT+D EEYT
Sbjct: 421 KSPDLKDVMEKRSPSRADLWWMNLPYVLVIFMHRGSEDEEHGGLFTLRIPSKTRDIEEYT 480
Query: 481 TYTVAFEHHVDANNFCYLLESFFEELDNFTTDVVPLPTKELEKVIKSHTSKMIVVKKGQL 540
TYTVAFEHHVDANNFCYLLESFFEELD FTTDV+PLPTKELE VIKSHTSK+IVVKKGQL
Sbjct: 481 TYTVAFEHHVDANNFCYLLESFFEELDTFTTDVIPLPTKELE-VIKSHTSKIIVVKKGQL 540
Query: 541 QLYAGQPFADVEMALYALVERNENVISFHSR 572
QLYAGQPF+DVEMALYALVERNENVIS HSR
Sbjct: 541 QLYAGQPFSDVEMALYALVERNENVISLHSR 570
BLAST of CmoCh17G003130 vs. ExPASy TrEMBL
Match: A0A1S3C7D7 (uncharacterized protein LOC103497853 OS=Cucumis melo OX=3656 GN=LOC103497853 PE=4 SV=1) HSP 1 Score: 736.5 bits (1900), Expect = 8.5e-209 Identity = 413/603 (68.49%), Postives = 478/603 (79.27%), Query Frame = 0
Query: 1 MAGTCGSAVSFSIHCNKFAICSTKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPL 60
MAGT GS ++ S+ NKF IC+ KPLLSVS+SISISSRS+L RKNHLRIKILKTLT+P
Sbjct: 1 MAGTYGSTIALSLPSNKFTICTPKPLLSVSSSISISSRSKLRTRKNHLRIKILKTLTRPP 60
Query: 61 TFTVSPIPPQIDSETPIVSPEISGPAGVETEVLSPVECCPSSTSTDGESRLSESSDTASL 120
F++SPIPP+ S PIVSP SGP VETEVLSP E CPS STDGESRLSESS TASL
Sbjct: 61 PFSLSPIPPETQSPIPIVSPGTSGPVDVETEVLSPAESCPS--STDGESRLSESSSTASL 120
Query: 121 YNFDVANFSFGSFVRFGVYLLALFAFQTICTVWVLDYGNSIKEDKNSDKDLSIRSKSVKE 180
+NFDVA FS+GSFV+ GVY LA+FAFQTICTVWVL+YG+S KED +S++DLS+R S +E
Sbjct: 121 FNFDVAKFSWGSFVKLGVYFLAVFAFQTICTVWVLEYGSSSKEDTSSNEDLSVRRNSGRE 180
Query: 181 VLLNGNERIVLGNFGSKTNELVYLDESKMRDKIEEIRLLARKARKEEKYQKPDDLGEGDM 240
VLLNGNERI LGN GSK N+LVYL+E+KMR+KIEEIR +AR AR EEK ++ DD GE DM
Sbjct: 181 VLLNGNERIGLGNVGSKRNKLVYLEETKMREKIEEIRSMARAARIEEKNKRSDDFGEDDM 240
Query: 241 EGRNVISRARIGIDKEIDARLVKLQKRLNSNKDRLPDSPVNFLFKSENVEEAAKRNDFND 300
EG N ISRARI I+KE+DARLVKL+KRLNS+K+++P S +N+L KSENVE+A +RN FN
Sbjct: 241 EGGNAISRARIDIEKEVDARLVKLEKRLNSSKEKIPGSSMNYLLKSENVEDAVERNSFNG 300
Query: 301 EEERNKSLIYKKKLQFRNSNGDRMKKPKGFQGFVSNVKKSGSNGKAI----------NKG 360
EER+KSL++KKK+++RNS+ R+KKPKGFQGFVSN KKSGSNGK G
Sbjct: 301 -EERDKSLMFKKKMRYRNSSSHRIKKPKGFQGFVSNGKKSGSNGKGTTVGGANFVVDKMG 360
Query: 361 VKDAEKRVANEIKYNDPKMFKDDSTNLGSDKSVLLQKNDGTNLDLDIKGSSSKKKSSNGA 420
VKD EKRV N+I + +MF+DD T+ ++ VL ++ND TNLDL IK SSSK K SNG
Sbjct: 361 VKDTEKRVGNKIMDSVSEMFEDDGTSFARNELVLPEENDKTNLDLGIKASSSKNKPSNGV 420
Query: 421 VQGTSSVEISKSQNLKDVVEKRSPS-----------------------RADSWWMNLPYV 480
VQ TSSV ISKSQNLKDVVEK S S +AD WW+NLPYV
Sbjct: 421 VQETSSVVISKSQNLKDVVEKSSSSASSVDSVEKKSKAGEDRRKQSNKKADLWWLNLPYV 480
Query: 481 LVIFMHGGSEDEEHGGLFTLRVPSKTQDSEEYTTYTVAFEHHVDANNFCYLLESFFEELD 540
LVI M GS DEE GLFT+R+PS TQD EE +TYTVAFE+HVDANNFC+LLESFF+ELD
Sbjct: 481 LVIVMRQGS-DEELDGLFTIRIPSATQDIEE-STYTVAFENHVDANNFCFLLESFFDELD 540
Query: 541 NFTTDVVPLPTKELEKVIKSHTSKMIVVKKGQLQLYAGQPFADVEMALYALVERNENVIS 571
NFTTDVVPLPTKELEKVIKSHTSKMIVVKKGQLQLYAGQPFADVEMALY+LVERNENVIS
Sbjct: 541 NFTTDVVPLPTKELEKVIKSHTSKMIVVKKGQLQLYAGQPFADVEMALYSLVERNENVIS 598
BLAST of CmoCh17G003130 vs. ExPASy TrEMBL
Match: A0A0A0KCV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G306300 PE=4 SV=1) HSP 1 Score: 708.8 bits (1828), Expect = 1.9e-200 Identity = 396/602 (65.78%), Postives = 471/602 (78.24%), Query Frame = 0
Query: 1 MAGTCGSAVSFSIHCNKFAICSTKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPL 60
MAGT G +SFS+ NKF IC+ KPLLSVS+SISISSRS+L RKNHLRIKILKTL +P
Sbjct: 1 MAGTYGCTISFSLPSNKFTICTAKPLLSVSSSISISSRSKLRTRKNHLRIKILKTLNRPP 60
Query: 61 TFTVSPIPPQIDSETPIVSPEISGPAGVETEVLSPVECCPSSTSTDGESRLSESSDTASL 120
F++SPIPP+ TPIVSP SGP VETEVLSP E CPS STDGESRLSESS+ ASL
Sbjct: 61 PFSLSPIPPETQPPTPIVSPGTSGPVDVETEVLSPAESCPS--STDGESRLSESSNIASL 120
Query: 121 YNFDVANFSFGSFVRFGVYLLALFAFQTICTVWVLDYGNSIKEDKNSDKDLSIRSKSVKE 180
+NFDVA FS+GSFV+ GVYLLA+FAFQTICTVWVL+YG+SIKEDK+S++DLS+R K +E
Sbjct: 121 FNFDVAKFSWGSFVKLGVYLLAVFAFQTICTVWVLEYGSSIKEDKSSNEDLSVRRKGGRE 180
Query: 181 VLLNGNERIVLGNFGSKTNELVYLDESKMRDKIEEIRLLARKARKEEKYQKPDDLGEGDM 240
VLLNGNE VLGNFGSK N+ VYL+E+KMR+KIEEIRL+AR AR EEK + DD + DM
Sbjct: 181 VLLNGNEGNVLGNFGSKRNKSVYLEETKMREKIEEIRLMARAARIEEKNKMSDDFEDDDM 240
Query: 241 EGRNVISRARIGIDKEIDARLVKLQKRLNSNKDRLPDSPVNFLFKSENVEEAAKRNDFND 300
EG N ISRARIGI+KE+DARLVKL+KRLNS K+++ S +N+L KSE+VE+A +RN FN
Sbjct: 241 EGGNAISRARIGIEKEVDARLVKLEKRLNSAKEKISGSSMNYLLKSEHVEDAVERNSFNG 300
Query: 301 EEERNKSLIYKKKLQFRNSNGDRMKKPKGFQGFVSNVKKSGSNGKAI---------NKGV 360
EERN+SL+YKKK+++R+S+ R+KKP+GFQGFVSN +KSGSN K GV
Sbjct: 301 -EERNESLMYKKKMKYRDSSSHRIKKPEGFQGFVSNGRKSGSNDKGATVEGANIVDKMGV 360
Query: 361 KDAEKRVANEIKYNDPKMFKDDSTNLGSDKSVLLQKNDGTNLDLDIKGSSSKKKSSNGAV 420
KD EKRV N+I + ++F+DD TN ++ VL QKNDGTNLD+ K SSSK K SNG V
Sbjct: 361 KDTEKRVGNKIMDSVSEIFEDDGTNSARNELVLPQKNDGTNLDIGTKASSSKNKLSNGVV 420
Query: 421 QGTSSVEISKSQNLKDVVEKRSPS-----------------------RADSWWMNLPYVL 480
Q SSV ISKSQNLK+ ++ RS S +AD WW+NLPYVL
Sbjct: 421 Q-ESSVVISKSQNLKNAMKNRSSSASSVDSVEKKSKAGEDRRKQSNKKADLWWLNLPYVL 480
Query: 481 VIFMHGGSEDEEHGGLFTLRVPSKTQDSEEYTTYTVAFEHHVDANNFCYLLESFFEELDN 540
+I M GS+ EE GLFTL+VPS TQD EE +TY VAFE+HVDANNFCYLLES+FEEL+N
Sbjct: 481 IIVMRQGSDGEELDGLFTLKVPSATQDIEE-STYAVAFENHVDANNFCYLLESYFEELEN 540
Query: 541 FTTDVVPLPTKELEKVIKSHTSKMIVVKKGQLQLYAGQPFADVEMALYALVERNENVISF 571
FTTDV+PLPTKELEK IKS+T KMIVVKKGQLQLYAGQPFADVEMALY+L+E+NENVI+
Sbjct: 541 FTTDVIPLPTKELEKFIKSNTRKMIVVKKGQLQLYAGQPFADVEMALYSLIEQNENVIAL 597
BLAST of CmoCh17G003130 vs. ExPASy TrEMBL
Match: A0A6J1CBL8 (uncharacterized protein LOC111009728 OS=Momordica charantia OX=3673 GN=LOC111009728 PE=4 SV=1) HSP 1 Score: 689.9 bits (1779), Expect = 9.1e-195 Identity = 400/606 (66.01%), Postives = 461/606 (76.07%), Query Frame = 0
Query: 1 MAGTCGSAVSFSIHCNKFAICSTKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPL 60
MAGT GSAVSFSI N+FAI TKPLL VSASIS SS S+LTRRKNHLRIKILKTLTKP
Sbjct: 1 MAGTYGSAVSFSIPRNQFAIYRTKPLLLVSASISPSSPSKLTRRKNHLRIKILKTLTKPS 60
Query: 61 TFTVSPIPPQI---DSETPIVSPEISGPAGVETEVLSPVECCPSSTSTDGESRLSESSDT 120
FTV+PI P + DS I S EISGPAGVETEV SP ECCPSST+ DGESRLSE S+T
Sbjct: 61 PFTVTPILPNLPPTDSALQIESSEISGPAGVETEVSSPAECCPSSTTVDGESRLSEGSNT 120
Query: 121 ASLYNFDVANFSFGSFVRFGVYLLALFAFQTICTVWVLDYGNSIKEDKNSDKDLSIRSKS 180
ASL NFDVANFS+GSF+RFGVY LA+FAFQTICTVWVL YGNSIKED NSD+ S++SKS
Sbjct: 121 ASLLNFDVANFSWGSFLRFGVYFLAIFAFQTICTVWVLGYGNSIKEDNNSDEGSSLKSKS 180
Query: 181 VKEVLLNGNERIVLGNFGSKTNELVYLDESKMRDKIEEIRLLARKARKEEKYQKPDDLGE 240
+EVLLNGNERIV GNFGSK ++LVYL+ESKMR+KIEEIR +AR+ARKEEK + DD G
Sbjct: 181 RREVLLNGNERIVHGNFGSKASKLVYLEESKMREKIEEIRSMAREARKEEKSKISDDFGN 240
Query: 241 GDMEGRNVISRARIGIDKEIDARLVKLQKRLNSNKDRLPDSPVNFLFKSENVEEAAKRND 300
E RNVISRA+IGI+KE+D+RLVKLQKRLNS ++R+P+SPV++L KS+NV+E +R+D
Sbjct: 241 DGTEDRNVISRAKIGIEKEVDSRLVKLQKRLNSTRERIPESPVSYLLKSDNVDEEVERDD 300
Query: 301 FNDEEERNKSLIYKKKLQFRNSNGDRMKKPKGFQGFVSNVKKSGSNGKAI---------- 360
N EE+ NKSLI+KKKL++RNS+GDRMKKPKGFQGFVSN KK GSN K
Sbjct: 301 LNGEEQ-NKSLIFKKKLKYRNSSGDRMKKPKGFQGFVSNGKKGGSNSKGTTTRDAKFNDD 360
Query: 361 NKGVKDAEKRVANEIKYNDPKMFKDDSTNLGSDKSVLLQKNDGTNLDLDIKGSSSKKKSS 420
N GVKDAEKRV EIK + MF +D+SVL ++D + IKG K K +
Sbjct: 361 NVGVKDAEKRVDKEIKESVSAMF--------NDESVLQPRSDRKTSETKIKG--LKNKPN 420
Query: 421 NGAVQGTSSVEISKSQNLKDVVEKRSPS------------------------RADSWWMN 480
NG Q TSS E SKSQN +D+ K PS AD WW+N
Sbjct: 421 NGVFQETSSAEKSKSQNSRDLGVKMPPSVGQNDSFAGKKSKAHEGRSKQSNKEADLWWLN 480
Query: 481 LPYVLVIFMHGGSEDEEHGGLFTLRVPSKTQDSEEYTTYTVAFEHHVDANNFCYLLESFF 540
LPYVLVIFMH GS+DEE GLFTL++PSK++D+ E +TYTVAFE DANNFCYLLESFF
Sbjct: 481 LPYVLVIFMHRGSDDEELDGLFTLKIPSKSRDTGE-STYTVAFEDRADANNFCYLLESFF 540
Query: 541 EELDNFTTDVVPLPTKELEKVIKSHTSKMIVVKKGQLQLYAGQPFADVEMALYALVERNE 570
EEL NFT D+VPL TKELEKV +T+K+IVVKKGQLQLY GQPFADVEMAL+ALVERNE
Sbjct: 541 EELGNFTADIVPLATKELEKV---NTNKIIVVKKGQLQLYVGQPFADVEMALHALVERNE 591
BLAST of CmoCh17G003130 vs. TAIR 10
Match: AT4G15820.1 (BEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast hits to 443 proteins in 102 species: Archae - 0; Bacteria - 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink). ) HSP 1 Score: 174.5 bits (441), Expect = 2.5e-43 Identity = 153/482 (31.74%), Postives = 228/482 (47.30%), Query Frame = 0
Query: 87 GVETEVLSPVECCPSSTSTDGESRLSESSDTASLYNFDVANFSFGSFVRFGVYLLALFAF 146
G+ET P S E ++ SS ++ N S ++G++L+ +FAF
Sbjct: 39 GIETPENDPSSDVVSDVE---EIQVLSSSVVSNEVNGISTKISPKLVAKYGLWLIGIFAF 98
Query: 147 QTICTVWVLDYGNSIKEDKNSDKDLSIRSKSVKEVLLNGNERIVLGNFGSKTNELVYLDE 206
QT+C V L G+S K +K + + S+ N LV L++
Sbjct: 99 QTVCAVLFL--GDSTKSEKTPEV-----------------------SSDSEGNNLVLLED 158
Query: 207 SKMRDKIEEIRLLARKARKEEKYQKPDDLGEGDMEGRNVISRARIGIDKEIDARLVKLQK 266
+M +KI EIR++AR+ARK E Q+ DD I I+KEI+ARL ++K
Sbjct: 159 VEMNEKIAEIRMMAREARKSEGKQEEDD-------------ETGIDIEKEIEARLSNMEK 218
Query: 267 RLNSNKDRLPDSPVNFLFKSENVEEAAKRNDFNDEEERNKSLIYKKKLQFRNSNGDRMKK 326
RLNS + L V L +S N E KSL+++KK +F+ + M
Sbjct: 219 RLNSQRKGLAGLRVEPLDESGNDE---------------KSLMFEKKYKFK-AEKPPMGN 278
Query: 327 PKGFQG------FVSNVKKSGSNGKAINKGVKDAEKRVANEIKYNDPKMFKDDSTNLGSD 386
KGF G +S +K+G NG A +D EK +++ +F+D +
Sbjct: 279 VKGFGGSKGSDEIMSGTEKTGKNGSASES--RDGEKNPEEQLQ---ESVFRDGAAQESEQ 338
Query: 387 KSVLLQKNDGTNLDLDIKGSSSKKKSSNGAVQGTSSV--EISKSQNLKDVVEKRSPSRAD 446
+ + + G+ + K S S ++ K + L+ EK+S
Sbjct: 339 RRPSNEVKKSRKSGNRVGGTPNMKAGSGFGSTSLSEKHGDVRKGKPLRRAKEKQSEKENK 398
Query: 447 SWWMNLPYVLVIFMHGGSEDEEHGGLFTLRVPSKTQDSEEYTTYTVAFEHHVDANNFCYL 506
WW+ LPYVL I M + + G FTLR S Q +E ++ +AFE DA NF YL
Sbjct: 399 LWWLKLPYVLRILMRSNIDQDISEGYFTLRTESMEQ-NEGQVSHMIAFEDQSDARNFSYL 457
Query: 507 LESFFEELDNFTTDVVPLPTKELEKVIKSHTSKMIVVKKGQLQLYAGQPFADVEMALYAL 561
LES FE+LD+F+ D+ P+ TK+L + S +IVV+K QL LYAGQPF DVE AL L
Sbjct: 459 LESVFEDLDDFSADIAPVTTKDLYDEVSSGGKNVIVVRKRQLTLYAGQPFEDVERALRTL 457
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1H4L2 | 0.0e+00 | 100.00 | uncharacterized protein LOC111460428 OS=Cucurbita moschata OX=3662 GN=LOC1114604... | [more] |
| A0A6J1KXF0 | 3.0e-291 | 93.52 | uncharacterized protein LOC111499077 OS=Cucurbita maxima OX=3661 GN=LOC111499077... | [more] |
| A0A1S3C7D7 | 8.5e-209 | 68.49 | uncharacterized protein LOC103497853 OS=Cucumis melo OX=3656 GN=LOC103497853 PE=... | [more] |
| A0A0A0KCV3 | 1.9e-200 | 65.78 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G306300 PE=4 SV=1 | [more] |
| A0A6J1CBL8 | 9.1e-195 | 66.01 | uncharacterized protein LOC111009728 OS=Momordica charantia OX=3673 GN=LOC111009... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G15820.1 | 2.5e-43 | 31.74 | BEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G6178... | [more] |
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR021503 | Protein of unknown function DUF3110 | PFAM | PF11360 | DUF3110 | coord: 458..540
e-value: 4.5E-4
score: 20.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 395..430 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 395..423 |
| None | No IPR available | PANTHER | PTHR34962:SF3 | ABC SUBFAMILY C PROTEIN | coord: 1..416 |
| None | No IPR available | PANTHER | PTHR34962 | EMBRYO DEFECTIVE 1703-RELATED | coord: 1..416 |
| None | No IPR available | PANTHER | PTHR34962:SF3 | ABC SUBFAMILY C PROTEIN | coord: 402..562 |
| None | No IPR available | PANTHER | PTHR34962 | EMBRYO DEFECTIVE 1703-RELATED | coord: 402..562 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
|
