CmoCh17G003110 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATCTCACGCGTTTCTGCTCTCATTGCTGCGTTCGCCGTTCTCGCCGCTCATTTTCTGATCTTATCGGCAGCGGCCATCGATTTCTCCGGCGACAACGAGATTCTCTTTGCTCCGACTAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTTCTCGCTGGAAACGATGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGACTCTGAAATCAATCGCCGAATTCTAGCGACTACTCGCTACATCAGCTATGGTGCTCTGAGGAGGAACAACGTTCCTTGCTCCCGCCGCGGCGCTTCTTACTACAACTGCCGTCCAGGCGCTCAGGCGAATCCTTACACCCGTGGTTGTAGCGCCATTACTCGCTGCCGAAGTTAA ATGGGTATCTCACGCGTTTCTGCTCTCATTGCTGCGTTCGCCGTTCTCGCCGCTCATTTTCTGATCTTATCGGCAGCGGCCATCGATTTCTCCGGCGACAACGAGATTCTCTTTGCTCCGACTAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTTCTCGCTGGAAACGATGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGACTCTGAAATCAATCGCCGAATTCTAGCGACTACTCGCTACATCAGCTATGGTGCTCTGAGGAGGAACAACGTTCCTTGCTCCCGCCGCGGCGCTTCTTACTACAACTGCCGTCCAGGCGCTCAGGCGAATCCTTACACCCGTGGTTGTAGCGCCATTACTCGCTGCCGAAGTTAA ATGGGTATCTCACGCGTTTCTGCTCTCATTGCTGCGTTCGCCGTTCTCGCCGCTCATTTTCTGATCTTATCGGCAGCGGCCATCGATTTCTCCGGCGACAACGAGATTCTCTTTGCTCCGACTAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTTCTCGCTGGAAACGATGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGACTCTGAAATCAATCGCCGAATTCTAGCGACTACTCGCTACATCAGCTATGGTGCTCTGAGGAGGAACAACGTTCCTTGCTCCCGCCGCGGCGCTTCTTACTACAACTGCCGTCCAGGCGCTCAGGCGAATCCTTACACCCGTGGTTGTAGCGCCATTACTCGCTGCCGAAGTTAA MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS Homology
BLAST of CmoCh17G003110 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 2.9e-34 Identity = 83/138 (60.14%), Postives = 98/138 (71.01%), Query Frame = 0
BLAST of CmoCh17G003110 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.9e-33 Identity = 76/113 (67.26%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of CmoCh17G003110 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 2.9e-29 Identity = 68/113 (60.18%), Postives = 80/113 (70.80%), Query Frame = 0
BLAST of CmoCh17G003110 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 8.6e-26 Identity = 60/85 (70.59%), Postives = 66/85 (77.65%), Query Frame = 0
BLAST of CmoCh17G003110 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 7.3e-25 Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 0
BLAST of CmoCh17G003110 vs. ExPASy TrEMBL
Match: A0A6J1H3W7 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111460267 PE=3 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.8e-63 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CmoCh17G003110 vs. ExPASy TrEMBL
Match: A0A6J1KVY0 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 8.6e-61 Identity = 123/127 (96.85%), Postives = 123/127 (96.85%), Query Frame = 0
BLAST of CmoCh17G003110 vs. ExPASy TrEMBL
Match: A0A6J1C9N4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 3.4e-49 Identity = 102/127 (80.31%), Postives = 113/127 (88.98%), Query Frame = 0
BLAST of CmoCh17G003110 vs. ExPASy TrEMBL
Match: A0A6J1KG89 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111494831 PE=3 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.3e-48 Identity = 96/127 (75.59%), Postives = 115/127 (90.55%), Query Frame = 0
BLAST of CmoCh17G003110 vs. ExPASy TrEMBL
Match: A0A6J1EV64 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111436882 PE=3 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.2e-48 Identity = 96/127 (75.59%), Postives = 116/127 (91.34%), Query Frame = 0
BLAST of CmoCh17G003110 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 ) HSP 1 Score: 146.0 bits (367), Expect = 2.1e-35 Identity = 83/138 (60.14%), Postives = 98/138 (71.01%), Query Frame = 0
BLAST of CmoCh17G003110 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 ) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-34 Identity = 76/113 (67.26%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of CmoCh17G003110 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 ) HSP 1 Score: 117.9 bits (294), Expect = 6.1e-27 Identity = 60/85 (70.59%), Postives = 66/85 (77.65%), Query Frame = 0
BLAST of CmoCh17G003110 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 ) HSP 1 Score: 114.8 bits (286), Expect = 5.2e-26 Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 0
BLAST of CmoCh17G003110 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 ) HSP 1 Score: 88.6 bits (218), Expect = 4.0e-18 Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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